NO08G03200, NO08G03200 (gene) Nannochloropsis oceanica

Overview
NameNO08G03200
Unique NameNO08G03200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2653
Alignment locationchr8:878534..881186 +

Link to JBrowse

Properties
Property NameValue
DescriptionD-xylose-proton symporter-like protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:878534..881186 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
IPR020846MFS_dom
IPR005828Sub_transporter
IPR003663Sugar/inositol_transpt
Homology
BLAST of NO08G03200 vs. NCBI_GenBank
Match: EWM26836.1 (d-xylose-proton symporter-like protein [Nannochloropsis gaditana])

HSP 1 Score: 657.1 bits (1694), Expect = 5.200e-185
Identity = 367/563 (65.19%), Postives = 414/563 (73.53%), Query Frame = 0
Query:   11 ASAGARTGAVASIFIFCALGGLLFGWDIGATAYVLTQVQSADKAGVAWGERIEANSALRGFFTASAVGGALVGTMIVLQVESWLGRRRELLLASCLYMLGGMTEFGSSFVSNDVGLAICLPGRWVYGGGIAFAMHAAPAYLAEMSPPSIRGLLVAAKEGMIVLGILFAQIAGFHFQDAEGGWRWTFFLSVPLAALMGAGMLRLPPSARWLALQGRWEEAEASLRFFMKCGVGLAMEEIKASMVLE----DVRLREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRHA-------DKKDA-----KHKPTISQVIRNPRYRRALIVGIGVVTLQQISGQPSVLYFCNEILRDFGLSDSATLLVGLFKLIATMGTVFTVDRYGRRTLLLTGIAVMLVALALLTTAFAFDKEDEVEATGQALDILLIGALFLYIAGYQIGFGPISWILVSEIYPTEVRGETVALAVMANFAFNLVVTFAFDSLRESLGTSATFGLFLGIAAGGWAFVYVLLPETNGLSLEMIEAKFAASALSPFSRWSRGGRVDEVGGRGDEREGLLAWFHRRV 558
            +++G RT AV +IFIFCALGGLLFGWDIGATAYVLTQ+QS DKAGVAWGERIE++S LRGFFTASAVGGAL+GT++VLQVE  +GR                 EF SSF+S+D GL +CL GRW+YGGGIAFAMHAAPAYLAEMSPP IRG +VA KEGMIVLGIL +Q+AGF F+D EGGWRW FF+SVPL A MG GM RLP SARWLALQGR EEAE SLRFFMK GVGLAMEEIKASM  E    +     G                             T H+         KDA     + K TI QV+RN RYRR LIVG+GVVT QQ+SGQPSVLYF NEILRDFGL+DSATLLVG+FKL+ATMG V TVDR GRRTLLL GI VM++ALALL+  FA +KE    A GQALD +LI A+FLYIAGYQ+GFGP+SWILVSEIYPTEVRGETV LAVMANF  NL+VTFAFD +RES+GTSATFGLFLG+A   W FVY+LLPET GL+LEMI A+F + A +  SRW  G     VG      EGLL+WFHR V
Sbjct:    4 STSGMRTCAVIAIFIFCALGGLLFGWDIGATAYVLTQLQS-DKAGVAWGERIESSSVLRGFFTASAVGGALLGTVVVLQVEGSMGRXXXXXXXXXXXXXXXXFEFASSFLSSDAGLVVCLLGRWIYGGGIAFAMHAAPAYLAEMSPPGIRGFMVALKEGMIVLGILLSQVAGFIFKDMEGGWRWPFFMSVPLGAAMGLGMSRLPSSARWLALQGRLEEAEDSLRFFMKGGVGLAMEEIKASMQDEEEWTEADAAGGDGMDGDAGVLGDGRGMRGSGGDKSEGAKSTHHSLVLDGGEGMKDAWKGKKRKKTTILQVLRNSRYRRPLIVGLGVVTFQQVSGQPSVLYFSNEILRDFGLADSATLLVGVFKLVATMGAVLTVDRRGRRTLLLLGIGVMVLALALLSAMFAVEKEP--GAKGQALDGVLIAAMFLYIAGYQVGFGPVSWILVSEIYPTEVRGETVGLAVMANFGSNLLVTFAFDPVRESIGTSATFGLFLGVAMAAWLFVYMLLPETKGLALEMIGAQFQSFAST--SRWGSG----MVG-----TEGLLSWFHRHV 552          
BLAST of NO08G03200 vs. NCBI_GenBank
Match: XP_009036253.1 (general sugar transporter [Aureococcus anophagefferens] >EGB09136.1 general sugar transporter [Aureococcus anophagefferens])

HSP 1 Score: 356.3 bits (913), Expect = 1.900e-94
Identity = 228/518 (44.02%), Postives = 299/518 (57.72%), Query Frame = 0
Query:   19 AVASIFIFCALGGLLFGWDIGATAYVLTQVQSADKAGVAWGERIEANSALRGFFTASAVGGALVGTMIVLQVESWLGRRRELLLASCLYMLGGMTEF-----GSSFVSNDVGLAICLPGRWVYGGGIAFAMHAAPAYLAEMSPPSIRGLLVAAKEGMIVLGILFAQIAGFHFQDAEGGWRWTFFLSVPLAALMGAGMLRLPPSARWLALQGRWEEAEASLRFFMKCGVGLAMEEIKASMVLEDVRLREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRHADKKDAKHKPTISQVIRNPRYRRALIVGIGVVTLQQISGQPSVLYFCNEILRDFGLSDSATLLVGLFKLIATMGTVFTVDRYGRRTLLLTGIAVMLVALALLTTAF-AFDKEDEVEATGQALDILLIGALFLYIAGYQIGFGPISWILVSEIYPTEVRGETVALAVMANFAFNLVVTFAF----DSLRESLGT----SATFGLFLGIAAGGWAFVYVLLPETNGLSLEMIEAKFAAS 523
            AVA IF F ALGGLLFG+DIGAT+YVLTQ+QSA  +GV+W + +  +SAL+G  T+  VGGA VG  IV +V   LGRRRELLL + LY+LG   EF     G        GL + + GR+VYG G  F MH AP+Y+AEMSP +IRG LV+ KE  IV+GI      GF  ++  GGWR+T+  S+PLA L+  G   LPPSARWL+L+G    A ASL F       L +E   A +                                     X         A+ +P   + + + +YRRAL  G+GVV LQQ++GQPSVLY+ + I    G+   AT+ VG+FKL AT+  V TVDR GRR LL  G+  M +ALA L  AF  FD      A   A    ++G +F+YIAGYQ+GFGPI+W+L+SE++P EVRG+ VALAV ANFA N++V+F F      L+  LG+    +  FG+F  +      F+   +PET G++LE IE   A S
Sbjct:    8 AVARIFFFPALGGLLFGYDIGATSYVLTQLQSAKFSGVSWYDLVARSSALQGLVTSGGVGGAFVGASIVFKVADDLGRRRELLLGAALYVLGAACEFLGGGVGPYESGAGDGLFLLVLGRFVYGVGCGFVMHGAPSYIAEMSPAAIRGTLVSLKEAAIVVGICLGYGLGFALRETAGGWRYTYAASIPLALLLYWGAYCLPPSARWLSLKGDAAGARASLTFVYPNDDAL-LEAAVAEL-------------------------------------XXXXXXXXXXARGEP---RSLLDAKYRRALTAGLGVVLLQQLTGQPSVLYYASTIFDAAGIGTVATVFVGVFKLFATLFAVVTVDRRGRRELLFVGVGSMFLALAALALAFYDFDPSGGFSAQKGA----IVGLIFVYIAGYQVGFGPIAWLLISEVFPLEVRGQAVALAVQANFASNMLVSFLFPVAQTGLKALLGSTWYLTVLFGIFAVLDLYALHFINRNVPETKGMTLEEIERFLAGS 480          
BLAST of NO08G03200 vs. NCBI_GenBank
Match: CBJ33077.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 329.7 bits (844), Expect = 1.900e-86
Identity = 205/557 (36.80%), Postives = 287/557 (51.53%), Query Frame = 0
Query:    9 GAASAGARTGAVASIFIFCALGGLLFGWDIGATAYVLTQVQSADKAGVAWGERIEANSALRGFFTASAVGGALVGTMIVLQVESWLGRRRELLLASCLYMLGGMTE--FGSSFVSNDVGLAICLPGRWVYGGGIAFAMHAAPAYLAEMSPPSIRGLLVAAKEGMIVLGILFAQIAGFHFQDAEGGWRWTFFLSVPLAALMGAGMLRLPPSARWLALQGRWEEAEASLRFFMKCGVGLAMEEIKASMVLEDVRLREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRHADKKDAKHKPTISQVIRNPRYRRALIVGIGVVTLQQISGQPSVLYFCNEILRDFGLSDSATLLVGLFKLIATMGTVFTVDRYGRRTLLLTGIAVMLVALALLTTAFAFDKEDEVEATGQALD--------------------------------------------ILLIGALFLYIAGYQIGFGPISWILVSEIYPTEVRGETVALAVMANFAFNLVVTFAFDSLRESLGTSATFGLFLGIAAGGWAFVYVLLPETNGLSLEMIEAKF 520
            G  S    + AV ++F F ALGGLLFG+DIGAT+ VLTQ++S+  + V+W   + +++ L+G  T++AV GA++G++I  +V   LGRRRE+L+A+ L+  G + E   GSS  S D GL + + GR  YG G  FAMH APAY+ EMSP ++RG+LV+ KE MIV+G+LF    G++ +D   GWR+T+      A +M AGM  +PPSARWL   G  +EA  SL+F       LA+ EI                                                                                 Q++GQPSVLY+ + I  D GL  SA++LV  FKL+AT+  VFTVD++GR  LL  G  +ML+AL  LT AF FD   E +      D                                              ++ A+F+YI GYQ+GFGP+ W+++SEI+P +VRG+ +++AV+ NF FNL+VTF F ++ E LG+S TF +F    A    F+   +PET GLSLE IEA F
Sbjct:   35 GGGSQAYSSAAVFAVFFFPALGGLLFGYDIGATSSVLTQLESSTYSDVSWYNVVASSTLLQGIITSNAVLGAMIGSIICFRVGDALGRRREILVAAVLFFFGAIIEAVSGSSVWSGDWGLVVLMIGRVSYGVGCGFAMHGAPAYIGEMSPAAVRGVLVSLKEAMIVVGMLFGYSIGWYLEDTVAGWRFTYGAGAFPAVIMFAGMFLMPPSARWLVFSGEMDEARKSLQFVTPGISELAVAEI---------------------------------------------------------------------------------QVTGQPSVLYYADTIFEDVGLDSSASVLVAAFKLVATLCAVFTVDKHGRVKLLNIGCMLMLLALIALTIAFMFDYVSEEDCNDYTTDSTCSAYSDKCEWDTSCXXXXXXXXXXXXXXXXXXXGVAGLDTQKACILAAMFVYIGGYQVGFGPVVWLIISEIFPLDVRGKAISVAVVVNFGFNLLVTFIFPTMLEDLGSSWTFAIFAVADAYSLYFIKTRVPETKGLSLEQIEALF 510          
BLAST of NO08G03200 vs. NCBI_GenBank
Match: XP_002179486.1 (TRD4, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC49309.1 TRD4, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 321.6 bits (823), Expect = 5.100e-84
Identity = 200/501 (39.92%), Postives = 279/501 (55.69%), Query Frame = 0
Query:   19 AVASIFIFCALGGLLFGWDIGATAYVLTQVQSADKAGVAWGERIEANSALRGFFTASAVGGALVGTMIVLQVESWLGRRRELLLASCLYMLGGMTEFGSSFVSN---DVGLAICLPGRWVYGGGIAFAMHAAPAYLAEMSPPSIRGLLVAAKEGMIVLGILFAQIAGFHFQDAEGGWRWTFFLSVPLAALMGAGMLRLPPSARWLALQGRWEEAEASLRFFMKCGVGLAMEEIKASMVLEDVRLREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRHADKKDAKHKPTISQVIRNPRYRRALIVGIGVVTLQQISGQPSVLYFCNEILRDFGLSDSATLLVGLFKLIATMGTVFTVDRYGRRTLLLTGIAVMLVALALLTTAFAFDKEDEVEATGQALDILLIGALFLYIAGYQIGFGPISWILVSEIYPTEVRGETVALAVMANFAFNLVVTFAFDSLRESLGTSATFGLFLGIAAGGWAFVYVLLPETNGLSLEMIE 517
            AVA IF   ALGG  FG+DIGAT+Y + Q+QS   +GV+W   + ++  LRG   +S   GAL+G+ +   +   +GRRREL L S LY+LG + E  ++  S+    +G+ + + GR VYG GI  +MHAAP Y+AEM P SIRGLLV+ KE  IVLGIL   + G+      GGW W +  S   + LM     R+P S RWL L    +EA  SL+F           E +A +   +++                                    +D+++ K        + +  YR  LI G+G+V LQQI+GQPSVL +   I RD GLSDSA +L+ LFKL+AT+    TV++YGR+ LL TG ++ML+ L +L  +F+ D    +        + ++ A+F+YI GYQ+GFGPI+W+L SE+YP  +RG+ VA+AV  NF  N  V F    L+E +G S TF LF  + A    FV   +PET GLSLE IE
Sbjct:   16 AVALIFAVPALGGFNFGFDIGATSYAIVQMQSPVLSGVSWFHTVLSSPILRGTILSSGSAGALIGSSLAFAIGDKIGRRRELQLGSLLYLLGALLEVWTAQSSSWGAVLGITVLILGRVVYGIGIGISMHAAPTYIAEMGPSSIRGLLVSLKEASIVLGILTGYMIGYACSKHTGGWAWIYASSTMFSMLMLILSTRIPRSCRWLMLNNMEDEALESLQF--------VFTEEQAQVEFSNMKQSHEEACALL--------------------------SDEEEEK-------TVWHRSYRAPLIAGVGLVVLQQITGQPSVLSYATPIFRDAGLSDSAPVLLALFKLLATLSAAVTVEKYGRKMLLYTGCSLMLIGLTIL--SFSLDGGTYI------AKVAVLVAMFVYIGGYQVGFGPITWLLTSELYPLSIRGQAVAIAVQMNFLLNTAVQFGVPLLQEVIGLSFTFALFGILTAYSIFFVATRVPETKGLSLEEIE 467          
BLAST of NO08G03200 vs. NCBI_GenBank
Match: XP_010685696.1 (PREDICTED: D-xylose-proton symporter-like 3, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 309.7 bits (792), Expect = 2.000e-80
Identity = 200/502 (39.84%), Postives = 282/502 (56.18%), Query Frame = 0
Query:   24 FIFCALGGLLFGWDIGATAYVLTQVQSADKAGVAWGERIEANSALRGFFTASAVGGALVGTMIVLQVESWLGRRRELLLASCLYMLGGMTEFGSSFVSNDVGLAICLPGRWVYGGGIAFAMHAAPAYLAEMSPPSIRGLLVAAKEGMIVLGILFAQIAGFHFQDAEGGWRWTFFLSVPLAALMGAGMLRLPPSARWLALQGRWEEAEASLRFFMKCGVGLAMEEIKASMVLEDVRLREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRHADKKDAKHKPTISQVIRNPRYRRALIVGIGVVTLQQISGQPSVLYFCNEILRDFGLSDSA-----TLLVGLFKLIATMGTVFTVDRYGRRTLLLTGIAVMLVALALLTTAFAFDKEDEVEATGQALDILLIGALFLYIAGYQIGFGPISWILVSEIYPTEVRGETVALAVMANFAFNLVVTFAFDSLRESLGTSATFGLFLGIAAGGWAFVYVLLPETNGLSLEMIEAKFA 521
            F+F ALGGLLFG+DIGAT+     +QS + +G  W      ++  +G   + ++ GAL G+++V  +  +LGRRRELL+A+ LY +GG+T   ++F     GL + L GR +YG GI +AMHAAP Y+AE  P  IRG L++ KE  IVLGIL     G    +A GGWR+ F LSVP+AA+MG GM  LPPS RWL L  R  + + SL+ + +  V  A+ +++     + V  ++                                     D + + +  +V + P   +A I+G G+V  QQI+GQPSVLY+  +IL+  G S ++     ++L+GLFK + T   V  VD  GR+ LL+ G++ + VAL LL   + F            L  + + AL LY+  YQI FGPISW++VSEI+P   RG  ++LAV+ NF  N +VTFAF  L+E LG    F LF  IA     FV  L+PET GLSLE IEAK +
Sbjct:  110 FLFPALGGLLFGYDIGATSGATISLQSPELSGTTW---FNLSAVQQGLVVSGSLYGALFGSIMVFPIADFLGRRRELLIAATLYAIGGLT---TAFAP---GLEVLLFGRLIYGLGIGWAMHAAPLYIAETCPSQIRGTLISLKELFIVLGILLGFFVGSFEIEAVGGWRYMFGLSVPVAAVMGLGMFSLPPSPRWLLL--RAVQGKGSLQEYKEKAV-TALSKLRGRPAGDKVSEKQ-------------------------IDDTLVSMKSAYDRESEASFLEVFQGPNL-KAFIIGGGLVLFQQITGQPSVLYYAGQILQSAGFSAASDATRVSVLIGLFKFVMTGVAVLKVDDLGRKPLLIGGVSGITVALFLLAAYYKF---------LGGLPFVAVAALLLYVGSYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNALVTFAFSPLKELLGADNLFLLFGVIALLSLVFVLTLVPETKGLSLEEIEAKLS 564          
BLAST of NO08G03200 vs. NCBI_GenBank
Match: KMT05186.1 (hypothetical protein BVRB_7g173330 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 309.7 bits (792), Expect = 2.000e-80
Identity = 200/502 (39.84%), Postives = 282/502 (56.18%), Query Frame = 0
Query:   24 FIFCALGGLLFGWDIGATAYVLTQVQSADKAGVAWGERIEANSALRGFFTASAVGGALVGTMIVLQVESWLGRRRELLLASCLYMLGGMTEFGSSFVSNDVGLAICLPGRWVYGGGIAFAMHAAPAYLAEMSPPSIRGLLVAAKEGMIVLGILFAQIAGFHFQDAEGGWRWTFFLSVPLAALMGAGMLRLPPSARWLALQGRWEEAEASLRFFMKCGVGLAMEEIKASMVLEDVRLREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRHADKKDAKHKPTISQVIRNPRYRRALIVGIGVVTLQQISGQPSVLYFCNEILRDFGLSDSA-----TLLVGLFKLIATMGTVFTVDRYGRRTLLLTGIAVMLVALALLTTAFAFDKEDEVEATGQALDILLIGALFLYIAGYQIGFGPISWILVSEIYPTEVRGETVALAVMANFAFNLVVTFAFDSLRESLGTSATFGLFLGIAAGGWAFVYVLLPETNGLSLEMIEAKFA 521
            F+F ALGGLLFG+DIGAT+     +QS + +G  W      ++  +G   + ++ GAL G+++V  +  +LGRRRELL+A+ LY +GG+T   ++F     GL + L GR +YG GI +AMHAAP Y+AE  P  IRG L++ KE  IVLGIL     G    +A GGWR+ F LSVP+AA+MG GM  LPPS RWL L  R  + + SL+ + +  V  A+ +++     + V  ++                                     D + + +  +V + P   +A I+G G+V  QQI+GQPSVLY+  +IL+  G S ++     ++L+GLFK + T   V  VD  GR+ LL+ G++ + VAL LL   + F            L  + + AL LY+  YQI FGPISW++VSEI+P   RG  ++LAV+ NF  N +VTFAF  L+E LG    F LF  IA     FV  L+PET GLSLE IEAK +
Sbjct:   47 FLFPALGGLLFGYDIGATSGATISLQSPELSGTTW---FNLSAVQQGLVVSGSLYGALFGSIMVFPIADFLGRRRELLIAATLYAIGGLT---TAFAP---GLEVLLFGRLIYGLGIGWAMHAAPLYIAETCPSQIRGTLISLKELFIVLGILLGFFVGSFEIEAVGGWRYMFGLSVPVAAVMGLGMFSLPPSPRWLLL--RAVQGKGSLQEYKEKAV-TALSKLRGRPAGDKVSEKQ-------------------------IDDTLVSMKSAYDRESEASFLEVFQGPNL-KAFIIGGGLVLFQQITGQPSVLYYAGQILQSAGFSAASDATRVSVLIGLFKFVMTGVAVLKVDDLGRKPLLIGGVSGITVALFLLAAYYKF---------LGGLPFVAVAALLLYVGSYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNALVTFAFSPLKELLGADNLFLLFGVIALLSLVFVLTLVPETKGLSLEEIEAKLS 501          
BLAST of NO08G03200 vs. NCBI_GenBank
Match: XP_021848018.1 (D-xylose-proton symporter-like 3, chloroplastic [Spinacia oleracea] >KNA20180.1 hypothetical protein SOVF_054960 [Spinacia oleracea])

HSP 1 Score: 309.7 bits (792), Expect = 2.000e-80
Identity = 198/502 (39.44%), Postives = 284/502 (56.57%), Query Frame = 0
Query:   24 FIFCALGGLLFGWDIGATAYVLTQVQSADKAGVAWGERIEANSALRGFFTASAVGGALVGTMIVLQVESWLGRRRELLLASCLYMLGGMTEFGSSFVSNDVGLAICLPGRWVYGGGIAFAMHAAPAYLAEMSPPSIRGLLVAAKEGMIVLGILFAQIAGFHFQDAEGGWRWTFFLSVPLAALMGAGMLRLPPSARWLALQGRWEEAEASLRFFMKCGVGLAMEEIKASMVLEDVRLREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRHADKKDAKHKPTISQVIRNPRYRRALIVGIGVVTLQQISGQPSVLYFCNEILRDFGLSDSA-----TLLVGLFKLIATMGTVFTVDRYGRRTLLLTGIAVMLVALALLTTAFAFDKEDEVEATGQALDILLIGALFLYIAGYQIGFGPISWILVSEIYPTEVRGETVALAVMANFAFNLVVTFAFDSLRESLGTSATFGLFLGIAAGGWAFVYVLLPETNGLSLEMIEAKFA 521
            F+F ALGGLLFG+DIGAT+     +QSA+ +G  W      ++  +G   + ++ GAL G++ V  +  +LGRRRELL+A+ LY +GG+T   ++F  +   L + L GR +YG GI +AMHAAP Y+AE  P  IRG L++ KE  IVLGIL     G    D  GGWR+ F LS+P+AA MG GML LP S RWL L+G   + E SL+ + +  +  A+ +++     + V  ++                              +  +  +D + + +  +V + P   +A I+G G+V  QQI+GQPSVLY+  +IL+  G S +A     ++L+GLFK + T   V  VD  GR+ LL+ G++ + V+L LL   + F            L  + + AL LY+  YQI FGPISW++VSEI+P   RG  ++LAV+ NF  N +VTFAF  L+E LG    F +F  IA     FV  L+PET GLSLE IEAK +
Sbjct:  106 FLFPALGGLLFGYDIGATSGATISLQSAELSGTTW---FNLSAVQQGLVVSGSLYGALFGSIAVFPIADFLGRRRELLIAATLYAIGGLT---TAFAPS---LGVLLIGRLLYGLGIGWAMHAAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGNFNIDMVGGWRYMFGLSLPVAAAMGLGMLSLPRSPRWLLLKG--VKGEGSLQEYKELAIA-ALSKLRGRPAGDKVSEKQ------------------------IEDTLVSMKSAYQDQESEGSFLEVFQGPNL-KAFIIGGGLVLFQQITGQPSVLYYAGQILQSAGFSAAADATRVSVLIGLFKFVMTGVAVLKVDDLGRKPLLIGGVSGIAVSLFLLAAYYKF---------LGGLPFVAVAALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNALVTFAFSPLKEFLGADNLFLIFGAIALLSLVFVLTLVPETKGLSLEEIEAKLS 561          
BLAST of NO08G03200 vs. NCBI_GenBank
Match: XP_023924696.1 (D-xylose-proton symporter-like 3, chloroplastic [Quercus suber] >POE95433.1 d-xylose-proton symporter-like 3, chloroplastic [Quercus suber])

HSP 1 Score: 308.9 bits (790), Expect = 3.500e-80
Identity = 198/500 (39.60%), Postives = 282/500 (56.40%), Query Frame = 0
Query:   24 FIFCALGGLLFGWDIGATAYVLTQVQSADKAGVAWGERIEANSALRGFFTASAVGGALVGTMIVLQVESWLGRRRELLLASCLYMLGGMTEFGSSFVSNDVGLAICLPGRWVYGGGIAFAMHAAPAYLAEMSPPSIRGLLVAAKEGMIVLGILFAQIAGFHFQDAEGGWRWTFFLSVPLAALMGAGMLRLPPSARWLALQGRWEEAEASLRFFMKCGVGLAMEEIKASMVLEDVRLREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRHADKKDAKHKPTISQVIRNPRYRRALIVGIGVVTLQQISGQPSVLYFCNEILRDFGLSDSA-----TLLVGLFKLIATMGTVFTVDRYGRRTLLLTGIAVMLVALALLTTAFAFDKEDEVEATGQALDILLIGALFLYIAGYQIGFGPISWILVSEIYPTEVRGETVALAVMANFAFNLVVTFAFDSLRESLGTSATFGLFLGIAAGGWAFVYVLLPETNGLSLEMIEAK 519
            F+F ALGGLLFG+DIGAT+     +QS + +G  W      ++   G   + ++ GAL+G+++V  +  +LGRRREL++A+ LY LGG+T       +N  GL + L GR +YG GI  AMH AP Y+AE  P  IRG LV+ KE  IVLGIL     G    D  GGWR+ F +S P+A LMG GM  LPPS RWL L  R  + + SL+ + +  V LA+  ++     E +  R+                              T +AD++    + +I +V + P   +A I+G G+V  QQI+GQPSVLY+   IL+  G S ++     ++++G+FKL+ T   V  VD  GRR LL+ G++ + ++L LL+  + F              ++ + AL LY+  YQI FGPISW++VSEI+P   RG  ++LAV+ NF  N +VTFAF  L+E LG    F LF  IA     FV +++PET GLSLE IE+K
Sbjct:  101 FLFPALGGLLFGYDIGATSSATLSLQSPELSGTTW---FNLSAIQLGLVVSGSLYGALLGSILVYSIADFLGRRRELIIAAMLYALGGLT------TANAPGLGVLLAGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLVSLKELFIVLGILLGYFVGSFQIDVVGGWRYMFGVSAPVALLMGLGMWSLPPSPRWLLL--RAVQGKGSLQDYKEKAV-LALSRLRGRPPSEKLSERQ---------------------IEDTFVSLKTTYADQES---EGSILEVFQGPSL-KAFIIGGGLVLFQQITGQPSVLYYAGPILQTAGFSAASDATRVSVVIGVFKLLMTWIAVLKVDDLGRRPLLIGGVSGIAISLVLLSAYYKF---------LGGFPLVAVAALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEWLGAENLFLLFGAIALLSLLFVILVVPETKGLSLEEIESK 554          
BLAST of NO08G03200 vs. NCBI_GenBank
Match: PSR86127.1 (D-xylose-proton symporter-like [Actinidia chinensis var. chinensis])

HSP 1 Score: 306.6 bits (784), Expect = 1.700e-79
Identity = 196/500 (39.20%), Postives = 278/500 (55.60%), Query Frame = 0
Query:   24 FIFCALGGLLFGWDIGATAYVLTQVQSADKAGVAWGERIEANSALRGFFTASAVGGALVGTMIVLQVESWLGRRRELLLASCLYMLGGMTEFGSSFVSNDVGLAICLPGRWVYGGGIAFAMHAAPAYLAEMSPPSIRGLLVAAKEGMIVLGILFAQIAGFHFQDAEGGWRWTFFLSVPLAALMGAGMLRLPPSARWLALQGRWEEAEASLRFFMKCGVGLAMEEIKASMVLEDVRLREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRHADKKDAKHKPTISQVIRNPRYRRALIVGIGVVTLQQISGQPSVLYFCNEILRDFGLSDSA-----TLLVGLFKLIATMGTVFTVDRYGRRTLLLTGIAVMLVALALLTTAFAFDKEDEVEATGQALDILLIGALFLYIAGYQIGFGPISWILVSEIYPTEVRGETVALAVMANFAFNLVVTFAFDSLRESLGTSATFGLFLGIAAGGWAFVYVLLPETNGLSLEMIEAK 519
            F+F ALGGLLFG+DIGAT+     +QS + +G AW      ++   G   + ++ GAL+G+++V  +  +LGRRREL++A+ LY LGG+        SN  GL + L GR +YG GI  AMH AP Y+AE  P  IRG L++ KE  IVLGIL     G    DA GGWR+ + +S P+A +MG GM  LPPS RWL LQ    + +AS++ + +          KA   L  +R R                               +  +  KD +++ +  +V + P   +A ++G G+V  QQI+GQPSVLY+   IL+  G S +A     ++++GLFKL+ T   V  VD  GRR LL+ G++ + ++L LL+  +        +  G     + + AL LY+  YQI FGPISW++VSEI+P   RG+ ++LAV+ NF  N +VTFAF  L+E LG    F LF  IA     FV   +PET GLSLE IE+K
Sbjct:  107 FLFPALGGLLFGYDIGATSGATISLQSPELSGTAW---FNLSAVQLGLVVSGSLYGALLGSLLVYPISDFLGRRRELIIAAVLYALGGL------ITSNAPGLGVLLIGRIIYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQIDAIGGWRYMYGVSAPVALIMGLGMWILPPSPRWLLLQA--VQGKASIQEYKE----------KAIFALSKLRGRPAGDKVSESQIEDTLD---------------SLKSVYKDEEYEGSFLEVFQGPSL-KAFVIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGLFKLLMTSVAVLKVDNLGRRPLLIGGVSGIALSLFLLSAYY--------KVLG-GFPFVAVAALLLYVGCYQISFGPISWLMVSEIFPLRTRGKGISLAVLTNFGSNAIVTFAFSPLKELLGGENLFLLFGAIALASLLFVVFYVPETKGLSLEEIESK 560          
BLAST of NO08G03200 vs. NCBI_GenBank
Match: XP_021715396.1 (D-xylose-proton symporter-like 3, chloroplastic [Chenopodium quinoa])

HSP 1 Score: 306.2 bits (783), Expect = 2.200e-79
Identity = 196/502 (39.04%), Postives = 285/502 (56.77%), Query Frame = 0
Query:   24 FIFCALGGLLFGWDIGATAYVLTQVQSADKAGVAWGERIEANSALRGFFTASAVGGALVGTMIVLQVESWLGRRRELLLASCLYMLGGMTEFGSSFVSNDVGLAICLPGRWVYGGGIAFAMHAAPAYLAEMSPPSIRGLLVAAKEGMIVLGILFAQIAGFHFQDAEGGWRWTFFLSVPLAALMGAGMLRLPPSARWLALQGRWEEAEASLRFFMKCGVGLAMEEIKASMVLEDVRLREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRHADKKDAKHKPTISQVIRNPRYRRALIVGIGVVTLQQISGQPSVLYFCNEILRDFGLSDSA-----TLLVGLFKLIATMGTVFTVDRYGRRTLLLTGIAVMLVALALLTTAFAFDKEDEVEATGQALDILLIGALFLYIAGYQIGFGPISWILVSEIYPTEVRGETVALAVMANFAFNLVVTFAFDSLRESLGTSATFGLFLGIAAGGWAFVYVLLPETNGLSLEMIEAKFA 521
            F+F ALGGLLFG+DIGAT+     +QS + +G AW      ++  +G   + ++ GAL G++IV  +  +LGR+RELL+A+ LY +GG+T   ++F  +   L   L GR +YG GI +AMH AP Y+AE  P  IRG L++ KE  IVLGIL     G    D  GGWR+ F LS+P+AA+MG GML LPPS RWL L+G   + + SL+ + +  +  A+ +++     + V  ++                              + + D+++     +  +V + P   +A I+G G+V  QQI+GQPSVLY+  +IL+  G S ++     ++L+GLFK + T   V  VD  GR+ LL+ G++ + V+L LL   + F            L  + + AL LY+  YQI FGPISW++VSEI+P   RG  ++LAV+ NF  N +VTFAF  L+E LG    F LF  IA     F+  L+PET GLSLE IEAK +
Sbjct:  104 FLFPALGGLLFGYDIGATSGATISLQSPELSGTAW---FNLSAVQQGLVVSGSLYGALFGSIIVYPIADFLGRKRELLIAATLYAIGGLT---TAFAPS---LNTLLIGRLLYGLGIGWAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGNFNIDVVGGWRYMFGLSLPVAAVMGLGMLSLPPSPRWLLLRG--VKGQGSLQEYKERAI-TALSKLRGRSAGDKVSEKK---------------------IEDMLVSMKSSYQDQEEG----SFLEVFQGPNL-KAFIIGGGLVLFQQITGQPSVLYYAGQILQSAGFSVASDATRVSVLIGLFKFVMTGVAVLKVDDLGRKPLLIGGVSGIAVSLFLLAAYYKF---------LGGLPFVAVAALLLYVGSYQISFGPISWLMVSEIFPVRTRGRGISLAVLTNFGSNALVTFAFSPLKELLGADNLFLLFGAIALLSLVFILTLVPETKGLSLEEIEAKLS 558          
The following BLAST results are available for this feature:
BLAST of NO08G03200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26836.15.200e-18565.19d-xylose-proton symporter-like protein [Nannochlor... [more]
XP_009036253.11.900e-9444.02general sugar transporter [Aureococcus anophageffe... [more]
CBJ33077.11.900e-8636.80conserved unknown protein [Ectocarpus siliculosus][more]
XP_002179486.15.100e-8439.92TRD4, partial [Phaeodactylum tricornutum CCAP 1055... [more]
XP_010685696.12.000e-8039.84PREDICTED: D-xylose-proton symporter-like 3, chlor... [more]
KMT05186.12.000e-8039.84hypothetical protein BVRB_7g173330 [Beta vulgaris ... [more]
XP_021848018.12.000e-8039.44D-xylose-proton symporter-like 3, chloroplastic [S... [more]
XP_023924696.13.500e-8039.60D-xylose-proton symporter-like 3, chloroplastic [Q... [more]
PSR86127.11.700e-7939.20D-xylose-proton symporter-like [Actinidia chinensi... [more]
XP_021715396.12.200e-7939.04D-xylose-proton symporter-like 3, chloroplastic [C... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008705NSK008705Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G03200.1NO08G03200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669584gene_3650Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100018g2gene3752Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G03200.1NO08G03200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G03200 ID=NO08G03200|Name=NO08G03200|organism=Nannochloropsis oceanica|type=gene|length=2653bp
GCCGTTGTGCACCGCAACACACGACCCCGCCCTGACCACGCAAGCACACC
CGCATTGTCGAACCATCACCACCTCAGCGAAAAAAACTACAGCATCGACA
ACGTGCTGTGGGTGAAAGTGGACGTCTGCGGCCAGCATTGGCGGAGGAAA
TACGCACTTCATCCTCATCAGCATCACCAAGCTCATCCACGTCATGCCTA
TCACCCAAACACAGGCAAGCGCAACGCGAGAGCACAAAATCCAGCAAACC
CAACCCACGACCTCACGTGCAACGCCAATCCCTGCAAGGCCACGTTAATT
CCCAGATCAGCAAGGACTCGCAGCTTTTCCTGTTTCATTTGCTCAGCCAA
TGCCGTGGCCTAGCGTATGCACGGGAGCCGCTTCCGCTGGCGCTCGGACG
GGTGCAGTGGCCTCCATCTTCATCTTTTGTGCGCTGGGGGGCTTGCTTTT
CGGGTGGGATATTGgtgagtaactgaagacgagaagaaaggtagtggttt
gagagcaaggtggactgcgacaggctgacccaaacgttactctgcaacct
tcccggcccctttcgtgcaccacagGGGCGACCGCCTATGTCCTAACTCA
GGTCCAGTCCGCCGACAAGGCGGGCGTCGCATGGGGAGAGCGTATTGAGG
CTAATTCTGCCCTGCGTGGTTTCTTCACAGCTTCAGCAGTTGGTGGCGCC
TTAGTGGGCACAATGATCGTCCTGCAGGTCGAAAGCTGGCTGGGCCGGCG
GCGGGAGTTGCTGCTGGCATCGTGCTTGTACATGCTCGGAGGAATGACGG
AGTTTGGCTCAAGCTTTGTATCTAATGATGTGGGATTGGCCATATGTTTG
CCAGGTCGGTGGGTGTATGGAGGAGGAATCGCCTTTGCCATGCACGCTGC
TCCAGCGTACCTTGCCGAGATGTCCCCTCCGTCCATACGTGGGCTTCTCG
TTGCCGCAAAGGAGGGTATGATTGTCTTGGGAATTTTGTTCGCCCAAATC
GCTGGATTTCACTTCCAGGACGCAGAAGGGGGTTGGCGGTGGACCTTTTT
TTTGTCCGTGCCTCTGGCTGCGCTGATGGGGGCGGGCATGCTGAGACTGC
CACCGTCGGCTCGCTGGTTGGCATTGCAGGGACGGTGGGAGGAGGCAGAG
GCGAGTCTGAGGTTTTTCATGAAGTGTGGCGTGGGGCTTGCGATGGAGGA
GATTAAGGCCAGCATGGTGCTGGAAGACGTGCGGCTTCGTGAGGGAGGGG
AGGAAGAAGGACGAGAGGAGGGAGGGTCTGGGGCCCGTAACCAGAGCAGT
AGCAGTAGCAGCAGCAGTAATGAGAAAAAGTTCACACGACACGCGGATAA
GAAAGACGCGAAGCACAAACCCACCATTTCGCAAGTCATCCGAAACCCCC
GCTATCGCCGCGCCCTCATCGTCGGCATCGGCGTCGTGACCCTCCAACAA
ATCTCCGGTCAGCCTTCCGTCCTGTATTTTTGTAATGAGATACTGCGTGA
TTTCGGCCTTTCGGATTCTGCTACTCTCCTAGTGGGGCTTTTTAAGCTGA
TTGCGACCATGGGGACCGTGTTTACTGTCGATAGGTACGGACGACGCACC
CTGTTGCTGACAGGCATTGCTGTTATGTTGGTGGCCCTCGCATTGCTCAC
CACGGCCTTTGCCTTCGATAAAGAGGACGAAGTAGAGGCGACTGGACAAG
CGTTAGATATCCTCTTAATCGGCGCGCTCTTCCTTTATATCGCCGGCTAC
CAAATCGGCTTCGGACCCATTTCTTGGATTCTCGTATCAGAAATCTACCC
AACGGAAGTACGGGGAGAGACCGTGGCCTTGGCTGTGATGGCAAATTTTG
CGTTTAATCTCGTAGTGACATTTGCGTTTGATTCCCTCAGGGAGTCTTTG
GGGACGAGTGCGACTTTTGGGTTGTTTCTGGGGATAGCAGCGGGGGGATG
GGCTTTTGTTTATGTATTGTTGCCGGAAACAAATGGATTAAGTCTAGAGA
TGATTGAGGCAAAGTTCGCTGCGTCTGCTTTGTCCCCTTTCTCCCGGTGG
TCTCGTGGTGGCCGTGTGGATGAGGTAGGGGGGAGGGGAGATGAGAGAGA
GGGTCTGTTGGCTTGGTTTCACCGGAGGGTGTGCGCCACGTCGGGGCGGG
AACAGCAGCAACAGCAGCAGCAGCCAGCAGCGGTGGTGGCAGCAGCCGCA
GGAGCTGGAGGAGGGGCTACGCAGATGTTTATTGAGAGCTTGCTGCCGGT
GGAGAAGCTACAACAACAACAACAACAGCAGTAGCAGCAGTAGCAGCAGT
AGCAGCAGCAGTAGCAGCAGGGGTTCAGTCGCAACTCACCCTGTCTTCTG
TTGTCATTGAAGGAGCGATTGTAGACGCCGTCTTGTCCAGATCTCCATGG
TGGGGAAAACGCTGACGTCGACGACAGCAGATGCGATTTGGTGTAAATTT
AGAAGTGAACGTTTGTTGATTAAGAAGGGGAAAGAATAATTTAGTTGGGG
GGCGTGCACAGGGAGAAAAAAACAAAGATATTTATAAGGCCAGGGATGTA
AAGAGAGAGAGACTCGTAAGAAAGTGTACAGAAATGATTGAATGAGCTGA
AGGCGCAACGGCCAAAAAGCAAGCCTCAAATCGGCCAGCAAATTACACAT
GCA
back to top

protein sequence of NO08G03200.1

>NO08G03200.1-protein ID=NO08G03200.1-protein|Name=NO08G03200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=608bp
MPWPSVCTGAASAGARTGAVASIFIFCALGGLLFGWDIGATAYVLTQVQS
ADKAGVAWGERIEANSALRGFFTASAVGGALVGTMIVLQVESWLGRRREL
LLASCLYMLGGMTEFGSSFVSNDVGLAICLPGRWVYGGGIAFAMHAAPAY
LAEMSPPSIRGLLVAAKEGMIVLGILFAQIAGFHFQDAEGGWRWTFFLSV
PLAALMGAGMLRLPPSARWLALQGRWEEAEASLRFFMKCGVGLAMEEIKA
SMVLEDVRLREGGEEEGREEGGSGARNQSSSSSSSSNEKKFTRHADKKDA
KHKPTISQVIRNPRYRRALIVGIGVVTLQQISGQPSVLYFCNEILRDFGL
SDSATLLVGLFKLIATMGTVFTVDRYGRRTLLLTGIAVMLVALALLTTAF
AFDKEDEVEATGQALDILLIGALFLYIAGYQIGFGPISWILVSEIYPTEV
RGETVALAVMANFAFNLVVTFAFDSLRESLGTSATFGLFLGIAAGGWAFV
YVLLPETNGLSLEMIEAKFAASALSPFSRWSRGGRVDEVGGRGDEREGLL
AWFHRRVCATSGREQQQQQQQPAAVVAAAAGAGGGATQMFIESLLPVEKL
QQQQQQQ*
back to top
Synonyms
Publications