NO08G03490, NO08G03490 (gene) Nannochloropsis oceanica

Overview
NameNO08G03490
Unique NameNO08G03490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1477
Alignment locationchr8:972635..974111 -

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Properties
Property NameValue
DescriptionProhibitin
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:972635..974111 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR036013Band_7/SPFH_dom_sf
IPR001107Band_7
IPR000163Prohibitin
Homology
BLAST of NO08G03490 vs. NCBI_GenBank
Match: EWM26807.1 (Prohibitin [Nannochloropsis gaditana])

HSP 1 Score: 457.2 bits (1175), Expect = 4.100e-125
Identity = 293/313 (93.61%), Postives = 304/313 (97.12%), Query Frame = 0
Query:    1 MNAAKKFAENLGSKIPKGAGMXXXXXXXXXXXXXXXXXXXXXXXXXXGLGVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEKGAKRR 314
            MNAAKKFAENLGSKIPKGAGMXXXXXXXXXXXXXXXXXXXXXXXXXX      YAGYNSFYTVEGGHRALLFNRL+GVKEEVY+EGMH MIPWF+MP+IYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPD++QLRWIFRTLG+DYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVS+QIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVS+SGQKVYLSADSLLLNMY+GDEEK  K+R
Sbjct:    1 MNAAKKFAENLGSKIPKGAGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNMYSGDEEKSGKKR 313          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_005854286.1 (hypothetical protein NGA_0190001 [Nannochloropsis gaditana CCMP526] >EKU22077.1 hypothetical protein NGA_0190001 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 430.6 bits (1106), Expect = 4.100e-117
Identity = 247/266 (92.86%), Postives = 260/266 (97.74%), Query Frame = 0
Query:   48 GLGVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEKGAKRR 314
            G+  + YAGYNSFYTVEGGHRALLFNRL+GVKEEVY+EGMH MIPWF+MP+IYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPD++QLRWIFRTLG+DYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVS+QIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVS+SGQKVYLSADSLLLNMY+GDEEK  K+R
Sbjct:   12 GVTGILYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNMYSGDEEKSGKKR 277          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_009033207.1 (hypothetical protein AURANDRAFT_59857 [Aureococcus anophagefferens] >EGB12121.1 hypothetical protein AURANDRAFT_59857 [Aureococcus anophagefferens])

HSP 1 Score: 299.7 bits (766), Expect = 1.100e-77
Identity = 156/269 (57.99%), Postives = 199/269 (73.98%), Query Frame = 0
Query:   48 GLGVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGD---EEKGAKRR 314
            G+  V + GYNS +TV+GG RA+L++R+ GVK+ VY EGMH  +P  E PV +D+R +PR +QSLTGSKD+QMVNIT+RVLSKP+ S+L WI++ LG DYD+RVLPSIVNEV+KAVVA YNA+ELLTKRE VS++IR +L  RA +FRI+LDDVSITHL+FS EYT AVEAKQVAQQ++ER                        SA L+GKAI+ NP F+KLRKID A++IA  V+ S  KVYL+ADSLL+N+   +   E+  AK+R
Sbjct:   44 GISAVGFLGYNSVFTVQGGQRAVLWSRISGVKDAVYAEGMHPRVPLIEYPVPFDVRTRPRNVQSLTGSKDLQMVNITLRVLSKPNTSELAWIYKRLGHDYDDRVLPSIVNEVTKAVVACYNASELLTKREQVSNEIRHRLVVRAADFRIILDDVSITHLSFSHEYTAAVEAKQVAQQDSERARYIVEKAIQEKKSIIVKAEGEAQSARLIGKAIQNNPGFVKLRKIDTAKEIAGTVARSQGKVYLNADSLLINILGNEQLGEDTSAKKR 312          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: GAX20499.1 (hypothetical protein FisN_24Hu251 [Fistulifera solaris])

HSP 1 Score: 298.5 bits (763), Expect = 2.400e-77
Identity = 150/258 (58.14%), Postives = 195/258 (75.58%), Query Frame = 0
Query:   51 VVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEK 309
            V++Y  YNS YTV+GGHRA++FNR +G+K+ VY EG++  IPWFE PVI+DIR +P  +Q+LTGS D+QMV I IRVL KPD ++L WI+R LG++YDERVLPSI+NE +KAVVA+YNA ELLTKR+ VS +I L L+KRA  F I+L+DV+ITHL FS EY  AVEAKQVAQQ+AER                        SA L+G+A+R+NP F+KLR+IDAARDIA++V++SG K+YL+AD+LLLN+    +EK
Sbjct:   50 VLSYGAYNSVYTVQGGHRAVVFNRFVGMKDTVYGEGLNFNIPWFEHPVIFDIRTRPVNLQTLTGSMDLQMVTIAIRVLHKPDPNKLVWIYRFLGENYDERVLPSIMNECAKAVVARYNANELLTKRDEVSREISLDLQKRAANFNIILEDVAITHLAFSPEYAKAVEAKQVAQQDAERGKYIVMGAQQEKKTIITKARGEAESAELIGQAVRKNPGFMKLRRIDAARDIADIVASSGNKIYLNADTLLLNLLKDKDEK 307          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: GAX13506.1 (hypothetical protein FisN_27Lu002 [Fistulifera solaris])

HSP 1 Score: 298.5 bits (763), Expect = 2.400e-77
Identity = 149/258 (57.75%), Postives = 195/258 (75.58%), Query Frame = 0
Query:   51 VVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEK 309
            V++Y  YNS YTV+GGHRA++FNR +G+K+ VY EG++  IPWFE PVI+DIR +P  +Q+LTGS D+QMV I IRVL KPD ++L WI+R LG++YDERVLPS++NE +KAVVA+YNA ELLTKR+ VS +I L L+KRA  F I+L+DV+ITHL FS EY  AVEAKQVAQQ+AER                        SA L+G+A+R+NP F+KLR+IDAARDIA++V++SG K+YL+AD+LLLN+    +EK
Sbjct:   35 VLSYGAYNSVYTVQGGHRAVVFNRFVGMKDTVYGEGLNFNIPWFEHPVIFDIRTRPVNLQTLTGSMDLQMVTIAIRVLHKPDPNKLVWIYRFLGENYDERVLPSVMNECAKAVVARYNANELLTKRDEVSREISLDLQKRASNFNIILEDVAITHLAFSPEYAKAVEAKQVAQQDAERGKYIVMGAQQEKKTIITKARGEAESAELIGQAVRKNPGFMKLRRIDAARDIADIVASSGNKIYLNADTLLLNLLKDKDEK 292          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: OEU16482.1 (prohibitin 2 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 293.9 bits (751), Expect = 5.900e-76
Identity = 147/262 (56.11%), Postives = 194/262 (74.05%), Query Frame = 0
Query:   50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEKGAK 312
            G +AY  YNS YTV GGHRA++FNR+ G+K+ VY EG++  IPWFE P+IYDIR +P  +Q+LTGSKD+QMV I +RVL KP+ ++L WI++TLG +YDER+LPS++NE +KA+VA+YNA ELLTKR++VS  I   L++RA +F IVLDDV+ITHL+FS EY  AVEAKQVAQQ+AE+                        SA L+G A+++NP F+KLR+ID ARDIA++V+ SG KVYL+ADSLLLN+    +EK  K
Sbjct:   46 GGLAYGTYNSIYTVPGGHRAVMFNRVTGMKDSVYGEGLNFNIPWFERPIIYDIRTRPVNLQTLTGSKDLQMVTIAVRVLHKPNPNKLVWIYQTLGMNYDERILPSVMNESAKAIVARYNANELLTKRDLVSRAISEDLQRRASQFNIVLDDVAITHLSFSPEYARAVEAKQVAQQDAEKAKYVVLGAQQEKKTIITRARGEAESAELIGLAVKKNPGFMKLRRIDVARDIADIVAKSGNKVYLNADSLLLNLVGDADEKFEK 307          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: CEO94790.1 (hypothetical protein PBRA_003603 [Plasmodiophora brassicae])

HSP 1 Score: 291.6 bits (745), Expect = 2.900e-75
Identity = 143/254 (56.30%), Postives = 188/254 (74.02%), Query Frame = 0
Query:   48 GLGVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNM 302
            G G +AY GYNS +T  GGHRA+++NR++GVK+ VY EGMH MIPWFE P I+D+R KP+ I S TG++DMQMVNI++RVL KPD SQL  IFR  G DYD+R+LPSIVNE  KAV+A+YNA++L+TKRE +S +IR  L++RAK+F I+LDDVSITHL+F  EYT AVE+KQVAQQEAER                        SA ++GKA+  NP F++LR+++AA+ I+  +S+S  KVYL+A+ LLLN+
Sbjct:   27 GAGAIAYGGYNSLFTCPGGHRAVMYNRVVGVKDAVYPEGMHFMIPWFETPTIFDVRTKPKKISSPTGTRDMQMVNISLRVLYKPDISQLPTIFRRFGSDYDDRILPSIVNETLKAVIAQYNASQLITKREQISREIRNHLQERAKDFYILLDDVSITHLSFGSEYTAAVESKQVAQQEAERAKFIVERALQDKRSNIIHAEGEAQSAEMIGKALARNPGFVELRRMEAAKKISGALSSSPNKVYLNAEGLLLNL 280          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_002180691.1 (prohibitin-like protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC48099.1 prohibitin-like protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 290.8 bits (743), Expect = 5.000e-75
Identity = 149/244 (61.07%), Postives = 186/244 (76.23%), Query Frame = 0
Query:   58 NSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNM 302
            NS YTV+GGHRA++FNRL+G+KE VY EG++  IPW E P+IYDIR +P  +Q+LTGSKD+QMV I IRVL KP+ +QL WI+R LG +YDERVLPSI+NE +KAVVA+YNA ELLTKR++VS +I   LEKRA+ F I L+DV+ITHL FS EY  AVEAKQVAQQ+AER                        SA L+G A+R+NP F+KLR+IDAARDIA++V++SG KVYL+ADSLLLN+
Sbjct:    1 NSVYTVQGGHRAVVFNRLVGMKETVYGEGLNFNIPWLERPIIYDIRTRPVNLQTLTGSKDLQMVTIAIRVLHKPNPNQLVWIYRMLGINYDERVLPSIMNECAKAVVARYNANELLTKRDVVSKEISFDLEKRARIFNIQLEDVAITHLAFSPEYARAVEAKQVAQQDAERAKYIVLGAQQEKKTIITKARGEAESAELIGTAVRQNPGFMKLRRIDAARDIADIVASSGNKVYLNADSLLLNL 244          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: EJK74458.1 (hypothetical protein THAOC_03860 [Thalassiosira oceanica])

HSP 1 Score: 290.4 bits (742), Expect = 6.600e-75
Identity = 144/262 (54.96%), Postives = 191/262 (72.90%), Query Frame = 0
Query:   50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEKGAK 312
            G + Y  YNS +TV+GGHRA+++NR++G+K+ VY EG++  +PWFE PV+YDIR +P  +Q+LTGSKD+QMV + +RVL KPD SQL W++R LGK+YDER+LPS++NE +KAVVA+YNA ELLTKRE VS+ I  +L  R   F ++L+DV+ITHL FS EY  AVEAKQVAQQEAER                        SA L+G A++ NP F+KLR+IDAA+DIA++VS SG ++YL+ADSLLLN+    +EK  K
Sbjct:   49 GGLGYGAYNSVFTVDGGHRAVVYNRIIGMKDVVYGEGLNFNVPWFERPVVYDIRTRPVNLQTLTGSKDLQMVTMGVRVLHKPDPSQLVWMYRHLGKNYDERILPSLMNECAKAVVARYNANELLTKREEVSASISRELSARCAGFHVLLEDVAITHLAFSPEYAKAVEAKQVAQQEAERAKYIVLGAVQEKKTIITRARGEAESAELIGTAVKRNPGFMKLRRIDAAKDIADIVSGSGNRIYLNADSLLLNLLGDADEKFTK 310          
BLAST of NO08G03490 vs. NCBI_GenBank
Match: XP_004360579.1 (prohibitin [Cavenderia fasciculata] >EGG22728.1 prohibitin [Cavenderia fasciculata])

HSP 1 Score: 288.1 bits (736), Expect = 3.300e-74
Identity = 147/262 (56.11%), Postives = 188/262 (71.76%), Query Frame = 0
Query:   50 GVVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERXXXXXXXXXXXXXXXXXXXXXXXXSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLNMYTGDEEKGAK 312
            GV     YNS   VEGGHRA++FNR +G+K++VY EG H ++PWFE P IYD+R KPR I SLTGSKD+QMVNITIRVLSKP  + L  I+R+LGKDYDERVLPSIVNEV K+VVA++NA++L+T+RE VS  I  +L  RA++F I LDDVSITHL F +EY  A+E+KQVAQQ+AER                        SA L+  +I++NPAF++LRKI+AARDIA V+S S  KV++ +++LLLN+   DE   AK
Sbjct:   30 GVALVGAYNSLLNVEGGHRAIVFNRFVGIKQKVYTEGTHFIVPWFERPEIYDVRAKPRNIASLTGSKDLQMVNITIRVLSKPSVAHLPTIYRSLGKDYDERVLPSIVNEVLKSVVAQFNASQLITQREQVSRLIYKRLSDRARDFHIELDDVSITHLNFGKEYAAAIESKQVAQQDAERARFMVEKAQQDKRSIIVKAEGESQSAKLISDSIKQNPAFLQLRKIEAARDIAQVISKSQNKVFVDSENLLLNLNFSDEAPPAK 291          
The following BLAST results are available for this feature:
BLAST of NO08G03490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26807.14.100e-12593.61Prohibitin [Nannochloropsis gaditana][more]
XP_005854286.14.100e-11792.86hypothetical protein NGA_0190001 [Nannochloropsis ... [more]
XP_009033207.11.100e-7757.99hypothetical protein AURANDRAFT_59857 [Aureococcus... [more]
GAX20499.12.400e-7758.14hypothetical protein FisN_24Hu251 [Fistulifera sol... [more]
GAX13506.12.400e-7757.75hypothetical protein FisN_27Lu002 [Fistulifera sol... [more]
OEU16482.15.900e-7656.11prohibitin 2 [Fragilariopsis cylindrus CCMP1102][more]
CEO94790.12.900e-7556.30hypothetical protein PBRA_003603 [Plasmodiophora b... [more]
XP_002180691.15.000e-7561.07prohibitin-like protein, partial [Phaeodactylum tr... [more]
EJK74458.16.600e-7554.96hypothetical protein THAOC_03860 [Thalassiosira oc... [more]
XP_004360579.13.300e-7456.11prohibitin [Cavenderia fasciculata] >EGG22728.1 pr... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008662NSK008662Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G03490.1NO08G03490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583027gene_3683Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100018g43gene3717Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G03490.1NO08G03490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G03490 ID=NO08G03490|Name=NO08G03490|organism=Nannochloropsis oceanica|type=gene|length=1477bp
ATGAACGCGGCGAAGAAGTTCGCGGAGAACCTAGGCAGCAAGATTCCAAA
GGgtatgtgttatggatggggtggagtgagtggatggatgcatgctggct
gaggacaagactgaggaagggatgcggcctcatcgcttacaatgtatgct
atgcatcgcaaaatctcacttatacacaaccgacaattaaaaaacagGGG
CAGGCATGGGTGGGGGAGGTGGTGGCGGTGGTGGAAGTGGAGGACCGGCA
GGTATCAGTCCGGCGGGGCCGATTGGGGCTTTACTGGGGTTGGGAGTGGT
GGCGTACGCGGGCTACAACAGTTTTTACACTGTGGAGGGTGGGCACCGTG
CACTGTTGTTCAACAGACTACTGGGTGTGAAGGAGGAAGTTTATATTGAG
GGCATGCACATCATGATCCCTTGGTTTGAGATGCCCGTGATTTATGACAT
CAGACCTAAGCCGCGGATGATTCAGTCCTTGACGGGCAGCAAAGgtaagg
gaaggacatggggacagaagggaggccgagctagagagacgtaagaatga
gaccctctccgatatgtcatttgctttcgcgcttgaacaatgcttgaccc
ctccagtggttgatgacttttcctccaccccttcctccctccctccctac
ttccatcccttcagACATGCAAATGGTGAACATCACCATCCGTGTGCTCT
CCAAGCCTGACGCTTCCCAGCTCCGATGGATCTTTCGTACCCTTGGCAAG
GACTATGATGAGCGCGTCCTGCCTTCGATCGTCAACGAGGTGTCAAAGGC
AGTGGTTGCTAAGTACAATGCCGCCGAGCTGCTAACGAAGCGAGAGATGG
TCTCATCTCAAATTCGATTGCAGTTGGAAAAGCGGGCGAAAGAGTTCCGG
ATCGTGTTGGACGATGTATCTATCACGCACTTGACTTTCTCGAGGGAGTA
TACCAATGCCGTGGAGGCGAAGCAAGTCGgtacgtgggtgtgaaggaggg
agggagggaagcagatagggagtgagggaaaggacgttaggacgcccgtg
gccggctaccatttagttacgtgaaaatcactaactgctgctttttgctc
attcattctttcacctcaatgcatacctgtattcaatcaatcaccaatta
tccttctctcatccccttcttcctcccttccctccctccccctctacagC
GCAACAGGAGGCCGAACGCGCCAAGTATGTGGTGATGAAGGCGAACCAGG
AGAAGGAAGCTATCATCATTAAGGCCGAAGGTGAGGCTCAATCTGCAGCC
CTGGTCGGGAAGGCCATCCGTGAGAACCCTGCGTTTATCAAGCTCCGCAA
AATTGATGCGGCGAGGGACATTGCGAATGTAGTGTCGGCGTCCGGACAGA
AGGTGTACCTTTCGGCAGACTCATTGTTGTTGAACATGTACACCGGGGAT
GAGGAGAAGGGGGCTAAGAGGCGGTAG
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protein sequence of NO08G03490.1

>NO08G03490.1-protein ID=NO08G03490.1-protein|Name=NO08G03490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=314bp
MNAAKKFAENLGSKIPKGAGMGGGGGGGGGSGGPAGISPAGPIGALLGLG
VVAYAGYNSFYTVEGGHRALLFNRLLGVKEEVYIEGMHIMIPWFEMPVIY
DIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDASQLRWIFRTLGKDYDER
VLPSIVNEVSKAVVAKYNAAELLTKREMVSSQIRLQLEKRAKEFRIVLDD
VSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGE
AQSAALVGKAIRENPAFIKLRKIDAARDIANVVSASGQKVYLSADSLLLN
MYTGDEEKGAKRR*
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Synonyms
Publications