NO09G01040, NO09G01040 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G01040 vs. NCBI_GenBank
Match: EWM27682.1 (CS-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 303.1 bits (775), Expect = 8.100e-79 Identity = 162/239 (67.78%), Postives = 182/239 (76.15%), Query Frame = 0 Query: 19 VVLLFASTLPLCQGWFPRLCNAPPSSSRPHAS-RRARGLVLCVQGGGGPIGIGWVGDRYSWTENDWELEVTVPVPPETRKEDVLFKAAATSLKLGLVNSTEMLLGGKLKGRIALDGTYWSLEGFGPERAVKLLLEKKEGALENNMDWRRVLAEEAATETQYQEAEKFDTQEYVHQMLGPGGVNMSLVDKEMFGGLAGGVMRNVSRDTLREFVEAKVLGDASGL----GPSNMKNEDEEE 253 V + F +CQGWF C A P P+ +R RG V C+QGGGGP G+G V +YSWTEN+WE+ TRKEDVLFKAAATS+KLGLVNSTE+LLGGKL GRIALDGTYWSLEG G RAVKLLLEKK GALENNMDWRRVL+EEAATE +YQEAEKFDTQ Y+HQMLGPGGVNMSLVD+EMFGGLAGGVM NVS++ LRE+VE KVL DA+G+ G S E EE Sbjct: 30 VWISFVFCAGVCQGWF-LCCRARP----PYLMLQRTRGNVHCLQGGGGPGGVGRVAGKYSWTENEWEVXXXXXXXARTRKEDVLFKAAATSVKLGLVNSTELLLGGKLMGRIALDGTYWSLEGEGNARAVKLLLEKKLGALENNMDWRRVLSEEAATEVEYQEAEKFDTQAYIHQMLGPGGVNMSLVDREMFGGLAGGVMANVSQEALREYVEGKVLDDATGMASQGGRSGGGGEQHEE 263
BLAST of NO09G01040 vs. NCBI_GenBank
Match: EJK54452.1 (hypothetical protein THAOC_25915 [Thalassiosira oceanica]) HSP 1 Score: 84.7 bits (208), Expect = 4.500e-13 Identity = 73/232 (31.47%), Postives = 107/232 (46.12%), Query Frame = 0 Query: 42 PSSSRPHASRRARGLVLCVQGGGGPIGIGWVGDRYSWTENDWELEVTVPVPPETRKEDVLFKAAATSLKLGLVNSTEMLLG-GKLKGRIALDGTYWSLEG-FGPERAVKLLLEK------KEGALE-----NNMDWRRVLA--EEAATETQYQEAEKFDTQEYVHQM-LGPGGVNMSLVDKEMFGGLA--GGVMRNVS-RDTLREFVEAKVLGD--ASGLGPSNMKNEDEEE 253 PS R R RG G G V D+YSW E +E+EV V PP T +DV FK + + L L + T +L G K++G I +DGT+WS+EG ER V + +EK G + DW+ V E+ + +Y E E D +EY ++ + ++MS VDK +F A GG S +D +E + L +GL ++ D +E Sbjct: 27 PSKYRSADRSRGRGNSQVFSGVG-------VADKYSWNEEQFEIEVKVVAPPGTAAKDVKFKCKSDGVDLRLGDGTVLLDGERKVRGNICVDGTFWSIEGPVEEERTVTVTIEKHFLPTSSSGGTQTYDSATQFDWKGVYLNDEDEVSLREYDEPEVLDVREYASKLGVDIDNIDMSKVDKTLFSSKAAPGGEESEASKKDGFHFDIETETLDQLTRTGLAKEIVQQADGDE 251
BLAST of NO09G01040 vs. NCBI_GenBank
Match: GAX14257.1 (hypothetical protein FisN_1Hh452 [Fistulifera solaris]) HSP 1 Score: 84.3 bits (207), Expect = 5.900e-13 Identity = 75/245 (30.61%), Postives = 116/245 (47.35%), Query Frame = 0 Query: 33 WFPRLCNAP-----PSSSRPHASRR--ARGLVLCVQGGGGPIGIGWVGDRYSWTENDWELEVTVPVPPETRKEDVLFKAAATSLKLGLV-NSTEMLLGGK--LKGRIALDGTYWSLEGFGPE----RAVKLLLEKKEGALENNM-----DWRRVLAE--EAATETQYQEAEKFDTQEYVHQM-LGPGGVNMSLVDKEMFGGLAGGVMRNVSRDTLREFVEAKVLGDASGLGPSNMKNEDEEEDDV 256 WF C P P P A RR RG+VL GG G + Y W E +E++VTV VP ETR +D++F+ S+ L L + +LL G L+GR+ LDGTYW + + R V + +EK +++ DW+ V A E E Y E E+ + +EY + + +NMS+VDK MF N+++++L E +A ++ + + D+E + V Sbjct: 7 WFSFWCLWPVYEVVPFVISPRAVRRTPTRGIVLF--GGRG------IASGYRWKEEAFEIDVTVQVPKETRAKDIIFRPTVNSIDLRLKGDDAPVLLDGSRTLRGRVNLDGTYWVISDSEDKDDAFREVTVTIEKLIRTPQDDFEVVEYDWKGVYANDTEEVLERTYDEPEELNVREYAASLGVDIDNINMSMVDKTMF-----STGMNITKNSLDELNKAGLIKEITQQADGTEYEIDDEGNAV 238
BLAST of NO09G01040 vs. NCBI_GenBank
Match: CBJ26179.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 81.3 bits (199), Expect = 5.000e-12 Identity = 56/153 (36.60%), Postives = 77/153 (50.33%), Query Frame = 0 Query: 76 YSWTENDWELEVTVPVPPETRKEDVLFKAAATSLKLGLVNSTEMLLGGKLKGRIALDGTYWSLEGFGP--ERAVKLLLEK---KEGALENNM--DWRRVLAEEAATETQYQEAEK-FDTQEYVHQMLGPGGVNMSLVDKEMFGGLAGGVMRNV 221 YSWTE D ++EV VP+PP T + V TSL LGL +L G LKG++ D ++W++E E+ + L LEK E N+M DW VL E Y + +K FD EYV +M ++ VDK MF L + N+ Sbjct: 214 YSWTETDSDMEVRVPLPPGTAAKSVQLSVTKTSLTLGLKGREGPVLKGSLKGQVHADESHWTMEEMEDTGEKVLYLCLEKVADMEALAANSMPQDWVGVLEGEEPLNVYYPDKDKDFDVGEYVKRMGYDRERDIGKVDKAMFSDLTAEMKENL 366
BLAST of NO09G01040 vs. NCBI_GenBank
Match: GAX20066.1 (hypothetical protein FisN_1Lh452 [Fistulifera solaris]) HSP 1 Score: 81.3 bits (199), Expect = 5.000e-12 Identity = 74/243 (30.45%), Postives = 116/243 (47.74%), Query Frame = 0 Query: 33 WFPRLCNAP-----PSSSRPHASRRARGLVLCVQGGGGPIGIGWVGDRYSWTENDWELEVTVPVPPETRKEDVLFKAAATSLKLGLV-NSTEMLLGGK--LKGRIALDGTYW----SLEGFGPERAVKLLLEKKEGALENNM-----DWRRVLAE--EAATETQYQEAEKFDTQEYVHQM-LGPGGVNMSLVDKEMFGGLAGGVMRNVSRDTLREFVEAKVLGDASGLGPSNMKNEDEEEDDV 256 WF C P P P A R + + GG G V Y W E +E++VTV VP ETR +D++F+ S+ L L + +LL G L+GR+ LDGTYW S E R V + +EK +++ DW+ V A E E Y E E+ + +EY + + +NMS+VDK MF + G+ N+++++L E +A ++ + + + D+E + V Sbjct: 7 WFSFWCLWPMYEVVPFLIIPRAVRLTPTVGTVLFGGRG------VATSYRWKEEAFEIDVTVQVPKETRAKDIIFRPTVNSIDLRLKGDDAPVLLDGSRTLRGRVNLDGTYWVISDSEEKDDAFREVTVTIEKLIRTPQDDFEVVEYDWKGVYANDTEEVLERTYDEPEELNVREYAASLGVDIDNINMSMVDKTMF---SSGM--NITKNSLDELNKAGLIKEITQQADGTEYDIDDEGNAV 238
BLAST of NO09G01040 vs. NCBI_GenBank
Match: XP_002181698.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46912.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 73.2 bits (178), Expect = 1.400e-9 Identity = 55/189 (29.10%), Postives = 97/189 (51.32%), Query Frame = 0 Query: 72 VGDRYSWTENDWELEVTVPVPPETRKEDVLFKAAATSLKL-----------GLVNSTEMLLGG--KLKGRIALDGTYW---SLEGFGPERAVKLLLEK-----KEGALENNMDWRRVLAE--EAATETQYQEAEKFDTQEYVHQM-LGPGGVNMSLVDKEMFGGLAGGVMRNVSRDTLREFVEAKVLGD 237 + Y+W E +E++VTV VP + ++++F+ S+ L G + T +LL G KL+G++ LDGTYW L+ +R V + +EK K+ + DW+ + + E E +Y E EK + +EY ++ + ++MS+VDK MF + G+ N+++ + E +A L D Sbjct: 72 IATNYTWKEEAFEIDVTVTVPADVVAKNIIFQPTGRSIDLRYKSETKKGSNGDRSKTIVLLDGSRKLRGKVNLDGTYWVISDLQDDFAQRQVTVTIEKIVRTPKDDFEVVDYDWKGIYVDDTEEVLERKYDEPEKLNVREYAAKLGVDIDNIDMSMVDKTMF---SSGM--NLTQKNMDELTKAGYLSD 255
BLAST of NO09G01040 vs. NCBI_GenBank
Match: OEU21247.1 (hypothetical protein FRACYDRAFT_181258 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 67.0 bits (162), Expect = 9.700e-8 Identity = 59/211 (27.96%), Postives = 90/211 (42.65%), Query Frame = 0 Query: 72 VGDRYSWTENDWELEVTVPVPPETRKEDVLFKAAATSLKLGLVNSTEMLL----------------------GGKLKGRIALDGTYWSLEGFGPE-------------RAVKLLLEKKEGALENNM-----DWRRVLA--EEAATETQYQEAEKFDTQEYVHQM-LGPGGVNMSLVDKEMF-GGLAGGVMRNVSRDTLREFVEAKVLGDAS 239 + Y+W E +++E+ V VP ETR +D+ FK SL L L S KL+GRI LDGTYW + P+ V + +EK+ ++ DW V EE T +Y AE+ + ++Y M + ++M+LVDK MF GL NV++ TL EA ++ + + Sbjct: 65 IAPSYTWQEEAFDIEIIVKVPKETRAKDIHFKVKPNSLDLRLNASXXXXXXXXXXXXXXXXXXXXXXXXLDPSRKLRGRIVLDGTYWIISDPDPDDXXXXXXXXXXXXXEVTVTIEKQIRTPKDEFDIIEYDWNGVYEEDEEEVTYRKYDVAEELNVRDYAASMGVDIDNIDMNLVDKSMFTSGL------NVTKSTLDNMKEAGLMTEVT 269
BLAST of NO09G01040 vs. NCBI_GenBank
Match: OQR87688.1 (nuclear migration protein nudC-like protein [Achlya hypogyna]) HSP 1 Score: 65.5 bits (158), Expect = 2.800e-7 Identity = 42/120 (35.00%), Postives = 64/120 (53.33%), Query Frame = 0 Query: 57 VLCVQGGGGPIGIGWVGDRYSWTENDWELEVTVPVPPETRKEDVLFKAAATSLKLGLVNSTEMLLGGKLKGRIALDGTYWSLEGFGPERAVKLLLEKKEGALENNMDWRRVLAEEAATET 177 V+ G P+G G D+YSWT++ +L V++PVP T+ D+ K A TSL++ +N E L+ G L G+I + ++WSLE + L LEK W+ VL +A +T Sbjct: 111 VMTDDGKQVPVGNGGQTDKYSWTQSLQDLTVSLPVPKGTKSRDLSVKMAQTSLRVA-INGQEPLVDGALAGKIKTEESFWSLEA---NETLVLSLEK----APPQTWWKTVLQGDAEIDT 222
BLAST of NO09G01040 vs. NCBI_GenBank
Match: XP_012194949.1 (hypothetical protein SPRG_01339 [Saprolegnia parasitica CBS 223.65] >KDO34065.1 hypothetical protein SPRG_01339 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 65.1 bits (157), Expect = 3.700e-7 Identity = 46/141 (32.62%), Postives = 74/141 (52.48%), Query Frame = 0 Query: 39 NAPPSSS-RPHASRR--ARGLVLCVQGGGGPIGIGWVGDRYSWTENDWELEVTVPVPPETRKEDVLFKAAATSLKLGLVNSTEMLLGGKLKGRIALDGTYWSLEGFGPERAVKLLLEKKEGALENNMDWRRVLAEEAATET 177 +APP+++ RP S++ AR + L G P G G D+YSWT++ EL VT+PVP T+ D+ + + S+ + + + L+ G G+I ++ + WSL+ AV L LEK W+ VL +A +T Sbjct: 72 HAPPATTVRPPPSKQPDARPMALTDDGKQVPEGNGGRTDKYSWTQSLQELTVTIPVPAGTKSRDLDVRMTSASVHVAIKGHSAPLVHGTFPGKIKVEESLWSLDS---SEAVVLSLEK----ATPKTWWKSVLEGDAEIDT 205 The following BLAST results are available for this feature:
BLAST of NO09G01040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G01040 ID=NO09G01040|Name=NO09G01040|organism=Nannochloropsis oceanica|type=gene|length=777bpback to top protein sequence of NO09G01040.1 >NO09G01040.1-protein ID=NO09G01040.1-protein|Name=NO09G01040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=259bpback to top Synonyms
Publications
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