NO08G04330, NO08G04330 (gene) Nannochloropsis oceanica

Overview
NameNO08G04330
Unique NameNO08G04330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3413
Alignment locationchr8:1265728..1269140 +

Link to JBrowse

Properties
Property NameValue
DescriptionCellulase 2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:1265728..1269140 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR001547Glyco_hydro_5
Homology
BLAST of NO08G04330 vs. NCBI_GenBank
Match: EWM26893.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 736.9 bits (1901), Expect = 3.800e-209
Identity = 345/445 (77.53%), Postives = 384/445 (86.29%), Query Frame = 0
Query:    1 MPSLSALLRLATQGALALLPSSAPQGTTTNAAIXXXXXXXXXXXITPSLRGLGHQK-TVAADSPIDLGTGKLTWTGTHKEIRVNGHSWKLKGLSWFGLEVGDSNVLLGLNRRSLDEILQFLVDNNFNAIRIPFSTKWALDYDSTVRGSFRDGGIDGQLSRRDFLNKVISRAADYKILVMLDSHRLDDQSIPELWYSPEYPYEAMLQAWDTILGDVKHHWNVFAIDLKNEPHGLATWGTGDESTDWNTAAEKIGAHLLEKHPEFTGLVFVEGLGYSIEFESIKAHPINFGKREWNDRLVYSPHQYGPSVTGDEHFKGYVNFPDSQLSEWERCWGFIEETTGHACVLGEWGGQYDSYHNDKDVVWQNRFAKYLVEKCLSDQFVWDLNPESGDTGGVLKSNWWDEEEAKLALYHTVQPHPSWLYKEGDHFYLEPGKYANPKCDPNNKR 445
            M S+S L+RLATQG LALLP+S+P+G+ T+A++           +TP LRGL +   T A   PIDLG  +LTWTGT+KE+RVNG ++ LKGLSWFGLEVGDSN+LLGLN R LDEILQFLVDNNFNAIR+PFSTKWALDYD+ VRG FRDG I+ QLSRR FLNK I RAAD+KILVMLDSHRL+DQ IPELWYS EY  E ML AWD +LGD+KHHWN+FAIDLKNEPHG ATWG+G+ +TDWNTAAEKIG HLL KHPEF GLVFVEGLGYSIEFE IK HPI+FGK E+N+RLVYSPHQYGPSVTGD HF GYVNFP SQLSEWERCWGFIEE TGHACVLGEWGG+YDSYHNDKD+VWQ+RFAKYLVEKC+SDQFVWDLNPESGDTGGVLK+NWWD EE KLALY TVQPHPSWL+KEGD FYLEPG+YANPKCDP NK+
Sbjct:    1 MASISNLMRLATQGVLALLPTSSPEGSITDASL-----ASATNSVTPLLRGLAYPSFTKAMHGPIDLGKEELTWTGTNKELRVNGKTFHLKGLSWFGLEVGDSNMLLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGVRGYFRDGDIN-QLSRRQFLNKFIERAADFKILVMLDSHRLNDQEIPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGLGYSIEFEKIKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWLWKEGDTFYLEPGEYANPKCDPYNKK 439          
BLAST of NO08G04330 vs. NCBI_GenBank
Match: EWM26490.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 351.3 bits (900), Expect = 4.500e-93
Identity = 173/398 (43.47%), Postives = 245/398 (61.56%), Query Frame = 0
Query:   62 SPIDLGTGKLTWTGTHKEIRVNGHSWKLKGLSWFGLEVGDSNVLLGLNRRSLDEILQFLVDNNFNAIRIPFSTKWALDYDSTVRGSFRDGGIDGQLSRRDFLNKVISRAADYKILVMLDSHRLDDQSIPELWYSPEYPYEAMLQAWDTILGDVKHHWNVFAIDLKNEPHGLATWGTGDESTDWNTAAEKIGAHLLEKHPEFTGLVFVEGL---------------GYSIEFESIKAHPINFGKREWNDRLVYSPHQYGPSVTGDEHFKGYVNFPDSQLSEWERCWGFIEETTGHACVLGEWGGQYDSYHNDKDVVWQNRFAKYLVEKCLSDQFVWDLNPESGDTGGVLKSNWWDEEEAKLALYHTVQPHPSWLYKEG-DHFYLEPGKYANPKCDPNNK 444
            +P DL    L WT    EI +NG  + LKG+S+FG E   + V  GL   + D+I  FL + +FNA+R+PFST  AL+ +  V  +  +  +   L+  + +  +I +AA+Y IL+MLD HRL++  IPELWY  +Y  + + +AWD +L      WN+FAIDLKNEPHG+ATWG+G  +TDWNTAAE++  +L +KHP++ GLVFVEG                 +  + E ++  PI+ G    N RLVYSPH YGP      +F+   NFPD+    W++ W F+EE T  A V+GEWGG+Y+    ++D +WQ+ FAK+LV++CL D F W LNP SGDTGG+L  ++      KLAL   VQPHP+++  +G D + + PG YANPKCD   +
Sbjct:   60 TPADLCVASLDWTSEGGEILLNGQPFHLKGVSYFGFET-PNEVPHGLWSVTRDQIFGFLRNESFNAVRLPFSTALALEPNKKVNANTIEKELH-DLTALELIGNIIDKAAEYGILIMLDMHRLNEDFIPELWYDDKYSMDDVKEAWDNLLTAFGDRWNLFAIDLKNEPHGVATWGSGKATTDWNTAAEELATYLYKKHPQYKGLVFVEGTQLASAKHHKLDKNNKWWGGDLEGVQEFPIDLGSDALNKRLVYSPHVYGPDAFVQPYFEA-KNFPDNMPDIWKKQWAFVEEQTDRAVVVGEWGGRYE----NQDKIWQDSFAKFLVDECLEDTFYWCLNPNSGDTGGLLDYDFLTPMPKKLALLAKVQPHPTFITVKGSDQYCISPGAYANPKCDKGRR 450          
BLAST of NO08G04330 vs. NCBI_GenBank
Match: EWM20925.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 299.7 bits (766), Expect = 1.500e-77
Identity = 151/366 (41.26%), Postives = 208/366 (56.83%), Query Frame = 0
Query:   69 GKLTWTGTHKEIRVNGHSWKLKGLSWFGLEVGDSNV--LLGLNRRSLDEILQFLVDNNFNAIRIPFSTKWALDYDSTV--RGSFRDGGIDGQLSRRDFLNKVISRAADYKILVMLDSHRLD-DQSIPELWYSPEYPYEAMLQAWDTILGDVKHHWNVFAIDLKNEPHGLATWGTGDESTDWNTAAEKIGAHLLEKHPEFTGLVFVEGL------GYSIEFESIKAHPINFGKREWNDRLVYSPHQYGPSVTGDEHFKGYVNFPDSQLSEWERCWGFIEETTGHACVLGEWGGQYDSYHNDKDVVWQNRFAKYLVEKCLSDQFVWDLNPESGDTGGVLKSNWWDEEEAKLALYHTVQPHPSWLYKEG 424
            G LTWT   + + VN   +++KG++WFG E  D  V  L G   ++L + L  L  + FNAIR+PFS K AL  D+T    G  +       L+    ++K++  A    ++VMLD HRLD D+ I +LWY   Y    +L++WD +L   K HWNVFA+DLKNEPHG  +WG+G+  TDW  A+E+I  H+   HP+F GL FV G+       +   F  ++ HP++ G    N R+VY+PH YGP V    +F  + +FPD+  + W+  WGF+      A V+ EWGG    +   KD  WQ R A+YL EK ++D F W LNP SGDTGG+L  +W    E KL L   VQP PS L   G
Sbjct:   14 GPLTWTSERRMVLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGGGGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSW-SFPDNLPAVWDLHWGFLSGVLETAVVVSEWGG----FCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRLLPLG 374          
BLAST of NO08G04330 vs. NCBI_GenBank
Match: AFA52581.1 (putative endogluconase [Vaucheria litorea])

HSP 1 Score: 252.7 bits (644), Expect = 2.200e-63
Identity = 149/422 (35.31%), Postives = 219/422 (51.90%), Query Frame = 0
Query:   46 TPSLRGLGHQKTVAADSPIDLGTGKLTWTGTHKEIRVNGHSWKLKGLSWFGLEVGDSNVLLGL-NRRSLDEILQFLVDNNFNAIRIPFSTKWALDYDSTVRGSFRDGGIDGQLSRRDFLNKVISRAADYKILVMLDSHRLDDQSIPELWYSPEYPYEAMLQAWDTILGDVKHHWNVFAIDLKNEPHGLATWGTGDESTDWNTAAEKIGAHLLEKHPEFTGLVFVEGLG------------------YSIEFESIKAHPINFGKREWNDRLVYSPHQYGPSVTGDEHFKGYVNFPDSQLSEWERCWGFIEETTGHACVLGEWGGQYDSYHNDKDVVWQNRFAKYLVEKCLSDQFVWDLNPESGDTGGVLKSNW-----WDEEEAKLALYHTVQPHPSWLYK--EGDHFYLEPGKYANPKCDPN 442
            TPS  GLG  +++   +      G++ W+     I +NG  ++LKG +WFG      N+L GL    ++DE+L FL  N+FN +RIP S   ALD + T    ++       LS  D + +++ +AA+  +LV+ D H+L D    ELWYS  YP E  ++ W  I+       N   IDL NEPH  ATWG G E TDWN  AE+I   ++E+ P +  L+FVEG+                   +   F  +    ++FG  E N  LVYSPH YGP +   ++F    +FPD+    WE+  GFIE  TG A ++GEWGG+ +     KD + Q ++ +Y+++ C+S  F W + P SGD GG+L  +W      D +  KL L    QP PS   +   GD + L+ G +A+  C  N
Sbjct:   22 TPS-HGLGEDRSLQNSNCF----GEMVWSVFQGNILLNGVPFRLKGANWFGFNT-SLNILHGLWGDVTMDEVLDFLAANDFNGLRIPLSLSLALD-NQTKISQYQCVECTSDLS-WDAIERLMDKAAERGLLVLFDFHKLADGESTELWYSDNYPEEKFIEGWVNIIEKFGSWPNFMGIDLFNEPHISATWGKGLE-TDWNKGAERIVQGIVEQIPTYNKLIFVEGISSGGSSTPYDEDDPANDQFWGSNFFGLYDAEVDFGTPELNKLLVYSPHIYGPDLYDHDYFNA-SDFPDNMPEIWEKQIGFIESLTGKAVIIGEWGGKMEG----KDAILQEKWVQYMLDACISGSFYWSVTPNSGDLGGLLTESWDIPQSGDTQFFKLTLIAEAQPTPSLFTQPISGDQYCLDFGAFADNSCWTN 429          
BLAST of NO08G04330 vs. NCBI_GenBank
Match: PDM84795.1 (hypothetical protein PRIPAC_33818 [Pristionchus pacificus])

HSP 1 Score: 245.0 bits (624), Expect = 4.500e-61
Identity = 130/359 (36.21%), Postives = 199/359 (55.43%), Query Frame = 0
Query:   89 LKGLSWFGLEVGDSNVLLGLNRRSLDEILQFLVDNNFNAIRIPFSTKWALDYDSTVR-GSFRDGGIDGQLSRRDFLNKVISRAADYKILVMLDSHRL-DDQSIPELWYSPEYPYEAMLQAWDTILG-------DVKHHWNVFAIDLKNEPHGLATWGTGDESTDWNTAAEKIGAHLLEKHPEFTGLVFVEGLGYSIEFESIKAHPINFGKREWNDRLVYSPHQYGPSVTGDEHFKGYVNFPDSQLSEWERCWGFIEETTGHACVLGEWGGQYDSYHNDKDVVWQNRFAKYLVEKCLSDQFVWDLNPESGDTGGVLKSNWWDEEEAKLALYHTVQPHPSWLYKEGDHFYLEPGKYANPKC 439
            LKG+++FG E  ++    G+    L+  L F+ +NNFNAIR+PFS +   +  S +      + G+ G+ + +  L+  I RAA+  +L+MLD+HR+     I ELWY+ EYP   ++  W +++         +K  WNVFAIDLKNEPH  A+WG  + +TDWN AAE+I    +     F GL FVEG+ +    E++   PIN G    N+R++YSPH YGPSV     F    +FP++    +   +GFI   TGH  V+GEWGG+ +     +D+ W   + ++L  KC+++ F W LNP S DTGG+L+ +W      K+ L +  QP+P+    +     +  G +    C
Sbjct:   25 LKGINYFGFE-SETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCGSNPGLCGKTALQ-LLDAFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQVISLWQSLITRYSDRQVQLKWIWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERI----INSLSSFPGLFFVEGIEWGNRLENVAQFPINTGNASLNNRVIYSPHCYGPSVYDRPEFNTQ-DFPNNLDGIYMAKYGFIVNQTGHPVVVGEWGGRAEV--GSRDMAWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPTPRKINLTNRAQPNPTKFQPQNGQICITAGAFPEAHC 374          
BLAST of NO08G04330 vs. NCBI_GenBank
Match: EWM26661.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 243.8 bits (621), Expect = 1.000e-60
Identity = 145/414 (35.02%), Postives = 214/414 (51.69%), Query Frame = 0
Query:   46 TPSLRGLGHQKTVAADSPIDLGTGKLTW-TGTHKEIRVNGHSWKLKGLSWFGLEVGDSNVLLGLNRRSLDEILQFLVDNNFNAIRIPFSTKWAL-DYDSTVRGSFRDGGIDGQLSRRDFLNKVISRAADYKILVMLDSHRLDDQSIPELWYSPEYPYEAMLQAWDTILGDVKHHWNVFAIDLKNEPHGLATWGTGDESTDWNTAAEKIGAHLLEKHPEFTGLVFVEGLGYSIEFESIKAHPI----NFGKR----------EWNDRLVYSPHQYGPSVTGDEHFKGYVNFPDSQLSE-----WERCWGFIEETTGHACVLGEWGGQYDSYHNDKDVVWQNRFAKYLVEKCLSDQFVWDLNPESGDTGGVLKSNWWDEEEAKLALYHTVQPHPSWLYKEGDHFYLEPGKYANPKC 439
            TPSL  L  + T   D+  D  +  L W +G   +I  N   + +KG+SWFG E G      GLN  ++D IL F + + FN +RIP S  + L   D      F   G+ G+ +  + L++VI +AA   ++VMLD H L  Q   +LWY  +Y    +LQAW  I+      WNVFA+DLKNEPHG+ATWG     TD+N   E+  AH+  + P + GL  VEG+ Y+ E + +  +P     NFG            E  +R+VYSPH YGP    D +   Y+N P ++L+      W+   G++        ++GEWGG        +D + Q   AK+LV+ C+++   W +NPES DTGG++  NW   ++ +L L  ++ P P+    +     L  G Y NP+C
Sbjct:   54 TPSLDEL--RATFVPDTCFD--SFDLAWSSGKDGQIYANTAPFFVKGISWFGCE-GHGYTFTGLNFTTVDTILNFFLQHKFNTVRIPVSVAFGLAPKDFKPNQRFVGKGLKGK-TIWEILDEVIDQAALRGLMVMLDMHTLGPQEATDLWYDEQYKEADILQAWSNIMAAYSIKWNVFALDLKNEPHGIATWGVSAPQTDYNKFYERAIAHIHTQFPNWKGLYMVEGVQYNKETDKVTDYPFWWGGNFGGAIQHPIYVPVPEVMNRVVYSPHVYGP----DVYDHPYMNVPAAELANELVKVWDSQMGWLIPKLQKGMIIGEWGGSL----KGRDEIVQTELAKWLVKNCMANNVWWAINPESSDTGGIMAWNWKTYDKRRLDLVDSIFPDPTQFGIKHSKLCLRFGTYPNPQC 453          
BLAST of NO08G04330 vs. NCBI_GenBank
Match: ADV58303.1 (cellulase 1, partial [Pristionchus pacificus])

HSP 1 Score: 241.5 bits (615), Expect = 5.000e-60
Identity = 131/365 (35.89%), Postives = 198/365 (54.25%), Query Frame = 0
Query:   73 WTGTHKEIRVNGHSWKLKGLSWFGLEVGDSNVLLGLNRRSLDEILQFLVDNNFNAIRIPFSTKWALDYDSTVRGSFRDGGIDGQLSRRDFLNKVISRAADYKILVMLDSHRLDDQSI--PELWY--SPEYPYEAMLQAWDTILGDVKHHWNVFAIDLKNEPHGLATWGTGDESTDWNTAAEKIGAHLLEKHPEFTGLVFVEGLGYSIEFESIKAHPINFGKREWNDRLVYSPHQYGPSV--TGDEHFKGYVNFPDSQLSEWERCWGFIEETTGHACVLGEWGGQYDSYHNDKDVVWQNRFAKYLVEKCLSDQFVWDLNPESGDTGGVLKSNWWDEEEAKLALYHTVQPHPSWLYKEGDHFYLEPG 432
            WT     I VNG    LKG+++FG E  ++    G+   +L+++L F+ DNNFNAIR+PFS +   D    +     +       S    L+  I RAA+  +L++LD+HR        P LWY  S  YP + +++ W  ++   K+HWNVFAIDLKNEP   ATWG  + +TDWN AAE+    ++    EF G  FV G+ +   FE+   +PI  G+   N+R+VYSPH YGP V    + H +    +  +    +   +GF+ E  G+  V+GEWGG+  +    +D  W N F  ++ +KC+++ F W LNP SG TGG+L+ +W    + KL L +  QP+P+   K  +   +  G
Sbjct:    2 WTTDDGRIMVNGQPLVLKGVNYFGFET-ETYAPHGIWDHNLNDMLDFIKDNNFNAIRVPFSMEMVRDNPVIMNVHCHNNPNLCGTSALRMLDIFIDRAAERGLLIVLDNHRTQSGGYISPPLWYNNSAGYPEDEVIRLWKQLVMKYKNHWNVFAIDLKNEPRDAATWGRSNRNTDWNQAAER----MINALHEFPGFFFVGGIEWGGRFENAAQYPIETGRAHLNERVVYSPHCYGPDVYDRSEFHVENTHEYAKNLDRIYTAKYGFLAE-KGYPVVIGEWGGK--AKPGTRDAKWNNWFVDWIRDKCMTNNFYWALNPNSGHTGGLLEDDWKTPIQHKLDLVNRAQPNPTKFKKHNEKICITKG 358          
BLAST of NO08G04330 vs. NCBI_GenBank
Match: ADV58308.1 (cellulase 1, partial [Pristionchus pacificus])

HSP 1 Score: 241.5 bits (615), Expect = 5.000e-60
Identity = 131/365 (35.89%), Postives = 198/365 (54.25%), Query Frame = 0
Query:   73 WTGTHKEIRVNGHSWKLKGLSWFGLEVGDSNVLLGLNRRSLDEILQFLVDNNFNAIRIPFSTKWALDYDSTVRGSFRDGGIDGQLSRRDFLNKVISRAADYKILVMLDSHRLDDQSI--PELWY--SPEYPYEAMLQAWDTILGDVKHHWNVFAIDLKNEPHGLATWGTGDESTDWNTAAEKIGAHLLEKHPEFTGLVFVEGLGYSIEFESIKAHPINFGKREWNDRLVYSPHQYGPSV--TGDEHFKGYVNFPDSQLSEWERCWGFIEETTGHACVLGEWGGQYDSYHNDKDVVWQNRFAKYLVEKCLSDQFVWDLNPESGDTGGVLKSNWWDEEEAKLALYHTVQPHPSWLYKEGDHFYLEPG 432
            WT     I VNG    LKG+++FG E  ++    G+   +L+++L F+ DNNFNAIR+PFS +   D    +     +       S    L+  I RAA+  +L++LD+HR        P LWY  S  YP + +++ W  ++   K+HWNVFAIDLKNEP   ATWG  + +TDWN AAE+    ++    EF G  FV G+ +   FE+   +PI  G+   N+R+VYSPH YGP V    + H +    +  +    +   +GF+ E  G+  V+GEWGG+  +    +D  W N F  ++ +KC+++ F W LNP SG TGG+L+ +W    + KL L +  QP+P+   K  +   +  G
Sbjct:    2 WTTDDGRIMVNGQPLVLKGVNYFGFET-ETYAPHGIWDHNLNDMLDFIKDNNFNAIRVPFSMEMVRDNPVIMNVHCHNNPNLCGTSALRMLDIFIDRAAERGLLIVLDNHRTQSGGYISPPLWYNNSAGYPEDEVIRLWKQLVMKYKNHWNVFAIDLKNEPRDAATWGRSNRNTDWNQAAER----MINALHEFPGFFFVGGIEWGGRFENAAQYPIETGRAHLNERVVYSPHCYGPDVYDRSEFHVENTHEYAKNLDRIYTAKYGFLAE-KGYPVVIGEWGGK--AKPGTRDAKWNNWFVDWIRDKCMTNNFYWALNPNSGHTGGLLEDDWKTPIQHKLDLVNRAQPNPTKFKKHNEKICITKG 358          
BLAST of NO08G04330 vs. NCBI_GenBank
Match: ADV58302.1 (cellulase 1, partial [Pristionchus pacificus])

HSP 1 Score: 240.7 bits (613), Expect = 8.500e-60
Identity = 131/365 (35.89%), Postives = 197/365 (53.97%), Query Frame = 0
Query:   73 WTGTHKEIRVNGHSWKLKGLSWFGLEVGDSNVLLGLNRRSLDEILQFLVDNNFNAIRIPFSTKWALDYDSTVRGSFRDGGIDGQLSRRDFLNKVISRAADYKILVMLDSHRLDDQSI--PELWY--SPEYPYEAMLQAWDTILGDVKHHWNVFAIDLKNEPHGLATWGTGDESTDWNTAAEKIGAHLLEKHPEFTGLVFVEGLGYSIEFESIKAHPINFGKREWNDRLVYSPHQYGPSV--TGDEHFKGYVNFPDSQLSEWERCWGFIEETTGHACVLGEWGGQYDSYHNDKDVVWQNRFAKYLVEKCLSDQFVWDLNPESGDTGGVLKSNWWDEEEAKLALYHTVQPHPSWLYKEGDHFYLEPG 432
            WT     I VNG    LKG+++FG E  ++    G+   +L+++L F+ DNNFNAIR+PFS +   D    +     +       S    L+  I RAA+  +L++LD+HR        P LWY  S  YP   +++ W  ++   K+HWNVFAIDLKNEP   ATWG  + +TDWN AAE+    ++    EF G  FV G+ +   FE+   +PI  G+   N+R+VYSPH YGP V    + H +    +  +    +   +GF+ E  G+  V+GEWGG+  +    +D  W N F  ++ +KC+++ F W LNP SG TGG+L+ +W    + KL L +  QP+P+   K  +   +  G
Sbjct:    2 WTTDDGRIMVNGQPLVLKGVNYFGFET-ETYAPHGIWDHNLNDMLDFIKDNNFNAIRVPFSMEMVRDNPVIMNVHCHNNPNLCGTSALRMLDIFIDRAAERGLLIVLDNHRTQSGGYISPPLWYNNSAGYPENEVIRLWKQLVMKYKNHWNVFAIDLKNEPRDAATWGRSNRNTDWNQAAER----MINALHEFPGFFFVGGIEWGGRFENAAQYPIETGRAHLNERVVYSPHCYGPDVYDRSEFHVENTHEYAKNLDRIYTAKYGFLAE-KGYPVVIGEWGGK--AKPGTRDAKWNNWFVDWIRDKCMTNNFYWALNPNSGHTGGLLEDDWKTPIQHKLDLVNRAQPNPTKFKKHNEKICITKG 358          
BLAST of NO08G04330 vs. NCBI_GenBank
Match: ADV58289.1 (cellulase 1, partial [Pristionchus pacificus])

HSP 1 Score: 238.8 bits (608), Expect = 3.200e-59
Identity = 130/365 (35.62%), Postives = 198/365 (54.25%), Query Frame = 0
Query:   73 WTGTHKEIRVNGHSWKLKGLSWFGLEVGDSNVLLGLNRRSLDEILQFLVDNNFNAIRIPFSTKWALDYDSTVRGSFRDGGIDGQLSRRDFLNKVISRAADYKILVMLDSHRLDDQSI--PELWY--SPEYPYEAMLQAWDTILGDVKHHWNVFAIDLKNEPHGLATWGTGDESTDWNTAAEKIGAHLLEKHPEFTGLVFVEGLGYSIEFESIKAHPINFGKREWNDRLVYSPHQYGPSV--TGDEHFKGYVNFPDSQLSEWERCWGFIEETTGHACVLGEWGGQYDSYHNDKDVVWQNRFAKYLVEKCLSDQFVWDLNPESGDTGGVLKSNWWDEEEAKLALYHTVQPHPSWLYKEGDHFYLEPG 432
            WT     I VNG    LKG+++FG E  ++    G+   +L+++L F+ DNNFNAIR+PFS +   D    +     +       S    L+  I RAA+  +L++LD+HR        P LWY  S  YP + +++ W  ++   K+ WNVFAIDLKNEP   ATWG  + +TDWN AAE+    ++    EF G  FV G+ +   FE+   +PI+ G+   N+R+VYSPH YGP V    + H +    +  +    +   +GF+ E  G+  V+GEWGG+  +    +D  W N F  ++ +KC+++ F W LNP SG TGG+L+ +W    + KL L +  QP+P+   K  +   +  G
Sbjct:    2 WTTDDGRIMVNGQPLVLKGVNYFGFET-ETYAPHGIWDHNLNDMLDFIKDNNFNAIRVPFSMEMVRDNPVIMNVHCHNNPNLCGTSALRMLDIFIDRAAERGLLIVLDNHRTQSGGYISPPLWYNNSAGYPEDEVIRLWKQLVMKYKNQWNVFAIDLKNEPRDAATWGRSNRNTDWNQAAER----MINALHEFPGFFFVGGIEWGGRFENAAQYPIDSGRAHLNERVVYSPHCYGPDVYDRSEFHVENTHEYAKNLDRIYTAKYGFLAE-KGYPVVIGEWGGK--AKPGTRDAKWNNWFVDWIRDKCMTNNFYWALNPNSGHTGGLLEDDWKTPIQHKLDLVNRAQPNPTKFKKHNEKICITKG 358          
The following BLAST results are available for this feature:
BLAST of NO08G04330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26893.13.800e-20977.53cellulase 2 [Nannochloropsis gaditana][more]
EWM26490.14.500e-9343.47cellulase 2 [Nannochloropsis gaditana][more]
EWM20925.11.500e-7741.26cellulase 2 [Nannochloropsis gaditana][more]
AFA52581.12.200e-6335.31putative endogluconase [Vaucheria litorea][more]
PDM84795.14.500e-6136.21hypothetical protein PRIPAC_33818 [Pristionchus pa... [more]
EWM26661.11.000e-6035.02cellulase 2 [Nannochloropsis gaditana][more]
ADV58303.15.000e-6035.89cellulase 1, partial [Pristionchus pacificus][more]
ADV58308.15.000e-6035.89cellulase 1, partial [Pristionchus pacificus][more]
ADV58302.18.500e-6035.89cellulase 1, partial [Pristionchus pacificus][more]
ADV58289.13.200e-5935.62cellulase 1, partial [Pristionchus pacificus][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL105nonsL105Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006533NSK006533Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G04330.1NO08G04330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583438gene_3785Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100103g7gene3641Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G04330.1NO08G04330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G04330 ID=NO08G04330|Name=NO08G04330|organism=Nannochloropsis oceanica|type=gene|length=3413bp
AGAAAGTCCAAAAGATCGCTGTCTTGCTTGAATTACACCAGGGAGTCATA
AGCGTTGTCCGCTTTGACTTTTCTGGCTCACGATGGCTCGCTGCTATGGA
CCTTCTCATTTCCCTTGCTGTCTGTCCTTCTTGTCTTGGTTTGGCCCATT
GCAGTGTACATGTATACATCTCTCTCTTTTGTTCCATGAGTGGTAAAGTT
TCACGCTCCCATCGCACCAGGAAGGCATCCACACGATTATCCTCGTTGAT
TGAGCATAGTGCGAGGATTTAGCAGACCGATGATAGGCGCCATACATAAC
GAGATATCTCTTTGTCCTTCCTCACACCACCTATTCTCACGACCTACCTC
AATCCGTGCACTGACTGACATAATATCCATTTTCACACAGACATCGGCTC
TACCATCGCCTACACAGCATTACTCATTTTATCAGCACCCACCCACGACG
CTATACACAAACCATGCCCAGCCTATCCGCCTTGCTGCGCCTCGCGACCC
AAGGGGCCTTGGCCCTGCTCCCTTCCTCTGCCCCCCAAGGCACCACCACC
AACGCCGCCATCACAACAACTGCGGCAACTCCAGCAACACCAGCGATCAC
GCCATCTCTCCGCGGTCTAGGCCACCAAAAGACGGTTGCGGCAGACAGTC
CTATCGATCTGGGGACCGGGAAGTTGACTTGGACAGGCACACACAAGGAG
ATTCGTGTGAATGGACACAGCTGGAAGCTTAAAGGACTGTCATGGTTCGG
TCTTGAGgtatgtttgtatgaatctcactcaacagcactcaacagaagcg
taatggtttgacttataaaatcttgtttgtaccgtctgtcaccgccaggg
agactttcccctctgcagggcttccctcctgtccctctccccctatttcc
tctgcctccacggtgggcatcccacagctctcatccaaatttcgagtatt
ctaggcgtaactcacaaccgtttcactaaatttattgacatctcccactc
cctcccgccttctttttagGTCGGCGACTCGAACGTGCTCCTAGGCCTCA
ACAGGCGGAGCCTGGATGAGATCTTGCAATTCCTGGTCGACAACAACTTC
AACGCCATCCGCATCCCCTTCTCCACCAAGTGGGCCTTGGACTACGATAG
CACTGTGCGAGGTTCTTTCCGGGACGGGGGCATTGATGGCCAGCTGTCTC
GCCGTGACTTTTTGAATAAGGTCATTTCCCGGGCTGCGGATTACAAGATT
CTGGTCATGCTCGACAGCCACCgtgagtacttgctcctggttgccgagaa
cgtcttagtggggctatggctgtgcattcttgaagacagaggagtctctt
gcaaaaagaaaaggcatggcaccacgactagtaacatttccccctcattc
ctccctctctccccaccccctttgccctcttccccaacacacagGTCTGG
ACGATCAGTCCATCCCCGAACTGTGGTACTCGCCGGAGTACCCGTACGAG
GCGATGTTGCAGGCCTGGGACACCATCTTGGGGGATGTAAAGCATCACTG
GAATGTGTTTGCCATCGgtgagaggggagggagggagggaagaaggaggg
gaacgcagtgcgcggtttgtaattttaggcagaaaaagcctagttatttc
tcctttcctctctctttgcgtacatctattaatgctccctatctcttaaa
ctcatacgacctttcatgcctccctgacatactacatttagACTTGAAAA
ATGAGCCCCACGGCCTGGCCACCTGGGGCACTGGCGACGAGTCCACGGAC
TGGAACACGGCCGCGGAGAAAATCGGCGCGCATTTGTTAGgtgggtacac
gaattaatgaagcatcttgcttccttctttctctctcctacacaaacacc
aaaggatgattgaaaatctttctctctttatgtctattattgagtaagtg
tgtgtgtgtgtctgtgtctgtgtctgtgtctgtgtttctgtgtctctgtg
tctctgtgtctctgtgtctctgtgtctctgtgtgtctgtgtgtctgtgtg
tctgtgtgtctctgtgtgtctgtgtgtgtgtgcatgtgtgtctctgtgtg
tctctgtgtgcctgcgtgtctgtgtgtctgtgtgtgcttgtgtgtctctg
tgtgtgtatgtgtgtgtatgtgtgatcagagcctcgtacgttttatgtct
tcgtgtcttaccttctttttcactcccccatctccaaaccgacgacaaac
aaacagAGAAGCACCCGGAGTTCACGGGGTTGGTTTTTGTTGAGGGCCTG
GGATACTCAATCGAGTTTGAGTCGATCAAGGCCCACCCGATTAATTTTGG
GAAGAGGGAGTGGAACGACCGGCTGGTCTACTCGCCTCATCAGTACGGCC
CGTCGGTGACAGgtaaggaagagaaagagagggagggagcgagcaagcga
gagggagggagagagggagaaaaggtgggcgctctgaagaataaggggag
gggcgaatgtgcatgtcattaactatccaacccgtgctttcccccccagG
CGATGAGCACTTCAAGGGGTACGTCAACTTCCCCGACTCGCAGCTGAGTG
AGTGGGAGCGCTGCTGGGGCTTCATCGAGGAGACGACAGGACACGCCTGC
GTGCTGGGGGAGTGGGGCGGGCAGTACGACAGCTACCACAACGACAAGGA
CGTGGTGTGGCAGAATCGGTTTGCCAAATATCTGGTGGAGAAATGCCTGA
GCGATCAGTTCGTGTGGGACCTGAACCCGGAGAGTGGAGATACGGGAGGA
GTGTTGAAATCCAACTGGTGGGATGAGGAGGAAGCGAAGCTTGCGCTGTA
TCACACGGTGCAGCCTCATCCGTCCTGGTTGTACAAAGAGGGCGACCACT
TTTATTTGGAGCCGGGGAAGTACGCGAATCCAAAGTGTGACCCCAACAAC
AAGAGGCAGTGAGGATGAGGGAGGGAGAGAGAGAGGGAGGGTTAGGAAGT
AGCAGGTGTGCATTGGAGATGCGCCTTGGTACAATTTTATTTGCGGGAAA
AAGGGAGGAAGGGAGGAGGGGAGTGTGTCTATCCTATCACTGAGGGCGGC
TTGAATGGCTGCTTTGTATTTCTATGTTTGCATAAAGGGAAAGCAAGTCA
TTCACTCTAACCCTTGCAAACCGAGAAGGGAAGGAGGGATTGGTCTACGT
GAGGTATGTAAGCGTGTAAACCCACTGAGTAGGGCTGACGTATTGCAACA
ATGAGAAACAACAGCAGCAGTAGCAGCAGCGATAAGAGCAGTAGATTCAG
CAGTAGCAAAAGTACTTCGGCAAGCCAGAAGAACAGGAATGCCAAAGGCA
ACAATCAAAGCACTAGCCCATCCACGGCAAAGACCAGTGTATCTCACCCA
GCTTCACGTTGAC
back to top

protein sequence of NO08G04330.1

>NO08G04330.1-protein ID=NO08G04330.1-protein|Name=NO08G04330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=446bp
MPSLSALLRLATQGALALLPSSAPQGTTTNAAITTTAATPATPAITPSLR
GLGHQKTVAADSPIDLGTGKLTWTGTHKEIRVNGHSWKLKGLSWFGLEVG
DSNVLLGLNRRSLDEILQFLVDNNFNAIRIPFSTKWALDYDSTVRGSFRD
GGIDGQLSRRDFLNKVISRAADYKILVMLDSHRLDDQSIPELWYSPEYPY
EAMLQAWDTILGDVKHHWNVFAIDLKNEPHGLATWGTGDESTDWNTAAEK
IGAHLLEKHPEFTGLVFVEGLGYSIEFESIKAHPINFGKREWNDRLVYSP
HQYGPSVTGDEHFKGYVNFPDSQLSEWERCWGFIEETTGHACVLGEWGGQ
YDSYHNDKDVVWQNRFAKYLVEKCLSDQFVWDLNPESGDTGGVLKSNWWD
EEEAKLALYHTVQPHPSWLYKEGDHFYLEPGKYANPKCDPNNKRQ*
back to top
Synonyms
Publications