NO09G00480, NO09G00480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G00480 vs. NCBI_GenBank
Match: EWM27704.1 (CRAL-TRIO domain protein [Nannochloropsis gaditana]) HSP 1 Score: 358.2 bits (918), Expect = 2.300e-95 Identity = 174/231 (75.32%), Postives = 196/231 (84.85%), Query Frame = 0 Query: 21 ITSPPRPNLRGSTDGSSHPLSASFTSALPSVAHPDVFAEMQAKIVELASEDNVSPYNEEDMLNRVLVARNLHVAEAFHMWQNIVAWRKQYQPEFLSEEEAAPYLKLGVISTCGPDVNGRPCIYALNRNHLIDAEHHDRNLRTIVNVLEKTTVESSKIADGFIAVIIDQEGVGRKNMDTHLFIGKPGLVQVLQEYYPERLGSCYIIHTSWIFRLMWAIISPFLDDKTRKKVH 252 I+ P P+L G+ S S+S+ LPSV H +F E+ AKI ELA EDNV PYN+ED+LNRVLVARNL V EAF MW NIVAWRK YQP+ LSEEEAAPYL GV+S CGPD GRPCIYALNRNH+IDAE+HD NLRTIVN+LEKTTVES++ ADGFIAVIIDQEGVGRKNMDT+LF+GKPGLVQ+LQEYYPERLGSCYI+HTSWIFRLMWAIISPFLD+KTR+KVH Sbjct: 77 ISHRPVPSL-GNKASSEKNHSSSYFLDLPSVNHKAIFEELLAKITELAPEDNVPPYNDEDLLNRVLVARNLQVPEAFRMWMNIVAWRKHYQPQILSEEEAAPYLSKGVVSICGPDKQGRPCIYALNRNHIIDAENHDSNLRTIVNLLEKTTVESTRTADGFIAVIIDQEGVGRKNMDTNLFVGKPGLVQILQEYYPERLGSCYILHTSWIFRLMWAIISPFLDEKTRRKVH 306
BLAST of NO09G00480 vs. NCBI_GenBank
Match: EWM30222.1 (cral trio domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 172.9 bits (437), Expect = 1.400e-39 Identity = 86/218 (39.45%), Postives = 134/218 (61.47%), Query Frame = 0 Query: 55 DVFAEMQAKIVELASEDNVSPYNEEDMLNRVLVARNLHVAEAFHMWQNIVAWRKQYQPEFLSEEEAAPYLKLGVISTCGPDVNGRPCIYALNRNHLIDAEHHDRNLRTIVNVLEKTTVESSKIA-DGFIAVIIDQEGVGRKNMDTHLFIGKPGLVQVLQEYYPERLGSCYIIHTSWIFRLMWAIISPFLDDKTRKKVHVLPHTEDLLQYFSLDRLPAD 272 DV AE+ AKI A +S ++ +L+R+L+AR+LHV +A+ +W+ AWR+ +PE + E AP L + +S G D +GR C+ RNH+ + LR + VLE +T S K + G+I I D +G G +N+DT L KPG++ +++EYYPE L + I++++W+FR+ W +I PF+D++T+ KVHVL LL+YF LP+D Sbjct: 13 DVMAELGAKI---AQHPTLSHHSSPAVLSRMLLARHLHVDDAYVLWEGWAAWREDEKPELIDEASVAPQLAVQTVSVTGMDKSGRTCVILRTRNHVPGQFPFEDMLRLTIWVLETSTSRSVKTSGTGYITAIWDCKGQGFRNLDTALATHKPGIIHIMKEYYPECLQTLLIVNSNWVFRVFWTVIYPFIDERTKHKVHVLKDEAALLEYFHPQDLPSD 227
BLAST of NO09G00480 vs. NCBI_GenBank
Match: OMJ83991.1 (hypothetical protein SteCoe_14977 [Stentor coeruleus]) HSP 1 Score: 137.9 bits (346), Expect = 5.000e-29 Identity = 71/210 (33.81%), Postives = 117/210 (55.71%), Query Frame = 0 Query: 59 EMQAKIVELASEDNVSPYNEEDMLNRVLVARNLHVAEAFHMWQNIVAWRKQYQPEFLSEEEAAPYLKLGVISTCGPDVNGRPCIYALNRNHLIDAEHHDRNLRTIVNVLEKTTVESSKIADGFIAVIIDQEGVGRKNMDTHLFIGKPGLVQVLQEYYPERLGSCYIIHTSWIFRLMWAIISPFLDDKTRKKVHVLPHTEDLLQYFSLDRL 269 E+ I E+ E+ Y +DML RVL AR+L V A+ MWQ WRK Y+ + ++EEE ++K G G D GRPC+ R H + + +R ++ ++E+ + + G + VI D+ + N D +L GL +LQ++Y ERLG+ YI+H +W++ L++ + P L+ KTR K+H+L + E L ++F+ +L Sbjct: 17 ELTKLIHEITDEEK---YTNQDMLIRVLRARDLKVQPAYEMWQKWYRWRKDYRADEITEEEMKEHIKTGKAFFFGEDNEGRPCLIVRARYHWPNQFALEETMRYVIYLVEQGVKLADEKHTGQMCVIYDRGDISSANKDGNLIELGKGLAAMLQDFYAERLGAVYILHVNWLYWLIFQAVKPLLNKKTRNKIHILRNVEGLKEHFNPSQL 223
BLAST of NO09G00480 vs. NCBI_GenBank
Match: XP_001013324.1 (divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210] >EAR93079.1 divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210]) HSP 1 Score: 136.3 bits (342), Expect = 1.400e-28 Identity = 73/219 (33.33%), Postives = 119/219 (54.34%), Query Frame = 0 Query: 57 FAEMQAKIVELA-----SEDNV--SPYNEEDMLNRVLVARNLHVAEAFHMWQNIVAWRKQYQPEFLSEEEAAPYLKLGVISTCGPDVNGRPCIYALNRNHLIDAEHHDRNLRTIVNVLEKTTVESSKIADGFIAVIIDQEGVGRKNMDTHLFIGKPGLVQVLQEYYPERLGSCYIIHTSWIFRLMWAIISPFLDDKTRKKVHVLPHTEDLLQYFSLDRL 269 F E++AK+VE ED V Y E++ R+L AR V +AF MW+ V WR ++ + + EE+ A L+ G G D G PC+ + H D LR + +LE+ + + G ++VI D+EG +KN D++LF L Q++Q+ Y ERL + YI+H +W F+ ++A++ PFL +T+ K+ ++ TE+L ++F L Sbjct: 25 FNELKAKVVEQCKKMKLDEDQVKFDRYTEDNQCVRLLWAREFKVEKAFEMWKKWVDWRIDFKADEIKEEDVASELQSGKAFWHGMDKQGNPCLVVKVKYHRPGVSSQDVVLRYFLYLLEEGISKCEQAGTGKVSVIWDREGFDKKNFDSNLFSTFKKLNQIMQDNYAERLSTIYILHPNWFFKTIYAVVKPFLTSRTKSKITIVDKTEELKKFFEPSEL 243
BLAST of NO09G00480 vs. NCBI_GenBank
Match: OMJ67334.1 (hypothetical protein SteCoe_35521 [Stentor coeruleus]) HSP 1 Score: 125.9 bits (315), Expect = 1.900e-25 Identity = 65/193 (33.68%), Postives = 105/193 (54.40%), Query Frame = 0 Query: 76 YNEEDMLNRVLVARNLHVAEAFHMWQNIVAWRKQYQPEFLSEEEAAPYLKLGVISTCGPDVNGRPCIYALNRNHLIDAEHHDRNLRTIVNVLEKTTVESSKIADGFIAVIIDQEGVGRKNMDTHLFIGKPGLVQVLQEYYPERLGSCYIIHTSWIFRLMWAIISPFLDDKTRKKVHVLPHTEDLLQYFSLDRL 269 Y +DML RVL AR+L V A+ MW K Y+ + ++EEE ++K G G D GRPC+ R H + + +R ++ ++E+ + + G I VI D+ + N D +L L +LQ++Y ERLG+ YI+H +W++ L++ I P L+ KTR K+H+L + E L ++F +L Sbjct: 31 YTNQDMLLRVLRARDLKVQAAYEMWXXXXXXXKDYRADEITEEEMKEHIKTGKAFFFGEDNEGRPCLIVRARYHWPNQFSLEETMRYVIYLVEQGVKLADERHTGQICVIYDRGDISSANKDGNLIELGKSLAAMLQDFYAERLGAVYILHVNWLYWLIFQAIKPLLNKKTRNKMHILRNAEGLKEHFHPSQL 223
BLAST of NO09G00480 vs. NCBI_GenBank
Match: XP_001032158.1 (divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210] >EAR84495.1 divergent CRAL/TRIO domain protein (macronuclear) [Tetrahymena thermophila SB210]) HSP 1 Score: 124.4 bits (311), Expect = 5.700e-25 Identity = 67/219 (30.59%), Postives = 118/219 (53.88%), Query Frame = 0 Query: 57 FAEMQAKIVE-----LASED--NVSPYNEEDMLNRVLVARNLHVAEAFHMWQNIVAWRKQYQPEFLSEEEAAPYLKLGVISTCGPDVNGRPCIYALNRNHLIDAEHHDRNLRTIVNVLEKTTVESSKIADGFIAVIIDQEGVGRKNMDTHLFIGKPGLVQVLQEYYPERLGSCYIIHTSWIFRLMWAIISPFLDDKTRKKVHVLPHTEDLLQYFSLDRL 269 F E++ KI++ L +D Y E++ R+L A++ HV +AF MWQ ++WR + + + EE+ A + G G D PC+ +NH I D ++ ++ ++E+ +S + G I++I D+EG KN+D LF L Q++Q+ Y ER+ YI++ +W F+ ++A++ PFL ++T++KV + ED+ YF L Sbjct: 31 FKELKQKIIDEAHTLLCPKDVTKFERYTEDNQAVRLLWAQDFHVEKAFAMWQKWISWRLKIGADDIKEEDIAQEYQRGRAFWHGKDKQNNPCLVVKVKNH-IPGVSSDIMVKYVLFLIEEAIQKSEEAGTGMISIIWDREGFSIKNVDYKLFETFKSLNQIIQDNYAERIQKVYILYPNWFFKTIYALVKPFLTERTKQKVLFVDQIEDMTTYFEPSEL 248
BLAST of NO09G00480 vs. NCBI_GenBank
Match: XP_001032416.1 (divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210] >EAR84753.1 divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210]) HSP 1 Score: 123.2 bits (308), Expect = 1.300e-24 Identity = 64/217 (29.49%), Postives = 113/217 (52.07%), Query Frame = 0 Query: 56 VFAEMQAKIVELASEDNVSPYNEEDMLNRVLVARNLHVAEAFHMWQNIVAWRKQYQPEFLSEEEAAPYLKLG-VISTCGPDVNGRPCIYALNRNHLIDAEHHDRNLRTIVNVLEKTTVESSKIADGFIAVIIDQEGVGRKNMDTHLFIGKPGLVQVLQEYYPERLGSCYIIHTSWIFRLMWAIISPFLDDKTRKKVHVLPHTEDLLQYFSLDRLPAD 272 V A+ Q SE+N Y ++ + R+L+AR+ ++ MW+N V WR+Q +PE + E++ LK G T G D+ P + A+ R H+ A + + ++ LE ++ + G + + D G KN T L+ +LQ+ YPE LG + +W+F+ ++AI+ PFL +T++K+ +L E++L+Y S + L A+ Sbjct: 28 VEAQSQTTFTAQMSEENKKFYLNQNEIIRILLARDFDPKKSLEMWKNWVQWREQNKPETIKEQDIVEELKAGKAFLTGGYDIQKNPILVAVFRRHIPGAIPRETTEKFFIHYLEDALKKARQTGSGRVTIFADMVGYSNKNFSTKDSDLIKKLLSILQDNYPESLGKLIVFKPTWLFKFVYAIVKPFLSKRTKEKIVLLKKEEEILKYISKEELLAE 244
BLAST of NO09G00480 vs. NCBI_GenBank
Match: XP_001437007.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK69610.1 unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 120.9 bits (302), Expect = 6.300e-24 Identity = 60/204 (29.41%), Postives = 111/204 (54.41%), Query Frame = 0 Query: 60 MQAKIVELASEDNVSPYNEEDMLNRVLVARNLHVAEAFHMWQNIVAWRKQYQPEFLSEEEAAPYLKLGVISTCGPDVNGRPCIYALNRNHLIDAEHHDRNLRTIVNVLEKTTVESSKIADGFIAVIIDQEGVGRKNMDTHLFIGKPGLVQVLQEYYPERLGSCYIIHTSWIFRLMWAIISPFLDDKTRKKVHVLPHTEDLLQYF 264 ++ ++ +L ED V Y+ ED L R+L+AR V ++F W+ V WRKQY+ + + EE + L G D G PC+ + H + + +R + ++++ ++ + G I+VI D+EGV KN D+ +F +V ++Q+ Y ERL +I++ +++ + + ++ PFL +KT+ K+ + +DL YF Sbjct: 25 VKVEVPKLVREDLVQKYSNEDHLIRLLIAREWKVNDSFDQWKRWVEWRKQYRADDIKIEEIQQEINLNKAFWNGSDKLGNPCLVVKAKRHFPGQSNPETLIRFFLYMIDQGIQKADQAGTGKISVIWDREGVTSKNFDSSMFTIMKKMVTLVQDNYAERLHQLFILYPNFLVKSIMTVVRPFLSEKTKSKIALCNEIKDLKVYF 228
BLAST of NO09G00480 vs. NCBI_GenBank
Match: XP_001432825.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK65428.1 unnamed protein product (macronuclear) [Paramecium tetraurelia]) HSP 1 Score: 118.6 bits (296), Expect = 3.100e-23 Identity = 64/214 (29.91%), Postives = 114/214 (53.27%), Query Frame = 0 Query: 53 HPDVFAEMQAKIVE----LASEDNVSPYNEEDMLNRVLVARNLHVAEAFHMWQNIVAWRKQYQPEFLSEEEAAPYLKLGVISTCGPDVNGRPCIYALNRNHLIDAEHHDRNLRTIVNVLEKTTVESSKIADGFIAVIIDQEGVGRKNMDTHLFIGKPGLVQVLQEYYPERLGSCYIIHTSWIFRLMWAIISPFLDDKTRKKVHVLPHTEDLLQY 263 H + ++Q KI E L SE+ + Y+ ED L R+L+AR + +AF W+ V WRKQY+ + + EE + L G D G PC+ + H + + +R + ++++ ++ G I+VI D+EGV KN D+ +F +V ++Q+ Y ERL +I++ +++ + + I+ PFL++KT+ K+ + +DL Y Sbjct: 7 HTERLKQLQIKIQEEIRNLVSENLIQKYSNEDHLVRLLIAREWKINDAFEQWKRWVEWRKQYRADEIKIEEIQKEIDLRKAFWNGVDKLGNPCLIIKAKRHFPGESNPETLIRFFLYMIDQGIQQADMTGTGRISVIWDREGVAFKNFDSSMFTIMKKIVTLVQDNYAERLHQLFILYPNFLVKSVMNIVRPFLNEKTKSKIILCNQMKDLQYY 220
BLAST of NO09G00480 vs. NCBI_GenBank
Match: XP_012653198.1 (divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210] >EWS74225.1 divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210]) HSP 1 Score: 117.1 bits (292), Expect = 9.100e-23 Identity = 67/221 (30.32%), Postives = 115/221 (52.04%), Query Frame = 0 Query: 58 AEMQAKIVELASE--DNVSP-----YNEEDMLNRVLVARNLHVAEAFHMWQNIVAWRKQYQPEFLSEEEAA--PYLKLGVISTCGPDVNGRPCIYALNRNHLIDAEHHDRNLRTIVNVLEKTTVESSKI-ADGFIAVIIDQEGVGRKNMDTHLFIGKPGLVQVLQEYYPERLGSCYIIHTSWIFRLMWAIISPFLDDKTRKKVHVLPHTEDLLQYFSLDRL 269 AE Q KI + ++ N+S Y+ D R + AR ++F MW+ W ++Y+P+ +S++E+ L G + D RPC+Y + H+ + ++R + +LE+ E K+ ++G I VI D+ G +K D + LV +LQ+YYPERL Y++ +W +R + +++ F+ +KT KKV VL +LLQ+F+ L Sbjct: 23 AEFQKKIEKQINQTHPNISQELKELYSSVDTAIRFMNAREFSEQKSFEMWEKXXXWHQEYRPDLISDKESTIQKQLSTGKLFWHKFDNERRPCLYYRMKYHVPKLASVEESVRFFLFMLEQGIKEGIKLGSEGTICVIYDRRGYTKKQYDENAMKTMRALVPILQDYYPERLSMFYVLGANWFYRAAFKVVATFMSEKTSKKVKVLGEDSELLQFFNKQNL 243 The following BLAST results are available for this feature:
BLAST of NO09G00480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G00480 ID=NO09G00480|Name=NO09G00480|organism=Nannochloropsis oceanica|type=gene|length=858bpback to top protein sequence of NO09G00480.1 >NO09G00480.1-protein ID=NO09G00480.1-protein|Name=NO09G00480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=286bpback to top Synonyms
Publications
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