NO09G01130, NO09G01130 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G01130 vs. NCBI_GenBank
Match: EWM27667.1 (Ribosomal protein L18e/L15P [Nannochloropsis gaditana]) HSP 1 Score: 214.2 bits (544), Expect = 2.800e-52 Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 0 Query: 1 MPSRLSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXKNRTYTKSVNVDKLWSLAGAEAFEAAK--NGDKAPVLDVTQMGFFKVLGKGKLPSVPLVVKAKYFSKDAEKKIKAAGGATLLTA 147 MPSRLSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXKNRTYTK+VNVDKLWSL GAEA+EAAK GDKAPVLDVTQMGFFKVLGKGKLPSVPLVVKAKYFSKDAEKKI+ AGGATLLTA Sbjct: 1 MPSRLSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXKNRTYTKAVNVDKLWSLLGAEAYEAAKAGGGDKAPVLDVTQMGFFKVLGKGKLPSVPLVVKAKYFSKDAEKKIREAGGATLLTA 148
BLAST of NO09G01130 vs. NCBI_GenBank
Match: XP_005853411.1 (large subunit ribosomal protein L27Ae, partial [Nannochloropsis gaditana CCMP526] >EKU22950.1 large subunit ribosomal protein L27Ae, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 211.8 bits (538), Expect = 1.400e-51 Identity = 139/147 (94.56%), Postives = 142/147 (96.60%), Query Frame = 0 Query: 2 PSRLSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXKNRTYTKSVNVDKLWSLAGAEAFEAAK--NGDKAPVLDVTQMGFFKVLGKGKLPSVPLVVKAKYFSKDAEKKIKAAGGATLLTA 147 PSRLSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXKNRTYTK+VNVDKLWSL GAEA+EAAK GDKAPVLDVTQMGFFKVLGKGKLPSVPLVVKAKYFSKDAEKKI+ AGGATLLTA Sbjct: 1 PSRLSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXKNRTYTKAVNVDKLWSLLGAEAYEAAKAGGGDKAPVLDVTQMGFFKVLGKGKLPSVPLVVKAKYFSKDAEKKIREAGGATLLTA 147
BLAST of NO09G01130 vs. NCBI_GenBank
Match: XP_002904786.1 (ribosomal protein L27 [Phytophthora infestans T30-4] >XP_009520762.1 hypothetical protein PHYSODRAFT_354074 [Phytophthora sojae] >AAY43423.1 ribosomal protein L27 [Phytophthora infestans] >EEY53168.1 ribosomal protein L27 [Phytophthora infestans T30-4] >EGZ25474.1 hypothetical protein PHYSODRAFT_354074 [Phytophthora sojae] >POM75390.1 Ribosomal protein L27 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 171.4 bits (433), Expect = 2.100e-39 Identity = 117/149 (78.52%), Postives = 131/149 (87.92%), Query Frame = 0 Query: 1 MPSRLSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXKNRTYTKSVNVDKLWSLAG---AEAFEAAKNGDKAPVLDVTQMGFFKVLGKGKLPSVPLVVKAKYFSKDAEKKIKAAGGATLLTA 147 MPSR SKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXX +NRT+ +VNV++LW+L E E AK+G KAPV+DVT+ G+FKVLGKG+LP VP++VKAKYFS +AEKKIKAAGGA LLTA Sbjct: 1 MPSRFSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXLRNRTHCPTVNVERLWTLVSEKTKEQAEKAKDG-KAPVIDVTKAGYFKVLGKGRLPEVPVIVKAKYFSAEAEKKIKAAGGACLLTA 148
BLAST of NO09G01130 vs. NCBI_GenBank
Match: XP_024573891.1 (60s ribosomal protein l27a [Plasmopara halstedii] >CEG37522.1 60s ribosomal protein l27a [Plasmopara halstedii]) HSP 1 Score: 170.6 bits (431), Expect = 3.500e-39 Identity = 118/149 (79.19%), Postives = 132/149 (88.59%), Query Frame = 0 Query: 1 MPSRLSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXKNRTYTKSVNVDKLWSLAG---AEAFEAAKNGDKAPVLDVTQMGFFKVLGKGKLPSVPLVVKAKYFSKDAEKKIKAAGGATLLTA 147 MPSR SKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXX+NR++ +VNV++LW+L E E AK+G KAPV+DVT+ GFFKVLGKG+LP VPL+VKAK+FS +AEKKIKAAGGA LLTA Sbjct: 1 MPSRFSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXRNRSHCPTVNVERLWTLVSEKTKEQAEKAKDG-KAPVIDVTKAGFFKVLGKGRLPEVPLIVKAKFFSAEAEKKIKAAGGACLLTA 148
BLAST of NO09G01130 vs. NCBI_GenBank
Match: GAX98544.1 (60S ribosomal protein L27a [Pythium insidiosum]) HSP 1 Score: 168.7 bits (426), Expect = 1.300e-38 Identity = 90/148 (60.81%), Postives = 107/148 (72.30%), Query Frame = 0 Query: 1 MPSRLSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXKNRTYTKSVNVDKLWSLAGAEAFE-AAKNGD-KAPVLDVTQMGFFKVLGKGKLPSVPLVVKAKYFSKDAEKKIKAAGGATLLTA 147 MPSR SKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQH +NR + +VNV++LWSL E A KN D KAP++DVT+ G+FKVLGKG+LP++P++VKAK+FS++AEKKIKAAGGA LLTA Sbjct: 1 MPSRFSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHHHRILMDKFHPGYFGKVGMRQFHLLRNRYHCPTVNVERLWSLVSESTKEQAEKNTDGKAPIIDVTKAGYFKVLGKGRLPNIPVIVKAKFFSEEAEKKIKAAGGACLLTA 148
BLAST of NO09G01130 vs. NCBI_GenBank
Match: XP_008914876.1 (60S ribosomal protein L27a [Phytophthora parasitica INRA-310] >ETI31892.1 60S ribosomal protein L27a [Phytophthora parasitica P1569] >ETK72252.1 60S ribosomal protein L27a [Phytophthora parasitica] >ETL25704.1 60S ribosomal protein L27a [Phytophthora parasitica] >ETL78913.1 60S ribosomal protein L27a [Phytophthora parasitica] >ETM32186.1 60S ribosomal protein L27a [Phytophthora parasitica] >ETM99782.1 60S ribosomal protein L27a [Phytophthora parasitica INRA-310] >ETO60610.1 60S ribosomal protein L27a [Phytophthora parasitica P1976] >ETP01717.1 60S ribosomal protein L27a [Phytophthora parasitica CJ01A1] >ETP29877.1 60S ribosomal protein L27a [Phytophthora parasitica P10297] >KUF86451.1 60S ribosomal protein L27a [Phytophthora nicotianae]) HSP 1 Score: 167.5 bits (423), Expect = 3.000e-38 Identity = 116/149 (77.85%), Postives = 130/149 (87.25%), Query Frame = 0 Query: 1 MPSRLSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXKNRTYTKSVNVDKLWSLAG---AEAFEAAKNGDKAPVLDVTQMGFFKVLGKGKLPSVPLVVKAKYFSKDAEKKIKAAGGATLLTA 147 MPSR SKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXX+NR + +VNV++LW+L E E AK+G KAPV+DVT+ G+FKVLGKG+LP VP++VKAKYFS +AEKKIKA GGA LLTA Sbjct: 1 MPSRFSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXRNRQHCPTVNVERLWTLVSEKTKEQAEKAKDG-KAPVIDVTKAGYFKVLGKGRLPEVPVIVKAKYFSAEAEKKIKAVGGACLLTA 148
BLAST of NO09G01130 vs. NCBI_GenBank
Match: OWZ14719.1 (60S ribosomal protein L27a, partial [Phytophthora megakarya]) HSP 1 Score: 166.8 bits (421), Expect = 5.100e-38 Identity = 116/148 (78.38%), Postives = 130/148 (87.84%), Query Frame = 0 Query: 2 PSRLSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXKNRTYTKSVNVDKLWSLAG---AEAFEAAKNGDKAPVLDVTQMGFFKVLGKGKLPSVPLVVKAKYFSKDAEKKIKAAGGATLLTA 147 PSR SKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXX+NR + +VNV++LW+L E E AK+G KAPV+DVT+ G+FKVLGKG+LP VP++VKAKYFS +AEKKIKAAGGA LLTA Sbjct: 1 PSRFSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXRNRQHCPTVNVERLWTLVSDKTKEQAEKAKDG-KAPVIDVTKAGYFKVLGKGRLPEVPVIVKAKYFSAEAEKKIKAAGGACLLTA 147
BLAST of NO09G01130 vs. NCBI_GenBank
Match: CBJ26345.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 165.6 bits (418), Expect = 1.100e-37 Identity = 113/147 (76.87%), Postives = 125/147 (85.03%), Query Frame = 0 Query: 1 MPSRLSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXKNRTYTKSVNVDKLWSLAGAEAFEAAK-NGDKAPVLDVTQMGFFKVLGKGKLPSVPLVVKAKYFSKDAEKKIKAAGGATLLTA 147 MPSR SKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXX +NR + VN+DKLWS+ E AK G KAPV+DVT G+FKVLGKGKLP+VP++V+AK FSK AE+KIKAAGGA LL+A Sbjct: 1 MPSRFSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXVLRNREHCPIVNLDKLWSMLPEGTMEQAKAGGGKAPVIDVTDNGYFKVLGKGKLPAVPIIVRAKIFSKLAEQKIKAAGGACLLSA 147
BLAST of NO09G01130 vs. NCBI_GenBank
Match: XP_008606613.1 (60S ribosomal protein L27a [Saprolegnia diclina VS20] >XP_012204946.1 60S ribosomal protein L27a [Saprolegnia parasitica CBS 223.65] >EQC40139.1 60S ribosomal protein L27a [Saprolegnia diclina VS20] >KDO24351.1 60S ribosomal protein L27a [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 165.6 bits (418), Expect = 1.100e-37 Identity = 86/148 (58.11%), Postives = 104/148 (70.27%), Query Frame = 0 Query: 1 MPSRLSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXKNRTYTKSVNVDKLWSLAGAEAFEAAKNG--DKAPVLDVTQMGFFKVLGKGKLPSVPLVVKAKYFSKDAEKKIKAAGGATLLTA 147 MP+ KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQH KNR + +VNV+K+WSL AE EAA+ KAP++DVT+ G+FKVLGKG+LP++P++VKAK+FS++AE KIKA GGA LLTA Sbjct: 1 MPTAAHKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHLLKNRLHCPTVNVEKIWSLVSAETKEAAEKSKDGKAPIIDVTKSGYFKVLGKGRLPAIPVIVKAKFFSQEAENKIKAVGGACLLTA 148
BLAST of NO09G01130 vs. NCBI_GenBank
Match: XP_009837571.1 (60S ribosomal protein L27a [Aphanomyces astaci] >ETV72785.1 60S ribosomal protein L27a [Aphanomyces astaci]) HSP 1 Score: 165.6 bits (418), Expect = 1.100e-37 Identity = 89/149 (59.73%), Postives = 106/149 (71.14%), Query Frame = 0 Query: 1 MPSRLSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHXXXXXXXXXXXXXXXXXXXXXXXXXKNRTYTKSVNVDKLWSLAGA---EAFEAAKNGDKAPVLDVTQMGFFKVLGKGKLPSVPLVVKAKYFSKDAEKKIKAAGGATLLTA 147 MP+ KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQH +NR + +VNV+KLWSL A E EA+K+G KAP++DVT+ G+FKVLGKG+LP+VP++VKAKYFS++AE KIKA GGA LLTA Sbjct: 1 MPTATHKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRQFHLLRNRYHCPTVNVEKLWSLVSAQVKETAEASKDG-KAPIIDVTKAGYFKVLGKGRLPAVPVIVKAKYFSQEAENKIKAVGGACLLTA 148 The following BLAST results are available for this feature:
BLAST of NO09G01130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G01130 ID=NO09G01130|Name=NO09G01130|organism=Nannochloropsis oceanica|type=gene|length=1814bpback to top protein sequence of NO09G01130.1 >NO09G01130.1-protein ID=NO09G01130.1-protein|Name=NO09G01130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=147bpback to top Synonyms
Publications
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