NO09G01460, NO09G01460 (gene) Nannochloropsis oceanica

Overview
NameNO09G01460
Unique NameNO09G01460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1002
Alignment locationchr9:466720..467721 +

Link to JBrowse

Properties
Property NameValue
DescriptiontRNA (guanine-N(7)-)-methyltransferase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:466720..467721 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008176tRNA (guanine-N7-)-methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006400tRNA modification
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR003358tRNA_(Gua-N-7)_MeTrfase_Trmb
Homology
BLAST of NO09G01460 vs. NCBI_GenBank
Match: WP_019641312.1 (tRNA (guanosine(46)-N7)-methyltransferase TrmB [Thioalkalivibrio sp. ALSr1])

HSP 1 Score: 147.5 bits (371), Expect = 7.300e-32
Identity = 96/283 (33.92%), Postives = 142/283 (50.18%), Query Frame = 0
Query:   46 NPRRSPAERKRLRNLQKRPGWYRRVSRWVGKGTKKRIRELWPRYGIEPPGWQVKMDIPALFAPDREVRTVVVDVGFGDGATLVTKALELQELAPEVGFMGCEWHSASVGGALTRMNETAVENVRMLRGDFLHHLRAGWFAPGALDEVCIFFPDPWPRPEDHERRVINAVSVGHLAGCVKPGGFLHVATDVRDYAAWVGKVMEGDGGNWEACAVPKESVLYRSPSQDGVEDGPHYHHGLEEVEAIYGLLEARPRWRPLTRYESRGIHELEHKIYDLCYRRKYIP 329
            +P ++PA  +R+R+  +R G        +  G ++ + ELWPR+G++P      +D+ A+F  +     V +++GFGDG +L  +A      APE  F+G E H   VG  L  +    + N+R+   D +  L A   AP +LD V +FFPDPW +   H+RR+I    V  LAG ++PGG+LH+ATD  DYA  + +VM G    W A                   DGP     +   E        RP WRP T++E RG+ +  H + DL YRR   P
Sbjct:    6 DPSQAPAHHRRVRSFVRREG-------RLTTGQQRALEELWPRFGLDPAPDAGVLDLAAVFGRE---APVTLEIGFGDGDSLAEQA----AAAPERDFIGTEVHRPGVGHLLGEIERRGLTNLRVSDRDAVELLEA-HLAPASLDTVQVFFPDPWHKKRHHKRRLIQPGFVRALAGWIRPGGWLHLATDWADYAEHMQEVMAG-ATEWFA------------------PDGP-----VPRAE--------RPAWRPETKFERRGL-QRGHAVADLVYRRTDAP 240          
BLAST of NO09G01460 vs. NCBI_GenBank
Match: WP_019590536.1 (tRNA (guanosine(46)-N7)-methyltransferase TrmB [Thioalkalivibrio sp. ALE20])

HSP 1 Score: 147.1 bits (370), Expect = 9.500e-32
Identity = 95/278 (34.17%), Postives = 138/278 (49.64%), Query Frame = 0
Query:   51 PAERKRLRNLQKRPGWYRRVSRWVGKGTKKRIRELWPRYGIEPPGWQVKMDIPALFAPDREVRTVVVDVGFGDGATLVTKALELQELAPEVGFMGCEWHSASVGGALTRMNETAVENVRMLRGDFLHHLRAGWFAPGALDEVCIFFPDPWPRPEDHERRVINAVSVGHLAGCVKPGGFLHVATDVRDYAAWVGKVMEGDGGNWEACAVPKESVLYRSPSQDGVEDGPHYHHGLEEVEAIYGLLEARPRWRPLTRYESRGIHELEHKIYDLCYRRKYIP 329
            PA  +R+R+  +R G        +  G ++ + ELWPR+G++P      +D+ A+F  +     V +++GFGDG +L  +A      APE  F+G E H   VG  L  +    + N+R+   D +  L A  FAPG+LD V ++FPDPW +   H+RR+I    V  LAG ++PGG+LH+ATD  DYA  + +VM G    W A               DG    P                  RP WRP T++E RG+ +  H + DL YRR   P
Sbjct:   20 PAHHRRVRSFVRREG-------RLTTGQQRALDELWPRFGLDPAPDAGVLDLAAVFGRE---APVTLEIGFGDGDSLAEQA----AAAPERDFIGTEVHRPGVGHLLGEIERRGLTNLRVSDRDAVELLEA-HFAPGSLDTVQVYFPDPWHKKRHHKRRLIQPGFVRALAGWIRPGGWLHLATDWADYAEHMQEVMAG-ATEWFA--------------PDGPVPRPE-----------------RPAWRPETKFERRGL-QRGHAVADLVYRRTEAP 249          
BLAST of NO09G01460 vs. NCBI_GenBank
Match: WP_018947129.1 (tRNA (guanosine(46)-N7)-methyltransferase TrmB [Thioalkalivibrio sp. AKL17])

HSP 1 Score: 146.4 bits (368), Expect = 1.600e-31
Identity = 94/278 (33.81%), Postives = 138/278 (49.64%), Query Frame = 0
Query:   51 PAERKRLRNLQKRPGWYRRVSRWVGKGTKKRIRELWPRYGIEPPGWQVKMDIPALFAPDREVRTVVVDVGFGDGATLVTKALELQELAPEVGFMGCEWHSASVGGALTRMNETAVENVRMLRGDFLHHLRAGWFAPGALDEVCIFFPDPWPRPEDHERRVINAVSVGHLAGCVKPGGFLHVATDVRDYAAWVGKVMEGDGGNWEACAVPKESVLYRSPSQDGVEDGPHYHHGLEEVEAIYGLLEARPRWRPLTRYESRGIHELEHKIYDLCYRRKYIP 329
            PA  +R+R+  +R G        +  G ++ + ELWPR+G++P      +D+ A+F  +     V +++GFGDG +L  +A      AP+  F+G E H   VG  L  +    + N+R+   D +  L A  FAPG+LD V ++FPDPW +   H+RR+I    V  LAG ++PGG+LH+ATD  DYA  + +VM G    W A               DG    P                  RP WRP T++E RG+ +  H + DL YRR   P
Sbjct:   20 PAHHRRVRSFVRREG-------RLTTGQQRALDELWPRFGLDPAPDAGALDLAAVFGRE---APVTLEIGFGDGDSLAEQA----AAAPDRDFIGTEVHRPGVGHLLGEIERRGLTNLRVSDRDAVELLEA-HFAPGSLDTVQVYFPDPWHKKRHHKRRLIQPGFVRALAGWIRPGGWLHLATDWADYAEHMQEVMAG-ATEWFA--------------PDGPVPRPE-----------------RPAWRPETKFERRGL-QRGHAVADLVYRRTEAP 249          
BLAST of NO09G01460 vs. NCBI_GenBank
Match: WP_019021548.1 (tRNA (guanosine(46)-N7)-methyltransferase TrmB [Thioalkalivibrio sp. ALE23])

HSP 1 Score: 145.6 bits (366), Expect = 2.800e-31
Identity = 94/278 (33.81%), Postives = 137/278 (49.28%), Query Frame = 0
Query:   51 PAERKRLRNLQKRPGWYRRVSRWVGKGTKKRIRELWPRYGIEPPGWQVKMDIPALFAPDREVRTVVVDVGFGDGATLVTKALELQELAPEVGFMGCEWHSASVGGALTRMNETAVENVRMLRGDFLHHLRAGWFAPGALDEVCIFFPDPWPRPEDHERRVINAVSVGHLAGCVKPGGFLHVATDVRDYAAWVGKVMEGDGGNWEACAVPKESVLYRSPSQDGVEDGPHYHHGLEEVEAIYGLLEARPRWRPLTRYESRGIHELEHKIYDLCYRRKYIP 329
            PA  +R+R+  +R G        +  G ++ + ELWPR+G++P      +D+ A+F  +     V +++GFGDG +L  +A      APE  F+G E H   VG  L  +    + N+R+   D +  L A  FAP +LD V ++FPDPW +   H+RR+I    V  LAG ++PGG+LH+ATD  DYA  + +VM G    W A               DG    P                  RP WRP T++E RG+ +  H + DL YRR   P
Sbjct:   20 PAHHRRVRSFVRREG-------RLTTGQQRALDELWPRFGLDPAPDAGVLDLAAVFGRE---APVTLEIGFGDGDSLAEQA----AAAPERDFIGTEVHRPGVGHLLAEIERRGLTNLRVSDRDAVELLEA-HFAPASLDTVQVYFPDPWHKKRHHKRRLIQPGFVRALAGWIRPGGWLHLATDWADYAEHMQEVMAG-ATEWFA--------------PDGPVPRPE-----------------RPAWRPETKFERRGL-QRGHAVADLVYRRTEAP 249          
BLAST of NO09G01460 vs. NCBI_GenBank
Match: WP_019570613.1 (tRNA (guanosine(46)-N7)-methyltransferase TrmB [Thioalkalivibrio sp. ALE11])

HSP 1 Score: 145.6 bits (366), Expect = 2.800e-31
Identity = 94/278 (33.81%), Postives = 138/278 (49.64%), Query Frame = 0
Query:   51 PAERKRLRNLQKRPGWYRRVSRWVGKGTKKRIRELWPRYGIEPPGWQVKMDIPALFAPDREVRTVVVDVGFGDGATLVTKALELQELAPEVGFMGCEWHSASVGGALTRMNETAVENVRMLRGDFLHHLRAGWFAPGALDEVCIFFPDPWPRPEDHERRVINAVSVGHLAGCVKPGGFLHVATDVRDYAAWVGKVMEGDGGNWEACAVPKESVLYRSPSQDGVEDGPHYHHGLEEVEAIYGLLEARPRWRPLTRYESRGIHELEHKIYDLCYRRKYIP 329
            PA  +R+R+  +R G        +  G ++ + ELWPR+G++P      +D+ A+F  +     V +++GFGDG +L  +A      APE  F+G E H   VG  L  +    + N+R+   D +  L A  FAPG+LD V ++FPDPW +   H+RR+I    V  LAG ++PGG+LH+ATD  DYA  + +V+ G    W A               DG    P                  RP WRP T++E RG+ +  H + DL YRR   P
Sbjct:   20 PAHHRRVRSFVRREG-------RLTTGQQRALDELWPRFGLDPAPDAGVLDLAAVFGRE---APVTLEIGFGDGDSLAEQA----AAAPERDFIGTEVHRPGVGHLLGEIERRGLTNLRVSDRDAVELLEA-HFAPGSLDTVQVYFPDPWHKKRHHKRRLIQPGFVRALAGWIRPGGWLHLATDWADYAEHMQEVVAG-ATEWFA--------------PDGPVPRPE-----------------RPAWRPETKFERRGL-QRGHAVADLVYRRTEAP 249          
BLAST of NO09G01460 vs. NCBI_GenBank
Match: WP_012971906.1 (tRNA (guanosine(46)-N7)-methyltransferase TrmB [Allochromatium vinosum] >ADC63638.1 tRNA (guanine-N(7)-)-methyltransferase [Allochromatium vinosum DSM 180])

HSP 1 Score: 145.2 bits (365), Expect = 3.600e-31
Identity = 99/290 (34.14%), Postives = 141/290 (48.62%), Query Frame = 0
Query:   39 DLEEEDVNPRRSPAERKR--LRNLQKRPGWYRRVSRWVGKGTKKRIRELWPRYGIE-PPGWQVKMDIPALFAPDREVRTVVVDVGFGDGATLVTKALELQELAPEVGFMGCEWHSASVGGALTRMNETAVENVRMLRGDFLHHLRAGWFAPGALDEVCIFFPDPWPRPEDHERRVINAVSVGHLAGCVKPGGFLHVATDVRDYAAWVGKVMEGDGGNWEACAVPKESVLYRSPSQDGVEDGPHYHHGLEEVEAIYGLLEARPRWRPLTRYESRGIHELEHKIYDLCYRRK 326
            D    + +P   P +R R  +R+   R G        +    ++   ELWPR+G++  PG  V +D+ ALF  D   R VV+++GFG+G +L     E+ E  PE  ++G E H   VG  L  +    + N+R++R D +  LR G   PGALD V +FFPDPWP+   H+RR+++   V  LA  ++PGG  H ATD   YA  + +V+                        DG  D       L E  A  G    RP  RPLT++E RG   L H + DL YRR+
Sbjct:    6 DRRSPEADPPSDPGDRPRRAIRSFVLREG-------RLTAAQERAFSELWPRFGVDWTPG--VPLDLAALFGND---RPVVLEIGFGNGESLA----EMAERDPERNWLGIEVHRPGVGHLLLEIERRGLSNLRVMRHDAIEVLREG-IEPGALDTVQLFFPDPWPKKRHHKRRILSPALVELLARVIRPGGIFHAATDWAHYAEQMLEVL------------------------DGAAD-------LFENTAGAGAYAPRPANRPLTKFEQRG-ERLGHPVADLIYRRR 246          
BLAST of NO09G01460 vs. NCBI_GenBank
Match: WP_018869025.1 (tRNA (guanosine(46)-N7)-methyltransferase TrmB [Thioalkalivibrio sp. ALgr3])

HSP 1 Score: 145.2 bits (365), Expect = 3.600e-31
Identity = 94/278 (33.81%), Postives = 137/278 (49.28%), Query Frame = 0
Query:   51 PAERKRLRNLQKRPGWYRRVSRWVGKGTKKRIRELWPRYGIEPPGWQVKMDIPALFAPDREVRTVVVDVGFGDGATLVTKALELQELAPEVGFMGCEWHSASVGGALTRMNETAVENVRMLRGDFLHHLRAGWFAPGALDEVCIFFPDPWPRPEDHERRVINAVSVGHLAGCVKPGGFLHVATDVRDYAAWVGKVMEGDGGNWEACAVPKESVLYRSPSQDGVEDGPHYHHGLEEVEAIYGLLEARPRWRPLTRYESRGIHELEHKIYDLCYRRKYIP 329
            PA  +R+R+  +R G        +  G ++ + ELWPR+G++P      +D+ A+F  +     V +++GFGDG +L  +A      APE  F+G E H   VG  L  +    + N+R+   D +  L A  FAP +LD V ++FPDPW +   H+RR+I    V  LAG ++PGG+LH+ATD  DYA  + +VM G    W A               DG    P                  RP WRP T++E RG+ +  H + DL YRR   P
Sbjct:   20 PAHHRRVRSFVRREG-------RLTTGQQRALDELWPRFGLDPAPDDGVLDLAAVFGRE---APVTLEIGFGDGDSLAEQA----AAAPERDFIGTEVHRPGVGHLLGEIERRGLTNLRVSDRDAVELLEA-HFAPASLDTVQVYFPDPWHKKRHHKRRLIQPGFVRALAGWIRPGGWLHLATDWADYAEHMQEVMAG-ATEWFA--------------PDGPVPRPE-----------------RPAWRPETKFERRGL-QRGHAVADLVYRRTEAP 249          
BLAST of NO09G01460 vs. NCBI_GenBank
Match: WP_028491451.1 (tRNA (guanosine(46)-N7)-methyltransferase TrmB [Thioalkalivibrio sp. ALE19])

HSP 1 Score: 144.8 bits (364), Expect = 4.700e-31
Identity = 93/278 (33.45%), Postives = 137/278 (49.28%), Query Frame = 0
Query:   51 PAERKRLRNLQKRPGWYRRVSRWVGKGTKKRIRELWPRYGIEPPGWQVKMDIPALFAPDREVRTVVVDVGFGDGATLVTKALELQELAPEVGFMGCEWHSASVGGALTRMNETAVENVRMLRGDFLHHLRAGWFAPGALDEVCIFFPDPWPRPEDHERRVINAVSVGHLAGCVKPGGFLHVATDVRDYAAWVGKVMEGDGGNWEACAVPKESVLYRSPSQDGVEDGPHYHHGLEEVEAIYGLLEARPRWRPLTRYESRGIHELEHKIYDLCYRRKYIP 329
            PA  +R+R+  +R G        +  G ++ + ELWPR+G++P      +D+ A+F  +     V +++GFGDG +L  +A      APE  F+G E H   VG  L  +    + N+R+   D +  L A  FAP +LD V ++FPDPW +   H+RR++    V  LAG ++PGG+LH+ATD  DYA  + +VM G    W A               DG    P                  RP WRP T++E RG+ +  H + DL YRR   P
Sbjct:   20 PAHHRRVRSFVRREG-------RLTTGQQRALDELWPRFGLDPAPDAGALDLAAVFGRE---APVTLEIGFGDGDSLAEQA----AAAPERDFIGTEVHRPGVGHLLGEIERRGLTNLRVSDRDAVELLEA-HFAPASLDTVQVYFPDPWHKKRHHKRRLVQPRFVRALAGWIRPGGWLHLATDWADYAEHMQEVMAG-ATEWFA--------------PDGPVPRPE-----------------RPAWRPETKFERRGL-QRGHAVADLVYRRTEAP 249          
BLAST of NO09G01460 vs. NCBI_GenBank
Match: WP_019592893.1 (tRNA (guanosine(46)-N7)-methyltransferase TrmB [Thioalkalivibrio sp. ALE18])

HSP 1 Score: 144.1 bits (362), Expect = 8.100e-31
Identity = 94/278 (33.81%), Postives = 137/278 (49.28%), Query Frame = 0
Query:   51 PAERKRLRNLQKRPGWYRRVSRWVGKGTKKRIRELWPRYGIEPPGWQVKMDIPALFAPDREVRTVVVDVGFGDGATLVTKALELQELAPEVGFMGCEWHSASVGGALTRMNETAVENVRMLRGDFLHHLRAGWFAPGALDEVCIFFPDPWPRPEDHERRVINAVSVGHLAGCVKPGGFLHVATDVRDYAAWVGKVMEGDGGNWEACAVPKESVLYRSPSQDGVEDGPHYHHGLEEVEAIYGLLEARPRWRPLTRYESRGIHELEHKIYDLCYRRKYIP 329
            PA  +R+R+  +R G        +  G ++ + ELWPR+G++P      +D+ A+F  +     V +++GFGDG +L  +A      APE  F+G E H   VG  L  +    + N+R+   D +  L A  FAP +LD V ++FPDPW +   H+RR+I    V  LAG ++PGG+LH+ATD  DYA  + +VM G    W A               DG    P                  RP WRP T++E RG+ +  H + DL YRR   P
Sbjct:   20 PAHHRRVRSFVRREG-------RLTTGQQRALDELWPRFGLDPAPDAGVLDLAAVFGRE---APVTLEIGFGDGDSLAEQA----AAAPERDFIGTEVHRPGVGHLLGEIERRGLTNLRVSDRDAVELLEA-HFAPASLDTVQVYFPDPWHKKRHHKRRLIQPGFVRALAGWMRPGGWLHLATDWADYAEHMQEVMAG-ATEWFA--------------PDGPVPRPE-----------------RPAWRPETKFERRGL-QRGHAVADLVYRRTEAP 249          
BLAST of NO09G01460 vs. NCBI_GenBank
Match: WP_024329596.1 (MULTISPECIES: tRNA (guanosine(46)-N7)-methyltransferase TrmB [Thioalkalivibrio] >OOC11248.1 tRNA (guanine(46)-N(7))-methyltransferase [Thioalkalivibrio halophilus])

HSP 1 Score: 144.1 bits (362), Expect = 8.100e-31
Identity = 93/278 (33.45%), Postives = 137/278 (49.28%), Query Frame = 0
Query:   51 PAERKRLRNLQKRPGWYRRVSRWVGKGTKKRIRELWPRYGIEPPGWQVKMDIPALFAPDREVRTVVVDVGFGDGATLVTKALELQELAPEVGFMGCEWHSASVGGALTRMNETAVENVRMLRGDFLHHLRAGWFAPGALDEVCIFFPDPWPRPEDHERRVINAVSVGHLAGCVKPGGFLHVATDVRDYAAWVGKVMEGDGGNWEACAVPKESVLYRSPSQDGVEDGPHYHHGLEEVEAIYGLLEARPRWRPLTRYESRGIHELEHKIYDLCYRRKYIP 329
            PA  +R+R+  +R G        +  G ++ + ELWPR+G++P      +D+ A+F  +     V +++GFGDG +L  +A      AP+  F+G E H   VG  L  +    + N+R+   D +  L A  FAP +LD V ++FPDPW +   H+RR+I    V  LAG ++PGG+LH+ATD  DYA  + +VM G    W A               DG    P                  RP WRP T++E RG+ +  H + DL YRR   P
Sbjct:   20 PAHHRRVRSFVRREG-------RLTTGQQRALDELWPRFGLDPAPDAGMLDLAAVFGRE---APVTLEIGFGDGDSLAEQA----AAAPDRDFIGTEVHRPGVGHLLGEIERRGLTNLRVSDRDAVELLEA-HFAPASLDTVQVYFPDPWHKKRHHKRRLIQPGFVRALAGWIRPGGWLHLATDWADYAEHMQEVMAG-ATEWFA--------------PDGPVPRPE-----------------RPAWRPETKFERRGL-QRGHAVADLVYRRTEAP 249          
The following BLAST results are available for this feature:
BLAST of NO09G01460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_019641312.17.300e-3233.92tRNA (guanosine(46)-N7)-methyltransferase TrmB [Th... [more]
WP_019590536.19.500e-3234.17tRNA (guanosine(46)-N7)-methyltransferase TrmB [Th... [more]
WP_018947129.11.600e-3133.81tRNA (guanosine(46)-N7)-methyltransferase TrmB [Th... [more]
WP_019021548.12.800e-3133.81tRNA (guanosine(46)-N7)-methyltransferase TrmB [Th... [more]
WP_019570613.12.800e-3133.81tRNA (guanosine(46)-N7)-methyltransferase TrmB [Th... [more]
WP_012971906.13.600e-3134.14tRNA (guanosine(46)-N7)-methyltransferase TrmB [Al... [more]
WP_018869025.13.600e-3133.81tRNA (guanosine(46)-N7)-methyltransferase TrmB [Th... [more]
WP_028491451.14.700e-3133.45tRNA (guanosine(46)-N7)-methyltransferase TrmB [Th... [more]
WP_019592893.18.100e-3133.81tRNA (guanosine(46)-N7)-methyltransferase TrmB [Th... [more]
WP_024329596.18.100e-3133.45MULTISPECIES: tRNA (guanosine(46)-N7)-methyltransf... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010638NSK010638Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01460.1NO09G01460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589013gene_4408Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01460.1NO09G01460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01460 ID=NO09G01460|Name=NO09G01460|organism=Nannochloropsis oceanica|type=gene|length=1002bp
ATGCGTGAACCACCGTCCCCACAGGAGGATAGCGCAGCCCTTATGTGTAC
ATCATCGAACCAGGAGCAGGGAGATGACTGGAAAGCAACAACGATCGCGA
TGATGGAGGGACTAGATTTGGAGGAGGAAGACGTCAACCCCAGACGTTCC
CCGGCGGAACGAAAGCGGCTGCGCAACTTACAAAAGAGGCCTGGGTGGTA
CCGCCGTGTCTCGCGGTGGGTGGGTAAGGGCACGAAAAAGCGCATCCGAG
AGCTTTGGCCACGGTACGGGATAGAGCCTCCGGGCTGGCAAGTTAAGATG
GACATTCCGGCCCTCTTTGCGCCGGACCGCGAGGTGCGAACGGTGGTGGT
AGATGTGGGGTTTGGAGACGGGGCAACCCTTGTGACCAAGGCCTTGGAGC
TACAAGAATTAGCGCCCGAAGTGGGATTCATGGGCTGTGAGTGGCATTCT
GCCAGTGTTGGGGGAGCCTTGACGAGGATGAATGAAACGGCGGTGGAAAA
TGTGCGAATGTTGCGTGGTGATTTCCTGCACCACTTACGGGCTGGTTGGT
TCGCACCCGGGGCTTTAGACGAGGTTTGCATCTTTTTCCCGGACCCGTGG
CCAAGGCCTGAAGATCACGAGCGGCGGGTCATAAATGCTGTGTCGGTGGG
ACATTTGGCGGGGTGTGTGAAGCCTGGAGGGTTTCTACATGTCGCAACCG
ACGTGCGGGATTACGCAGCGTGGGTTGGGAAGGTGATGGAAGGAGATGGG
GGCAATTGGGAGGCATGTGCTGTCCCGAAGGAGAGTGTTTTGTACCGAAG
TCCGTCCCAGGATGGGGTGGAGGACGGGCCGCATTATCATCACGGATTGG
AGGAGGTGGAGGCGATATACGGGTTGCTTGAGGCACGCCCACGGTGGCGG
CCTTTGACGAGGTATGAAAGTCGAGGAATTCACGAATTAGAGCATAAGAT
TTACGATTTGTGTTACCGACGGAAGTATATACCGGGAGAAGAATCAGCAT
GA
back to top

protein sequence of NO09G01460.1

>NO09G01460.1-protein ID=NO09G01460.1-protein|Name=NO09G01460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=334bp
MREPPSPQEDSAALMCTSSNQEQGDDWKATTIAMMEGLDLEEEDVNPRRS
PAERKRLRNLQKRPGWYRRVSRWVGKGTKKRIRELWPRYGIEPPGWQVKM
DIPALFAPDREVRTVVVDVGFGDGATLVTKALELQELAPEVGFMGCEWHS
ASVGGALTRMNETAVENVRMLRGDFLHHLRAGWFAPGALDEVCIFFPDPW
PRPEDHERRVINAVSVGHLAGCVKPGGFLHVATDVRDYAAWVGKVMEGDG
GNWEACAVPKESVLYRSPSQDGVEDGPHYHHGLEEVEAIYGLLEARPRWR
PLTRYESRGIHELEHKIYDLCYRRKYIPGEESA*
back to top
Synonyms
Publications