NO08G03460, NO08G03460 (gene) Nannochloropsis oceanica

Overview
NameNO08G03460
Unique NameNO08G03460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3140
Alignment locationchr8:963669..966808 -

Link to JBrowse

Properties
Property NameValue
DescriptionSH2 domain protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:963669..966808 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: INTERPRO
TermDefinition
IPR036860SH2_dom_sf
IPR027417P-loop_NTPase
IPR000980SH2
IPR001806Small_GTPase
Homology
BLAST of NO08G03460 vs. NCBI_GenBank
Match: EWM26795.1 (SH2 domain protein [Nannochloropsis gaditana])

HSP 1 Score: 192.2 bits (487), Expect = 7.400e-45
Identity = 265/609 (43.51%), Postives = 307/609 (50.41%), Query Frame = 0
Query:  351 RRVISCYQPLQGWLPSVDLEVLFDKSPATSATI---QNXXXXXXXXXXXXXXXXXXXXXXXXXSSYKPDAGWRHLAGCLGRNEAESLLRPRPVGTFLLRRFDERSLRLSYRTQHSVEHAPIIFTSEGRWTHIRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAPNTPRGSSSRNGGRERISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVQKAQLVGHQLQLQAPFPLVPPSIRPKTILRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQSFETLDELLKFFSKKAMHGLCFRRVPWTCEYEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPFVTVPTVEQVDGVFKDLNRVLKEVWMYDEKEKKTRSKSGGRRRVVLGEYKREGEGVQRAVEDEEVEQGALLGLCGHSHGRVLVALGLDSDAIESDGCSKGKEEEDKNEFMPGMSSVDLVESIIALDIKFCELLRSINTLLFVAGASCPSFTSTASQSSPXXXXXXXXADVLSHEKAEIQKKAYLQALRALGQWRPLLETLRLRFEAE 957
            R  ++ YQP +GWLPS DL VLF +SPA S T+   Q         XXXXXXXXXXXXXXXXX       GWRHLAG +GR  AE LLR +P GTFLLRR+DERSLRLSYRT+  VEHAP++FT EGRW H+R                         XXXXXXXXXX + P+T      R         XXXXXXXXXXXXXXXXXXXXXXXXXXXX         + +AQ  GH  QL APFP VP SIRP    R                       XXXXXXXXXXPQSF +L+ELL FF +KA HGLCFRRVP TC+YE                      XXXXXXXXXXX                                         +    T P+  +V  VFK L+ VL  V   D  E++ R     R R         G G      +EE +Q +LL LC  S   VL ALGL +    S    +G   ++       M    LVE I+ LD+K  +LL +IN LL VA +              XXXXXXXX           QK A L+ALR LG+WRPLL+TLRLRF+ E
Sbjct:   41 RVALASYQPPRGWLPSEDLAVLFGRSPAASVTLGVFQRQQLDRRREXXXXXXXXXXXXXXXXXXXXXXXXGWRHLAGSMGREAAERLLRAKPPGTFLLRRYDERSLRLSYRTRTGVEHAPLVFTREGRWAHVR-------------RVSTAGVASPGAXXXXXXXXXXFSPPSTAPXXXLRG--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLPVSTHALFQAQAFGH--QLHAPFPSVPLSIRPAR--RMGRGSIGRSEGPLTSPFQPPPQSXXXXXXXXXXPQSFASLEELLSFFRRKAAHGLCFRRVPGTCDYE-ELSEGGDGRRKTGPWLGEQEGXXXXXXXXXXXRVLLGWFQRRISQPGTASAEGRGGPSKQEGGRKGKAQAQGGTCTEDTFPSSVEVVEVFKSLHEVLAAVGRRDGAERQGRGGVEARER-------EAGLGT-----EEEEDQMSLLRLCDQSAEPVLAALGLKT---VSPAPEEGPWRQEHGREGEAMDLAALVEKIVLLDMKIFQLLSTINRLLLVATSXXXXXXXXXXXXXXXXXXXXXXXXXXXG-----QKTACLEALRVLGRWRPLLKTLRLRFQTE 603          
BLAST of NO08G03460 vs. NCBI_GenBank
Match: CBJ48935.1 (RABSH2, a protein conserved in some stramenopiles (also in oomycetes), characterised by a combinatio [Ectocarpus siliculosus])

HSP 1 Score: 130.2 bits (326), Expect = 3.500e-26
Identity = 84/229 (36.68%), Postives = 109/229 (47.60%), Query Frame = 0
Query:   10 EVTEKILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASHHALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYVPAHVPRVLLAHKADLVNEAGCCVNDKLLEAY-KRAAGLTDWCWTVGHEYFGDY-VANR--------------------SNKSRPVADAVQLLVDHILLFRREGGGEEG 217
            E+  K+L+VG    GKTS +RR  DK      YV T+G DV V P             G    RPV LH WDV+  +L A   HH LI     G+  V+DV++RESL AVD W   L+++ P    ++L+ HKADL       VND+ L  Y   A+G   WC TVG   +GDY VA R                      K   V++AV+ L+ H+    R GG   G
Sbjct:    9 ELVLKVLLVGAPKAGKTSLVRRMCDKAFRE-DYVQTLGFDVTVVPY------------GTYQGRPVKLHLWDVAGSQLTAQPCHHGLIGQGAEGVLYVMDVTSRESLQAVDDWDQALSKFYPPWTCKLLVGHKADL---PAYVVNDEALSLYVAGASGFRGWCLTVGSSEYGDYDVAARRGGGSGATAHGARHKGQSLSGEKQLSVSEAVRTLLGHVF---RSGGAARG 218          
BLAST of NO08G03460 vs. NCBI_GenBank
Match: XP_009524750.1 (hypothetical protein PHYSODRAFT_489080 [Phytophthora sojae] >EGZ22033.1 hypothetical protein PHYSODRAFT_489080 [Phytophthora sojae])

HSP 1 Score: 129.8 bits (325), Expect = 4.500e-26
Identity = 78/193 (40.41%), Postives = 113/193 (58.55%), Query Frame = 0
Query:   14 KILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASH-HALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205
            KI +VGGAAVGKTS +RR++ +      Y PTIGVDV          T ++        + + LH WDVS  E+ ASAS  H+L+C ++ GIF V +V    S+AA+D W+H L++Y+ P  VP  L++HKADL+ +     +D  + AY RAAG   W WTVG   FG+     + K+  V +A++ +V+ I
Sbjct:   57 KIALVGGAAVGKTSIVRRWLQRSYPA-TYSPTIGVDV-------SSMTYKH------RGQELLLHVWDVSSAEVDASASSLHSLLCEDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYLSPKEVPCFLISHKADLLQKRVMTSDD--IAAYARAAGYKGWMWTVGKPNFGE-----NEKNPAVREALERMVEFI 228          
BLAST of NO08G03460 vs. NCBI_GenBank
Match: XP_008868874.1 (hypothetical protein H310_05820 [Aphanomyces invadans] >ETW02269.1 hypothetical protein H310_05820 [Aphanomyces invadans])

HSP 1 Score: 124.8 bits (312), Expect = 1.500e-24
Identity = 74/196 (37.76%), Postives = 109/196 (55.61%), Query Frame = 0
Query:   10 EVTEKILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASHHALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205
            E+  K+ IVGG  VGK+S +RR++ +P     Y PTIGVDV          T +    G     P+++  WDVS  E V S + H L+CT + GIF V +V    S+AAVDAWQ  L +++  + +P  LL+HKAD++ +     +D  ++AY R AG   W WTVG    G+     S+K+  V +A+  ++D I
Sbjct:   44 ELHMKVAIVGGNGVGKSSIVRRWLKRPYQS-AYHPTIGVDV---------HTIKYSKRGASKDSPIYVDVWDVSCAE-VNSPAFHELLCTGLDGIFFVFNVHRVSSIAAVDAWQTALGKFISSSEIPFYLLSHKADMLQKRVMTSDD--IDAYVRTAGFKGWSWTVGRAGLGE-----SDKNPAVLEALDTMIDLI 221          
BLAST of NO08G03460 vs. NCBI_GenBank
Match: XP_008868875.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW02270.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 124.8 bits (312), Expect = 1.500e-24
Identity = 74/196 (37.76%), Postives = 109/196 (55.61%), Query Frame = 0
Query:   10 EVTEKILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASHHALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205
            E+  K+ IVGG  VGK+S +RR++ +P     Y PTIGVDV          T +    G     P+++  WDVS  E V S + H L+CT + GIF V +V    S+AAVDAWQ  L +++  + +P  LL+HKAD++ +     +D  ++AY R AG   W WTVG    G+     S+K+  V +A+  ++D I
Sbjct:   44 ELHMKVAIVGGNGVGKSSIVRRWLKRPYQS-AYHPTIGVDV---------HTIKYSKRGASKDSPIYVDVWDVSCAE-VNSPAFHELLCTGLDGIFFVFNVHRVSSIAAVDAWQTALGKFISSSEIPFYLLSHKADMLQKRVMTSDD--IDAYVRTAGFKGWSWTVGRAGLGE-----SDKNPAVLEALDTMIDLI 221          
BLAST of NO08G03460 vs. NCBI_GenBank
Match: OWZ18422.1 (hypothetical protein PHMEG_0007490 [Phytophthora megakarya])

HSP 1 Score: 124.8 bits (312), Expect = 1.500e-24
Identity = 74/193 (38.34%), Postives = 110/193 (56.99%), Query Frame = 0
Query:   14 KILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASH-HALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205
            KI +VGG+AVGKTS +RR++ +      Y PTIGVDV             +    +   + + L  WDVS  E+ ASAS  HAL+C ++ GIF V +V    S+AA+D W+H L++Y+ P  +P  L++HKADL+ +     +D  + AY RA G   W WTVG   FG+     + K+  V +A++ +V+ I
Sbjct:   55 KIALVGGSAVGKTSIVRRWLQRSYP-TTYSPTIGVDV-------------STMTYNHRGQELLLQLWDVSSAEVDASASSLHALLCDDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYMSPKEIPCFLISHKADLLQKRVMTSDD--IAAYARAGGYKGWMWTVGKANFGE-----NEKNPAVREALERMVEFI 226          
BLAST of NO08G03460 vs. NCBI_GenBank
Match: XP_024581186.1 (ras family protein [Plasmopara halstedii] >CEG44817.1 ras family protein [Plasmopara halstedii])

HSP 1 Score: 124.0 bits (310), Expect = 2.500e-24
Identity = 74/194 (38.14%), Postives = 113/194 (58.25%), Query Frame = 0
Query:   14 KILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASH-HALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRP-VADAVQLLVDHI 205
            KI +VGG+AVGKTS +RR++ +    + Y+PT+GVD  VY +             +   + + L  WDVS  E+ ASAS  H+L+C ++ GIF V +V    S+AA+D W+H L++Y+ P   P  L++HKADL+ +     +D  + AY + AG   W WTVG   FG+      N+ RP V +A++ ++D I
Sbjct:   80 KIALVGGSAVGKTSIVRRWLQRSYP-VTYLPTVGVD--VYSMKY-----------EHRGKELLLSIWDVSSAEVDASASSLHSLLCEDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYLSPKETPCFLISHKADLLQKRVITSDD--IAAYAKTAGYRGWMWTVGKATFGE------NEKRPAVREALERMIDFI 251          
BLAST of NO08G03460 vs. NCBI_GenBank
Match: GAX94985.1 (Hypothetical protein PINS_002874 [Pythium insidiosum])

HSP 1 Score: 124.0 bits (310), Expect = 2.500e-24
Identity = 79/200 (39.50%), Postives = 111/200 (55.50%), Query Frame = 0
Query:   12 TEKILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKEL-VASASHHALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYVPA-HVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHILLFRR 210
            T KI +VGG+AVGKTS +RR+  +  +  QY PTIGVDV    LP  +        GD     V +  WDVS  E+    +S HALIC  + GIF V +V    S+AA+D W+H L +Y+ A  +P  LL HKAD++ +     +D  + AY +AAG   W WTVG   FG+     + K   V  A++ +V+ +L  R+
Sbjct:   83 TFKIALVGGSAVGKTSIVRRWTRRSFSS-QYSPTIGVDVHSLRLPHRR--------GD-----VIVQLWDVSSVEVDNTQSSLHALICDELDGIFFVCNVHRVSSIAAIDKWRHSLGKYISAREIPFFLLCHKADMIQKRIMSSDD--IGAYAKAAGYRGWMWTVGRPSFGE-----NEKHPAVMAALERMVECVLQERQ 261          
BLAST of NO08G03460 vs. NCBI_GenBank
Match: ETI36488.1 (hypothetical protein F443_17410 [Phytophthora parasitica P1569])

HSP 1 Score: 123.6 bits (309), Expect = 3.200e-24
Identity = 72/193 (37.31%), Postives = 109/193 (56.48%), Query Frame = 0
Query:   14 KILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASH-HALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205
            K+ +VGG AVGKTS +RR++ +      Y PT+GV+V             N        + + LH WDVS  E+ +SAS  H+L+C ++ GIF V +V    S+AA+D W+H L++Y+ P   P  L++HKADL+ +     +D  + AY RAAG   W WTVG   FG+     + K+  V +A++ +V+ I
Sbjct:   74 KLALVGGPAVGKTSIVRRWLQRSYP-TTYSPTVGVEV-------------NTMTYKHRGQELLLHLWDVSSAEVDSSASSLHSLLCEDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYLSPKETPCFLISHKADLLQKRVMTSDD--IAAYARAAGYKGWMWTVGKANFGE-----NEKNPAVREALERMVEFI 245          
BLAST of NO08G03460 vs. NCBI_GenBank
Match: ETK76720.1 (hypothetical protein L915_16931 [Phytophthora parasitica] >ETL30151.1 hypothetical protein L916_16834 [Phytophthora parasitica] >ETP06312.1 hypothetical protein F441_17278 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 123.6 bits (309), Expect = 3.200e-24
Identity = 72/193 (37.31%), Postives = 109/193 (56.48%), Query Frame = 0
Query:   14 KILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASH-HALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205
            K+ +VGG AVGKTS +RR++ +      Y PT+GV+V             N        + + LH WDVS  E+ +SAS  H+L+C ++ GIF V +V    S+AA+D W+H L++Y+ P   P  L++HKADL+ +     +D  + AY RAAG   W WTVG   FG+     + K+  V +A++ +V+ I
Sbjct:   74 KLALVGGPAVGKTSIVRRWLQRSYP-TTYSPTVGVEV-------------NTMTYKHRGQELLLHLWDVSSAEVDSSASSLHSLLCEDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYLSPKETPCFLISHKADLLQKRVMTSDD--IAAYARAAGYKGWMWTVGKANFGE-----NEKNPAVREALERMVEFI 245          
The following BLAST results are available for this feature:
BLAST of NO08G03460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26795.17.400e-4543.51SH2 domain protein [Nannochloropsis gaditana][more]
CBJ48935.13.500e-2636.68RABSH2, a protein conserved in some stramenopiles ... [more]
XP_009524750.14.500e-2640.41hypothetical protein PHYSODRAFT_489080 [Phytophtho... [more]
XP_008868874.11.500e-2437.76hypothetical protein H310_05820 [Aphanomyces invad... [more]
XP_008868875.11.500e-2437.76hypothetical protein, variant [Aphanomyces invadan... [more]
OWZ18422.11.500e-2438.34hypothetical protein PHMEG_0007490 [Phytophthora m... [more]
XP_024581186.12.500e-2438.14ras family protein [Plasmopara halstedii] >CEG4481... [more]
GAX94985.12.500e-2439.50Hypothetical protein PINS_002874 [Pythium insidios... [more]
ETI36488.13.200e-2437.31hypothetical protein F443_17410 [Phytophthora para... [more]
ETK76720.13.200e-2437.31hypothetical protein L915_16931 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008665NSK008665Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G03460.1NO08G03460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|370256gene_3680Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100018g38gene3721Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G03460.1NO08G03460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G03460 ID=NO08G03460|Name=NO08G03460|organism=Nannochloropsis oceanica|type=gene|length=3140bp
ATGGAATTGCTACCCCCTCCCTGCTTGGAAGTGACGGAGAAGATCCTCAT
AGTTGGCGGGGCCGCTGTGGGCAAGACAAGCTTCATCCGCCGCTTTGTCG
ACAAGCCCTTAGCCGGCCTGCAATACGTCCCTACAATTGGTGTGGATGTT
ATCGTGTACCCTTTACCTGCGTGTCAAGCGACGGCCCGTAACATCACCGA
CGGCGATGACGACGCCCGGCCGGTCCACTTGCATTTTTGGGATGTGAGCC
ATAAGGAATTGGTAGCCTCGGCGAGTCACCACGCCTTGATTTGCACGAAT
GTGTCGGGCATTTTCCTTGTTCTAGATGTAAGTAACCGGGAATCGCTTGC
AGCGGTGGATGCATGGCAGCATTTACTTGCGCGCTACGTCCCGGCACATG
TTCCACGTGTCTTACTGGCCCATAAAGCCGATTTGGTAAACGAAGCAGGT
TGCTGTGTCAATGACAAGCTGCTCGAGGCCTACAAACGCGCGGCGGGTCT
AACAGATTGGTGTTGGACTGTGGGTCATGAGTACTTTGGGGATTACGTCG
CGAATCGATCGAATAAATCCAGGCCAGTTGCCGATGCGGTGCAGTTGTTG
GTGGACCATATTCTTCTTTTTCGACGGGAGGGAGGTGGGGAGGAAGGGGA
AAGGAATGGGGAAACATCAAGGAGGGGGGGGTGGCGGAGGAATGAAGGAC
ACGTGGGTGCTTTGGTGGGAGCAAGAAGTAGGCAAGAAGGGGAGGATGGA
CGGGAGAAGGAAGGGCAAGGAGGAGGAGGAGACAGAGGAGAAGAAGAGAC
AGAAGAGGAAGAAGATTTAGATGCGGATTACGGCGAGGGTCCGCGAGAAG
GTTTACCCTCGGCCATGCAAGTGTTGAGATATCTCCGCATTGACGAGGAA
GAGGAACGTGTCAAGCGACGGGGCATTTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCGCCCTCTTCCGCCTTTC
CCGCCTTTCTCCCATTTTCCACGCGCTGTGCCCATCATCCACGTCGTCTC
CGTCGTGTCATCTCTTGCTACCAACCTCTTCAAGGCTGGTTGCCCTCAGT
CGATCTCGAAGTACTTTTTGACAAGAGCCCCGCCACCTCTGCCACCATCC
AAAATCTCCGTCAACAGCAGCAACAGCAGCAGCAACAGCGACGGCAGCAG
CGCCAAAAAGAAAATCAATCACGACCCTCGTCCTCATACAAACCAGACGC
AGGCTGGCGTCATCTAGCGGGCTGTCTCGGTCGGAACGAAGCCGAAAGTC
TCCTGCGCCCTCGCCCTGTGGGGACCTTCCTCCTTCGGCGCTTCGATGAA
CGCTCCCTCCGTCTCTCCTACCGCACGCAACACTCTGTTGAACATGCCCC
CATCATTTTCACAAGCGAAGGGCGATGGACCCATATCAGATCGGGTTCTG
CTGGAGCTGCAGCTCCGGCTGGGGCTGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGTGGAGGAGGTGGTGCCTTTTCGACATATTCTCCAAGCAATAC
GGCGCCCAACACTCCTCGTGGCTCATCGAGTAGAAATGGAGGGCGAGAAC
GAATCTCCTCCTCCCCCACCTCCTCTTCCATCACCATCTCCTTGCCTTCC
TCCCCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTACCTCGGC
CTCTTCCCTCCTCTCCTTGCCTGTCCAGAAAGCGCAGTTAGTAGGGCATC
AACTACAACTACAGGCTCCTTTTCCACTCGTGCCCCCCTCCATCCGCCCC
AAAACTATCCTTCGCGGGGGCAGAGGGGGCGGGGGAGGAAAGGCAGGAAG
TGGTGCCTTACTCCAACAACAACAGGTGTACCTACAGCAGCACTTGCAGT
TACAGCAGCAGCAACCGCAGTCTTTTGAGACGTTGGACGAATTGTTGAAG
TTCTTCAGTAAGAAGGCCATGCATGGATTGTGTTTTCGACGAGTACCGTG
GACGTGTGAATATGAGGTGGTGGAAGAAGAGGGGGAGGAAGAGAAACAAA
ATGCAGCAGAGGGCGGGGGGGGAGGAGAAAGAGGAGGAGGCGGTGAAGCA
GCAGGAAGTGGGAATGTGCTTTTGGGGTGGTTTCAGCGGCGGGCGTCTCA
TTCGACCTTGCCGAGCAATAGCAAAGGAGAGCAGCCTTCTTCGCCGCAAC
AACAACAGCAGCAGCAGCAGCAGCAGCAGCAGACCGCTTCGCTGCCGTTT
GTGACGGTCCCAACGGTCGAGCAGGTGGATGGTGTATTTAAGGATCTGAA
TCGTGTGTTGAAGGAAGTGTGGATGTATGACGAGAAGGAGAAGAAGACAA
GAAGCAAGAGTGGAGGACGAAGGAGGGTTGTCTTGGGTGAGTACAAGAGA
GAGGGGGAGGGAGTGCAAAGGGCGGTGGAGGATGAAGAAGTGGAGCAAGG
AGCTCTGTTGGGCCTTTGTGGACACAGCCATGGCCGGGTTTTGGTAGCAT
TAGGCTTGGATAGTGATGCTATAGAGAGTGATGGTTGTTCAAAGGGGAAG
GAGGAGGAGGACAAGAACGAGTTCATGCCAGGAATGAGTTCCGTGGATTT
AGTGGAAAGCATCATCGCCCTAGACATCAAGTTCTGCGAGCTACTTCGGT
CCATCAACACCCTCCTATTTGTGGCTGGTGCGTCTTGTCCTTCCTTTACC
TCCACTGCCTCTCAATCATCGCCGGAATCAGCTTCAGCAGCAGCAGCAGC
AGATGTGTTGTCTCATGAGAAAGCAGAGATACAGAAGAAGGCTTACCTTC
AAGCATTACGTGCCCTCGGTCAATGGCGCCCCCTTTTAGAAACCCTCCGA
TTGCGGTTTGAGGCTGAATGAATGGCTGGATGAAAATAAACACAAGAAAA
ATACGTCGCTAAAGTGTTCTGTGTAGCCAGTGATGATGCACAAGAGAAAG
GGACCTGCTTAATTAAGCAGGAAGGGAGTCTCACCATGATGTCAATTTCC
TCTTCAAAGTTTTAAGAAACCTCCTTTGTAGCGGTCACGTAGCAAAAGAG
AGCAAGGGTCATACAAATAAACGCAAGACGATGACAAGCGTTTTTTGGGC
CCTGCATAAGAAAAAGTATTTGACGTTTATCTCTTTCCCG
back to top

protein sequence of NO08G03460.1

>NO08G03460.1-protein ID=NO08G03460.1-protein|Name=NO08G03460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=957bp
MELLPPPCLEVTEKILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDV
IVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASHHALICTN
VSGIFLVLDVSNRESLAAVDAWQHLLARYVPAHVPRVLLAHKADLVNEAG
CCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLL
VDHILLFRREGGGEEGERNGETSRRGGWRRNEGHVGALVGARSRQEGEDG
REKEGQGGGGDRGEEETEEEEDLDADYGEGPREGLPSAMQVLRYLRIDEE
EERVKRRGISSSSSSSSSSSSSSSSSSPPSSAFPAFLPFSTRCAHHPRRL
RRVISCYQPLQGWLPSVDLEVLFDKSPATSATIQNLRQQQQQQQQQRRQQ
RQKENQSRPSSSYKPDAGWRHLAGCLGRNEAESLLRPRPVGTFLLRRFDE
RSLRLSYRTQHSVEHAPIIFTSEGRWTHIRSGSAGAAAPAGAGGGGGGGG
GGGGGGGAFSTYSPSNTAPNTPRGSSSRNGGRERISSSPTSSSITISLPS
SPSSSSSSSSSSSSTSASSLLSLPVQKAQLVGHQLQLQAPFPLVPPSIRP
KTILRGGRGGGGGKAGSGALLQQQQVYLQQHLQLQQQQPQSFETLDELLK
FFSKKAMHGLCFRRVPWTCEYEVVEEEGEEEKQNAAEGGGGGERGGGGEA
AGSGNVLLGWFQRRASHSTLPSNSKGEQPSSPQQQQQQQQQQQQTASLPF
VTVPTVEQVDGVFKDLNRVLKEVWMYDEKEKKTRSKSGGRRRVVLGEYKR
EGEGVQRAVEDEEVEQGALLGLCGHSHGRVLVALGLDSDAIESDGCSKGK
EEEDKNEFMPGMSSVDLVESIIALDIKFCELLRSINTLLFVAGASCPSFT
STASQSSPESASAAAAADVLSHEKAEIQKKAYLQALRALGQWRPLLETLR
LRFEAE*
back to top
Synonyms
Publications