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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr9 | genome | chr9:544576..547102 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO09G01750.1 vs.
Match: EWM27606.1 (Inorganic phosphate transporter Pho88 [Nannochloropsis gaditana]) HSP 1 Score: 340.9 bits (873), Expect = 7.100e-90 Identity = 211/344 (61.34%), Postives = 244/344 (70.93%), Query Frame = 0
Query: 1 MGSPRGGIVSTAGCSTKTNNSSRRRTS----------FMVLLLVIVGAVLTTTQARPAADVGSS-RPPSS--TAARKRAALLKATSSSKKKQPKRDDEDES-TGSSKLDRMPIVAAAAKRSKKR-----------RSSSASLEEDDPDVIPFLASTRVKRGSALTSSGAGGVLATLAKRAGKALVASSAFRFVAEEKLFETVIGMLAYRVAFQWSKDTTALKKARLLFTLYICLYLGALLYSRQQAIELQDTRTLKVAAMPAMLSSFFDVAKKLKKGEGMGEAGVGGLMGGLQGLASPQEKEMTFKEYDLGQVKSALDRFSMFLVGMTFLHFKMKNTYMIMYWG 320
MG+ RG AGCS S +TS M+LLL++ LT T AR A +VG S PSS T+ RKRA L SSKK +P+ D+ + T SK+ RM +A ++ R RSS+ASLEE DPDVIPFLASTR KRG ALTS G GG+L TLA+RAGKALV SSAFRFVAEEK+FETV GMLAYR+AFQWSKD+TA +KARLLFTLY+CLYLGALLYSRQQAI QD RTLKVAA+PA+LSS D+AKK+KKGE G + GL GLA PQEKEMTF++YDLGQ+K+ALDRFS+FLVGMTFLHFKMKNTYMIMYWG
Sbjct: 1 MGTFRGESALAAGCSKTQEGRSTTKTSRPTHPHKISKIMLLLLILAAMTLTATHARSATEVGGSGATPSSPTTSGRKRALL-----SSKKNEPQDDEAKPTPTRKSKMSRMAGSPSARRKRAPRGKQDFATLSSSRSSTASLEE-DPDVIPFLASTRFKRGEALTSQGGGGLLFTLARRAGKALVGSSAFRFVAEEKIFETVAGMLAYRIAFQWSKDSTATRKARLLFTLYVCLYLGALLYSRQQAIAQQDARTLKVAAVPAVLSSLLDMAKKMKKGESPGG------LPGLAGLARPQEKEMTFRDYDLGQIKAALDRFSLFLVGMTFLHFKMKNTYMIMYWG 332
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO09G01750.1 ID=NO09G01750.1|Name=NO09G01750.1|organism=Nannochloropsis oceanica|type=mRNA|length=1935bp
CCACATTTTCTGACAGGCACTGAAGGCTTGTGGTTTTGCCAAAATATGGG
CTCCCCAAGAGGAGGAATCGTCTCCACCGCAGGTTGCAGCACGAAGACGA
ACAACAGCAGTCGACGACGGACCAGCTTCATGGTGCTGCTCCTGGTGATC
GTGGGGGCCGTGCTGACAACAACACAAGCAAGACCAGCTGCAGATGTGGG
GAGCAGCAGGCCACCATCTTCTACAGCGGCCAGGAAACGCGCAGCATTGC
TCAAGGCCACCTCAAGTAGCAAGAAGAAGCAGCCCAAACGCGACGACGAA
GATGAATCAACAGGCTCTTCCAAGCTCGACCGCATGCCAATAGTCGCCGC
TGCCGCCAAGCGCAGCAAAAAACGTCGTTCTTCCTCCGCCTCCCTAGAAG
AGGACGACCCGGATGTCATCCCTTTCTTGGCCAGCACTCGCGTTAAACGT
GGAAGTGCCCTCACTTCTTCCGGTGCTGGTGGAGTATTGGCCACCCTCGC
TAAGAGGGCAGGCAAGGCATTGGTGGCTTCTTCTGCCTTTCGCTTCGTTG
CAGAAGAGAAGCTGTTTGAGACGGTCATCGGTATGCTCGCCTACCGGGTC
GCATTCCAATGGAGCAAAGACACCACGGCCTTGAAGAAGGCTCGGTTGTT
ATTCACGTTGTACATATGCTTGTATTTGGGTGCCCTGCTATATTCTAGAC
AGCAGGCTATCGAGCTGCAGGACACACGAACATTGAAGGTAGCGGCCATG
CCAGCCATGCTTTCTTCCTTCTTCGACGTGGCAAAGAAGCTGAAAAAGGG
CGAGGGGATGGGAGAAGCCGGAGTCGGTGGTCTTATGGGAGGCCTGCAGG
GACTGGCTTCCCCACAAGAGAAGGAGATGACGTTTAAGGAGTATGATTTG
GGACAGGTCAAGAGCGCCCTGGACCGTTTTTCCATGTTCTTGGTGGGGAT
GACGTTTTTGCATTTCAAGATGAAGAACACGTACATGATTATGTACTGGG
GAATCCTCGGGCCTATCATGATGCTGCGCGAGCCATTGTTTCAAGTACAT
ATTTTTGGGATGGAGGAAACGGGAATAAGGCTGAGGCCATTTGGGCCGAA
GGACGAGCCTGAGGAAGTGGAGGATGGGGAGGGGGAGGAAGGTGGGGAGG
AGGGGGCAGAGACGGTCAAGGGGGAAGGAGGAGATGAGGAGGGGAGGGGG
GACGAAGAGGCAGGGGAGGAAGCGGAGCCCGGGGCAACGGAGGAGGAAGA
GGAGGAGGAGGAGGAGGAGGAAGTTGAAAAAGAAGAAGAAGAAGAAGAAG
AAGAAGAGGAAGAGGAGGGAGAAGAAATAGAAGAGGAAGACATAGGAGAA
GAGCTAGAGGAGGAGGTGGTTGAAGTGGAGGAGGAGGACGAGGGGGAAGA
GGAGGAGAAAGAAGAAGAAGAAGAAGAGGAAGTCCCCGTTCGAAATAAGG
CGGAGGGGGGCGAAGGGAAGGAGGGTGACATTGCGAGTGATCATGCCCTG
AAGGAGCACCCGGGGCAATTCCGGGTGAAGAAATTGGAGGAAGACGTGCA
TCCCCATGCGGGGGACAAGAAGAGTGATATGACCCCGTCGGAGTTTTGTG
TGGAGAAGGAGGAGTAGGGAGAGAGGGAGGGAGGGAGGGAGGGAGGGCAC
AGGACGGTCTGTTTTTGTTTTTTTAAGAAGGACAAGGAATGGGGGCCTGT
GCATAACAATGGTAAGAAGAACAAGGCGAAGGAGGCGAAGGAGGAGAGAA
TGAATAGGGATAAGAACAAGCTTGCTTCATCGATAAATTGGAGAATTTTA
AAAACGTGAGGACGTGAGGGATGGCGAGGGAAAAATAAGAAATAACGTCT
CAGCTTTGATTGCCCCACGCAGATTAGGATCCTTCCCGCCAAAAGAAACA
ACGACTCGAAGAAAAGGAAAAATATCTGACGGAAG back to topprotein sequence of NO09G01750.1 >NO09G01750.1-protein ID=NO09G01750.1-protein|Name=NO09G01750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=524bp
MGSPRGGIVSTAGCSTKTNNSSRRRTSFMVLLLVIVGAVLTTTQARPAAD
VGSSRPPSSTAARKRAALLKATSSSKKKQPKRDDEDESTGSSKLDRMPIV
AAAAKRSKKRRSSSASLEEDDPDVIPFLASTRVKRGSALTSSGAGGVLAT
LAKRAGKALVASSAFRFVAEEKLFETVIGMLAYRVAFQWSKDTTALKKAR
LLFTLYICLYLGALLYSRQQAIELQDTRTLKVAAMPAMLSSFFDVAKKLK
KGEGMGEAGVGGLMGGLQGLASPQEKEMTFKEYDLGQVKSALDRFSMFLV
GMTFLHFKMKNTYMIMYWGILGPIMMLREPLFQVHIFGMEETGIRLRPFG
PKDEPEEVEDGEGEEGGEEGAETVKGEGGDEEGRGDEEAGEEAEPGATEE
EEEEEEEEEVEKEEEEEEEEEEEEGEEIEEEDIGEELEEEVVEVEEEDEG
EEEEKEEEEEEEVPVRNKAEGGEGKEGDIASDHALKEHPGQFRVKKLEED
VHPHAGDKKSDMTPSEFCVEKEE* back to topmRNA from alignment at chr9:544576..547102- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO09G01750.1 ID=NO09G01750.1|Name=NO09G01750.1|organism=Nannochloropsis oceanica|type=mRNA|length=2527bp|location=Sequence derived from alignment at chr9:544576..547102- (Nannochloropsis oceanica)
CCACATTTTCTGACAGGCACTGAAGGCTTGTGGTTTTGCCAAAATATGGG
CTCCCCAAGAGGAGGAATCGTCTCCACCGCAGGTTGCAGCACGAAGACGA
ACAACAGCAGTCGACGACGGACCAGCTTCATGGTGCTGCTCCTGGTGATC
GTGGGGGCCGTGCTGACAACAACACAAGCAAGACCAGCTGCAGATGTGGG
GAGCAGCAGGCCACCATCTTCTACAGCGGCCAGGAAACGCGCAGCATTGC
TCAAGGCCACCTCAAGTAGCAAGGTGAGTATGGGGAGATATGACGCACAT
TTTTGGGTGAAAAGGATGCCAACCTGATGAGACAGGAATGCTCGAGATGA
TAGAGATGAGCGCGAGCAAGCTTTCTGCCTCGGATGATTGGGTCGTCCAG
CAGTTGCGTCACGAGCCTCGAATGCCTGGTGCAGGCATGAATGTTCGTTC
TCACGCTATGGCTCACTTCTCTTTCCACCGCTACTTGTTTCTATACTTTG
TTATCCCATCTATGATGCCTTCAATTGCTTGTACATGTTGATAACTACTT
GCTTTGGCGGGATCGGTGTTTCTCAGCGCTCCAGGAGGCGCGCCACACTT
GCGCTTCTGACTTCCCACCACCATCCCATTGCCTAGCTAACTCCTTTTCC
CTCTCCCCCCGTCGTATTCGCAGAAGAAGCAGCCCAAACGCGACGACGAA
GATGAATCAACAGGCTCTTCCAAGCTCGACCGCATGCCAATAGTCGCCGC
TGCCGCCAAGCGCAGCAAAAAACGTCGTTCTTCCTCCGCCTCCCTAGAAG
AGGACGACCCGGATGTCATCCCTTTCTTGGCCAGCACTCGCGTTAAACGT
GGAAGTGCCCTCACTTCTTCCGGTGCTGGTGGAGTATTGGCCACCCTCGC
TAAGAGGGCAGGCAAGGCATTGGTGGCTTCTTCTGCCTTTCGCTTCGTTG
CAGAAGAGAAGCTGTTTGAGACGGTCATCGGTATGCTCGCCTACCGGGTC
GCATTCCAATGGAGCAAAGACACCACGGCCTTGAAGAAGGCTCGGTTGTT
ATTCACGTTGTACATATGCTTGTATTTGGGTGCCCTGCTATATTCTAGAC
AGCAGGCTATCGAGCTGCAGGACACACGAACATTGAAGGTAGCGGCCATG
CCAGCCATGCTTTCTTCCTTCTTCGACGTGGCAAAGAAGCTGAAAAAGGG
CGAGGGGATGGGAGAAGCCGGAGTCGGTGGTCTTATGGGAGGCCTGCAGG
GACTGGCTTCCCCACAAGAGAAGGAGATGACGTTTAAGGAGTATGATTTG
GGACAGGTCAAGAGCGCCCTGGACCGTTTTTCCATGTTCTTGGTGGGGAT
GACGTTTTTGCATTTCAAGATGAAGAACACGTACATGATTATGTACTGGG
GGTGCGTCTGTTTGTGTTTGTCCCTCCCTTCACCCTCCCTCCCTCCCTCC
CTCCCTCTCTCTCCCTTCCTTCCCCCATGCTCTCCTTCATCCATCCCTCT
CCCTCCATCCTCCCCTCTTGCCTTCCATGTGAGATCGGTCCGTCCTCTCA
CACCTCATCCTATTTTCCTTCCTTACTCCCCCCTTCATCTTAGAATCCTC
GGGCCTATCATGATGCTGCGCGAGCCATTGTTTCAAGTACATATTTTTGG
GATGGAGGAAACGGGAATAAGGCTGAGGCCATTTGGGCCGAAGGACGAGC
CTGAGGAAGTGGAGGATGGGGAGGGGGAGGAAGGTGGGGAGGAGGGGGCA
GAGACGGTCAAGGGGGAAGGAGGAGATGAGGAGGGGAGGGGGGACGAAGA
GGCAGGGGAGGAAGCGGAGCCCGGGGCAACGGAGGAGGAAGAGGAGGAGG
AGGAGGAGGAGGAAGTTGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAG
GAAGAGGAGGGAGAAGAAATAGAAGAGGAAGACATAGGAGAAGAGCTAGA
GGAGGAGGTGGTTGAAGTGGAGGAGGAGGACGAGGGGGAAGAGGAGGAGA
AAGAAGAAGAAGAAGAAGAGGAAGTCCCCGTTCGAAATAAGGCGGAGGGG
GGCGAAGGGAAGGAGGGTGACATTGCGAGTGATCATGCCCTGAAGGAGCA
CCCGGGGCAATTCCGGGTGAAGAAATTGGAGGAAGACGTGCATCCCCATG
CGGGGGACAAGAAGAGTGATATGACCCCGTCGGAGTTTTGTGTGGAGAAG
GAGGAGTAGGGAGAGAGGGAGGGAGGGAGGGAGGGAGGGCACAGGACGGT
CTGTTTTTGTTTTTTTAAGAAGGACAAGGAATGGGGGCCTGTGCATAACA
ATGGTAAGAAGAACAAGGCGAAGGAGGCGAAGGAGGAGAGAATGAATAGG
GATAAGAACAAGCTTGCTTCATCGATAAATTGGAGAATTTTAAAAACGTG
AGGACGTGAGGGATGGCGAGGGAAAAATAAGAAATAACGTCTCAGCTTTG
ATTGCCCCACGCAGATTAGGATCCTTCCCGCCAAAAGAAACAACGACTCG
AAGAAAAGGAAAAATATCTGACGGAAG back to topCoding sequence (CDS) from alignment at chr9:544576..547102- >NO09G01750.1 ID=NO09G01750.1|Name=NO09G01750.1|organism=Nannochloropsis oceanica|type=CDS|length=1572bp|location=Sequence derived from alignment at chr9:544576..547102- (Nannochloropsis oceanica)
ATGGGCTCCCCAAGAGGAGGAATCGTCTCCACCGCAGGTTGCAGCACGAA
GACGAACAACAGCAGTCGACGACGGACCAGCTTCATGGTGCTGCTCCTGG
TGATCGTGGGGGCCGTGCTGACAACAACACAAGCAAGACCAGCTGCAGAT
GTGGGGAGCAGCAGGCCACCATCTTCTACAGCGGCCAGGAAACGCGCAGC
ATTGCTCAAGGCCACCTCAAGTAGCAAGAAGAAGCAGCCCAAACGCGACG
ACGAAGATGAATCAACAGGCTCTTCCAAGCTCGACCGCATGCCAATAGTC
GCCGCTGCCGCCAAGCGCAGCAAAAAACGTCGTTCTTCCTCCGCCTCCCT
AGAAGAGGACGACCCGGATGTCATCCCTTTCTTGGCCAGCACTCGCGTTA
AACGTGGAAGTGCCCTCACTTCTTCCGGTGCTGGTGGAGTATTGGCCACC
CTCGCTAAGAGGGCAGGCAAGGCATTGGTGGCTTCTTCTGCCTTTCGCTT
CGTTGCAGAAGAGAAGCTGTTTGAGACGGTCATCGGTATGCTCGCCTACC
GGGTCGCATTCCAATGGAGCAAAGACACCACGGCCTTGAAGAAGGCTCGG
TTGTTATTCACGTTGTACATATGCTTGTATTTGGGTGCCCTGCTATATTC
TAGACAGCAGGCTATCGAGCTGCAGGACACACGAACATTGAAGGTAGCGG
CCATGCCAGCCATGCTTTCTTCCTTCTTCGACGTGGCAAAGAAGCTGAAA
AAGGGCGAGGGGATGGGAGAAGCCGGAGTCGGTGGTCTTATGGGAGGCCT
GCAGGGACTGGCTTCCCCACAAGAGAAGGAGATGACGTTTAAGGAGTATG
ATTTGGGACAGGTCAAGAGCGCCCTGGACCGTTTTTCCATGTTCTTGGTG
GGGATGACGTTTTTGCATTTCAAGATGAAGAACACGTACATGATTATGTA
CTGGGGAATCCTCGGGCCTATCATGATGCTGCGCGAGCCATTGTTTCAAG
TACATATTTTTGGGATGGAGGAAACGGGAATAAGGCTGAGGCCATTTGGG
CCGAAGGACGAGCCTGAGGAAGTGGAGGATGGGGAGGGGGAGGAAGGTGG
GGAGGAGGGGGCAGAGACGGTCAAGGGGGAAGGAGGAGATGAGGAGGGGA
GGGGGGACGAAGAGGCAGGGGAGGAAGCGGAGCCCGGGGCAACGGAGGAG
GAAGAGGAGGAGGAGGAGGAGGAGGAAGTTGAAAAAGAAGAAGAAGAAGA
AGAAGAAGAAGAGGAAGAGGAGGGAGAAGAAATAGAAGAGGAAGACATAG
GAGAAGAGCTAGAGGAGGAGGTGGTTGAAGTGGAGGAGGAGGACGAGGGG
GAAGAGGAGGAGAAAGAAGAAGAAGAAGAAGAGGAAGTCCCCGTTCGAAA
TAAGGCGGAGGGGGGCGAAGGGAAGGAGGGTGACATTGCGAGTGATCATG
CCCTGAAGGAGCACCCGGGGCAATTCCGGGTGAAGAAATTGGAGGAAGAC
GTGCATCCCCATGCGGGGGACAAGAAGAGTGATATGACCCCGTCGGAGTT
TTGTGTGGAGAAGGAGGAGTAG back to top
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