NO09G00460, NO09G00460 (gene) Nannochloropsis oceanica

Overview
NameNO09G00460
Unique NameNO09G00460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1804
Alignment locationchr9:196449..198252 -

Link to JBrowse

Properties
Property NameValue
DescriptionCoatomer protein complex,delta sub-unit
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:196449..198252 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006890retrograde vesicle-mediated transport, Golgi to ER
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0030126COPI vesicle coat
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR036168AP2_Mu_C_sf
IPR011012Longin-like_dom
IPR027059Coatomer_dsu
IPR022775AP_mu_sigma_su
IPR028565MHD
Homology
BLAST of NO09G00460 vs. NCBI_GenBank
Match: CBJ25720.1 (Coatomer protein complex,delta sub-unit [Ectocarpus siliculosus])

HSP 1 Score: 506.9 bits (1304), Expect = 7.900e-140
Identity = 321/556 (57.73%), Postives = 401/556 (72.12%), Query Frame = 0
Query:    2 VVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEEKQHTFIETETVRYVYQPIENLFLLLITNKASNIVEDLETLRLLSKIVPEVAGGVSEERVIDKCFELVFAFDEVLTTGGYRESVSLQQIKTNMEMDSHEEKLALMIKQSKMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGVGGFXXXXXXXXXXSTGVSSSSYMPGTVDSNSASILETAPTKIASKGMKLGAPSKASTMLDSLVQEDNLSHIATTTAIAPTSTRGGAGG-EAAVPAPVI--QHQPIQLVVEEKIIAHLTRDGAVDAFEVKGSLTLTATTEAAARSKVVLGEGAGGGIVPVGLNFQTHPKVNKQEYDSSKVLVLKDTNKGFPVGRPVGVLRWSYSSTDESMVPLTLNCWPEEEGQGKMNISIEYQMNGQNRELHDVNISIPLGTAEPPQVAAVDGTFRHDPREQRLVWHMDLVDSSNASGALEFVVAGRDAGAFFPIIVSFASQMLYADVAVSAVTGLENAAPVPYSLSKSLTPDSYIV 555
            VVLS +I T+NGKALL+RQFV+MSRIRIEGLLAAFPKL+G+G  KQHTFIETETVRYVYQPIENLFLLL+TNKASNIVEDLETLR+LSK+VP+VAGGV+E++V+ K FELVFAFDEV+TTGG++E+++LQQIKTNMEMDSHEE+L  MI+ SK +                         XXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXX         +     +  AS    A T+++++GMKLG  SK+  MLDSL++ED+L  I       P++++  AGG EAAVPA V+     P+ L VEE++   LTR+G +++ EVKG+L+LTA ++ A + KVVL      G       FQTHPKVNK  YDS+K L  KD  KGFPV RPVGVLRWS ++TDES +PLT+NCWPE EG G+MN+S+EY++  +  ELHDV ISIPLG++  P++AA+DG+ RH  +E  L+W MDL+D SN +G+LEF +A RDA AFFPI V+FAS  L+ DV V+ VT  E  +P+ Y  + SLT DSY V
Sbjct:   16 VVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTG-NKQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGVTEDKVMSKSFELVFAFDEVITTGGHKENITLQQIKTNMEMDSHEERLHTMIQDSKREAAKEEADRRAKELREKAKEAQLRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGL-SVPAAGPASSTPVADTRVSTQGMKLGGASKSKNMLDSLIKEDHLVSI-------PSASKASAGGTEAAVPAAVVAASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGT----FTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEPEGGGQMNVSMEYEL-VRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLTQEGTLLWTMDLLDQSNRTGSLEFNIASRDAEAFFPITVTFASNQLFCDVQVAGVTNTETESPIQYGYTASLTADSYTV 557          
BLAST of NO09G00460 vs. NCBI_GenBank
Match: XP_009039377.1 (hypothetical protein AURANDRAFT_38260 [Aureococcus anophagefferens] >EGB05833.1 hypothetical protein AURANDRAFT_38260 [Aureococcus anophagefferens])

HSP 1 Score: 447.6 bits (1150), Expect = 5.700e-122
Identity = 258/552 (46.74%), Postives = 352/552 (63.77%), Query Frame = 0
Query:    1 MVVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEEKQHTFIETETVRYVYQPIENLFLLLITNKASNIVEDLETLRLLSKIVPEVAGGVSEERVIDKCFELVFAFDEVLTTGGYRESVSLQQIKTNMEMDSHEEKLALMIKQSKMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGVGGFXXXXXXXXXXSTGVSSSSYMPGTVDSNSASILETAPTKIASKGMKLGAPSKASTMLDSLVQEDNLSHIATTTAIAPTSTRGGAGGEAAVPAPVIQHQPIQLVVEEKIIAHLTRDGAVDAFEVKGSLTLTATTEAAARSKVVLGEGAGGGIVPVGLNFQTHPKVNKQEYDSSKVLVLKDTNKGFPVGRPVGVLRWSYSSTDESMVPLTLNCWPEEEGQGKMNISIEYQMNGQNRELHDVNISIPLGTAEPPQVAAVDGTFRHDPREQRLVWHMDLVDSSNASGALEFVVAGRDAGAFFPIIVSFASQMLYADVAVSAVTGLENAAPVPYSLSKSLTPDSY 553
            MVVLS ++CTKNG+ L +RQFVEM+R+R+EGLLAAFPKL+G+G  KQHTFIET++VRYV+QP+E+++LLLITNKASNIVEDLETLRLLSK+VPE+AGG SEE++ DK F+LVFAFDEV+TTGGYRE++ L+QI+TN+EMDSHEEKL  M+K++KMD                                                   D   G XXXXXXXX            P       A      P  +  K MKLG     S+++D +  ED +S      A A T ++                    L+VEEK+   L+++GA+++F++KG+L+LTA  E AA  KV + + A       G  FQ HPKV+K+++++   +++KD +KGFPVGRPVGV+RWS S+TDE++VPLT+NCWPE+EG G MN+++EY++  +  EL+DV I IP G    P++ +VDG+  HD +E+ L W +D+VD SN  G LEF +  RDA  FFPI V+F S+ LY D  +++VT ++  APV YSL+K+LT DS+
Sbjct:    1 MVVLSASVCTKNGRCLFARQFVEMNRLRVEGLLAAFPKLMGTG-NKQHTFIETDSVRYVWQPVESIYLLLITNKASNIVEDLETLRLLSKVVPEIAGGHSEEKLSDKAFDLVFAFDEVITTGGYREAIDLRQIRTNLEMDSHEEKLHNMVKKTKMDSAKDQAAHMSKVIKSRQREASKSG---------------------------DDPYGXXXXXXXXXMGMPAPPMGGESPYXXXXXXAPAPPPEPV-VQVKSMKLGGKKNKSSLMDKMAAEDGIS-----IAPAFTPSKPXXXXXXXXXXXXXXXXXXSLIVEEKLTVALSQEGALESFDLKGTLSLTANDEGAALCKVQIADKAAA----PGTTFQVHPKVSKKDWEADGAVMMKDASKGFPVGRPVGVVRWSLSTTDEALVPLTINCWPEDEGDGVMNVNVEYELK-RPMELYDVVIRIP-GCGNAPEIVSVDGSHTHDAKEEVLDWKLDMVDGSNKQGTLEFNINARDADDFFPIAVTFRSKSLYYDAPIASVTAIDGDAPVAYSLNKALTVDSF 512          
BLAST of NO09G00460 vs. NCBI_GenBank
Match: OQR95583.1 (coatomer subunit delta [Thraustotheca clavata])

HSP 1 Score: 418.7 bits (1075), Expect = 2.800e-113
Identity = 240/559 (42.93%), Postives = 334/559 (59.75%), Query Frame = 0
Query:    1 MVVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEEKQHTFIETETVRYVYQPIENLFLLLITNKASNIVEDLETLRLLSKIVPEVAGGVSEERVIDKCFELVFAFDEVLTTGGYRESVSLQQIKTNMEMDSHEEKLALMIKQSKMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGVGGFXXXXXXXXXXSTGVSSSSYMPGTVDSNSASILETAPTKIAS-----KGMKLGAPSKASTMLDSLVQEDNLSHIATTTAIAPTSTRGGAGGEAAVPAPVIQHQPIQLVVEEKIIAHLTRDGAVDAFEVKGSLTLTATTEAAARSKVVLGEGAGGGIVPVGLNFQTHPKVNKQEYDSSKVLVLKDTNKGFPVGRPVGVLRWSYSSTDESMVPLTLNCWPEEEGQGKMNISIEYQMNGQNRELHDVNISIPLGTAEPPQVAAVDGTFRHDPREQRLVWHMDLVDSSNASGALEFVVAGRDAGAFFPIIVSFASQMLYADVAVSAVTGLENAAPVPYSLSKSLTPDSYIV 555
            MVVLS A+  KNGK +++RQFVE+SRIR+EGLL AFPKLL S E +QHTFI+TE+VRYVYQPIE+ FLLLITNK SNIVEDL T++L++K+VP++ G ++E  + +K F+LVF FDE+LT GG+ E+++LQQI+TNMEM+SHEEKL LMI+++K +                                                      GGF          S+G +S S         +A     AP + +S      GMKLG     ++ LD++  ED+L  I      A       A  E   PA  + H+P+ + +EEK+   L RDGAV+  EVKGSL +      ++  ++ L      GI     NFQTHPKV+K+ ++S  +L LKD +K FP  R V VLRW+  + DES +PL + CWPEEEG GKM +S+EY M+ +   L +VNI IPLG  + PQ++ +DG +RH+P E  L+WH+D +DSSN+SG+LEF + G +  AFFPI VSF S+ +Y D+AV +V    + +PV Y   + ++ DSY++
Sbjct:  312 MVVLSAALLAKNGKVMVARQFVEVSRIRLEGLLTAFPKLLAS-ESRQHTFIDTESVRYVYQPIESYFLLLITNKTSNIVEDLHTMQLMAKLVPDICGTLTEAHIREKQFDLVFGFDELLTAGGHSENITLQQIRTNMEMESHEEKLHLMIQKTKQE---------------NAIADMKRQQQRIKEEQREKARMEKAAGMTSPFNRNSSYGGF-------GSNSSGFTSPSAXXXXNSFKAAEPYIEAPKQSSSSSSRTSGMKLGGSKPGNSFLDAMAAEDDLKDIPPMAMAAANIPAPTAKPE---PAAAVSHEPVGIAIEEKLSVVLNRDGAVEQLEVKGSLFVAGNDPESSVCRLRLRHSNANGI-----NFQTHPKVDKKLFESQSILALKDDSKPFPPSR-VAVLRWAIKTQDESFLPLNITCWPEEEGNGKMTVSLEYSMD-REMNLENVNIIIPLGANDLPQISHIDGDYRHNPSEGSLLWHLDTIDSSNSSGSLEFSIRGNNLDAFFPIGVSFFSRSIYCDLAVDSVIRTSDGSPVKYGFDQLVSTDSYVI 837          
BLAST of NO09G00460 vs. NCBI_GenBank
Match: XP_002901900.1 (coatomer subunit delta, putative [Phytophthora infestans T30-4] >EEY57290.1 coatomer subunit delta, putative [Phytophthora infestans T30-4])

HSP 1 Score: 406.8 bits (1044), Expect = 1.100e-109
Identity = 238/564 (42.20%), Postives = 331/564 (58.69%), Query Frame = 0
Query:    1 MVVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEEKQHTFIETETVRYVYQPIENLFLLLITNKASNIVEDLETLRLLSKIVPEVAGGVSEERVIDKCFELVFAFDEVLTTGGYRESVSLQQIKTNMEMDSHEEKLALMIKQSKMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGVGGFXXXXXXXXXXS---------TGVSSSSYM--PGTVDSNSASILETAPTKIASKGMKLGAPSKASTMLDSLVQEDNLSHI-ATTTAIAPTSTRGGAGGEAAVPAPVIQHQPIQLVVEEKIIAHLTRDGAVDAFEVKGSLTLTATTEAAARSKVVLGEGAGGGIVPVGLNFQTHPKVNKQEYDSSKVLVLKDTNKGFPVGRPVGVLRWSYSSTDESMVPLTLNCWPEEEGQGKMNISIEYQMNGQNRELHDVNISIPLGTAEPPQVAAVDGTFRHDPREQRLVWHMDLVDSSNASGALEFVVAGRDAGAFFPIIVSFASQMLYADVAVSAVTGLENAAPVPYSLSKSLTPDSY 553
            MVVLS A+ T+NGK L++RQFVE++RIR+EGLLAAFPKLL SG  ++HTFI+TE+VRYVYQP+E+ F+L+ITNK SNIVEDL T+++L+K+VP++   +SE  + DK FELVF FDE++T GG+ E++++ QI+ NMEM+SHEEKL  MI +SK                                                    R G+GG           S         +G SS S+M  P +  + S +   T P  + SK   +G      + +D++  ED L  I   + A+ P         +    A  + H PI  VVEEK+   LTRDGA++  EVKGS+ ++    +A   ++ L  G   GI     +FQTHPKV+K+ YDS  VL L+D  K FP  R V  LRWS  + DESM+PL + CWPEEEG GKMN+S+EY ++ ++  L +VN+ IPLG ++ P VA VDG ++H+  E  L+WH D + S+N SG LEF + G +  AFFPI VSF S+ +Y+DV V AV  +E+ +P+ +   K L+ DSY
Sbjct:    1 MVVLSAALLTRNGKVLVARQFVEITRIRLEGLLAAFPKLLSSG-SREHTFIDTESVRYVYQPLESFFVLIITNKTSNIVEDLHTIQVLAKLVPDICAPLSETSIRDKQFELVFGFDELITAGGHSENINVSQIRVNMEMESHEEKLHNMILESK--------------------------RAAAKDDMKRHTARIKEEQRERARLERSGLGGSGFGSQNSFGSSFSNAFKSPRSGGSSDSFMNSPRSPPATSPTSYNTRPEPVVSKAAGMGLGGGGKSFMDAMAAEDGLKEIPPMSAAVEPV--------QKPEVAAAVSHDPIGAVVEEKMTVVLTRDGALEQLEVKGSMYVSVNDPSAGCCRLKLRTGGAEGI-----SFQTHPKVDKRLYDSESVLALRDPTKPFPTSR-VAFLRWSLKTQDESMLPLNITCWPEEEGNGKMNVSVEYSLD-RDMMLDNVNVVIPLGGSDAPSVANVDGQYQHNSAEGVLLWHQDQISSANNSGTLEFSIRGNNMDAFFPISVSFFSRSVYSDVQVEAVQKVEDGSPIAFGFEKLLSTDSY 522          
BLAST of NO09G00460 vs. NCBI_GenBank
Match: XP_008863457.1 (hypothetical protein H310_01900 [Aphanomyces invadans] >ETW07364.1 hypothetical protein H310_01900 [Aphanomyces invadans])

HSP 1 Score: 402.1 bits (1032), Expect = 2.700e-108
Identity = 254/555 (45.77%), Postives = 353/555 (63.60%), Query Frame = 0
Query:    1 MVVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEEKQHTFIETETVRYVYQPIENLFLLLITNKASNIVEDLETLRLLSKIVPEVAGGVSEERVIDKCFELVFAFDEVLTTGGYRESVSLQQIKTNMEMDSHEEKLALMIKQSKMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGVGGFXXXXXXXXXXSTGVSSSSYMPGTVDSNSASILETAPTKIASKGMKLGAPS-KASTMLDSLVQEDNLSHIATTTAIAPTSTRGGAGGEAAVPAPVIQHQPIQLVVEEKIIAHLTRDGAVDAFEVKGSLTLTATTEAAARSKVVLGEGAGGGIVPVGLNFQTHPKVNKQEYDSSKVLVLKDTNKGFPVGRPVGVLRWSYSSTDESMVPLTLNCWPEEEGQGKMNISIEYQMNGQNRELHDVNISIPLGTAEPPQVAAVDGTFRHDPREQRLVWHMDLVDSSNASGALEFVVAGRDAGAFFPIIVSFASQMLYADVAVSAVTGLENAAPVPYSLSKSLTPDSYIV 555
            MVVLS A+ +KNGK +++RQFVE+SRIR+EGLL AFPKLL S E +QHTFI+TE+VRYVYQPIE+ FLLLITNK SNIVEDL T++L++K+VP++ G ++E  + +K F+LVF FDE+LT GG+ E ++LQQI+TN+EM+SHEEKL LMI+++K++                  XXXXXXXXXXXXXXXXXXXXXXXXXXX           F              +   Y P  V S+S     +  T  AS GMKLG  S K S+ LD++  ED+L  I    + A +     A  E  +P   +   P+ L +EEK+   L RDGAV+  EVKGSL +      ++  ++ L      G+     NFQTHPKV+K+ +++  +L LKD  K FP  R V VLRW+  + DES +PL + CWPEEE  GKM +S+EY M+ ++  L +V I +P G  +PP ++ +DG +RH+P +  ++W +  + SSN++G+LEF + G++  A+FPI VSF S+  Y D+AV  V    + +PV Y   + L+ +SY+V
Sbjct:    1 MVVLSAALLSKNGKVMVARQFVEVSRIRLEGLLTAFPKLLAS-ETRQHTFIDTESVRYVYQPIESFFLLLITNKTSNIVEDLHTMQLMAKLVPDICGPLTEAHIREKQFDLVFGFDELLTAGGHAEQINLQQIRTNLEMESHEEKLHLMIQKTKLENATADRKRQEARIKEEQRXXXXXXXXXXXXXXXXXXXXXXXXXXXPTASSYSSQSSFG-----------SSAPKEYTPEPVKSSS-----SLATSKASSGMKLGGGSKKGSSFLDAMAAEDDLKDIPPVVSAAASI---AAPSETKLPEVAVSSDPVSLAIEEKVSVQLNRDGAVEQLEVKGSLFVAGNDPESSACRLHLQHSTANGV-----NFQTHPKVDKKLFEAQSILALKDDTKPFPASR-VAVLRWAIKTQDESFLPLNITCWPEEEANGKMTVSLEYSMD-RDMVLENVVIQVPTGVVDPPHISQIDGEYRHNPTDNVVLWRIPSISSSNSTGSLEFTIRGQNLDAYFPIQVSFYSRTTYCDLAVQHVLKTADQSPVQYGFDQLLSTESYVV 528          
BLAST of NO09G00460 vs. NCBI_GenBank
Match: XP_008891528.1 (hypothetical protein PPTG_02241 [Phytophthora parasitica INRA-310] >ETN22252.1 hypothetical protein PPTG_02241 [Phytophthora parasitica INRA-310])

HSP 1 Score: 401.7 bits (1031), Expect = 3.600e-108
Identity = 245/574 (42.68%), Postives = 333/574 (58.01%), Query Frame = 0
Query:    1 MVVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEEKQHTFIETETVRYVYQPIENLFLLLITNKASNIVEDLETLRLLSKIVPEVAGGVSEERVIDKCFELVFAFDEVLTTGGYRESVSLQQIKTNMEMDSHEEKLALMIKQSKMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGVGGFXXXXXXXXXXS---------TGVSSSSYMPGTVDSNSASIL--ETAPTKIASK--GMKLGA---------PSKASTMLDSLVQEDNLSHIATTTAIAPTSTRGGAGGEAAVPAPVIQHQPIQLVVEEKIIAHLTRDGAVDAFEVKGSLTLTATTEAAARSKVVLGEGAGGGIVPVGLNFQTHPKVNKQEYDSSKVLVLKDTNKGFPVGRPVGVLRWSYSSTDESMVPLTLNCWPEEEGQGKMNISIEYQMNGQNRELHDVNISIPLGTAEPPQVAAVDGTFRHDPREQRLVWHMDLVDSSNASGALEFVVAGRDAGAFFPIIVSFASQMLYADVAVSAVTGLENAAPVPYSLSKSLTPDSY 553
            MVVLS A+ TKNGK L++RQFVE++RIR+EGLLAAFPKLL SG  ++HTFI+TE+VRYVYQP+E+ F+L+ITNK SNIVEDL T+++LSK+VP++   +SE  + DK FELVF FDE++T GG+ E++++ QI+ NMEM+SHEEKL  MI +SK                                                    R G+GG           S         +G SS S+M       + S +   + P  + SK  GMKLG+              + +D++  ED L  I   +A   T  +     E AV    + H PI  VVEEKI   LTRDGA++  EVKGS+ ++    +A    + L  G   GI     +FQTHPKV+K+ YDS  VL L+D  K FP  R V  LRWS  + DESM+PL + CWPEEEG GKMN+S+EY ++ ++  L +VN+ IPLG ++ P VA VDG ++H+  E  L+WH D + S+N SG LEF + G +  AFFPI VSF S+ +Y+DV V AV  +E+ +P+ +   K L+ DSY
Sbjct:    1 MVVLSAALLTKNGKVLVARQFVEITRIRLEGLLAAFPKLLSSG-SREHTFIDTESVRYVYQPLESFFVLIITNKTSNIVEDLHTIQVLSKLVPDICAPLSEASIRDKQFELVFGFDELITAGGHSENINVSQIRVNMEMESHEEKLHNMILESK--------------------------RAAAKDDMKRHTARIKEEQRERARLERAGMGGSGFGSQNSFGSSFSNAFKSPRSGGSSDSFMXXXXXXAATSPISYNSRPEPVVSKAAGMKLGSXXXXXXXXXXXXXXSFMDAMAAEDGLKEIPPMSAAVETVQK----PEVAV---AVSHDPIGAVVEEKITVVLTRDGALEQLEVKGSMYVSVNDPSAGCCHLKLRTGGVEGI-----SFQTHPKVDKKLYDSDSVLALRDPTKPFPTSR-VAFLRWSLKTQDESMLPLNITCWPEEEGNGKMNVSVEYSLD-RDMVLDNVNVVIPLGGSDAPSVANVDGQYQHNSAEGSLLWHQDQISSANNSGTLEFSIRGNNMDAFFPISVSFFSRSVYSDVQVEAVQKIEDGSPIAFGFEKLLSTDSY 533          
BLAST of NO09G00460 vs. NCBI_GenBank
Match: ETI50318.1 (hypothetical protein F443_06102 [Phytophthora parasitica P1569] >ETK90213.1 hypothetical protein L915_05980 [Phytophthora parasitica] >ETL96797.1 hypothetical protein L917_05804 [Phytophthora parasitica] >ETM49950.1 hypothetical protein L914_05925 [Phytophthora parasitica] >ETO79001.1 hypothetical protein F444_06162 [Phytophthora parasitica P1976] >ETP20084.1 hypothetical protein F441_06110 [Phytophthora parasitica CJ01A1] >ETP48048.1 hypothetical protein F442_06139 [Phytophthora parasitica P10297])

HSP 1 Score: 401.0 bits (1029), Expect = 6.100e-108
Identity = 243/574 (42.33%), Postives = 334/574 (58.19%), Query Frame = 0
Query:    1 MVVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEEKQHTFIETETVRYVYQPIENLFLLLITNKASNIVEDLETLRLLSKIVPEVAGGVSEERVIDKCFELVFAFDEVLTTGGYRESVSLQQIKTNMEMDSHEEKLALMIKQSKMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGVGGFXXXXXXXXXXS---------TGVSSSSYM--PGTVDSNSASILETAPTKIASK--GMKLGA---------PSKASTMLDSLVQEDNLSHIATTTAIAPTSTRGGAGGEAAVPAPVIQHQPIQLVVEEKIIAHLTRDGAVDAFEVKGSLTLTATTEAAARSKVVLGEGAGGGIVPVGLNFQTHPKVNKQEYDSSKVLVLKDTNKGFPVGRPVGVLRWSYSSTDESMVPLTLNCWPEEEGQGKMNISIEYQMNGQNRELHDVNISIPLGTAEPPQVAAVDGTFRHDPREQRLVWHMDLVDSSNASGALEFVVAGRDAGAFFPIIVSFASQMLYADVAVSAVTGLENAAPVPYSLSKSLTPDSY 553
            MVVLS A+ T+NGK L++RQFVE++RIR+EGLLAAFPKLL SG  ++HTFI+TE+VRYVYQP+E+ F+L+ITNK SNIVEDL T+++LSK+VP++   +SE  + DK FELVF FDE++T GG+ E++++ QI+ NMEM+SHEEKL  MI +SK                                                    R G+GG           S         +G SS S+M       + S +   + P  + SK  GMKLG+              + +D++  ED L  I   +A   T  +     E AV    + H PI  VVEEK+   LTRDGA++  EVKGS+ ++    +A   ++ L  G   GI     +FQTHPKV+K+ YDS  VL L+D  K FP  R V  LRWS  + DESM+PL + CWPEEEG GKMN+S+EY ++ ++  L +VN+ IPLG ++ P VA VDG ++H+  E  L+WH D + S+N SG LEF + G +  AFFPI VSF S+ +Y+DV V AV  +E+ +P+ +   K L+ DSY
Sbjct:    1 MVVLSAALLTRNGKVLVARQFVEITRIRLEGLLAAFPKLLSSG-SREHTFIDTESVRYVYQPLESFFVLIITNKTSNIVEDLHTIQVLSKLVPDICAPLSEASIRDKQFELVFGFDELITAGGHSENINVSQIRVNMEMESHEEKLHNMILESK--------------------------RAAAKDDMKRHTARIKEEQRERARLERAGMGGSGFGSQNSFGSSFSNAFKSPRSGGSSDSFMNXXXXXAATSPTSYNSRPEPVVSKAAGMKLGSSXXXXXXXXXXXXKSFMDAMAAEDGLKEIPPMSAAVETVQK----PEVAV---AVSHDPIGAVVEEKMTVVLTRDGALEQLEVKGSMYVSVNDPSAGCCRLKLRTGGVEGI-----SFQTHPKVDKKLYDSDSVLALRDPTKPFPTSR-VAFLRWSLKTQDESMLPLNITCWPEEEGNGKMNVSVEYSLD-RDMVLDNVNVVIPLGGSDAPSVANVDGQYQHNSAEGSLLWHQDQISSANNSGTLEFSIRGNNMDAFFPISVSFFSRSVYSDVQVEAVQKIEDGSPIAFGFEKLLSTDSY 533          
BLAST of NO09G00460 vs. NCBI_GenBank
Match: ETL43621.1 (hypothetical protein L916_05915 [Phytophthora parasitica])

HSP 1 Score: 400.2 bits (1027), Expect = 1.000e-107
Identity = 243/574 (42.33%), Postives = 333/574 (58.01%), Query Frame = 0
Query:    1 MVVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEEKQHTFIETETVRYVYQPIENLFLLLITNKASNIVEDLETLRLLSKIVPEVAGGVSEERVIDKCFELVFAFDEVLTTGGYRESVSLQQIKTNMEMDSHEEKLALMIKQSKMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGVGGFXXXXXXXXXXS---------TGVSSSSYM--PGTVDSNSASILETAPTKIASK--GMKLGA---------PSKASTMLDSLVQEDNLSHIATTTAIAPTSTRGGAGGEAAVPAPVIQHQPIQLVVEEKIIAHLTRDGAVDAFEVKGSLTLTATTEAAARSKVVLGEGAGGGIVPVGLNFQTHPKVNKQEYDSSKVLVLKDTNKGFPVGRPVGVLRWSYSSTDESMVPLTLNCWPEEEGQGKMNISIEYQMNGQNRELHDVNISIPLGTAEPPQVAAVDGTFRHDPREQRLVWHMDLVDSSNASGALEFVVAGRDAGAFFPIIVSFASQMLYADVAVSAVTGLENAAPVPYSLSKSLTPDSY 553
            MVVLS A+ T+NGK L++RQFVE++RIR+EGLLAAFPKLL SG  ++HTFI+TE+VRYVYQP+E+ F+L+ITNK SNIVEDL T+++LSK+VP++   +SE  + DK FELVF FDE++T GG+ E++ + QI+ NMEM+SHEEKL  MI +SK                                                    R G+GG           S         +G SS S+M       + S +   + P  + SK  GMKLG+              + +D++  ED L  I   +A   T  +     E AV    + H PI  VVEEK+   LTRDGA++  EVKGS+ ++    +A   ++ L  G   GI     +FQTHPKV+K+ YDS  VL L+D  K FP  R V  LRWS  + DESM+PL + CWPEEEG GKMN+S+EY ++ ++  L +VN+ IPLG ++ P VA VDG ++H+  E  L+WH D + S+N SG LEF + G +  AFFPI VSF S+ +Y+DV V AV  +E+ +P+ +   K L+ DSY
Sbjct:    1 MVVLSAALLTRNGKVLVARQFVEITRIRLEGLLAAFPKLLSSG-SREHTFIDTESVRYVYQPLESFFVLIITNKTSNIVEDLHTIQVLSKLVPDICAPLSEASIRDKQFELVFGFDELITAGGHSENIHVSQIRVNMEMESHEEKLHNMILESK--------------------------RAAAKDDMKRHTARIKEEQRERARLERAGMGGSGFGSQNSFGSSFSNAFKSPRSGGSSDSFMNXXXXXAATSPTSYNSRPEPVVSKAAGMKLGSSXXXXXXXXXXXXKSFMDAMAAEDGLKEIPPMSAAVETVQK----PEVAV---AVSHDPIGAVVEEKMTVVLTRDGALEQLEVKGSMYVSVNDPSAGCCRLKLRTGGVEGI-----SFQTHPKVDKKLYDSDSVLALRDPTKPFPTSR-VAFLRWSLKTQDESMLPLNITCWPEEEGNGKMNVSVEYSLD-RDMVLDNVNVVIPLGGSDAPSVANVDGQYQHNSAEGSLLWHQDQISSANNSGTLEFSIRGNNMDAFFPISVSFFSRSVYSDVQVEAVQKIEDGSPIAFGFEKLLSTDSY 533          
BLAST of NO09G00460 vs. NCBI_GenBank
Match: XP_009825645.1 (hypothetical protein H257_03332 [Aphanomyces astaci] >ETV83953.1 hypothetical protein H257_03332 [Aphanomyces astaci])

HSP 1 Score: 394.8 bits (1013), Expect = 4.400e-106
Identity = 258/556 (46.40%), Postives = 350/556 (62.95%), Query Frame = 0
Query:    1 MVVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEEKQHTFIETETVRYVYQPIENLFLLLITNKASNIVEDLETLRLLSKIVPEVAGGVSEERVIDKCFELVFAFDEVLTTGGYRESVSLQQIKTNMEMDSHEEKLALMIKQSKMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGVGGFXXXXXXXXXXSTGVSS-SSYMPGTVDSNSASILETAPTKIASKGMKLGAPSK-ASTMLDSLVQEDNLSHIATTTAIAPTSTRGGAGGEAAVPAPVIQHQPIQLVVEEKIIAHLTRDGAVDAFEVKGSLTLTATTEAAARSKVVLGEGAGGGIVPVGLNFQTHPKVNKQEYDSSKVLVLKDTNKGFPVGRPVGVLRWSYSSTDESMVPLTLNCWPEEEGQGKMNISIEYQMNGQNRELHDVNISIPLGTAEPPQVAAVDGTFRHDPREQRLVWHMDLVDSSNASGALEFVVAGRDAGAFFPIIVSFASQMLYADVAVSAVTGLENAAPVPYSLSKSLTPDSYIV 555
            MVVLS A+ +KNGK +++RQFVE+SRIR+EGLL AFPKLL S E +QHTFI+TE+VRYVYQPIE+ FLLLITNK SNIVEDL T++LL+K+VP++ G ++E  + DK F+LVF FDE+LT GG+ E ++LQQI+TN+EM+SHEEKL LMI+++K++                               XXXXXXXXXXXXXXXXXXX       XXXXXXXXXX  G S+   Y P  + + + S+         S GMKLG  SK  S+ LD++  ED+L  I   T+ A          E  +P  V    P+ L +EEK+   L RDGAV+  EVKGSL +      ++  ++ L   +  G+     NFQTHPKV+K+ +++  +L LKD  K FP  R V VLRW+  + DE+ +PL + CWPEEE  GK  +S+EY M+  N  L +V I IP G  +PP V+ +DG +RH+P +  ++W +  + SSN SG+LEF + G +  A+FPI VSF S+  Y D+AV  V    + +PV Y   + L+ +SY+V
Sbjct:    1 MVVLSAALLSKNGKVMVARQFVEVSRIRLEGLLTAFPKLLAS-ETRQHTFIDTESVRYVYQPIESYFLLLITNKTSNIVEDLHTMQLLAKLVPDICGPLTEAHIRDKQFDLVFGFDELLTAGGHAEQINLQQIRTNLEMESHEEKLHLMIQKTKLE----------NATADRKRQEVRIKEEQREKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASTPKEYTPEPLKAPAPSL------SSKSSGMKLGGGSKQGSSFLDAMAAEDDLQDIPPVTSAA-----SSIAAEPKLPDAVGSTDPVSLAIEEKVSVQLNRDGAVEQLEVKGSLFVAGHDPDSSACRLHLRHSSANGV-----NFQTHPKVDKKLFEAQSILALKDDTKPFPPSR-VAVLRWAIKTQDEAFLPLNITCWPEEESNGKTTVSLEYSMDRDNMVLENVVIQIPTGVVDPPHVSQIDGEYRHNPTDHVVLWRIPSISSSNNSGSLEFTIRGTNLDAYFPIQVSFYSRTTYCDLAVDHVLKTSDQSPVQYGFDQLLSTESYVV 528          
BLAST of NO09G00460 vs. NCBI_GenBank
Match: OEU20564.1 (hypothetical protein FRACYDRAFT_223974 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 389.0 bits (998), Expect = 2.400e-104
Identity = 248/559 (44.36%), Postives = 338/559 (60.47%), Query Frame = 0
Query:    1 MVVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEEKQHTFIETETVRYVYQPIE-NLFLLLITNKASNIVEDLETLRLLSKIVPEVAGGVSEERVIDKCFELVFAFDEVLTTGGYRESVSLQQIKTNMEMDSHEEKLALMIKQSKMD--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGVGGFXXXXXXXXXXSTGVSSSSYMPGTVDSNSASILETAPTKIASKGMKLG--APSKASTMLDSLVQEDNLSHIATTTAIAPTSTRGGAGGEAAVPAPVIQHQPIQLVVEEKIIAHLTRDGAVDAFEVKGSLTLTATTEAAARSKVVLGEGAGGGIVPVGLNFQTHPKVNKQEYDSSKVLVLKDTNKGFPVGRPVGVLRWSYSSTDESMVPLTLNCWPEEEGQGKMNISIEYQMNGQNRELHDVNISIPLGTAEPPQVAAVDGTFRHDPREQRLVWHMDLVDSSNASGALEFVVAGRDAGAFFPIIVSFASQMLYADVAVSAVTGLENAAPVPYSLSKSLTPDSYIV 555
            MVVLS ++CT+ GKAL+SRQFVEM+R+R+EGLLAAFPKL+  G  KQHT++ET+ VRYVYQP+E NL+LLLIT KASNIVEDL TLRLL+K+VP+VAGG  E  + +  FEL+FAFDEVLT GGY+E VSL  I+TN+ MDSHEEK+A  +++SK D                                           XXXXXXXXX       XXXXXXXXXX                            +A  GMKLG     K ++++ ++  EDNL   A+  A        G G   A PA      P+ L +EEKI   + R+GAV++ EVKG + LTA T+A A + + + +      +P   N+ THPKV+K+ Y+   +L LK   KGFPVGR VG+LRWS+SS D +  P+++NCWPE+EG G++ ++IE ++   +  LHDVNI IPLGT +PP + ++DG  +HDP    + WH D+VD+S ++G+LEF V G +   FFPI ++F S+ L   + V+ VT   + AP+P  ++K+ + + Y V
Sbjct:    1 MVVLSASVCTRQGKALVSRQFVEMNRLRVEGLLAAFPKLI--GHAKQHTYVETDAVRYVYQPLENNLYLLLITTKASNIVEDLGTLRLLAKVVPDVAGGFQEHAINENAFELIFAFDEVLTAGGYKEDVSLSAIRTNLLMDSHEEKIANALQKSKQDAAKVEMQKKAKTLQEEKMANLRQSFVTGQPTSVPTGRMEGFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKSGMKLGGMGGGKKNSLISAMAAEDNLFGGASAGA------DFGFGAPVAPPA-AAPSTPLTLSLEEKITVSMNREGAVESCEVKGIMNLTANTDAGAAAVIAVNKAQ----LPPSFNYATHPKVDKKGYEQQGILSLKG-GKGFPVGRGVGILRWSHSSEDGA--PISINCWPEDEGNGRIMVNIEMELLRDDLVLHDVNILIPLGTQQPPAIESIDGQMKHDPAAGMMCWHFDVVDASVSNGSLEFSVEGTNPDVFFPIQIAFRSETLLCPIVVTGVTNSSSGAPIPNEMTKTFSAERYQV 543          
The following BLAST results are available for this feature:
BLAST of NO09G00460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ25720.17.900e-14057.73Coatomer protein complex,delta sub-unit [Ectocarpu... [more]
XP_009039377.15.700e-12246.74hypothetical protein AURANDRAFT_38260 [Aureococcus... [more]
OQR95583.12.800e-11342.93coatomer subunit delta [Thraustotheca clavata][more]
XP_002901900.11.100e-10942.20coatomer subunit delta, putative [Phytophthora inf... [more]
XP_008863457.12.700e-10845.77hypothetical protein H310_01900 [Aphanomyces invad... [more]
XP_008891528.13.600e-10842.68hypothetical protein PPTG_02241 [Phytophthora para... [more]
ETI50318.16.100e-10842.33hypothetical protein F443_06102 [Phytophthora para... [more]
ETL43621.11.000e-10742.33hypothetical protein L916_05915 [Phytophthora para... [more]
XP_009825645.14.400e-10646.40hypothetical protein H257_03332 [Aphanomyces astac... [more]
OEU20564.12.400e-10444.36hypothetical protein FRACYDRAFT_223974 [Fragilario... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010510NSK010510Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G00460.1NO09G00460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|528173gene_4513Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G00460.1NO09G00460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G00460 ID=NO09G00460|Name=NO09G00460|organism=Nannochloropsis oceanica|type=gene|length=1804bp
ATGgtatgtatcacaatttagaggcggacgagggctactgtttatcgggt
ccgtttctgtacgcctttgaagcgttgcaatagcattcccgtcattgacc
tcgatgcttcggataacactccttcccctcccctcacagGTGGTGCTTTC
CGGTGCAATCTGCACCAAAAATGGCAAGGCACTGCTTTCCCGACAATTTG
TGGAGATGAGCCGCATCCGCATCGAGGGATTGTTGGCCGCCTTCCCCAAG
CTGCTGGGCTCGGGGGAAGAGAAGCAGCACACTTTTATCGAGACCGAGAC
TGTCCGCTACGTCTACCAGCCTATCGAAAACCTTTTCCTGCTCCTAATAA
CCAACAAGGCCTCCAACATCGTCGAAGACTTAGAGACCCTCCGTCTGTTG
TCCAAGATTGTCCCCGAGGTGGCGGGGGGCGTATCCGAAGAACGGGTAAT
CGACAAGTGCTTCGAGCTCGTCTTCGCCTTTGACGAGGTCCTAACGACGG
GCGGATACCGCGAAAGCGTATCCCTGCAACAAATTAAGACTAACATGGAG
ATGGACTCGCATGAGGAAAAACTTGCATTGATGATCAAGCAGAGCAAGAT
GGACTCAGCCAAGGACCAGGCCGCTCGTCAGGCCAAGGCCATCCGGGAAC
GTCAACGCGAGCTGGCCCGTGACCGGCTGGGGGGGGCCCGAGGTGGCGCG
GGGGGGGCTTACCAGGGCATTGGCGGCGGCGATGGTGGTGGTGATTACAT
GGGTAGGGACGGCGTAGGAGGGTTTGGAGGGGTGCCGGGGGGAGGGTTCG
GGGCTTCGACCGGTGTGTCGTCGTCCTCGTATATGCCCGGCACGGTGGAC
AGCAACTCGGCGTCCATATTGGAAACGGCCCCGACAAAGATTGCGAGCAA
GGGGATGAAGCTTGGGGCGCCGAGCAAGGCCTCGACGATGCTTGACTCGC
TTGTACAGGAGGATAATTTGAGTCATATTGCTACTACCACTGCGATTGCC
CCCACTAGCACAAGGGGAGGGGCAGGTGGGGAGGCTGCGGTTCCAGCCCC
TGTCATCCAGCACCAGCCCATTCAGTTGGTAGTGGAAGAGAAGATCATCG
CGCACCTGACGCGGGATGGGGCGGTGGATGCCTTTGAAGTTAAGGGGTCC
TTGACGCTAACAGCGACCACCGAGGCGGCAGCTCGGTCGAAGGTGGTGCT
CGGGGAGGGCGCGGGGGGAGGCATTGTGCCGGTGGGTTTGAATTTTCAGA
CCCACCCGAAGGTAAATAAGCAGGAGTATGACTCTAGCAAGGTTTTGGTG
CTGAAAGATACGAATAAGGGCTTTCCTGTCGGGCGCCCTGTTGGGGTCCT
CCGGTGGAGCTACTCGTCCACAGATGAGAGCATGGTGCCACTTACGCTCA
ACTGCTGGCCAGAAGAGGAAGGGCAGGGGAAGATGAACATTAGCATTGAA
TATCAGATGAATGGTCAGAACCGGGAATTGCACGATGTGAATATTTCGAT
CCCCTTGGGGACGGCCGAGCCTCCGCAAGTGGCGGCGGTGGACGGTACTT
TCAGGCATGACCCGCGGGAGCAGCGGCTGGTCTGGCACATGGATTTGGTC
GATTCTTCCAACGCGAGTGGGGCGTTGGAATTTGTAGTGGCGGGGAGGGA
TGCAGGGGCTTTCTTTCCGATCATCGTCTCGTTTGCGAGTCAAATGCTGT
ATGCCGATGTGGCGGTGTCGGCAGTTACCGGATTGGAGAATGCCGCCCCA
GTTCCCTACAGTCTGTCCAAGAGCCTGACGCCTGATTCGTACATCGTGGG
CTAG
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protein sequence of NO09G00460.1

>NO09G00460.1-protein ID=NO09G00460.1-protein|Name=NO09G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=556bp
MVVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEEKQHTF
IETETVRYVYQPIENLFLLLITNKASNIVEDLETLRLLSKIVPEVAGGVS
EERVIDKCFELVFAFDEVLTTGGYRESVSLQQIKTNMEMDSHEEKLALMI
KQSKMDSAKDQAARQAKAIRERQRELARDRLGGARGGAGGAYQGIGGGDG
GGDYMGRDGVGGFGGVPGGGFGASTGVSSSSYMPGTVDSNSASILETAPT
KIASKGMKLGAPSKASTMLDSLVQEDNLSHIATTTAIAPTSTRGGAGGEA
AVPAPVIQHQPIQLVVEEKIIAHLTRDGAVDAFEVKGSLTLTATTEAAAR
SKVVLGEGAGGGIVPVGLNFQTHPKVNKQEYDSSKVLVLKDTNKGFPVGR
PVGVLRWSYSSTDESMVPLTLNCWPEEEGQGKMNISIEYQMNGQNRELHD
VNISIPLGTAEPPQVAAVDGTFRHDPREQRLVWHMDLVDSSNASGALEFV
VAGRDAGAFFPIIVSFASQMLYADVAVSAVTGLENAAPVPYSLSKSLTPD
SYIVG*
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Synonyms
Publications