NO08G03720, NO08G03720 (gene) Nannochloropsis oceanica

Overview
NameNO08G03720
Unique NameNO08G03720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1836
Alignment locationchr8:1049495..1051330 -

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Properties
Property NameValue
DescriptionRibose 5-phosphate isomerase A
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:1049495..1051330 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009052pentose-phosphate shunt, non-oxidative branch
GO:0006091generation of precursor metabolites and energy
Vocabulary: Molecular Function
TermDefinition
GO:0004751ribose-5-phosphate isomerase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR037171NagB/RpiA_transferase-like
IPR004788Ribose5P_isomerase_typA
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO08G03720 vs. NCBI_GenBank
Match: XP_005854001.1 (ribose 5-phosphate isomerase A [Nannochloropsis gaditana CCMP526] >EKU22356.1 ribose 5-phosphate isomerase A [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 504.2 bits (1297), Expect = 2.600e-139
Identity = 260/282 (92.20%), Postives = 270/282 (95.74%), Query Frame = 0
Query:    1 MSRQKTLFSVMAMVTVGASAFILPVRQPLHGPALCTRRASTTTARFAVSQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGQKLKAGELKDIVAIPTSIRTKEQAEGLGIPLVTLDTHSVLDVAIDGADEVDPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILGLPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTAPIADVMAVAGALEKVVGVVEHGFFLDMTTAVIVAGKTGIDVINKK 283
            M+RQK +FSVMAMVTVGASAFILP++QPL+GPALC +RAS +TARFAVSQDELKKQVGYKSVDDYV SGMVVGLGTGSTAAFAVERLG KLKAGELKDIVAIPTSIRTKEQAE LG+PLVTLD+HSVLDVAIDGADEVDPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTIL LPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYT PIADV AVA ALE VVGVVEHGFFLDMTTAVIVAGK GI+VINKK
Sbjct:    1 MARQKNIFSVMAMVTVGASAFILPLKQPLNGPALCVQRAS-STARFAVSQDELKKQVGYKSVDDYVQSGMVVGLGTGSTAAFAVERLGMKLKAGELKDIVAIPTSIRTKEQAESLGVPLVTLDSHSVLDVAIDGADEVDPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINKK 281          
BLAST of NO08G03720 vs. NCBI_GenBank
Match: EWM26792.1 (ribose-5-phosphate isomerase [Nannochloropsis gaditana])

HSP 1 Score: 402.5 bits (1033), Expect = 1.100e-108
Identity = 218/282 (77.30%), Postives = 226/282 (80.14%), Query Frame = 0
Query:    1 MSRQKTLFSVMAMVTVGASAFILPVRQPLHGPALCTRRASTTTARFAVSQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGQKLKAGELKDIVAIPTSIRTKEQAEGLGIPLVTLDTHSVLDVAIDGADEVDPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILGLPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTAPIADVMAVAGALEKVVGVVEHGFFLDMTTAVIVAGKTGIDVINKK 283
            M+RQK +FSVMAMVTVGASAFILP++QPL+GPALC +RAS +TARFAVSQDELKKQVGYKSVDDYV SGMVVGLGTGSTAAFAVERLG KLKA                                             DPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTIL LPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYT PIADV AVA ALE VVGVVEHGFFLDMTTAVIVAGK GI+VINKK
Sbjct:    1 MARQKNIFSVMAMVTVGASAFILPLKQPLNGPALCVQRAS-STARFAVSQDELKKQVGYKSVDDYVQSGMVVGLGTGSTAAFAVERLGMKLKA---------------------------------------------DPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINKK 236          
BLAST of NO08G03720 vs. NCBI_GenBank
Match: CBN78515.1 (Ribose-5-phosphate isomerase [Ectocarpus siliculosus])

HSP 1 Score: 355.1 bits (910), Expect = 2.000e-94
Identity = 184/233 (78.97%), Postives = 196/233 (84.12%), Query Frame = 0
Query:   49 SQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGQKLKAGELKDIVAIPTSIRTKEQAEGLGIPLVTLDTHSVLDVAIDGADEVDPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILGLPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTAPIADVMAVAGALEKVVGVVEHGFFLDMTTAVIVAGKTGIDVINK 282
            SQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLG+ LK+GELKDIVAIPTSIRTKEQAE L IPLVTLDTHSVLDVAIDGADEVDP LNLVKGRGGALLREKMVEVCAKKFIVIVDDSK VPGLG++GAMPVE+TPFC EHT  T+  LP +KG    KLR +  KPYVTDNDNYIVDLY+T PI D       + + VGVVEHG FLDM+ AVI AG  GI V  K
Sbjct:    3 SQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISGAMPVEVTPFCWEHTLNTVKNLPSIKG-CDAKLREEDGKPYVTDNDNYIVDLYFTDPIKDANQAGKEMLETVGVVEHGLFLDMSFAVISAGTDGITVKTK 234          
BLAST of NO08G03720 vs. NCBI_GenBank
Match: XP_002287305.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94748.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 328.2 bits (840), Expect = 2.600e-86
Identity = 179/269 (66.54%), Postives = 202/269 (75.09%), Query Frame = 0
Query:   18 ASAFILPVRQPLHGPALCTRRASTTTA-RFAVSQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGQKLKAGELKDIVAIPTSIRTKEQAEGLGIPLVTLDTHSVLDVAIDGADEVDPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILGLPGVKG-------AATGKLRMDGDKPYVTDNDNYIVDLYYTAPIADVMAVAGALEKVVGVVEHGFFLDMTTAVIVAGKTGIDV 279
            A+AF     Q +   A  T+R+  +T+ R A+SQDELKK VGYKSVDDYV SGMVVGLGTGSTA FAVERLG+KLK+GELKDIVAIPTS+RTKEQAE LGIPLVTLDTHS LDVAIDGADEVDP LNLVKG GGALLREKMVEVCA KFIVIVD+SK+  GLG    +PVEITPFCH HT  TI  LP   G        ++   + DGD+  VTDN NYIVDL++T PI D   +A  L+  VGVV+HG F  MTTAVI+AG  GI V
Sbjct:    5 AAAFAAVATQNVAAFAPMTQRSRVSTSIRMALSQDELKKMVGYKSVDDYVKSGMVVGLGTGSTAYFAVERLGEKLKSGELKDIVAIPTSVRTKEQAEELGIPLVTLDTHSKLDVAIDGADEVDPDLNLVKGGGGALLREKMVEVCADKFIVIVDESKLCDGLGPGFPLPVEITPFCHIHTLNTIAALPSCAGCKAVLRMGSSSTNKPDGDEIAVTDNGNYIVDLHFTEPIKDAPTMAKELKNTVGVVDHGLFCGMTTAVIIAGSDGISV 273          
BLAST of NO08G03720 vs. NCBI_GenBank
Match: EJK49799.1 (hypothetical protein THAOC_31290 [Thalassiosira oceanica])

HSP 1 Score: 326.6 bits (836), Expect = 7.400e-86
Identity = 176/256 (68.75%), Postives = 194/256 (75.78%), Query Frame = 0
Query:   28 PLHGPALCTRRASTTTARFAVSQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGQKLKAGELKDIVAIPTSIRTKEQAEGLGIPLVTLDTHSVLDVAIDGADEVDPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILGLPGVKG-------AATGKLRMDGDKPYVTDNDNYIVDLYYTAPIADVMAVAGALEKVVGVVEHGFFLDMTTAVIVAGKTGI 277
            P  G +     +S   A  A+SQDELKK VGYKSVDDYV SGMVVGLGTGSTA FAVERLGQKLK GELKDIVAIPTS+RTKEQAE LGIPLVTLDTHS LDVAIDGADEVDP LNLVKG GGALLREKMVEVCA KFIVIVD+SK+  GLG    +PVEITPFCHEHT RTI  LP  +G        ++   + DGD+  VTDN NYIVDL++   I D  A+A  L+  VGVV+HG F DMTTAVI+AG  GI
Sbjct:   22 PAAGVSRSRSISSLRMAETALSQDELKKMVGYKSVDDYVESGMVVGLGTGSTAYFAVERLGQKLKDGELKDIVAIPTSVRTKEQAESLGIPLVTLDTHSKLDVAIDGADEVDPDLNLVKGGGGALLREKMVEVCADKFIVIVDESKLCDGLGPGFPLPVEITPFCHEHTLRTIASLPTCEGCDAVLRMGSSSTNKPDGDEIAVTDNGNYIVDLHFKEAIKDAPAMASELKNTVGVVDHGLFCDMTTAVIIAGSDGI 277          
BLAST of NO08G03720 vs. NCBI_GenBank
Match: OLP85194.1 (putative ribose-5-phosphate isomerase 3, chloroplastic [Symbiodinium microadriaticum])

HSP 1 Score: 322.8 bits (826), Expect = 1.100e-84
Identity = 167/241 (69.29%), Postives = 190/241 (78.84%), Query Frame = 0
Query:   45 RFAVSQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGQKLKAGELKDIVAIPTSIRTKEQAEGLGIPLVTLDTHSVLDVAIDGADEVDPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILGLPGVKGAA-------TGKLRMDGDKPYVTDNDNYIVDLYYTAPIADVMAVAGALEKVVGVVEHGFFLDMTTAVIVAGKTGIDV 279
            R A+SQDELKK VGYK+VDDYV SG V+GLGTGSTAAFAVER+G+KLK+GELKDI+AIPTSIRT+EQAE LGIPL TLDTHS LDVAIDGADEVDPALNLVKG GGAL REK+VE+CAKKFIVIVD+SK+  GLG    +PVEI PFCHEHT R I  LP +KG             + DGD+P VTDN NYIVDL +T+PI+D +A    L+  VGVV+HG F  MTTA I+AGK GI V
Sbjct:  340 RKALSQDELKKMVGYKAVDDYVQSGTVIGLGTGSTAAFAVERVGEKLKSGELKDIIAIPTSIRTQEQAESLGIPLATLDTHSDLDVAIDGADEVDPALNLVKGGGGALFREKIVEMCAKKFIVIVDESKLCDGLGPGFPVPVEIVPFCHEHTMRKIASLPALKGCEPVLRLGDVANNQPDGDEPAVTDNGNYIVDLKFTSPISDPVAAGEQLKATVGVVDHGLFTSMTTACIIAGKEGIIV 580          
BLAST of NO08G03720 vs. NCBI_GenBank
Match: ABA55587.1 (chloroplast ribulose phosphate isomerase, partial [Pavlova lutheri])

HSP 1 Score: 320.5 bits (820), Expect = 5.300e-84
Identity = 172/253 (67.98%), Postives = 194/253 (76.68%), Query Frame = 0
Query:   37 RRASTTTARFAV--SQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGQKLKAGELKDIVAIPTSIRTKEQAEGLGIPLVTLDTHSVLDVAIDGADEVDPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILGLPGVKG---------AATGKLRMDGDKPYVTDNDNYIVDLYYTAPIADVMAVAGALEKVVGVVEHGFFLDMTTAVIVAGKTGIDV 279
            R A  T A+  V  +QDELKK  GYK+VDDYV SGMVVGLGTGSTAAFAVER+G KLK+GELKDI+AIPTS+RTKEQAE LGIPLVTL THS LDVAIDGAD VDP LNL+KG GGALLREKMVEVCAKKFIVIVDD+K+  GLG +  +PVEITPFC EHT R +   P   G         AATG  ++DG  P VTDNDNYIVDL++  PIAD +A+A  L+  VGVV+HG F  MTTA I+AGK GI V
Sbjct:   23 RSALRTPAQQVVMATQDELKKLAGYKAVDDYVRSGMVVGLGTGSTAAFAVERVGMKLKSGELKDIIAIPTSVRTKEQAEALGIPLVTLGTHSDLDVAIDGADAVDPRLNLIKGGGGALLREKMVEVCAKKFIVIVDDTKLCAGLGPSFPLPVEITPFCWEHTLRKVAACPAAAGCEAKLRLGSAATGS-KVDGTDPAVTDNDNYIVDLFFKQPIADPVALAAQLKATVGVVDHGLFCGMTTACIIAGKDGISV 274          
BLAST of NO08G03720 vs. NCBI_GenBank
Match: AAW79354.1 (chloroplast ribose-5-phosphate isomerase [Heterocapsa triquetra])

HSP 1 Score: 319.7 bits (818), Expect = 9.100e-84
Identity = 175/275 (63.64%), Postives = 193/275 (70.18%), Query Frame = 0
Query:   12 AMVTVGASAFILP-VRQPLHGPALCTRRASTTTARFAVSQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGQKLKAGELKDIVAIPTSIRTKEQAEGLGIPLVTLDTHSVLDVAIDGADEVDPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILGLPGVKGAA-------TGKLRMDGDKPYVTDNDNYIVDLYYTAPIADVMAVAGALEKVVGVVEHGFFLDMTTAVIVAGKTGIDV 279
            A    GAS    P VR  + G A  T  A         +QDELKKQVGYK+VDDYV SG V+GLGTGSTAAFAVER+GQ LK+GELKDI+AIPTSIRTKEQAE LGIPL TLDTHS LDVAIDGADEVDP LNLVKG GGAL REK+VE+CAKKFIVIVD+SKM  GLG    +PVEI PFCHEHT R I  LP + G             + DGDKP VTDN NYIVDL +  PI D +A    L+  VGVV+HG F  MTTA I+AG  GI V
Sbjct:   46 AAPAAGASQGFAPGVRCSILGVAAVTVAAGARRVARRATQDELKKQVGYKAVDDYVKSGTVIGLGTGSTAAFAVERVGQLLKSGELKDIIAIPTSIRTKEQAESLGIPLATLDTHSDLDVAIDGADEVDPNLNLVKGGGGALFREKIVEMCAKKFIVIVDESKMCGGLGPGFPIPVEIVPFCHEHTMREIAKLPALAGCKPVLRLGDVANNKPDGDKPAVTDNSNYIVDLVFETPIKDAVAAGEQLKNTVGVVDHGLFTGMTTACIIAGSDGISV 320          
BLAST of NO08G03720 vs. NCBI_GenBank
Match: GAX12595.1 (ribose 5-phosphate isomerase A [Fistulifera solaris])

HSP 1 Score: 319.3 bits (817), Expect = 1.200e-83
Identity = 168/253 (66.40%), Postives = 191/253 (75.49%), Query Frame = 0
Query:   38 RASTTTARFAVSQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGQKLKAGELKDIVAIPTSIRTKEQAEGLGIPLVTLDTHSVLDVAIDGADEVDPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILGLPGVKGAATGKLRM--------DGDKPYVTDNDNYIVDLYYTAPIADVMAVAGALEKVVGVVEHGFFLDMTTAVIVAGKTGIDVINKK 283
            R + +T   A SQ+ELKK VGYK+VDDYV SGMVVGLGTGSTA +AVER+G+KLK+GELKDI+AIPTS+RTKEQAE LGIPLVTLDTHS LDVAIDGADEVDP LNL KG GGAL REK+VEVCA KFIVIVD+SK+  GLG    +PVEI PFCHEHT R I  LP  KG     LR+        DGD+P VTDN NYIVDL++  PI D M +   ++ VVGVVEHG F  M+TAVI+AG  GI V   K
Sbjct:   24 RPTFSTRIMATSQEELKKLVGYKAVDDYVKSGMVVGLGTGSTAYYAVERVGEKLKSGELKDILAIPTSVRTKEQAESLGIPLVTLDTHSKLDVAIDGADEVDPELNLTKGGGGALFREKIVEVCADKFIVIVDESKLCDGLGPGFPIPVEIVPFCHEHTMRMIGDLPSCKGKCKPVLRLGSAANNKADGDEPAVTDNGNYIVDLHFEEPIKDPMTMGKEIKNVVGVVEHGLFCGMSTAVIIAGSDGISVKEAK 276          
BLAST of NO08G03720 vs. NCBI_GenBank
Match: GAX27838.1 (ribose 5-phosphate isomerase A [Fistulifera solaris])

HSP 1 Score: 318.9 bits (816), Expect = 1.600e-83
Identity = 168/253 (66.40%), Postives = 190/253 (75.10%), Query Frame = 0
Query:   38 RASTTTARFAVSQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGQKLKAGELKDIVAIPTSIRTKEQAEGLGIPLVTLDTHSVLDVAIDGADEVDPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILGLPGVKGAATGKLRM--------DGDKPYVTDNDNYIVDLYYTAPIADVMAVAGALEKVVGVVEHGFFLDMTTAVIVAGKTGIDVINKK 283
            R + +T   A SQDELKK VGYK+VDDYV SGMVVGLGTGSTA +AVER+G+KLK+GELKDI+AIPTS+RTKEQAE LGIPLVTLDTHS LDVAIDGADEVDP LNL KG GGAL REK+VEVCA KFIVIVD+SK+  GLG    +PVEI PFCHEHT R I  LP  KG     LR+        DGD+P VTDN NYIVDL++  PI D   +   ++ VVGVVEHG F  M+TAVI+AG  GI V   K
Sbjct:   24 RPTFSTRIMATSQDELKKLVGYKAVDDYVKSGMVVGLGTGSTAYYAVERVGEKLKSGELKDILAIPTSVRTKEQAESLGIPLVTLDTHSKLDVAIDGADEVDPELNLTKGGGGALFREKIVEVCADKFIVIVDESKLCDGLGPGFPIPVEIVPFCHEHTMRMIGNLPSCKGKCKPVLRLGSAANNKVDGDEPAVTDNGNYIVDLHFEEPIKDPTTMGKEIKNVVGVVEHGLFCGMSTAVIIAGSDGISVKEAK 276          
The following BLAST results are available for this feature:
BLAST of NO08G03720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854001.12.600e-13992.20ribose 5-phosphate isomerase A [Nannochloropsis ga... [more]
EWM26792.11.100e-10877.30ribose-5-phosphate isomerase [Nannochloropsis gadi... [more]
CBN78515.12.000e-9478.97Ribose-5-phosphate isomerase [Ectocarpus siliculos... [more]
XP_002287305.12.600e-8666.54predicted protein [Thalassiosira pseudonana CCMP13... [more]
EJK49799.17.400e-8668.75hypothetical protein THAOC_31290 [Thalassiosira oc... [more]
OLP85194.11.100e-8469.29putative ribose-5-phosphate isomerase 3, chloropla... [more]
ABA55587.15.300e-8467.98chloroplast ribulose phosphate isomerase, partial ... [more]
AAW79354.19.100e-8463.64chloroplast ribose-5-phosphate isomerase [Heteroca... [more]
GAX12595.11.200e-8366.40ribose 5-phosphate isomerase A [Fistulifera solari... [more]
GAX27838.11.600e-8366.40ribose 5-phosphate isomerase A [Fistulifera solari... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008634NSK008634Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G03720.1NO08G03720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583127gene_3706Nannochloropsis oceanica (N. oceanica CCMP1779)gene
RPIgene3701Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G03720.1NO08G03720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G03720 ID=NO08G03720|Name=NO08G03720|organism=Nannochloropsis oceanica|type=gene|length=1836bp
AGAAGCATCCTGCGCGCAAGGATTGGATCCAAAACTAACGGGCTTGGACC
CCTCTTTGTGCGGCGGCTTGTTTATGTTTGTGTGATGCCTTGTGTAGTGC
GGGTGAGAAAAAGCATGCCCGAACCGCAAACGTGGATATGGATTTGATGT
TTACCATCAACTCATCCCCGGGTCACACATCTCTCACCTTCCGCTTCTCT
CCTTCCCTCACCACCTCAACAAAACCCTATGGCTAGTCCTTCACCCTACA
CATAAAAATGAGCCGCCAAAAGACTCTCTTTTCTGTCATGGCCATGGTCA
CCGTGGGTGCCTCTGCGTTTATCCTTCCTGTCCGCCAGCCCCTGCACGGC
CCGGCTCTGTGCACTCGCCGTGCCTCGACCACCACCGCGCGCTTCGCCGT
GAGCCAAGACGAGCTCAAGAAGCAAGTGGGCTACAAGTCCGTGGATGACT
ACGTGACCAGCGGCATGGTCGTGGGCCTGGGCACCGGTTCCACTGCCGCC
TTTGCTGgtatgtgcgtgcggagggcatgggttgtggggacggtggagtg
cagggaggtcatacgtcaaggttcctcggatcaaacttcctaccctagcc
ccagcccctattgaaagcttctgctttcccttacttgtacatttttcctt
tacccatattgatgatggtgttcagttgtgatgataaacacccgaacaat
aagcacccttctcatttcgccctttttccctccccccagTGGAGCGCCTC
GGGCAGAAGCTCAAGGCTGGCGAGCTTAAGGACATCGTTGCCATCCCTAC
TTCCATCCGCACCAAGGAGCAAGCGGAAGGCCTGGGAATCCCCCTGGTGA
CGCTTGACACTCACTCTGTGTTGGATGTGGCCATTGACGGTGCCGATGAG
GTGGACCCGGCTCTGAACTTGGTGAAGGGACGAGGGGGTGCTTTGCTGCG
TGAGAAGATGGTGGAGgtacgtgtgccaggaaggagaggaagggtagagg
ggaggagcgaggagaattgtaaaaatgtgtactacgcgtcattctcttat
gacatgagacgaccaacctgacctctgcctttctccctcccatctttcct
cccttcctcccttcttccctcctaaaagGTGTGCGCTAAGAAGTTCATCG
TCATTGTGGACGACAGCAAGATGGTGCCTGGCCTGGGAGTCACTGGTGCG
ATGCCCGTGGAGATCACCCCCTTCTGCCATGAGCACACTCAACGGACGAT
CCTAGGCTTGCCAGGGGTGAAGGGCGCGGCGACGGGGAAGCTTCGCATGG
ATGGAGACAAGCCCTACGTGACTGACAATGACAACTACATCGTGGATTTG
TACTACACCGCGCCAATTGCGGACGTGATGGCCGTTGCGGGGGCGCTGGA
GAAGGTGGTAGGTGTGGTGGAGCACGGTTTTTTCTTAGACATGACCACGG
CGGTGATCGTGGCTGGGAAGACGGGCATCGACGTCATCAATAAGAAGTAG
AGGAGAGAGGAAAGAGGGACTATGTGGAGGTGTTTGCCTGCACGCATGTT
GACCCGCAGCCGCTTGGAGGCTTAAGCAAGGCATGGAGGGGAGGGATGGG
GGAGTGCGAAAGGAGAGGCGCGTTTTTGGGATTGGAAGGAAGAGTGAGAG
AGTGGACTGCTCGACCTCACTGCACACAAATGAGGGAGGGGGGAGGGAGG
GAGGGAGGAAGGAAGGGAAGGACACAGTCCTTGCTCAGACACATGACAGA
GCCCCCCCAAAAGAAGGAAGGAGCAGATAAATCGGTATGTCAGTCGTGCA
GCCCTGAGAAAGCCGACGCCCTTTCTATTTACACGA
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protein sequence of NO08G03720.1

>NO08G03720.1-protein ID=NO08G03720.1-protein|Name=NO08G03720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=283bp
MSRQKTLFSVMAMVTVGASAFILPVRQPLHGPALCTRRASTTTARFAVSQ
DELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGQKLKAGELKDIV
AIPTSIRTKEQAEGLGIPLVTLDTHSVLDVAIDGADEVDPALNLVKGRGG
ALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTI
LGLPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTAPIADVMAVAGALE
KVVGVVEHGFFLDMTTAVIVAGKTGIDVINKK*
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Synonyms
Publications