NO09G01220, NO09G01220 (gene) Nannochloropsis oceanica

Overview
NameNO09G01220
Unique NameNO09G01220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1844
Alignment locationchr9:399147..400990 +

Link to JBrowse

Properties
Property NameValue
DescriptionMethylmalonate-semialdehyde dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:399147..400990 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004491methylmalonate-semialdehyde dehydrogenase (acylating) activity
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR016161Ald_DH/histidinol_DH
IPR010061MeMal-semiAld_DH
IPR015590Aldehyde_DH_dom
Homology
BLAST of NO09G01220 vs. NCBI_GenBank
Match: EWM27665.1 (methylmalonate-semialdehyde dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 793.9 bits (2049), Expect = 3.200e-226
Identity = 388/484 (80.17%), Postives = 433/484 (89.46%), Query Frame = 0
Query:   18 LITCDNFIQGKYQPSSSSNDYLPVVSPVDNTQVGRVCISNAADVDMAVACAQGAFPGWSGLTMKARASIMFRFQHLMEIHAEELAQLVVRENGKNIAEARASVAKGNETVEWACGLPQMVQGKILQVSRGVTCSDLREPIGVVASVSPLNFPIMCPMWTIPIALTAGNCVILKPSEKVPLTMHRVAALLHEAGVPPGVFQIVNGTAEAVNALIDHPGVAGVTFVGSSRVAELVANRATKLNKRVLAMGGAKNHLVALPDCEVESAASDIVASFAGCAGQRCMAATVLILVGKQPALLDAIVSKAKGLAPGVTPGQVGAIIDAASQQRILGYISVAEKEGVKLLVDGRGWATSQKAGTWVGPTVLLHSNKEDKALKDEIFGPVLSVIEMQTWDEAIAFENANPHGNAACIYTTVGAHAAYFETRFRAGMIGVNVGVPVPREPFSFGGLFGTQSKYGCMVDITGEGCLEFVTNKRKITTKWAFPYG 502
            +I C+NF+ G+YQ  +S  DYLPV SP D  Q+G+V +S+A+DV  AVACAQ AFP WSG+TMKARASIMFRFQHLME HAEELA LVVRENGKN+AEARASVAKGNETVEWACGLPQM QGK+LQVSRGVTC D+RE IGVV SV PLNFPIMCPMWTIPIALTAGNC+ILKPSEKVPLTMHRVAALLHEAGVPPGVFQ VNG  EAVNALIDHP V GVTFVGSSRVAE+VA RA++LNKRVLAMGGAKNHLVALPDC VESA+SDIVASFAGCAGQRCMAATVLIL+G+Q +LL+A++ KA  L PGV PGQVGAIIDA SQ+RIL YI  AEK+GV LL+DGRGWA + KAGTWVGPT+LLH+  +D+A+++EIFGPVLSVI + TW+EA+A E +NPHGNAAC+YTTVGAHA +FETRFRAGMIGVNVGVPVPREPFSFGGLFGT+SKYG MVDITGEGCLEF+TNKRKIT+KWAFP G
Sbjct:   17 MIVCENFVDGQYQ--TSKGDYLPVKSPTDGVQIGKVYLSDASDVSTAVACAQRAFPAWSGMTMKARASIMFRFQHLMEQHAEELALLVVRENGKNLAEARASVAKGNETVEWACGLPQMAQGKLLQVSRGVTCCDMREAIGVVVSVCPLNFPIMCPMWTIPIALTAGNCLILKPSEKVPLTMHRVAALLHEAGVPPGVFQTVNGQVEAVNALIDHPLVRGVTFVGSSRVAEVVAERASRLNKRVLAMGGAKNHLVALPDCHVESASSDIVASFAGCAGQRCMAATVLILIGEQASLLEAVIRKAGALTPGVEPGQVGAIIDAISQERILRYIDEAEKQGVTLLLDGRGWAQAAKAGTWVGPTILLHTRADDEAMREEIFGPVLSVIRVATWEEALAIEASNPHGNAACVYTTVGAHAQFFETRFRAGMIGVNVGVPVPREPFSFGGLFGTRSKYGSMVDITGEGCLEFMTNKRKITSKWAFPEG 498          
BLAST of NO09G01220 vs. NCBI_GenBank
Match: XP_008613102.1 (methylmalonate-semialdehyde dehydrogenase (acylating) [Saprolegnia diclina VS20] >EQC33462.1 methylmalonate-semialdehyde dehydrogenase (acylating) [Saprolegnia diclina VS20])

HSP 1 Score: 626.3 bits (1614), Expect = 8.700e-176
Identity = 315/489 (64.42%), Postives = 386/489 (78.94%), Query Frame = 0
Query:   10 APSSSTQALITCDNFIQGKYQPSSSSNDYLPVVSPVDNTQVGRVCISNAADVDMAVACAQGAFPGWSGLTMKARASIMFRFQHLMEIHAEELAQLVVRENGKNIAEARASVAKGNETVEWACGLPQMVQGKILQVSRGVTCSDLREPIGVVASVSPLNFPIMCPMWTIPIALTAGNCVILKPSEKVPLTMHRVAALLHEAGVPPGVFQIVNGTAEAVNALIDHPGVAGVTFVGSSRVAELVANRATKLNKRVLAMGGAKNHLVALPDCEVESAASDIVASFAGCAGQRCMAATVLILVGKQPALLDAIVSKAKGLAPGVTPGQVGAIIDAASQQRILGYISVAEKEGVKLLVDGRGWATSQKA-GTWVGPTVLLHSNKEDKALKDEIFGPVLSVIEMQTWDEAIAFENANPHGNAACIYTTVGAHAAYFETRFRAGMIGVNVGVPVPREPFSFGGLFGTQSKYGCMVDITGEGCLEFVTNKRKITTKWA 498
            +PS   +   TCDN++ G++  + +S  YL + SPV    +G+V +S AADV +AV  A+ A PGWSGLT+KARA+IM +F  LM  HA+ELA LVV ENGKN +EA ASV KGNETVE+AC LPQ++QGK L+VSRG+TC + R P+GV+AS+ P NFPIM PMWT+PIALT GNCVILKPSEKVP+TM RVA+ L EAGVPPGVFQIV+G AEAV +L DHP VA VTFVGSS VA+ +A R   L+KRVLA+GGAKNHLVALPD +++ A+ DIVASFAGCAGQRCMAA+VL+LVG    LL+++V +A+ L  G   GQVGAIIDA SQ+RIL YI+ AE  G  +LVDGR WAT     G WVGPTVLLH+N  D A+ DEIFGPVLSV ++ + DEA+A ENA+P GNAACIYT+ G HA +F +RF+A MIGVN+GVPVPREPFSFGGL+GT+SKYG M DITG+GC+EF T++RKIT+KW+
Sbjct:    4 SPSKKLKTSYTCDNYVHGRF-AAPTSGAYLDIESPVTGAIIGKVAVSTAADVAVAVEHAKKALPGWSGLTVKARAAIMLKFHELMRKHADELADLVVLENGKNKSEALASVIKGNETVEYACSLPQLLQGKTLEVSRGITCQETRAPLGVIASIVPFNFPIMVPMWTVPIALTTGNCVILKPSEKVPITMTRVASFLSEAGVPPGVFQIVHGQAEAVTSLCDHPDVAAVTFVGSSPVAQKIARRCRALDKRVLALGGAKNHLVALPDADLDLASKDIVASFAGCAGQRCMAASVLLLVGNCHELLESVVQRARNLMRGTGAGQVGAIIDAVSQKRILKYINDAEASGATVLVDGRAWATETAGHGYWVGPTVLLHTNPADAAMHDEIFGPVLSVYKVHSADEALAIENASPFGNAACIYTSHGGHAEHFASRFQAAMIGVNIGVPVPREPFSFGGLYGTKSKYGDM-DITGDGCVEFCTHRRKITSKWS 490          
BLAST of NO09G01220 vs. NCBI_GenBank
Match: OQR96427.1 (methylmalonate semialdehyde dehydrogenase, acylating [Thraustotheca clavata])

HSP 1 Score: 625.2 bits (1611), Expect = 1.900e-175
Identity = 314/494 (63.56%), Postives = 386/494 (78.14%), Query Frame = 0
Query:   10 APSSSTQAL-ITCDNFIQGKYQPSSSSNDYLPVVSPVDNTQVGRVCISNAADVDMAVACAQGAFPGWSGLTMKARASIMFRFQHLMEIHAEELAQLVVRENGKNIAEARASVAKGNETVEWACGLPQMVQGKILQVSRGVTCSDLREPIGVVASVSPLNFPIMCPMWTIPIALTAGNCVILKPSEKVPLTMHRVAALLHEAGVPPGVFQIVNGTAEAVNALIDHPGVAGVTFVGSSRVAELVANRATKLNKRVLAMGGAKNHLVALPDCEVESAASDIVASFAGCAGQRCMAATVLILVGKQPALLDAIVSKAKGLAPGVTPGQVGAIIDAASQQRILGYISVAEKEGVKLLVDGRGWATSQKA-GTWVGPTVLLHSNKEDKALKDEIFGPVLSVIEMQTWDEAIAFENANPHGNAACIYTTVGAHAAYFETRFRAGMIGVNVGVPVPREPFSFGGLFGTQSKYGCMVDITGEGCLEFVTNKRKITTKWAFPYG 502
            +PS   +++  TCDN+I G + P      YLP+ SPV  T +G V +S AADVD+AV  A+ AFP WS LT+KARA+IM RF  LM +HA+ELA LVV ENGKN +EA ASV KGNETVE+AC LPQ++QGK+L+VSRG+TC + R+P+GV+ S+ P NFPIM PMWTIPIALT GNCVILKPSEKVP+TM +VA  L EAGVPPGVFQIV+G   A  +L DHP VA VTFVGSS VA+ +A R   ++KRVLA+GGAKNHL+ALPD ++E A+ DIVASFAGCAGQRCMAA+VL+LVG    LLD++V +A  LA G   GQVGAIIDA SQ+RIL YI  AE  G  +LVDGR WAT  K  G WVGPTV+LH+N +D A++DEIFGPVLSV ++ + +EA+A EN +P GNAAC+YT+ G HA YF +RF+A MIGVN+GVPVPREPFSFGGL+GT+SK+G M DITG+GC+EF T++RKIT+KW+   G
Sbjct:    4 SPSKKPKSINFTCDNYIYGAFTP-PKEGAYLPIESPVTGTIIGNVALSTAADVDVAVQNAKKAFPAWSSLTVKARAAIMLRFHDLMRVHADELADLVVLENGKNKSEALASVLKGNETVEYACSLPQLIQGKVLEVSRGITCQEKRDPLGVIVSIVPFNFPIMVPMWTIPIALTTGNCVILKPSEKVPITMTKVANYLAEAGVPPGVFQIVHGQVPAATSLCDHPDVAAVTFVGSSPVAQKIAQRCHAMSKRVLALGGAKNHLIALPDADLELASRDIVASFAGCAGQRCMAASVLLLVGNGTELLDSVVVRALNLARGTGAGQVGAIIDAISQKRILKYIDEAEANGATILVDGRHWATETKGHGYWVGPTVILHTNPKDAAMQDEIFGPVLSVYKVHSAEEALAIENNSPFGNAACVYTSNGGHAEYFTSRFKAAMIGVNIGVPVPREPFSFGGLYGTRSKFGDM-DITGDGCVEFCTHRRKITSKWSLNEG 495          
BLAST of NO09G01220 vs. NCBI_GenBank
Match: XP_009842745.1 (methylmalonate-semialdehyde dehydrogenase (acylating) [Aphanomyces astaci] >ETV67752.1 methylmalonate-semialdehyde dehydrogenase (acylating) [Aphanomyces astaci])

HSP 1 Score: 624.4 bits (1609), Expect = 3.300e-175
Identity = 311/486 (63.99%), Postives = 386/486 (79.42%), Query Frame = 0
Query:   12 SSSTQALITCDNFIQGKYQPSSSSNDYLPVVSPVDNTQVGRVCISNAADVDMAVACAQGAFPGWSGLTMKARASIMFRFQHLMEIHAEELAQLVVRENGKNIAEARASVAKGNETVEWACGLPQMVQGKILQVSRGVTCSDLREPIGVVASVSPLNFPIMCPMWTIPIALTAGNCVILKPSEKVPLTMHRVAALLHEAGVPPGVFQIVNGTAEAVNALIDHPGVAGVTFVGSSRVAELVANRATKLNKRVLAMGGAKNHLVALPDCEVESAASDIVASFAGCAGQRCMAATVLILVGKQPALLDAIVSKAKGLAPGVTPGQVGAIIDAASQQRILGYISVAEKEGVKLLVDGRGWATSQKAGTWVGPTVLLHSNKEDKALKDEIFGPVLSVIEMQTWDEAIAFENANPHGNAACIYTTVGAHAAYFETRFRAGMIGVNVGVPVPREPFSFGGLFGTQSKYGCMVDITGEGCLEFVTNKRKITTKWA 498
            +S+T+AL+ CDNFI G + P +   +YL V SP     +G+V +S  ADVD AVA A+ AF  WS LT+KARA+IM +F  L+  H +ELA LVV ENGKN +EA ASV KGNETVE+AC LPQ++QG++L+VSRG+TC + R+P+G++ S+ P NFP+M P+WT+PIALT GNCVILKPSEKVP TM R+A LL +AGVPPGVFQIV+G A +V AL+DHP V  VTFVGSS VA+L++ R   ++KRVLA+GGAKNHLVALPD  VE+ A D+VASFAGC+GQRCMAA+VL+LVG   AL+DA+V+KA  L  G  PGQVGAIID AS++RIL YI  AE  G  +LVDGRGWA   K G WVGPTVL+H+N  D AL  EIFGPVLS+ ++ ++DEA+A ENA+P GNAACIYT+ G +A YF++RFRAGMIGVNVGVPVPREPFSFGG++GTQSKYG M DITG+GC+EF T++RKIT KW+
Sbjct:   14 NSATEALV-CDNFIHGVFTP-AKGGEYLDVESPTTGDVIGKVALSAKADVDAAVAYAKAAFGPWSSLTVKARAAIMLKFHELIRHHVDELADLVVLENGKNKSEAVASVLKGNETVEYACSLPQLLQGRVLEVSRGITCHETRDPLGIIVSIVPFNFPVMVPLWTVPIALTTGNCVILKPSEKVPATMTRIAQLLAQAGVPPGVFQIVHGQAPSVTALVDHPDVHAVTFVGSSPVAQLISRRCRAIDKRVLALGGAKNHLVALPDASVEATARDVVASFAGCSGQRCMAASVLLLVGNCSALVDAVVAKATALTRGTGPGQVGAIIDGASKRRILKYIDEAEAGGATVLVDGRGWAHESK-GYWVGPTVLVHTNPSDAALHHEIFGPVLSIYQVHSFDEALAIENASPFGNAACIYTSHGGNAEYFQSRFRAGMIGVNVGVPVPREPFSFGGMYGTQSKYGDM-DITGDGCVEFCTHRRKITAKWS 495          
BLAST of NO09G01220 vs. NCBI_GenBank
Match: XP_012205335.1 (methylmalonate-semialdehyde dehydrogenase [Saprolegnia parasitica CBS 223.65] >KDO24016.1 methylmalonate-semialdehyde dehydrogenase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 622.5 bits (1604), Expect = 1.300e-174
Identity = 313/489 (64.01%), Postives = 383/489 (78.32%), Query Frame = 0
Query:   10 APSSSTQALITCDNFIQGKYQPSSSSNDYLPVVSPVDNTQVGRVCISNAADVDMAVACAQGAFPGWSGLTMKARASIMFRFQHLMEIHAEELAQLVVRENGKNIAEARASVAKGNETVEWACGLPQMVQGKILQVSRGVTCSDLREPIGVVASVSPLNFPIMCPMWTIPIALTAGNCVILKPSEKVPLTMHRVAALLHEAGVPPGVFQIVNGTAEAVNALIDHPGVAGVTFVGSSRVAELVANRATKLNKRVLAMGGAKNHLVALPDCEVESAASDIVASFAGCAGQRCMAATVLILVGKQPALLDAIVSKAKGLAPGVTPGQVGAIIDAASQQRILGYISVAEKEGVKLLVDGRGWATSQKA-GTWVGPTVLLHSNKEDKALKDEIFGPVLSVIEMQTWDEAIAFENANPHGNAACIYTTVGAHAAYFETRFRAGMIGVNVGVPVPREPFSFGGLFGTQSKYGCMVDITGEGCLEFVTNKRKITTKWA 498
            +PS   +   TCDN++ G++  + +S  YL + SPV    +G+V +S AADV +AV  A+ A PGWSGLT+KARA+IM +F  LM  HA+ELA LVV ENGKN +EA ASV KGNETVE+AC LPQ++QGK L+VSRG+TC + R P+GV+AS+ P NFPIM PMWT+PIALT GNCVILKPSEKVP+TM RVA+ L EAGVPPGVFQIV+G  EAV +L DHP VA VTFVGSS VA+ +A R   L+KRVLA+GGAKNHLVALPD +++ A+ DIVASFAGCAGQRCMAA+VL+LVG    LLD++V +A+ L  G   GQVGAIIDA +Q+RIL YI  AE  G  +LVDGR WAT     G WVGPTVLLH+N  D A+ DEIFGPVLSV ++ + DEA+  ENA+P GNAACIYT+ G HA +F +RF+A MIGVN+GVPVPREPFSFGGL+GT+SKYG M DITG+GC+EF T++RKIT+KW+
Sbjct:    4 SPSKKLKTSYTCDNYVHGRF-AAPTSGAYLDIESPVTGAIIGKVAVSTAADVAVAVDHAKKALPGWSGLTVKARAAIMLKFHELMRKHADELADLVVLENGKNKSEALASVIKGNETVEYACSLPQLLQGKTLEVSRGITCQETRAPLGVIASIVPFNFPIMVPMWTVPIALTTGNCVILKPSEKVPITMTRVASFLAEAGVPPGVFQIVHGQVEAVTSLCDHPDVAAVTFVGSSPVAQKIARRCRALDKRVLALGGAKNHLVALPDADLDLASKDIVASFAGCAGQRCMAASVLLLVGNCHELLDSVVHRARNLTRGTGAGQVGAIIDAVAQKRILKYIDDAEASGATILVDGRAWATETVGHGYWVGPTVLLHTNPADAAMHDEIFGPVLSVYKVHSADEALKIENASPFGNAACIYTSHGGHAEHFASRFKAAMIGVNIGVPVPREPFSFGGLYGTKSKYGDM-DITGDGCVEFCTHRRKITSKWS 490          
BLAST of NO09G01220 vs. NCBI_GenBank
Match: XP_005853769.1 (methylmalonate-semialdehyde dehydrogenase, partial [Nannochloropsis gaditana CCMP526] >EKU22590.1 methylmalonate-semialdehyde dehydrogenase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 621.7 bits (1602), Expect = 2.200e-174
Identity = 301/368 (81.79%), Postives = 334/368 (90.76%), Query Frame = 0
Query:  134 PQMVQGKILQVSRGVTCSDLREPIGVVASVSPLNFPIMCPMWTIPIALTAGNCVILKPSEKVPLTMHRVAALLHEAGVPPGVFQIVNGTAEAVNALIDHPGVAGVTFVGSSRVAELVANRATKLNKRVLAMGGAKNHLVALPDCEVESAASDIVASFAGCAGQRCMAATVLILVGKQPALLDAIVSKAKGLAPGVTPGQVGAIIDAASQQRILGYISVAEKEGVKLLVDGRGWATSQKAGTWVGPTVLLHSNKEDKALKDEIFGPVLSVIEMQTWDEAIAFENANPHGNAACIYTTVGAHAAYFETRFRAGMIGVNVGVPVPREPFSFGGLFGTQSKYGCMVDITGEGCLEFVTNKRKITTKWAFPYG 502
            PQM QGK+LQVSRGVTC D+RE IGVV SV PLNFPIMCPMWTIPIALTAGNC+ILKPSEKVPLTMHRVAALLHEAGVPPGVFQ VNG  EAVNALIDHP V GVTFVGSSRVAE+VA RA++LNKRVLAMGGAKNHLVALPDC VESA+SDIVASFAGCAGQRCMAATVLIL+G+Q +LL+A++ KA  L PGV PGQVGAIIDA SQ+RIL YI  AEK+GV LL+DGRGWA + KAGTWVGPT+LLH+  +D+A+++EIFGPVLSVI + TW+EA+A E +NPHGNAAC+YTTVGAHA +FETRFRAGMIGVNVGVPVPREPFSFGGLFGT+SKYG MVDITGEGCLEF+TNKRKIT+KWAFP G
Sbjct:   37 PQMAQGKLLQVSRGVTCCDMREAIGVVVSVCPLNFPIMCPMWTIPIALTAGNCLILKPSEKVPLTMHRVAALLHEAGVPPGVFQTVNGQVEAVNALIDHPLVRGVTFVGSSRVAEVVAERASRLNKRVLAMGGAKNHLVALPDCHVESASSDIVASFAGCAGQRCMAATVLILIGEQASLLEAVIRKAGALTPGVEPGQVGAIIDAISQERILRYIDEAEKQGVTLLLDGRGWAQAAKAGTWVGPTILLHTRADDEAMREEIFGPVLSVIRVATWEEALAIEASNPHGNAACVYTTVGAHAQFFETRFRAGMIGVNVGVPVPREPFSFGGLFGTRSKYGSMVDITGEGCLEFMTNKRKITSKWAFPEG 404          
BLAST of NO09G01220 vs. NCBI_GenBank
Match: XP_008879323.1 (methylmalonate-semialdehyde dehydrogenase (acylating) [Aphanomyces invadans] >ETV92026.1 methylmalonate-semialdehyde dehydrogenase (acylating) [Aphanomyces invadans])

HSP 1 Score: 620.5 bits (1599), Expect = 4.800e-174
Identity = 307/486 (63.17%), Postives = 384/486 (79.01%), Query Frame = 0
Query:   12 SSSTQALITCDNFIQGKYQPSSSSNDYLPVVSPVDNTQVGRVCISNAADVDMAVACAQGAFPGWSGLTMKARASIMFRFQHLMEIHAEELAQLVVRENGKNIAEARASVAKGNETVEWACGLPQMVQGKILQVSRGVTCSDLREPIGVVASVSPLNFPIMCPMWTIPIALTAGNCVILKPSEKVPLTMHRVAALLHEAGVPPGVFQIVNGTAEAVNALIDHPGVAGVTFVGSSRVAELVANRATKLNKRVLAMGGAKNHLVALPDCEVESAASDIVASFAGCAGQRCMAATVLILVGKQPALLDAIVSKAKGLAPGVTPGQVGAIIDAASQQRILGYISVAEKEGVKLLVDGRGWATSQKAGTWVGPTVLLHSNKEDKALKDEIFGPVLSVIEMQTWDEAIAFENANPHGNAACIYTTVGAHAAYFETRFRAGMIGVNVGVPVPREPFSFGGLFGTQSKYGCMVDITGEGCLEFVTNKRKITTKWA 498
            + +  A + CDNFI G + P+ +   YL + SP     +G+V +S+  DVD+AVA A+ AF  WS +T+KARA+IM +F  L+  H +ELA LVV ENGKN +EA ASV KGNETVE+AC LPQ++QG++L+VSRG+TC + R+P+G++ S+ P NFP+M P+WT+PIALT GNCVILKPSEKVP TM RVA LL +AGVPPGVFQIV+G A  V AL+DHP V  VTFVGSS +A+L++ R   ++KRVLA+GGAKNHLVALPD  V++ A D+VASFAGCAGQRCMAA+VL+LVG   AL+DA+V+KAK L  G   GQVGAIIDAASQ+RIL YI  AE  G  +LVDGR WA   K G WVGPTVLLH+N  D AL DEIFGPV+SV ++ +++EA+A ENA+P GNAACIYT+ G +A YF++RFRAGMIGVNVGVPVPREPFSFGG++GTQSKYG M DITG+GC+EF T++RKIT+KW+
Sbjct:   11 ADAAPAALVCDNFINGVFTPAKAGG-YLNIESPSTGNVIGKVTLSDKTDVDVAVAFAKQAFGTWSAMTVKARAAIMLKFHELIRHHVDELADLVVLENGKNKSEAIASVLKGNETVEYACSLPQLLQGRVLEVSRGITCHETRDPLGIIVSIVPFNFPVMVPLWTVPIALTTGNCVILKPSEKVPATMTRVAQLLAQAGVPPGVFQIVHGQAPPVTALVDHPDVKAVTFVGSSPIAQLISRRCRAIDKRVLALGGAKNHLVALPDAPVDATARDVVASFAGCAGQRCMAASVLLLVGDCSALVDAVVTKAKALTRGTAAGQVGAIIDAASQRRILKYIDEAEAGGASVLVDGRPWAKESK-GYWVGPTVLLHTNPSDAALHDEIFGPVISVYQVDSFEEALAIENASPFGNAACIYTSHGGNAEYFQSRFRAGMIGVNVGVPVPREPFSFGGMYGTQSKYGDM-DITGDGCVEFCTHRRKITSKWS 493          
BLAST of NO09G01220 vs. NCBI_GenBank
Match: OQS01257.1 (methylmalonate semialdehyde dehydrogenase acylating [Achlya hypogyna])

HSP 1 Score: 615.1 bits (1585), Expect = 2.000e-172
Identity = 312/510 (61.18%), Postives = 389/510 (76.27%), Query Frame = 0
Query:   10 APSSSTQAL--ITCDNFIQGKYQPSSSSNDYLPVVSPVDNTQVGRVCISNAADVDMAVACAQGAFPGWSGLTMKARASIMFRFQHLMEIHAEELAQLVVRENGKNIAEARASVAKGNETVEWACGLPQMVQGKILQVSRGVTCSDLREPIGVVASVSPLNFPIMCPMWTIPIALTAGNCVILKPSEKVPLTMHRVAALLHEAGVPPGVFQ---------------IVNGTAEAVNALIDHPGVAGVTFVGSSRVAELVANRATKLNKRVLAMGGAKNHLVALPDCEVESAASDIVASFAGCAGQRCMAATVLILVGKQPALLDAIVSKAKGLAPGVTPGQVGAIIDAASQQRILGYISVAEKEGVKLLVDGRGWATSQKA-GTWVGPTVLLHSNKEDKALKDEIFGPVLSVIEMQTWDEAIAFENANPHGNAACIYTTVGAHAAYFETRFRAGMIGVNVGVPVPREPFSFGGLFGTQSKYGCMVDITGEGCLEFVTNKRKITTKWAFPYG 502
            +PS   +A    TCDN++ G++  + +S  YLP+ SPV    +G+V +S AAD++ AVA A+ AFP WSGLT+KARA+IM +F  LM  HA+ELA LVV ENGKN +EA ASV KGNETVE+AC LPQ+VQGK L+VSRG+TC++ R+P+GV+ SV P NFP+M PMWT+PIALT GNCVILKPSEKVP+TM +VA+ L EAGVP GVFQ               I++G  EAV +L+DHP V+ VTFVGSS VA+L+A R    +KRVLA+GGAKNHLVALPD ++E A+ DIVASFAGCAGQRCMAA+VL+LVG    LLD +V +A+ L  G   GQVGA+IDAASQ+RI+ YI  AE  G  +LVDGR WAT+ K  G WVGPTVLLH+N  D A+ +EIFGPVLSV ++Q+ +EA+A ENA+P GNAAC+YT+ G HA YF  RF A MIGVN+GVPVPREPFSFGGL+G++SKYG M DITG+GC+EF T++RK+T KW+   G
Sbjct:    4 SPSKKAKAASDFTCDNYVHGRF-VAPASGAYLPIESPVTGATIGKVALSTAADIEDAVAHAKKAFPAWSGLTVKARAAIMLKFHELMRKHADELADLVVLENGKNKSEALASVLKGNETVEYACSLPQLVQGKTLEVSRGITCTETRDPLGVIVSVVPFNFPVMVPMWTVPIALTTGNCVILKPSEKVPITMTKVASFLAEAGVPAGVFQVHTAPFLWVAAYRTKIIHGQVEAVTSLVDHPDVSAVTFVGSSPVAQLIARRCRAQDKRVLALGGAKNHLVALPDADLELASKDIVASFAGCAGQRCMAASVLLLVGSGTELLDMVVHRAQNLTRGTGAGQVGAVIDAASQKRIIKYIDDAEAGGATVLVDGRPWATATKGQGYWVGPTVLLHTNPADAAMHEEIFGPVLSVYKVQSGEEALAIENASPFGNAACVYTSHGGHAEYFTRRFHAAMIGVNIGVPVPREPFSFGGLYGSRSKYGDM-DITGDGCVEFCTHRRKVTAKWSIHEG 511          
BLAST of NO09G01220 vs. NCBI_GenBank
Match: GAX93307.1 (Hypothetical protein PINS_001195 [Pythium insidiosum])

HSP 1 Score: 614.4 bits (1583), Expect = 3.400e-172
Identity = 315/493 (63.89%), Postives = 384/493 (77.89%), Query Frame = 0
Query:    6 TNSSAPSSSTQALITCDNFIQGKYQPSSSSNDYLPVVSPVDNTQVGRVCISNAADVDMAVACAQGAFPGWSGLTMKARASIMFRFQHLMEIHAEELAQLVVRENGKNIAEARASVAKGNETVEWACGLPQMVQGKILQVSRGVTCSDLREPIGVVASVSPLNFPIMCPMWTIPIALTAGNCVILKPSEKVPLTMHRVAALLHEAGVPPGVFQIVNGTAEAVNALIDHPGVAGVTFVGSSRVAELVANRATKLNKRVLAMGGAKNHLVALPDCEVESAASDIVASFAGCAGQRCMAATVLILVGKQPALLDAIVSKAKGLAPGVTPGQVGAIIDAASQQRILGYISVAEKE-GVKLLVDGRGWATSQKAGTWVGPTVLLHSNKEDKALKDEIFGPVLSVIEMQTWDEAIAFENANPHGNAACIYTTVGAHAAYFETRFRAGMIGVNVGVPVPREPFSFGGLFGTQSKYGCMVDITGEGCLEFVTNKRKITTKWA 498
            T+ S    +  A++  DN+I G++ P SS   Y+ V SP     +GR  +SNAADV  AVA A+ A P WS LT+KARA++M RF  L+  HA+ELA +VVRENGKN  EA ASVAKGNETVE+AC LPQ+VQG+ L VSRG+TC +LREP+GVVA V P NFPIM PMWT+PIALT GNCV+LKPSEKVPLTM RVA LL  AGVPPGVFQ+VNG AEAV  L DHP V  +TFVGSSRVA+LVA R   ++KRVLA+GGAKNHLVALPD +++ AA DIVASFAGCAGQRCMAA+VL+LVG   ALL  IV+  + L  G   GQVGA+IDAAS+QR+L YI  AE++ G ++LVDGR WA ++  G WVGPT+LLH+   D A++DEIFGPVLSV ++ T++EA+A ENAN  GNAA +YT+ GA A +F+TRFRA MIGVN+G+PVPREPFSFGGL+GT+SKYG M DITG+G +EF + +RKITTKW+
Sbjct:    3 TSPSKRQRTDHAVVVADNYINGQFVPPSSGL-YMDVHSPSTGDVIGRCALSNAADVAQAVARARAALPAWSALTVKARAAVMLRFHALLTEHADELADIVVRENGKNKVEALASVAKGNETVEYACSLPQLVQGRTLAVSRGITCHELREPLGVVACVVPFNFPIMVPMWTVPIALTLGNCVVLKPSEKVPLTMRRVAELLTLAGVPPGVFQLVNGAAEAVTTLCDHPDVRALTFVGSSRVAQLVARRCRAIDKRVLALGGAKNHLVALPDADIDMAAKDIVASFAGCAGQRCMAASVLLLVGDCDALLAKIVAATQQLTRGTGAGQVGALIDAASKQRVLKYIDEAEQQYGARVLVDGRAWA-AEPRGNWVGPTILLHAQASDPAMQDEIFGPVLSVFKVATFEEALAIENANDFGNAASVYTSNGASAEWFQTRFRAAMIGVNIGIPVPREPFSFGGLYGTKSKYGDM-DITGDGAVEFFSQRRKITTKWS 492          
BLAST of NO09G01220 vs. NCBI_GenBank
Match: CBJ26338.1 (Methylmalonate Semialdehyde Dehydrogenase [Ectocarpus siliculosus])

HSP 1 Score: 612.5 bits (1578), Expect = 1.300e-171
Identity = 311/484 (64.26%), Postives = 374/484 (77.27%), Query Frame = 0
Query:   18 LITCDNFIQGKYQPSSSSNDYLPVVSPVDNTQVGRVCISNAADVDMAVACAQGAFPGWSGLTMKARASIMFRFQHLMEIHAEELAQLVVRENGKNIAEARASVAKGNETVEWACGLPQMVQGKILQVSRGVTCSDLREPIGVVASVSPLNFPIMCPMWTIPIALTAGNCVILKPSEKVPLTMHRVAALLHEAGVPPGVFQIVNGTAEAVNALIDHPGVAGVTFVGSSRVAELVANRATKLNKRVLAMGGAKNHLVALPDCEVESAASDIVASFAGCAGQRCMAATVLILVGKQPALLDAIVSKAKGLAPGVTPGQVGAIIDAASQQRILGYISVAEKEGVKLLVDGRGWATSQKAGTWVGPTVLLHSNKEDK--ALKDEIFGPVLSVIEMQTWDEAIAFENANPHGNAACIYTTVGAHAAYFETRFRAGMIGVNVGVPVPREPFSFGGLFGTQSKYGCMVDITGEGCLEFVTNKRKITTKWAFP 500
            ++ CDN I G+  P  S   YL VVSP D T +GRV +S   +V++A A A+ AF GWSG+T K+RA+IMFRF  L+E+HA+ELA LVV ENGKN AEA ASVAKGNETVEWAC +PQ++QGKILQVSRG+ C DLREP+GVVA + P NFPIM PMWT+PIALTAGNCVILKPSEKVPLTM +V  LL EAG+PPGVFQIVNG  EA  AL D   V  +TFVGSS VA+ VA R   +NKRVLA+GGA+NHL+ALPDC+ E+AA DIVASFAGCAGQRCMAA+VL+LVG    LLD ++ K+K L PG   G+VG +I  AS+  I+G I  AE EG +++VDGRGWA  ++ GTWVGPTV++ S   +K     +EIFGPVL V+++ TW EA+A ENA+P GNAA +YT+ G  A YF+TRFRAGMIGVNVG+PVPREPF+FGGL GT SKYG   D+T EG +EF TN+RKITTKWA P
Sbjct:   18 VVVCDNLIGGESTPPLSGT-YLDVVSPSDGTVLGRVAMSGQKEVEVAAARAEEAFVGWSGMTAKSRAAIMFRFHSLLEMHADELADLVVAENGKNKAEALASVAKGNETVEWACSMPQLMQGKILQVSRGIECRDLREPLGVVACLVPFNFPIMVPMWTVPIALTAGNCVILKPSEKVPLTMRKVGQLLGEAGLPPGVFQIVNGGKEAAEALCDAEAVKALTFVGSSGVAKSVAARCHAVNKRVLALGGAENHLIALPDCDHEAAAHDIVASFAGCAGQRCMAASVLVLVGDTGDLLDRVIQKSKALEPGTEAGKVGPVISTASRDHIVGRIGAAEAEGGEVVVDGRGWA-ERRPGTWVGPTVIVKSRNGNKGDGKSEEIFGPVLMVVKVDTWQEALAVENASPFGNAASVYTSSGPAADYFQTRFRAGMIGVNVGIPVPREPFAFGGLSGTLSKYGDF-DVTAEGAMEFFTNRRKITTKWALP 498          
The following BLAST results are available for this feature:
BLAST of NO09G01220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27665.13.200e-22680.17methylmalonate-semialdehyde dehydrogenase [Nannoch... [more]
XP_008613102.18.700e-17664.42methylmalonate-semialdehyde dehydrogenase (acylati... [more]
OQR96427.11.900e-17563.56methylmalonate semialdehyde dehydrogenase, acylati... [more]
XP_009842745.13.300e-17563.99methylmalonate-semialdehyde dehydrogenase (acylati... [more]
XP_012205335.11.300e-17464.01methylmalonate-semialdehyde dehydrogenase [Saprole... [more]
XP_005853769.12.200e-17481.79methylmalonate-semialdehyde dehydrogenase, partial... [more]
XP_008879323.14.800e-17463.17methylmalonate-semialdehyde dehydrogenase (acylati... [more]
OQS01257.12.000e-17261.18methylmalonate semialdehyde dehydrogenase acylatin... [more]
GAX93307.13.400e-17263.89Hypothetical protein PINS_001195 [Pythium insidios... [more]
CBJ26338.11.300e-17164.26Methylmalonate Semialdehyde Dehydrogenase [Ectocar... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010607NSK010607Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01220.1NO09G01220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|565852gene_4432Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100125g3gene2898Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01220.1NO09G01220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01220 ID=NO09G01220|Name=NO09G01220|organism=Nannochloropsis oceanica|type=gene|length=1844bp
ATGAGTCACCCCACCACCAATTCATCCGCTCCCTCCTCGAGCACGCAAGC
CCTGATCACCTGCGACAACTTCATCCAAGGGAAATACCAGCCCTCCTCGT
CCTCCAATGATTACCTCCCCGTTGTTTCGCCGGTCGACAATACGCAGGTC
GGGAGGGTCTGCATCTCGAATGCCGCCGATGTTGACATGGCAGTGGCCTG
TGCCCAAGGAGCCTTTCCTGGCTGGAGCGGATTGACCATGAAGGCAAGGG
CTAGCATCATGTTCCGCTTTCAGCATTTGATGGAAATTCACGCGGAAGAG
TTGGCCCAGCTGGTAGTGCGTGAGAACGGGAAGAACATCGCCGAGGCCCG
TGCTTCCGTCGCTAAAGGAAACGAGACAGTGGAATGGGCGTGTGGGCTGC
CCCAAATGGTGCAAGGGAAGATCTTGCAGGTCTCTCGTGGGGTCACATGC
TCGGATTTGCGCGAGCCTATAGGGGTGGTTGCTTCTGTGTCTCCTCTTAA
TTTTCCGATAATGTGTCCCATGTGGACGATTCCGATCGCGTTGACTGCAG
GGAACTGCGTGATTCTCAAGCCGTCGGAAAAGGTGCCTTTGACAATGCAC
CGTGTGGCGGCATTGTTACACGAAGCAGGTGTGCCTCCAGGGGTGTTTCA
GATCGTCAACGGTACAGCCGAGGCGGTGAATGCTCTAATCGACCATCCTG
GCGTTGCAGGAGTGACGTTCGTAGGATCCTCAAGGGTGGCGGAGTTGGTC
GCCAATCGGGCCACCAAATTAAATAAAAGGGTGCTGGCTATGGGAGGCGC
GAAGAACCATTTGGTGGCGCTACCGGATTGTGAGGTGGAGAGTGCGGCGA
GTGATATTGTGGCGAGCTTCGCGGGATGTGCCGGGCAACGGTGCATGgta
cgttgccgcgtgtaaatgttttgatgggtgacatttctatgtctctcctc
ctccggtcgtgcactctttgccatcaccattcggtgatggttctttcgtc
tactttcaatctttttcattcatttattcgtaattgtttgttaatttgtc
gtcttaaatcttctcatacacacgcaattttactccgctcctccccttcc
tctgcacagGCGGCCACCGTCCTCATCCTCGTCGGAAAGCAGCCTGCACT
ACTTGACGCCATAGTTAGCAAAGCCAAAGGCCTCGCTCCTGGAGTTACAC
CTGGACAGGTGGGTGCTATCATTGACGCCGCGTCGCAACAGCGAATTTTG
GGGTATATAAGCGTGGCGGAGAAGGAGGGTGTGAAGCTGTTGGTGGACGG
TCGAGGGTGGGCAACGAGCCAAAAAGCGGGTACTTGGGTAGGGCCGACGG
TGTTGCTGCATTCGAATAAGGAGGACAAGGCGCTGAAAGACGAAATATTC
GGGCCAGTCTTGTCGGTGATTGAAATGCAGACCTGGGATGAAGCGATTGC
CTTTGAAAATGCCAATCCGCATGGGAATGCTGCTTGTATTTATACCACGG
TTGGGGCTCACGCTGCGTATTTTGAGACAAGATTCCGCGCGGGCATGATA
GGGGTTAATGTGGGCGTGCCTGTCCCGAGGGAGCCGTTCTCGTTTGGAGG
GCTGTTTGGCACGCAAAGCAAATATGGGTGCATGGTAGATATTACGGGCG
AGGGTTGTTTGGAGTTCGTGACCAATAAAAGGAAAATAACAACCAAGTGG
GCGTTTCCCTATGGGGTGGGGGGGAGTGCTGCTGGTGGGGACGTGAATGG
GAATGGAGGGGGCGCATTTCAGGGACAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCATGCATCGGACCGGGCGAGTTTCATAGGGTCCATGTAG
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protein sequence of NO09G01220.1

>NO09G01220.1-protein ID=NO09G01220.1-protein|Name=NO09G01220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=544bp
MSHPTTNSSAPSSSTQALITCDNFIQGKYQPSSSSNDYLPVVSPVDNTQV
GRVCISNAADVDMAVACAQGAFPGWSGLTMKARASIMFRFQHLMEIHAEE
LAQLVVRENGKNIAEARASVAKGNETVEWACGLPQMVQGKILQVSRGVTC
SDLREPIGVVASVSPLNFPIMCPMWTIPIALTAGNCVILKPSEKVPLTMH
RVAALLHEAGVPPGVFQIVNGTAEAVNALIDHPGVAGVTFVGSSRVAELV
ANRATKLNKRVLAMGGAKNHLVALPDCEVESAASDIVASFAGCAGQRCMA
ATVLILVGKQPALLDAIVSKAKGLAPGVTPGQVGAIIDAASQQRILGYIS
VAEKEGVKLLVDGRGWATSQKAGTWVGPTVLLHSNKEDKALKDEIFGPVL
SVIEMQTWDEAIAFENANPHGNAACIYTTVGAHAAYFETRFRAGMIGVNV
GVPVPREPFSFGGLFGTQSKYGCMVDITGEGCLEFVTNKRKITTKWAFPY
GVGGSAAGGDVNGNGGGAFQGQQQQQQQQQQHASDRASFIGSM*
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Synonyms
Publications