NO08G02960, NO08G02960 (gene) Nannochloropsis oceanica

Overview
NameNO08G02960
Unique NameNO08G02960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1863
Alignment locationchr8:825525..827387 +

Link to JBrowse

Properties
Property NameValue
DescriptionTh1-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:825525..827387 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045892negative regulation of transcription, DNA-templated
GO:0045892negative regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR006942TH1
Homology
BLAST of NO08G02960 vs. NCBI_GenBank
Match: EWM26599.1 (th1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 704.9 bits (1818), Expect = 2.200e-199
Identity = 397/609 (65.19%), Postives = 450/609 (73.89%), Query Frame = 0
Query:    1 MNFIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTRKFRRIRQELERGSWEAAER---AGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVASTALFDGSVDREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKSSLDDGHQEALLRFIETVCAEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLDPAMRKGLRLVYSHMLKK 607
            M FID+MM ++ WRRTLMEIFA HKESKLLGGYCMQHLSR GHNTEMADLVSV+DYWSVARGV+TELL +VPWADHV L RL   L RICC TAYLH+FSQ+VL  +E  L+       +        Q L+A  R+FRRIRQELE  +WEAAE+   A G   G     R RFVHRLSAWQAEA P+N  E+ DPM+A E R+R++  ++ +FSEG L+D   A LL+ YVD+++LF ER KE               XXXXXXXXXXXXX+A+++GPLA+LRHP+LL+ LV+AIFDPK RL+T +RRASACQ+L VASTAL DGSVDREEADALY GLR+AS LLADEEML WNM TS +PP LKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVM V MRLLQFLV ERPLHHPAIFEAL+ALLTLKPTESSFNIIKMKRQALQC VFLMS GFVLPV+AFFH+ L EMDHALVR F+G+TLVAAQPPYS VFA ALASLLRE VV KAL+SSLD+  + AL++FIETVC  +                                                LLDPAMRKGLRLVYS MLKK
Sbjct:   58 MVFIDDMMGYRRWRRTLMEIFAQHKESKLLGGYCMQHLSRTGHNTEMADLVSVEDYWSVARGVVTELLAEVPWADHVHLSRLSANLKRICCSTAYLHAFSQDVLWGLESKLLVRADASRDTS-NISTAQGLMAANRRFRRIRQELESAAWEAAEQGIGAAGASQGGSWYNRCRFVHRLSAWQAEAPPLNLTEEDDPMEAVEKRRRVVDMLVVLFSEGRLTDVAAATLLETYVDANILFTER-KEARTGAGEIPGSTTGEXXXXXXXXXXXXXIAQIRGPLAFLRHPRLLEVLVRAIFDPKDRLDTETRRASACQVLAVASTALEDGSVDREEADALYGGLRQASALLADEEMLRWNMCTSGMPPVLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMHVFMRLLQFLVLERPLHHPAIFEALEALLTLKPTESSFNIIKMKRQALQCCVFLMSHGFVLPVVAFFHENLAEMDHALVRHFLGLTLVAAQPPYSSVFACALASLLRETVVSKALRSSLDEAPKRALVKFIETVCEND--------------------TEAKSNGDYKQLQDIPGLSDGPAASKSMLLDPAMRKGLRLVYSDMLKK 644          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: XP_009523672.1 (hypothetical protein PHYSODRAFT_497217 [Phytophthora sojae] >EGZ20955.1 hypothetical protein PHYSODRAFT_497217 [Phytophthora sojae])

HSP 1 Score: 151.4 bits (381), Expect = 9.400e-33
Identity = 128/528 (24.24%), Postives = 228/528 (43.18%), Query Frame = 0
Query:    3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTRKFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVAST--------ALFDGSVDREEAD-----ALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKS 518
            ++ +M+  + WR  L+E+   HK   LL  Y ++ +S AG++ E+A + S + ++SV  GVL +   ++P+A+  ++   +  L ++CC +++ + ++QE+L  ++  L      + + G +      +  +  K  R+R EL+    E A    G       + R R+++                        +   +   AIL +      S+          + +  L KE                                 +K   P+ +LR P +L AL+  +F+    ++ A  +     +   AST            GS D  E D     +  + L EAS +   +  L +NM+ S +   L  ++   PVV+MG LHWL V +  P F +S   +     L+R+L+  +       P  F  L   L L P  +    +++KR+ L+C VF+++ G+VLPVL F      E+D AL+R F+ +      PP+SP F+ AL  +L    V+ A+KS
Sbjct:  365 WLTQMLNDRKWRLMLIELAETHKTCTLL-QYAIRRISEAGYHKEIASITSANAFFSVFSGVLVDAFSRIPFANEEEVVEDIAALNKVCCQSSHSYVYAQELLCSMDDKLYT---MQRDAGADSAEYSHIRMVRSKLNRVRGELQ----ETASGRFGAKIVPFHILRRRYIY------------------------DANPKFCDAILSIVKSKTCSE----------LSAETLAKE------------------------------FQTSKAPPPVVHLRDPMVLSALLDRLFNRSDSISPAFVQNCVFLLAYAASTKDERSLLQTGVQGSSDHVEVDDDGVESTKKALVEASAICKSDHTLGYNMNQSGVVDRLISVMSV-PVVSMGVLHWLEVILTSPGFFSSTPLHICFPSLLRILKASIKLHVAQWPIAFSVLVTSLRLHPDINPVKALELKRETLRCMVFMITSGYVLPVLEFVFTNTLELDQALLRNFITMLFSRIAPPFSPKFSVALTKILTHPKVQTAIKS 819          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: OQS02908.1 (hypothetical protein THRCLA_04779 [Thraustotheca clavata])

HSP 1 Score: 151.4 bits (381), Expect = 9.400e-33
Identity = 139/541 (25.69%), Postives = 236/541 (43.62%), Query Frame = 0
Query:    2 NFIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTRKFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVASTALFD-----------GSVDREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKSSLDDG----HQEAL 528
            +++  M+  + WR  L+E+   H    LL  Y ++ +S AGH+ E+A + + + ++SV   ++T++L ++P A   +    +  L ++C   AY + ++QEVL ++++ L ++             ++    +  K   +RQEL     E           K  + + R  H L      AA         PM A                  GLS   +++ L  +VD  ++ ++RK                               A    P+A+LR   +L++L  A+F P + + T S RAS   IL  A++A+ D            S +    + + + L+EAS +   E  L++NM  S     L   + + PVV+MG LHWL   ++   F+N    +    V ++L++  +    +  P +F  L   L  +P  +   ++++KR+ L+C V LM+ G+VLPVL F    L  +D AL+R FV +      PPYS  F      +L    V  ALKS   D     HQ AL
Sbjct:  844 SWLKSMLQDQKWRMMLIELAEKHSSCGLL-QYAIRRISEAGHHKEIASITNANVFFSVFNAIVTDILQRIPTASVDEAREDLTALQKMCNHAAYSYIYTQEVLLQLDMRLQDD-------------DEQTKILRSKIDHLRQELHTSVIE-----------KHGIRKVRAFHVLKRANISAA--------FPMLA---------------EATGLSKIPMSITLQ-WVD--MMLRDRKCTAPCAELLKQVYE-----------------APSPPPVAHLREQLVLESLTDALFHPFESI-TESHRASCAYILAYAASAVDDRSLLDTTPHNSSSFELPSLEPITKALQEASLVCKSETTLSYNMHESEAVDKLVKTMDS-PVVSMGVLHWLGRLLESKSFYNGPFLHACFPVFLKLMRHGIELHTVQWPIVFNVLIKALMCQPESNPVKVLELKRETLRCMVHLMTCGYVLPVLHFIQNKLDSLDQALLRNFVQLVKSRISPPYSSRFLIEWTKILVHPKVLLALKSCPSDTKAKLHQFAL 1314          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: XP_024582081.1 (th1 family protein [Plasmopara halstedii] >CEG45712.1 th1 family protein [Plasmopara halstedii])

HSP 1 Score: 149.8 bits (377), Expect = 2.700e-32
Identity = 132/549 (24.04%), Postives = 236/549 (42.99%), Query Frame = 0
Query:    3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTR-KFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVAST--------ALFDGS-----VDREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKSSLDDGHQEALLRFIETVCAE 538
            ++ +M++ + WR  L+E+   HK   LL  Y ++ +S AGH+ E+A + S + ++ V  GVL +   ++P+A   ++   +  L ++CC +++ + ++QE+L  ++    +++    +  +    E + + M R K  R+  EL+    E A    G       + R R+++                        +       AIL +      S+ +   L   Y                                         ++K   P+A+LR   +L +L+  +F+P   + +A  +     +   AST           +GS     VD E  +   + L EAS +   +  L +NM+ S +   L  ++   PVV+MG LHWL V +  P F +S   +     L+R+L+  +       P  F  L   L L P  +    +++KR+ L C VF+++ G+VLPVL F      E+D AL+R F+ +  V   PPYS  FA AL  +L    V+ A+K+   +   +  L+   T CA+
Sbjct:  323 WLTQMLSDRKWRLMLIELAETHKTCTLL-QYAIRRISEAGHHKEIASITSANAFFPVFNGVLVDAFSRIPFATEEEVVEDLAALKKVCCQSSHSYLYAQELLCSMD----DKLYSIQKDMKATSNEYTHIRMVRSKLNRVHSELQ----ETASGRFGAKIVPYHILRRRYIY------------------------DKNSEFCDAILSIIKTKKCSELSAQALAKEY----------------------------------------QMSKDPPPVAHLRDTMVLSSLLDRLFNPSDLITSAFIQNCVFLLAYAASTKDERSLLQTGVEGSSKQVQVDNESVETTKKALIEASAICKSDHTLGYNMNQSGVVDKLISVMSV-PVVSMGVLHWLEVILTSPGFFSSTPLHICFPSLLRILKESIKLHSAQWPIAFGVLVTSLRLHPDINPVKALELKRETLGCMVFMITNGYVLPVLEFIFTNTLELDQALLRNFITMLFVRIAPPYSQKFALALTRILTHPKVQTAIKTCPRESKMK--LQGFVTYCAK 795          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: XP_002908372.1 (negative elongation factor, putative [Phytophthora infestans T30-4] >EEY61455.1 negative elongation factor, putative [Phytophthora infestans T30-4])

HSP 1 Score: 149.4 bits (376), Expect = 3.600e-32
Identity = 127/529 (24.01%), Postives = 229/529 (43.29%), Query Frame = 0
Query:    3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTR-KFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVAST--------ALFDGSVDREEAD-----ALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKS 518
            ++ +M++ + WR  L+E+   HK   LL  Y ++ +S AGH+ E+A + S + ++ V  GVL +   ++P+A+  ++   +  L ++CC +++ + ++QE+L  ++    +++    +       E + + M R K  R+  EL+    E A    G       + R R+++                        +   +   AIL +      S+ +   L   Y  S                                        K   P+A+LR P +L +L+  +F+P   ++ A  +     +   AST            GS D+ E D     +  + L EAS +   +  + +NM+ S +   L  ++   PVV+MG LHWL V +  P   +S   +     L+R+L+  +       P  F  L   L L P  +    +++KR+ L+C VF+++ G+VLPVL F      E+D AL+R F+ +      PP+SP F+ AL  +L    V+ A+KS
Sbjct:  331 WLTQMLSDRKWRLMLIELAETHKTCTLL-QYAIRRISEAGHHKEIASITSANAFFPVFSGVLVDAFSRIPFANEEEMVEDIAALKKVCCQSSHSYVYAQELLCSMD----DKLYLMQKDADATSAEYTHIRMVRSKLNRVHGELQ----ETASTRFGAKIVPFHILRRRYIY------------------------DANTKFCDAILSIVKTKKCSELSAEALAKEYQTS----------------------------------------KTPPPVAHLRDPMVLSSLLDRLFNPSDSISPAFVQNCVFLLAYAASTKDDRSLLQTGVQGSSDQVEVDDDGVESTKKALVEASAICKSDHTIGYNMNQSGVVDKLISVMSV-PVVSMGVLHWLEVILTSPGLFSSTPLHICFPSLLRILKASIKLHVAQWPISFGVLVTSLRLHPDVNPVKALELKRETLRCMVFMITSGYVLPVLEFVFTNTLELDQALLRNFITMLFARIAPPFSPKFSVALTKILTHPKVQTAIKS 785          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: ETI56327.1 (hypothetical protein F443_01077 [Phytophthora parasitica P1569] >ETL49528.1 hypothetical protein L916_00999 [Phytophthora parasitica] >ETM02585.1 hypothetical protein L917_00966 [Phytophthora parasitica] >ETM55835.1 hypothetical protein L914_01006 [Phytophthora parasitica] >ETO85056.1 hypothetical protein F444_01083 [Phytophthora parasitica P1976] >ETP54160.1 hypothetical protein F442_01022 [Phytophthora parasitica P10297])

HSP 1 Score: 148.7 bits (374), Expect = 6.100e-32
Identity = 128/529 (24.20%), Postives = 229/529 (43.29%), Query Frame = 0
Query:    3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTR-KFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVAST-----ALFDG--------SVDREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKS 518
            ++ +M+  + WR  L+E+   HK   LL  Y ++ +S AGH+ E+A + S + ++ V  GVL +   ++P+A+  ++   +  L ++CC +++ + ++QE+L  ++    +++    +       E + + M R K  R+  EL+    E A    G       + R R+++                        +   +   AIL +       + +  VL   Y  S                                        K   P+A+LR P +L +L+  +F+P   ++ A  +     +   AST      L  G         VD +  ++  + L EAS +   +  L +NM+ S +   L  ++   PVV+MG LHWL V +  P F +S   +     L+R+L+  +       P  F  L   L L P  +    +++KR+ L+C VF+++ G+VLPVL F      E+D AL+R F+ +      PP+SP F+ AL  +L    V+ A+KS
Sbjct:  329 WLTQMLNDRKWRLMLIELAETHKTCTLL-QYAIRRISEAGHHKEIASITSANAFFPVFSGVLLDAFSRIPFANEEEVVEDIAALKKVCCQSSHSYVYAQELLCSMD----DKLYLMQKDAVVTSAEYTHIRMVRSKLNRVHGELQ----ETASSRFGAKIVPFHILRRRYIY------------------------DSNSKFCDAILSIVKTKKCLELSAEVLAKEYQTS----------------------------------------KTPPPVAHLRDPMVLSSLLDRLFNPSDSISPAFVQNCVFLLAYAASTKDERSLLQTGVQGSSNQVEVDDDGVESTKKALVEASAICKSDHTLGYNMNQSGVVDKLISVMSV-PVVSMGVLHWLEVLLTSPGFFSSTPLHICFPSLLRILKASIKLHVAQWPISFGVLVTSLRLHPDVNPVKALELKRETLRCMVFMITSGYVLPVLEFVFTNTLELDQALLRNFITMLFARIAPPFSPKFSVALTKILTHPKVQTAIKS 783          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: ETK96152.1 (hypothetical protein L915_01016 [Phytophthora parasitica] >ETP26163.1 hypothetical protein F441_01050 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 148.7 bits (374), Expect = 6.100e-32
Identity = 128/529 (24.20%), Postives = 229/529 (43.29%), Query Frame = 0
Query:    3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTR-KFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVAST-----ALFDG--------SVDREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKS 518
            ++ +M+  + WR  L+E+   HK   LL  Y ++ +S AGH+ E+A + S + ++ V  GVL +   ++P+A+  ++   +  L ++CC +++ + ++QE+L  ++    +++    +       E + + M R K  R+  EL+    E A    G       + R R+++                        +   +   AIL +       + +  VL   Y  S                                        K   P+A+LR P +L +L+  +F+P   ++ A  +     +   AST      L  G         VD +  ++  + L EAS +   +  L +NM+ S +   L  ++   PVV+MG LHWL V +  P F +S   +     L+R+L+  +       P  F  L   L L P  +    +++KR+ L+C VF+++ G+VLPVL F      E+D AL+R F+ +      PP+SP F+ AL  +L    V+ A+KS
Sbjct:  328 WLTQMLNDRKWRLMLIELAETHKTCTLL-QYAIRRISEAGHHKEIASITSANAFFPVFSGVLLDAFSRIPFANEEEVVEDIAALKKVCCQSSHSYVYAQELLCSMD----DKLYLMQKDAVVTSAEYTHIRMVRSKLNRVHGELQ----ETASSRFGAKIVPFHILRRRYIY------------------------DSNSKFCDAILSIVKTKKCLELSAEVLAKEYQTS----------------------------------------KTPPPVAHLRDPMVLSSLLDRLFNPSDSISPAFVQNCVFLLAYAASTKDERSLLQTGVQGSSNQVEVDDDGVESTKKALVEASAICKSDHTLGYNMNQSGVVDKLISVMSV-PVVSMGVLHWLEVLLTSPGFFSSTPLHICFPSLLRILKASIKLHVAQWPISFGVLVTSLRLHPDVNPVKALELKRETLRCMVFMITSGYVLPVLEFVFTNTLELDQALLRNFITMLFARIAPPFSPKFSVALTKILTHPKVQTAIKS 782          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: XP_008890736.1 (hypothetical protein PPTG_00914 [Phytophthora parasitica INRA-310] >ETN24692.1 hypothetical protein PPTG_00914 [Phytophthora parasitica INRA-310])

HSP 1 Score: 148.7 bits (374), Expect = 6.100e-32
Identity = 128/529 (24.20%), Postives = 229/529 (43.29%), Query Frame = 0
Query:    3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTR-KFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVAST-----ALFDG--------SVDREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKS 518
            ++ +M+  + WR  L+E+   HK   LL  Y ++ +S AGH+ E+A + S + ++ V  GVL +   ++P+A+  ++   +  L ++CC +++ + ++QE+L  ++    +++    +       E + + M R K  R+  EL+    E A    G       + R R+++                        +   +   AIL +       + +  VL   Y  S                                        K   P+A+LR P +L +L+  +F+P   ++ A  +     +   AST      L  G         VD +  ++  + L EAS +   +  L +NM+ S +   L  ++   PVV+MG LHWL V +  P F +S   +     L+R+L+  +       P  F  L   L L P  +    +++KR+ L+C VF+++ G+VLPVL F      E+D AL+R F+ +      PP+SP F+ AL  +L    V+ A+KS
Sbjct:  329 WLTQMLNDRKWRLMLIELAETHKTCTLL-QYAIRRISEAGHHKEIASITSANAFFPVFSGVLLDAFSRIPFANEEEVVEDIAALKKVCCQSSHSYVYAQELLCSMD----DKLYLMQKDAVVTSAEYTHIRMVRSKLNRVHGELQ----ETASSRFGAKIVPFHILRRRYIY------------------------DSNSKFCDAILSIVKTKKCLELSAEVLAKEYQTS----------------------------------------KTPPPVAHLRDPMVLSSLLDRLFNPSDSISPAFVQNCVFLLAYAASTKDERSLLQTGVQGSSNQVEVDDDGVESTKKALVEASAICKSDHTLGYNMNQSGVVDKLISVMSV-PVVSMGVLHWLEVLLTSPGFFSSTPLHICFPSLLRILKASIKLHVAQWPISFGVLVTSLRLHPDVNPVKALELKRETLRCMVFMITSGYVLPVLEFVFTNTLELDQALLRNFITMLFARIAPPFSPKFSVALTKILTHPKVQTAIKS 783          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: XP_012207212.1 (hypothetical protein SPRG_12055 [Saprolegnia parasitica CBS 223.65] >KDO22068.1 hypothetical protein SPRG_12055 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 144.4 bits (363), Expect = 1.200e-30
Identity = 138/548 (25.18%), Postives = 233/548 (42.52%), Query Frame = 0
Query:    3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTRKFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHPQLLDALVKAIFDPKKRLNTASRRASACQILTVASTALFDGSVDREEA---------DALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRA--HPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKSSLDDGHQEALLRFIETVCAEEG 540
            ++  M+  + WR  L+E+   H    LL  Y ++ +S AGH+ E+A + + + ++SV   ++T++L ++P A   +    +  L ++C   AY H ++QEVL +++  L  + G             + +A+  K  R+RQEL            G    K  V + +  H L   Q      + A+                AI  ++ E   S     +L   Y   S                                           P+A++R   +L+ L  A+F P + + T S R++   +L  A++ + D S+    A         +A+   L+E S +   E  L++NM  S    +++ +LR    PVVAMG LHWL   ++   F N    +    V ++LL+  +       P +F  L   L  +P  +   ++++KR+ L+C V LM+ G+VLPVL F  Q    +D AL+R FV + L    PP+S  F     ++L    V  ALKS   D   +A L+     CA+ G
Sbjct:  336 WLKAMLQDQQWRLMLIELAEKHSTCGLL-QYAIRRISEAGHHKEIASITNANVFFSVFNAIVTDMLQRMPSASVEEARDDLHALQKMCAHAAYSHVYTQEVLLQLDTHLRAQDG-------------AAMALRTKLDRLRQELH-----------GSVLAKHGVRKVQAFHVLKRAQLTQTFPDLAQ----------------AIDMLYRERKCSAACAELLKHVYAQPS-----------------------------------------PPPVAHVREHLVLEYLTDALFHPYESI-TESHRSACAHVLAYAASVVDDRSLLDTHAISAQACPPFEAIATALQETSVVCKSETTLSYNMHESE---AIEKVLRTMETPVVAMGVLHWLGRLLESKSFLNGPFLHACFPVFLKLLRHDIELHMAQWPTVFNVLVKALMCQPESNPVKVLELKRETLRCMVHLMTVGYVLPVLHFISQSTDALDQALLRNFVQLVLSRIAPPFSERFVTEWTTVLVHPKVLLALKSCPTD--TKAKLQQYAVYCADLG 795          
BLAST of NO08G02960 vs. NCBI_GenBank
Match: GAY02632.1 (negative elongation factor, putative [Pythium insidiosum])

HSP 1 Score: 142.5 bits (358), Expect = 4.400e-30
Identity = 130/540 (24.07%), Postives = 240/540 (44.44%), Query Frame = 0
Query:    3 FIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADLVSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFSQEVLREVEVALMEEVGREGEGGREEGREQSLVAMTRKFRRIRQELERGSWEAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGRKRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVKGPLAYLRHP----------QLLDALVKAIFDPKKRLNTASRRASACQILTVASTALFDGSV---------------DREEADALYQGLREASTLLADEEMLTWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMRVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQCFVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFARALASLLREMVVRKALKS 518
            ++ +M++ +  R  L+E+   HK       Y ++ +S AGH+ E+A + + + ++SV  G+L +   ++P++   D    +  L +ICC +AY   +++E+L  ++  L    G + E G E+      V++   +R +R +L R  ++            +     +F   + A+              P+     R+R L  +   FS+  LS        ++  D  VL KE +                                +   P+A+LR+P           +  +L+  +F+P   L T +  A+   +L  A+ A  + S+               D  E +     L+EAST+   +  L++NMS+S +   L G +   P+ ++G LHW+ VT++ P F+NS   N     L+R+L+  +       P  F  L   L + P  +    +++KR++L+C VF+++ G+VLPVL F      ++D +L+R F+ + +    PPYS  F  AL  +L    V+ A+KS
Sbjct:  402 WLSDMLSDRKSRLMLIELAEKHK-------YAVRRISGAGHHKELASIATANAFFSVFNGILLDAFCRIPFSSDDDAQEDLAALQKICCHSAYSFVYAEELLDTLDHKL---AGLQDEVGVEQ------VSVRAHYRMVRSKLSRVRFDL-----------QATAIDKFGPLVEAFH-------------PL-----RRRSLMDLNPKFSQAILSIVKSRHCSESAAD--VLVKEYRS------------------------------PETAPPVAHLRNPLVSSATVMKNNIFRSLLDPMFNPALPL-TEAHAANCIHLLGYAACAKDERSILRSSTAPASKNTVSLDIGELEKTKLALQEASTVCRSDHTLSYNMSSSGVFEKL-GEVMEVPLASIGVLHWVEVTLRSPTFYNSSLLNVCFPSLLRILKGSIRRHVSQWPIAFRVLVVALRMHPDINPVKALELKRESLRCMVFMITSGYVLPVLEFILSNTVDLDQSLLRSFITLLMAQIAPPYSAKFVLALTKILTHPKVQSAIKS 862          
The following BLAST results are available for this feature:
BLAST of NO08G02960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26599.12.200e-19965.19th1-like protein [Nannochloropsis gaditana][more]
XP_009523672.19.400e-3324.24hypothetical protein PHYSODRAFT_497217 [Phytophtho... [more]
OQS02908.19.400e-3325.69hypothetical protein THRCLA_04779 [Thraustotheca c... [more]
XP_024582081.12.700e-3224.04th1 family protein [Plasmopara halstedii] >CEG4571... [more]
XP_002908372.13.600e-3224.01negative elongation factor, putative [Phytophthora... [more]
ETI56327.16.100e-3224.20hypothetical protein F443_01077 [Phytophthora para... [more]
ETK96152.16.100e-3224.20hypothetical protein L915_01016 [Phytophthora para... [more]
XP_008890736.16.100e-3224.20hypothetical protein PPTG_00914 [Phytophthora para... [more]
XP_012207212.11.200e-3025.18hypothetical protein SPRG_12055 [Saprolegnia paras... [more]
GAY02632.14.400e-3024.07negative elongation factor, putative [Pythium insi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02960.1NO08G02960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100001g204gene3773Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02960.1NO08G02960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02960 ID=NO08G02960|Name=NO08G02960|organism=Nannochloropsis oceanica|type=gene|length=1863bp
ATGAATTTTATCGATGAGATGATGACTTGGAAGGGGTGGAGACGGACGTT
GATGGAGATTTTTGCGGCACACAAAGAGAGCAAGCTGCTGGGAGGGTACT
GCATGCAGCATTTGAGCAGGGCGGGCCATAACACAGAGATGGCGGACTTG
GTGAGCGTGGATGACTATTGGAGTGTCGCGAGGGGGGTCTTGACCGAATT
GTTGTTACAAGTGCCTTGGGCGGATCACGTGGATTTGGGGAGGTTGGTGG
GCACTCTGACGCGAATATGCTGCGGGACGGCGTATTTACATTCGTTCAGT
CAGGAGGTCCTGAGGGAGGTGGAGGTGGCGTTGATGGAGGAAGTGGGGAG
GGAAGGCGAGGGAGGGAGGGAAGAAGGGAGGGAGCAGAGTTTGGTGGCGA
TGACGAGGAAGTTCCGGCGGATTCGGCAGGAGTTGGAGAGGGGGAGCTGG
GAAGCGGCGGAAAGGGCGGGTGGAGGGGGGAGTGGGAAGGAGAGGGTAGG
TAGAAGTCGGTTCGTGCATCGATTGAGTGCGTGGCAGGCAGAGGCAGCGC
CAGTGAATTCGGCAGAGAAAGGGGACCCGATGAAAGCGAGGGAGGGAAGG
AAAAGATTGCTGGGAGCAATATTGGACGTGTTCAGTGAGGGGGGATTGTC
GGACCACACATTGGCAGTATTGCTTGATGCGTATGTCGACTCATCCGTTT
TGTTCAAGGAGAGAAAGAAGGAGGGGGAAGGGAAGGAGGACAAGGAAGGG
GAGGAGGGTAAGTGGGAGGACGGTGACGAAAACGACGATGACGACGATGA
TGATGGGCTTGCCAAGGTGAAGGGTCCACTGGCCTACCTCCGCCATCCTC
AACTTCTCGATGCGTTGGTCAAAGCCATTTTTGACCCAAAAAAGAGGCTG
AACACTGCCTCTCGCCGAGCCTCGGCCTGCCAGATCTTGACCGTGGCAAG
CACGGCGTTGTTTGACGGCAGTGTGGACCGCGAGGAGGCTGATGCCCTTT
ACCAGGGCCTGAGGGAAGCGTCGACCTTACTGGCAGACGAAGAGATGCTG
ACGTGGAACATGAGTACGTCCAGCATACCCCCTTCCTTGAAAGGCCTGTT
GAGAGCCCACCCTGTGGTGGCCATGGGTTTCTTGCATTGGTTAAGGGTCA
CGATCCAAGACCCGGAGTTTCACAACTCGCGGCAATTCAACGAGGTGATG
AGAGTGCTCATGCGCTTATTGCAATTTTTGGTGAGTGAGCGACCATTGCA
CCACCCGGCGATTTTCGAGGCCCTAAAGGCGCTGTTGACCTTGAAGCCGA
CAGAAAGCTCGTTCAATATCATCAAGATGAAGAGGCAAGCCTTGCAGTGT
TTTGTGTTTCTGATGTCTCGGGGCTTTGTATTGCCGGTGCTGGCGTTCTT
CCATCAGATCCTGCCGGAGATGGATCATGCATTGGTGAGGTTTTTTGTGG
GTGTGACGCTGGTGGCGGCGCAACCCCCTTATTCGCCGGTGTTTGCTCGG
GCGCTTGCATCCTTGTTGAGGGAGATGGTTGTGAGAAAGGCATTGAAATC
AAGTTTGGATGACGGGCATCAGGAGGCTTTGCTCAGGTTTATTGAGACGG
TGTGTGCGGAGGAGGGGGATGCGGAGGAAGAAAGGGGGGGGAAAGGGGAG
GAGGAGAGAGAGGAGAAGGAATTGTCGCCGGTGAAGAAGAAAGGAGGAGA
AGCAGATGGAGAGGAAGAAGTAGAAGGAGGAGGAGCGGCAGCCGCAGTAG
CAGCAAATTTGTTGGACCCGGCAATGAGAAAGGGCCTGAGGTTGGTGTAT
TCCCACATGTTGAAAAAAGAGAAGAGGAAAAGGAGACGGATGAATGGGGA
GGGCGAAGGATGA
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protein sequence of NO08G02960.1

>NO08G02960.1-protein ID=NO08G02960.1-protein|Name=NO08G02960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=621bp
MNFIDEMMTWKGWRRTLMEIFAAHKESKLLGGYCMQHLSRAGHNTEMADL
VSVDDYWSVARGVLTELLLQVPWADHVDLGRLVGTLTRICCGTAYLHSFS
QEVLREVEVALMEEVGREGEGGREEGREQSLVAMTRKFRRIRQELERGSW
EAAERAGGGGSGKERVGRSRFVHRLSAWQAEAAPVNSAEKGDPMKAREGR
KRLLGAILDVFSEGGLSDHTLAVLLDAYVDSSVLFKERKKEGEGKEDKEG
EEGKWEDGDENDDDDDDDGLAKVKGPLAYLRHPQLLDALVKAIFDPKKRL
NTASRRASACQILTVASTALFDGSVDREEADALYQGLREASTLLADEEML
TWNMSTSSIPPSLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVM
RVLMRLLQFLVSERPLHHPAIFEALKALLTLKPTESSFNIIKMKRQALQC
FVFLMSRGFVLPVLAFFHQILPEMDHALVRFFVGVTLVAAQPPYSPVFAR
ALASLLREMVVRKALKSSLDDGHQEALLRFIETVCAEEGDAEEERGGKGE
EEREEKELSPVKKKGGEADGEEEVEGGGAAAAVAANLLDPAMRKGLRLVY
SHMLKKEKRKRRRMNGEGEG*
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Synonyms
Publications