|
|
Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr9 | genome | chr9:225112..228604 - |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO09G00570 vs. NCBI_GenBank
Match: CBN77223.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 115.5 bits (288), Expect = 2.900e-22 Identity = 67/231 (29.00%), Postives = 122/231 (52.81%), Query Frame = 0
Query: 79 AWAAPSTTANDKQTTSRLIKKTGVKEEPKSLKEENKDL--------SDVIARGMIRL---------PEIEGYPFGPERPAQLNYALENNDAALLITCYGREGGPVAAKKIKLQGLEFPYTFELTFNNLLFPLTKETWEKDNRAFDDLGISALLDLDGKFSTANENDLLGFGISKPVAIAGSQIRRDALIQVTARTGVKQYTDEE---------QRLLSTIDLELARQAQGG 284
A+AA A + L+KKT + + E K L D+IAR ++ + P+ G+P A++ +DA L++ +G++G PVAAK++ ++G +FP T ELT ++L FPLTK+ W D+R+ +D+G++ +D DG+ +T + L G+G+SKP+ I R +A +++ A +K+ ++ +R+ + +D + A+ +GG
Sbjct: 83 AFAADRAGAQELSPAEMLVKKTTDMQRKRLKDESQKQLQGDVTMQEGDLIARVLVSIKQDLYDLGAPDTTGFP-----------AVDTDDARLIVAAFGKDGPPVAAKRLAVKGRQFPVTVELTADDLAFPLTKDAWRLDSRSKEDIGLAVEIDPDGRAATLDSESLTGYGVSKPLRIGAQLERTEAAVELVANPQLKERAEQALPNEGIQQLERVDAMLDYKEAKAPKGG 302
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G00570 ID=NO09G00570|Name=NO09G00570|organism=Nannochloropsis oceanica|type=gene|length=3493bp
CGGGACCACTGAATCTCTCGTTGTGATGAAGTTGATATTATAGTACTTTT
CTTTTATTCAGGACTCATTCACATACAGTATGCTACACTTCTCAATCTTG
AGTTGACACGGATACTGCTGCTGCTGCTGCTGCTTCCGTGCTACCACTTC
CTCCTCCTGAGGCATCCCACTCAGCTTGAACCGACCAAGGTAAAATATCT
CGAATGCTAAGTACGTGATACTGCCTCCGCAACCTCTGTTGTGTATGGCC
CGATGCCGGCGCCTTGGTGGCTGCTGCCGCTGCCGTTGCCGTTAACAGCG
CAGCATCTTGACTTGCCGCTGCCGAGAAGGGGACGGTAGAGAAGTAGCCA
TTGCATGGGTTACAATCACCATCGACCGTGCTTATACCTACCGCTGCTGT
CCCTCCGATACCTCCTACATCCTGGAAATGAGGAGAGGGCGCAGGTCCCA
CGGCGGTACACCACAAATAACATCCATCCGGCGGCAAAGCCAAAAACCGA
AGCTTCCAATCGGCCATGCCATACCCATCCATCATCAACTCCTCCTCTTC
CCCTTCATCTTCTACCCTCTTCAAATAATCCTTCCCAACGTCCAGGATAC
TGCATTCCAATCGTCGAATGGGAAACGACAATCCCACTCCCAATGCCTTG
ATATAAGCCTCCTTCATCGCCCACACCCGGAAGAACGCACGATACTGAGC
AGTCTCCCCTTTCGGTGCCAATCCCTCCAATCCATCGCGCTCTGCCGGCG
TCAAATGACGGCGGAAAAGGTCGATATACTCCGATGCTGTCATGGCCTGG
AAAGGCCGATCCTGCAAGCACACCACATCTGTCCCTACTGTACCCGAAGG
CTCGCTGGCCAGCACTACCCAATCCCCGTGATGCGACACATTGTAGTTCC
ACCCAGGAAGCCGTGTCCCCGCCGCTTCCACATAGGGCTTGTTATATGGT
TGTGTGCGTTGGATTAGGATGTCCTTGAAGCGCTGACCCAAAACCCAACT
GGTAGCAGCGCGCTGCAGTAGCAGGCTTCCCAACGCCAGCCGCCTGTCCT
TGTCGTGGTAGAAACCCTGCAGCTTGTGTACATCGCCCTCGGGTAAGAGC
GAAAGAAGTAGCTCCCGTTGTCCGGGGGTTATGGTCTCCGTACCAATCTG
CAGGCCCAGCCGGAGTATGCCCTGCTCGAAAGCGGGGGCTCGACCATCCA
CAATCATACATGCGGGGATGGGCGGCGTGTGAGGGTCTGCGACTGCAACT
GCGGCGGGGGCGGCCGATGGTGGAGCTGGATTCGTGGTCGCCGCTGCTGC
GGGTAGTGATATGGATGGGACCAGAGTAGCTACGGCCGCGACGGGCCAGC
AACACGGACAGCAGTATGGCCCCATTTGCTGTCGAGGCGGGAGCGAAGGA
AGGAGGAGGTTGCTTTGAGGCTTGTTGGTTGTGAGGATTGCACTGGCAGC
AGTCTGTGCGACCTTGCTCGAGCTTATACCCTATCCGTGGCCCGCTCAGT
CCTGGCTTGGTCGCCATGGCAGCATTTGGACTGTGCGTGGCGTGTGCGGG
TTGTACCTCAAGACGGTTCAGAGAGCGAGCATCATGTTGACCCTCACTCC
CGACCTCAACCAGCAGCGCCTTAGTCTCCTCCTGACTGGACAATGCCATC
CATTACTCCCACCACTGCGCACACAACACACAGCGACCTTGTCTAAGCAG
TCAGCAGAATGATTCGAGGTGGTGTCGTGGCAGCAGCGGGGCTGTTGCTT
TTGAGCCCGTGCTTTGCCTTCATGCCTACGCCTCTTGCCCATAGAGGGGC
CAGCAGAATGGTTATGCAGGCCGACAAGGGCGAGCGAGGCAAGAGTAAGA
TCCCAGCTGTCGGCATGTCTGTGGTGGGGCGTTCGCTTGCCGCAACCGGT
GTGCTATTGTCAACCTTCCTGGGGGGCGGAGGACTGCCTGGTGCGTGGGC
AGCGCCATCGACGACGGCTAATGACAAGCAGACGACATCAAGACTGgtgc
gtacacattgatggaggtctagacgtggcgtggcgtcgcgtgatggtttt
gtggctgtgtgatacacatgctcgggccctctactgccccccgcgttgct
atcttctctatccacgatactcctctcccttcccatcactccaacctgtt
ccctcatctcttcccgattacacatcaattcagATCAAGAAAACAGGAGT
CAAGGAGGAGCCGAAATCGCTGAAAGAGGAGAACAAGGATCTGTCCGACG
TGATTGCCCGGGGCATGATTCGGCTGCCGGAGATTGAGGGTTATCCCTTT
GGGCCTGAGCGACCGGCACAACTGAACTACGCGCTGGAGAACAATGATGC
CGCCCTCCTCATCACGTGCTATGGGCGGGAAGGTGGACCAGTAGCCGCGA
AAAAgtgagttcgactatcacggctgatggtatatccgttcgcattcctg
gaaactcactcgcgtgcttctccccacctccctctctctcttgatgacag
GATCAAGCTGCAAGGCTTAGAATTTCCCTACACCTTCGAGCTCACCTTCA
ACAATTTGCTCTTCCCCCTGACTAAGGAAACCTGGGAGAAAGATAACCGC
GCATTTGACGACCTTGGTATCTCCGCCTTGCTAGACCTGGACGGAAAGTT
CTCCACTGCCAATGAAAATGATCTTTTGGGCTTCGGGATTTCCAAGCCTG
TGGCTATTGCAGGCAGCCAGgtacgagaatggcgggtcgagagtgtcctc
gtttagtacgggagtggtaaacgtgttgcaattcagttattttttggccc
tgagctccttggtgtatctcatactcaaatgaacccttgcttcctggctt
ttcctttctttcttcttcatttctagATCCGCCGGGACGCCCTTATCCAA
GTGACGGCCCGCACGGGCGTGAAGCAATACACAGACGAAGAGCAACGCCT
CCTGTCCACGATTGATTTGGAGTTGGCCCGGCAGGCTCAAGGGGGGAGTT
TGGCGCAGCTGGCACAGGAGAATGGTGGCGGCAACATTGAGGTGCTCACA
AACCAACGCCAGACCGAGCCTGCAGATCCAGCTTCAAGTGTAAAACGCGA
ATGATAGAAAGCAGGGCAGGGGAGAGGAAGGGAAAGGAGGAGAGCTTTTC
TTATTTTTTGTCCACTCGGTGACCGACAAAAAATGCGTGAAGGGAAAAAA
AGAAAGAGCTGACTGCTTTCCGACTAGTTTACTAGGTCCCAACAACAGCA
CCGCGCGCGCCTAAAAGAAAAAAGAGTATCCCGCCTTACTTTGTTTTGTT
TTTTTCTTTCGGTGATATTGCCCGTGAAGGTGAGTGGGTGGGCACATATC
CAGGGAGGGGGGAAGAGGGGAGGTCGAAATGGCGAGAAGCTCAACTTGGG
CCTGCCTCTGGATACACACGCACACGTGTTGTGCCTGGTCCAAGCCCCAT
TCTAGGTGGCAAATTCTCTCCAAATCCTCAGACCTGCTTTATG back to topprotein sequence of NO09G00570.1 >NO09G00570.1-protein ID=NO09G00570.1-protein|Name=NO09G00570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=319bp
MIRGGVVAAAGLLLLSPCFAFMPTPLAHRGASRMVMQADKGERGKSKIPA
VGMSVVGRSLAATGVLLSTFLGGGGLPGAWAAPSTTANDKQTTSRLIKKT
GVKEEPKSLKEENKDLSDVIARGMIRLPEIEGYPFGPERPAQLNYALENN
DAALLITCYGREGGPVAAKKIKLQGLEFPYTFELTFNNLLFPLTKETWEK
DNRAFDDLGISALLDLDGKFSTANENDLLGFGISKPVAIAGSQIRRDALI
QVTARTGVKQYTDEEQRLLSTIDLELARQAQGGSLAQLAQENGGGNIEVL
TNQRQTEPADPASSVKRE* back to top
|