NO09G00980, NO09G00980 (gene) Nannochloropsis oceanica

Overview
NameNO09G00980
Unique NameNO09G00980
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1344
Alignment locationchr9:331722..333065 +

Link to JBrowse

Properties
Property NameValue
Description26s proteasome subunit 4
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:331722..333065 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
GO:0009056catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
[Close]
BLAST of NO09G00980 vs. NCBI_GenBank
Match: XP_008605817.1 (26S proteasome regulatory subunit 4 like A [Saprolegnia diclina VS20] >EQC40973.1 26S proteasome regulatory subunit 4 like A [Saprolegnia diclina VS20])

HSP 1 Score: 694.5 bits (1791), Expect = 2.200e-196
Identity = 348/398 (87.44%), Postives = 377/398 (94.72%), Query Frame = 0 
Query:   50 PSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            PS A RIP VFPT+KCKLRLLKL+RIKDFLL+EEEFI+NQEV +P +EKD+EER+KV+DLRG+P+ VG LEEMIDDNHAIVSSSVGPEYYV V+SFVNQD+LE GC+VLLHNKVMAVVGILS+DTDPMVSVMKV+KAPLESYADIGGL+ QIQEIKEAVELPLTHPELYE IGI+PPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPD+KTKRRIF IHT RM++SDDV+LE FVM+KDELSGADIKAVCTEAGLLALRERRM+VTQ DF KAKEKALY+KK NIP  +YL
Sbjct:   43 PSVATRIPAVFPTAKCKLRLLKLERIKDFLLMEEEFIKNQEVMKPKQEKDEEERSKVDDLRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVSVMSFVNQDMLEAGCSVLLHNKVMAVVGILSNDTDPMVSVMKVDKAPLESYADIGGLDQQIQEIKEAVELPLTHPELYEGIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIESLDPALIRPGRIDRKIEFPLPDVKTKRRIFAIHTSRMSLSDDVELEEFVMSKDELSGADIKAVCTEAGLLALRERRMRVTQTDFRKAKEKALYKKKANIPEGLYL 440
[Close]
BLAST of NO09G00980 vs. NCBI_GenBank
Match: XP_012201572.1 (26S proteasome regulatory subunit 4 A [Saprolegnia parasitica CBS 223.65] >KDO27797.1 26S proteasome regulatory subunit 4 A [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 694.5 bits (1791), Expect = 2.200e-196
Identity = 348/398 (87.44%), Postives = 377/398 (94.72%), Query Frame = 0 
Query:   50 PSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            PS A RIP VFPT+KCKLRLLKL+RIKDFLL+EEEFI+NQEV +P +EKD+EER+KV+DLRG+P+ VG LEEMIDDNHAIVSSSVGPEYYV V+SFVNQD+LE GC+VLLHNKVMAVVGILS+DTDPMVSVMKV+KAPLESYADIGGL+ QIQEIKEAVELPLTHPELYE IGI+PPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPD+KTKRRIF IHT RM++SDDV+LE FVM+KDELSGADIKAVCTEAGLLALRERRM+VTQ DF KAKEKALY+KK NIP  +YL
Sbjct:   43 PSVATRIPAVFPTAKCKLRLLKLERIKDFLLMEEEFIKNQEVMKPKQEKDEEERSKVDDLRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVSVMSFVNQDMLEAGCSVLLHNKVMAVVGILSNDTDPMVSVMKVDKAPLESYADIGGLDQQIQEIKEAVELPLTHPELYEGIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIESLDPALIRPGRIDRKIEFPLPDVKTKRRIFAIHTSRMSLSDDVELEEFVMSKDELSGADIKAVCTEAGLLALRERRMRVTQTDFRKAKEKALYKKKANIPEGLYL 440
[Close]
BLAST of NO09G00980 vs. NCBI_GenBank
Match: XP_008875734.1 (26S protease regulatory subunit 4 [Aphanomyces invadans] >ETV95541.1 26S protease regulatory subunit 4 [Aphanomyces invadans])

HSP 1 Score: 693.0 bits (1787), Expect = 6.300e-196
Identity = 347/396 (87.63%), Postives = 376/396 (94.95%), Query Frame = 0 
Query:   52 AAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            AA RIP VFPT+KCKLRLLKL+RIKDFLL+EEEFI+NQEV +P +EKD+EER+KV+DLRG+P+ VG LEEMIDDNHAIVSSSVGPEYYV V+SFVNQDLLE GC+VLLHNKVMAVVGILS+DTDPMVSVMKV+KAPLESYADIGGL+ QIQEIKEAVELPLTHPELYE IGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPD+KTKRRIF IHT RM+++DDVDLE F+M+KDELSGADIKAVCTE+GLLALRERRM+VTQ DF KAKEKALY+KK NIP  +YL
Sbjct:   45 AATRIPAVFPTAKCKLRLLKLERIKDFLLMEEEFIKNQEVMKPKQEKDEEERSKVDDLRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVSVMSFVNQDLLEAGCSVLLHNKVMAVVGILSNDTDPMVSVMKVDKAPLESYADIGGLDQQIQEIKEAVELPLTHPELYEGIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNSIESLDPALIRPGRIDRKIEFPLPDVKTKRRIFAIHTSRMSLADDVDLEEFIMSKDELSGADIKAVCTESGLLALRERRMRVTQTDFRKAKEKALYKKKANIPEGLYL 440
[Close]
BLAST of NO09G00980 vs. NCBI_GenBank
Match: OQR96066.1 (choline/Carnitine O-acyltransferase [Thraustotheca clavata])

HSP 1 Score: 690.6 bits (1781), Expect = 3.100e-195
Identity = 345/397 (86.90%), Postives = 376/397 (94.71%), Query Frame = 0 
Query:   50 PSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMY 447
            PS A RIP VFPT+KCKLRLLKL+RIKDFLL+EEEFI+NQEV +P +EKD+EER+KV+D+RG+P+ VG LEEMIDDNHAIVSSSVGPEYYV V+SFVNQD+LE GC+VLLHNKVMAVVGILS+DTDPMVSVMKV+KAPLESYADIGGL+ QIQEIKEAVELPLTHPELYE IGI+PPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPD+KTKRRIF IHT RM++S+DV+LE FVM+KDELSGADIKAVCTEAGLLALRERRM+VTQ DF KAKEKALY+KK NIP  +Y
Sbjct:  514 PSVATRIPAVFPTAKCKLRLLKLERIKDFLLMEEEFIKNQEVMKPKQEKDEEERSKVDDIRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVSVMSFVNQDMLEAGCSVLLHNKVMAVVGILSNDTDPMVSVMKVDKAPLESYADIGGLDQQIQEIKEAVELPLTHPELYEGIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNAIESLDPALIRPGRIDRKIEFPLPDVKTKRRIFAIHTSRMSLSEDVELEEFVMSKDELSGADIKAVCTEAGLLALRERRMRVTQTDFRKAKEKALYKKKANIPEGLY 910
[Close]
BLAST of NO09G00980 vs. NCBI_GenBank
Match: XP_009829202.1 (26S protease regulatory subunit 4 [Aphanomyces astaci] >ETV81344.1 26S protease regulatory subunit 4 [Aphanomyces astaci])

HSP 1 Score: 690.3 bits (1780), Expect = 4.100e-195
Identity = 345/396 (87.12%), Postives = 376/396 (94.95%), Query Frame = 0 
Query:   52 AAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            AA RIP VFPT+KCKLRLLKL+RIKDFLL+EEEFI+NQEV +P +EKD+EER+KV+DLRG+P+ VG LEEMIDDNHAIVSSSVGPEYYV V+SFVNQDLLE GC+VLLHNKVMAVVGILS+DTDPMVSVMKV+KAPLESYADIGGL+ QIQEIKEAVELPLTHPELYE IGI+PPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE+FRVADD +PSIVFIDEIDAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN IESLDPALIRPGRIDRKIEFPLPD+KTKRRIF IHT RM++++DVDLE F+M+KDELSGADIKAVCTE+GLLALRERRM+VTQ DF KAKEKALY+KK NIP  +YL
Sbjct:   45 AATRIPAVFPTAKCKLRLLKLERIKDFLLMEEEFIKNQEVMKPKQEKDEEERSKVDDLRGTPMGVGTLEEMIDDNHAIVSSSVGPEYYVSVMSFVNQDLLEAGCSVLLHNKVMAVVGILSNDTDPMVSVMKVDKAPLESYADIGGLDQQIQEIKEAVELPLTHPELYEGIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREMFRVADDHAPSIVFIDEIDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNSIESLDPALIRPGRIDRKIEFPLPDVKTKRRIFSIHTSRMSLAEDVDLEEFIMSKDELSGADIKAVCTESGLLALRERRMRVTQTDFRKAKEKALYKKKANIPEGLYL 440
[Close]
BLAST of NO09G00980 vs. NCBI_GenBank
Match: EJK59304.1 (hypothetical protein THAOC_20491 [Thalassiosira oceanica])

HSP 1 Score: 684.1 bits (1764), Expect = 2.900e-193
Identity = 341/398 (85.68%), Postives = 370/398 (92.96%), Query Frame = 0 
Query:   50 PSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            P+   RIP V P+SKCKLR++KL+RIKDFLL+E+EFIRN EVF+P EE+DQEER K+E+LRGSP+ VG LEE+IDDNHAIVSSS+GPEYYV +LS VNQDLLEPG +VLLHNK M+VVGIL DDTDPMVSVMKVEKAPLESYADIGGLE QIQEIKEAVELPL HPELYEDIGI+PPKGVILYG PGTGKTLLAKAVAN TSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSP+IVFIDE+DAVGSKRYDS+SGGTREIQRTMLELLNQLDGFDER DVKVIMATNKIESLDPALIRPGRIDRKIEFPLPD+KTKR IF IHT +MT+ +DVDLE FVMAKDELSGADIKAVCTEAG+LALRERRMKV Q+DFVKAKEKALYRKKGN+P  +YL
Sbjct:   52 PTGIQRIPTVVPSSKCKLRMMKLERIKDFLLMEQEFIRNHEVFKPREERDQEEREKLEELRGSPMGVGTLEELIDDNHAIVSSSMGPEYYVNILSSVNQDLLEPGSSVLLHNKTMSVVGILEDDTDPMVSVMKVEKAPLESYADIGGLEDQIQEIKEAVELPLAHPELYEDIGIKPPKGVILYGVPGTGKTLLAKAVANHTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPTIVFIDEVDAVGSKRYDSSSGGTREIQRTMLELLNQLDGFDERADVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDVKTKRHIFNIHTSKMTLGEDVDLEKFVMAKDELSGADIKAVCTEAGMLALRERRMKVCQDDFVKAKEKALYRKKGNVPEGLYL 449
[Close]
BLAST of NO09G00980 vs. NCBI_GenBank
Match: XP_002286831.1 (26S proteasome ATPase regulatory subunit 4 [Thalassiosira pseudonana CCMP1335] >EED96472.1 26S proteasome ATPase regulatory subunit 4 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 683.3 bits (1762), Expect = 5.000e-193
Identity = 340/398 (85.43%), Postives = 368/398 (92.46%), Query Frame = 0 
Query:   50 PSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            PS   RIP V P SKCKLR++KL+RIKDFLL+E+EFIRN EVF+P EE+DQEER K+E+LRGSP+ VG+LEE+IDDNHAIVSSS+GPEYYV +LS VNQDLLEPG  VLLHNK M+VVGIL DD DPMVSVMKVEKAPLESYADIGGLE QIQEIKEAVELPL HPELYEDIGI+PPKGVILYGEPGTGKTLLAKAVAN TSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSP+IVFIDEIDAVGSKRYDS+SGGT+EIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFP PD KTKR IF IHT +MT+ +DVDLE F+M+KDELSGADIKA+CTEAG+LALRERRM+V QEDFVKAKEKALYRKKGNIP  +YL
Sbjct:   44 PSGIQRIPTVLPASKCKLRMMKLERIKDFLLMEQEFIRNHEVFKPREERDQEEREKLEELRGSPMGVGSLEELIDDNHAIVSSSMGPEYYVNILSSVNQDLLEPGSAVLLHNKTMSVVGILEDDADPMVSVMKVEKAPLESYADIGGLEDQIQEIKEAVELPLAHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANHTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPTIVFIDEIDAVGSKRYDSSSGGTKEIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPFPDTKTKRHIFNIHTSKMTLGEDVDLEKFIMSKDELSGADIKAICTEAGMLALRERRMRVVQEDFVKAKEKALYRKKGNIPEGLYL 441
[Close]
BLAST of NO09G00980 vs. NCBI_GenBank
Match: GAX24811.1 (hypothetical protein FisN_18Lh106 [Fistulifera solaris])

HSP 1 Score: 681.4 bits (1757), Expect = 1.900e-192
Identity = 340/398 (85.43%), Postives = 368/398 (92.46%), Query Frame = 0 
Query:   50 PSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            P+   + P + P SKCKLR+LKLDR+KDFLLLEEEFIRN EVF+P EE+DQEER K+E+LRG+PL VG LEE+IDDNHAI+SSSVGPEYYV +LS VNQDLLEPG ++L HNK M+VVGIL DDTDPMVSVMKVE AP E+YAD+GGLE+QIQEIKEAVELPL HPELYEDIGI+PPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSP+IVFIDEIDAVGSKRY+S+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN+IESLDPALIRPGRIDRKIEFPLPD KTKR IF IHT RMT+SDDVDLE FVMAKD+LSGADIKAVCTEAG+ ALRERRMKV QEDFVKAKEKALYRKKGN+P  MYL
Sbjct:   59 PTGLNKTPTIVPNSKCKLRMLKLDRVKDFLLLEEEFIRNHEVFKPAEERDQEEREKLEELRGTPLGVGTLEELIDDNHAIISSSVGPEYYVNILSSVNQDLLEPGSSILFHNKTMSVVGILQDDTDPMVSVMKVENAPEETYADVGGLEAQIQEIKEAVELPLAHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPTIVFIDEIDAVGSKRYESSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNRIESLDPALIRPGRIDRKIEFPLPDTKTKRHIFNIHTSRMTLSDDVDLEKFVMAKDDLSGADIKAVCTEAGMHALRERRMKVCQEDFVKAKEKALYRKKGNVPEGMYL 456
[Close]
BLAST of NO09G00980 vs. NCBI_GenBank
Match: GAX17900.1 (26S proteasome regulatory subunit T2 [Fistulifera solaris])

HSP 1 Score: 681.4 bits (1757), Expect = 1.900e-192
Identity = 340/398 (85.43%), Postives = 368/398 (92.46%), Query Frame = 0 
Query:   50 PSAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            P+   + P + P SKCKLR+LKLDR+KDFLLLEEEFIRN EVF+P EE+DQEER K+E+LRG+PL VG LEE+IDDNHAI+SSSVGPEYYV +LS VNQDLLEPG ++L HNK M+VVGIL DDTDPMVSVMKVE AP E+YAD+GGLE+QIQEIKEAVELPL HPELYEDIGI+PPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSP+IVFIDEIDAVGSKRY+S+SGGTREIQRTMLELLNQLDGFDERGDVKVIMATN+IESLDPALIRPGRIDRKIEFPLPD KTKR IF IHT RMT+SDDVDLE FVMAKD+LSGADIKAVCTEAG+ ALRERRMKV QEDFVKAKEKALYRKKGN+P  MYL
Sbjct:   54 PTGLNKTPTIVPNSKCKLRMLKLDRVKDFLLLEEEFIRNHEVFKPAEERDQEEREKLEELRGTPLGVGTLEELIDDNHAIISSSVGPEYYVNILSSVNQDLLEPGSSILFHNKTMSVVGILQDDTDPMVSVMKVENAPEETYADVGGLEAQIQEIKEAVELPLAHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPTIVFIDEIDAVGSKRYESSSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNRIESLDPALIRPGRIDRKIEFPLPDTKTKRHIFNIHTSRMTLSDDVDLEKFVMAKDDLSGADIKAVCTEAGMHALRERRMKVCQEDFVKAKEKALYRKKGNVPEGMYL 451
[Close]
BLAST of NO09G00980 vs. NCBI_GenBank
Match: XP_017229754.1 (PREDICTED: 26S proteasome regulatory subunit 4 homolog A [Daucus carota subsp. sativus] >KZN12047.1 hypothetical protein DCAR_004703 [Daucus carota subsp. sativus])

HSP 1 Score: 667.2 bits (1720), Expect = 3.700e-188
Identity = 329/396 (83.08%), Postives = 368/396 (92.93%), Query Frame = 0 
Query:   52 AAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQEERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDLLEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSKRYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIRPGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGADIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL 448
            AA RIP V P +KCKLRLLKLDRIKD+LL+EEEF+ NQE  +P EEK +E+R+KV+DLRGSP++VGNLEE+ID+NHAIVSSSVGPEYYVG+LSFV++D LEPGC +L+HNKV++VVG+L DD DPMVSVMKVEKAPLESYADIGGL++QIQEIKEAVELPLTHPELYEDIGI+PPKGVILYGEPGTGKTLLAKAVAN TSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVG+KRYD++SGG REIQRTMLELLNQLDGFD RGDVKVI+ATNKIESLDPAL+RPGRIDRKIEFPLPDIKTKRRIF IHT RMT+SDDV+LE FVM KDELSGADIKA+CTEAGLLALRERRMKVT  DF KAK+K +++KK  +P  +Y+
Sbjct:   48 AAARIPTVTPLTKCKLRLLKLDRIKDYLLMEEEFVANQERLKPQEEKTEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDDVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNKIESLDPALLRPGRIDRKIEFPLPDIKTKRRIFQIHTSRMTLSDDVNLEEFVMTKDELSGADIKAICTEAGLLALRERRMKVTHPDFKKAKDKVMFKKKEGVPEGLYM 443
The following BLAST results are available for this feature:
BLAST of NO09G00980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_008605817.12.200e-19687.4426S proteasome regulatory subunit 4 like A [Saprol... [more]
XP_012201572.12.200e-19687.4426S proteasome regulatory subunit 4 A [Saprolegnia... [more]
XP_008875734.16.300e-19687.6326S protease regulatory subunit 4 [Aphanomyces inv... [more]
OQR96066.13.100e-19586.90choline/Carnitine O-acyltransferase [Thraustotheca... [more]
XP_009829202.14.100e-19587.1226S protease regulatory subunit 4 [Aphanomyces ast... [more]
EJK59304.12.900e-19385.68hypothetical protein THAOC_20491 [Thalassiosira oc... [more]
XP_002286831.15.000e-19385.4326S proteasome ATPase regulatory subunit 4 [Thalas... [more]
GAX24811.11.900e-19285.43hypothetical protein FisN_18Lh106 [Fistulifera sol... [more]
GAX17900.11.900e-19285.4326S proteasome regulatory subunit T2 [Fistulifera ... [more]
XP_017229754.13.700e-18883.08PREDICTED: 26S proteasome regulatory subunit 4 hom... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010574NSK010574Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G00980.1NO09G00980.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589192gene_4458Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100104g13gene2870Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G00980.1NO09G00980.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G00980 ID=NO09G00980|Name=NO09G00980|organism=Nannochloropsis oceanica|type=gene|length=1344bp
ATGGGACAAGGAGCTCCGGGGGGCATGCCTCCGCCGGGCGGGCAAGGCCC
TGGTCAGGGCGAGCAGAAGAAGGAGGACAAGACCAAGAAAAAGAAATTTG
AACCCCGCCCGGCGGCTAGGAGCGGGCGTCGCCGTCGTCGCAAGGGCCCT
TCCGCAGCCGTTCGCATCCCGCAAGTTTTTCCCACGTCCAAGTGCAAGCT
ACGACTGCTCAAGCTTGACCGTATCAAGGATTTCTTATTGCTGGAGGAGG
AGTTTATCCGCAACCAGGAAGTGTTTCGTCCCCATGAGGAGAAGGACCAG
GAGGAACGGGCCAAGGTAGAGGACCTGCGGGGCAGTCCCTTGGCGGTTGG
GAACCTGGAGGAGATGATCGACGACAACCACGCAATTGTCTCATCCTCGG
TAGGCCCCGAGTACTACGTGGGCGTGCTGTCTTTTGTGAACCAGGACTTG
CTGGAACCCGGGTGCACGGTGCTGCTGCACAACAAGGTGATGGCGGTGGT
GGGCATCTTGTCAGACGACACAGACCCTATGGTTTCTGTCATGAAGGTGG
AGAAGGCCCCCCTGGAATCCTATGCCGACATTGGCGGGCTGGAGTCGCAG
ATCCAGGAGATCAAGGAGGCGGTAGAGCTGCCCTTGACCCACCCAGAGCT
TTACGAGGACATAGGTATTCGGCCCCCCAAGGGCGTCATTCTGTATGGCG
AGCCAGGCACGGGGAAGACCTTACTAGCCAAGGCCGTAGCCAACCAGACA
TCGGCAACATTCTTGCGCGTGGTGGGCTCGGAGCTAATTCAGAAGTATCT
AGGTGATGGTCCCAAGTTGGTGCGGGAGCTCTTTCGGGTGGCGGACGACT
TGTCACCGTCAATTGTGTTTATCGATGAGATTGACGCGGTGGGTTCCAAG
CGGTATGATTCCAACTCGGGGGGCACGCGGGAGATCCAGCGGACGATGTT
GGAGTTGTTGAACCAGCTGGATGGTTTTGATGAGCGGGGAGACGTTAAGG
TGATCATGGCTACTAATAAAATTGAGTCCCTCGATCCTGCCCTTATTCGT
CCCGGGCGAATTGATCGAAAGATTGAATTTCCCCTTCCAGATATCAAGAC
AAAGCGTCGAATTTTCGGGATCCACACGGGGCGGATGACCATGAGCGATG
ACGTGGACTTGGAAGTGTTCGTCATGGCGAAGGACGAGCTGAGCGGCGCG
GACATCAAGGCGGTGTGCACCGAGGCGGGGCTGTTGGCGCTGCGGGAGAG
GAGGATGAAGGTGACTCAGGAGGACTTTGTCAAGGCCAAGGAGAAGGCGT
TGTACCGGAAGAAGGGCAACATCCCCGTCTCTATGTACTTGTAA
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protein sequence of NO09G00980.1

>NO09G00980.1-protein ID=NO09G00980.1-protein|Name=NO09G00980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=448bp
MGQGAPGGMPPPGGQGPGQGEQKKEDKTKKKKFEPRPAARSGRRRRRKGP
SAAVRIPQVFPTSKCKLRLLKLDRIKDFLLLEEEFIRNQEVFRPHEEKDQ
EERAKVEDLRGSPLAVGNLEEMIDDNHAIVSSSVGPEYYVGVLSFVNQDL
LEPGCTVLLHNKVMAVVGILSDDTDPMVSVMKVEKAPLESYADIGGLESQ
IQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANQT
SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGSK
RYDSNSGGTREIQRTMLELLNQLDGFDERGDVKVIMATNKIESLDPALIR
PGRIDRKIEFPLPDIKTKRRIFGIHTGRMTMSDDVDLEVFVMAKDELSGA
DIKAVCTEAGLLALRERRMKVTQEDFVKAKEKALYRKKGNIPVSMYL*
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Synonyms
Publications