NO08G02510, NO08G02510 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO08G02510 vs. NCBI_GenBank
Match: EWM27401.1 (pol polyprotein [Nannochloropsis gaditana]) HSP 1 Score: 156.8 bits (395), Expect = 5.000e-35 Identity = 77/136 (56.62%), Postives = 91/136 (66.91%), Query Frame = 0 Query: 4 ASSAKQQITCGTWPWCRLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFPEPNKG 140 +S+A+Q I RL AGLT P+K KFAR ET FLGF VS +GIK NPE +SAV +FP R +R VR+F+ LCSYYR F++GF IAGPL L C T RW W + Q AF+ LK AL PVLAF EPNKG Sbjct: 59 SSTAEQHIKDAATTLHRLFDAGLTAYPSKCKFARAETNFLGFIVSPEGIKPNPETISAVVDFPVPRGVRDVRSFLSLCSYYRRFVKGFPAIAGPLTKLLCKTQRWEWNEDQNRAFENLKAALTPPPVLAFQEPNKG 194
BLAST of NO08G02510 vs. NCBI_GenBank
Match: EGO03217.1 (hypothetical protein SERLA73DRAFT_24690, partial [Serpula lacrymans var. lacrymans S7.3]) HSP 1 Score: 124.0 bits (310), Expect = 3.600e-25 Identity = 59/119 (49.58%), Postives = 76/119 (63.87%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFPEPNK 139 RL L V P K F E FLG + ++GI+ NPE V A+ +P ++GVRAF+GL ++YR FIE F+ I PLNDLT WHWG ++ AFDKLKQA +AP+LAFPE +K Sbjct: 46 RLQERDLFVKPEKCNFKVKEVDFLGMIIGQNGIRMNPEKVQAILEWPEPTRVKGVRAFLGLGNFYRRFIENFAKITRPLNDLTKKDIVWHWGAREQEAFDKLKQAFTTAPILAFPELDK 164
BLAST of NO08G02510 vs. NCBI_GenBank
Match: KXJ16458.1 (Transposon Ty3-G Gag-Pol polyprotein [Exaiptasia pallida]) HSP 1 Score: 122.5 bits (306), Expect = 1.100e-24 Identity = 57/115 (49.57%), Postives = 79/115 (68.70%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFP 135 RL A L + P K FA +LG +S DG++ NP+ + AV FP +NL+GVR+F+GL +YYR F++GF+ IA PLN+LT + ++ W + + AFD LKQALISAP+LAFP Sbjct: 1339 RLRXANLCLKPTKCAFASPTIEYLGHIISADGVQPNPDKIKAVAEFPIPKNLKGVRSFLGLANYYRRFVQGFAKIAVPLNNLTRKSVKFQWTQECQTAFDTLKQALISAPILAFP 1453
BLAST of NO08G02510 vs. NCBI_GenBank
Match: KXJ21442.1 (Transposon Ty3-I Gag-Pol polyprotein [Exaiptasia pallida]) HSP 1 Score: 122.5 bits (306), Expect = 1.100e-24 Identity = 60/122 (49.18%), Postives = 82/122 (67.21%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFP--EPNKG 140 R+ AGL + P K +F + E FLG VS GIK +P+ V++VKN+P +++ ++ F+GL SYYR FI GFS IA PLN L +HWG++Q AF+KLK LI+APVLA+P +PN G Sbjct: 398 RIKIAGLKLKPEKCQFLKKEVKFLGHVVSSQGIKTDPDKVASVKNWPIPVDMKELQCFLGLASYYRRFIPGFSIIAEPLNRLCRKGVPFHWGESQASAFEKLKTRLINAPVLAYPNFQPNAG 519
BLAST of NO08G02510 vs. NCBI_GenBank
Match: GBC44946.1 (gag-pol fusion protein [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 122.1 bits (305), Expect = 1.400e-24 Identity = 59/119 (49.58%), Postives = 78/119 (65.55%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFPEPNK 139 RL AGL ++P K KFA E FLG +SKDGI+ +P +S VK+FP NL +R F+GL SYYR FI+ FS IA PLN L ++W AQ+ AF+ LK LIS+P+L +P+ N+ Sbjct: 1330 RLRDAGLKLNPEKCKFASTELAFLGHVISKDGIRTDPGKISKVKDFPRPTNLTQLRGFLGLASYYRRFIKDFSKIANPLNKLLKKNVPFNWTNAQQQAFEYLKNCLISSPILTYPQWNR 1448
BLAST of NO08G02510 vs. NCBI_GenBank
Match: GBC39316.1 (gag-pol fusion protein [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 122.1 bits (305), Expect = 1.400e-24 Identity = 59/119 (49.58%), Postives = 78/119 (65.55%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFPEPNK 139 RL AGL ++P K KFA E FLG +SKDGI+ +P +S VK+FP NL +R F+GL SYYR FI+ FS IA PLN L ++W AQ+ AF+ LK LIS+P+L +P+ N+ Sbjct: 1293 RLRDAGLKLNPEKCKFASTELAFLGHVISKDGIRTDPGKISKVKDFPRPTNLTQLRGFLGLASYYRRFIKDFSKIANPLNKLLKKNVPFNWTNAQQQAFEYLKNCLISSPILTYPQWNR 1411
BLAST of NO08G02510 vs. NCBI_GenBank
Match: GBC27599.1 (gag-pol fusion protein [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 122.1 bits (305), Expect = 1.400e-24 Identity = 59/119 (49.58%), Postives = 78/119 (65.55%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFPEPNK 139 RL AGL ++P K KFA E FLG +SKDGI+ +P +S VK+FP NL +R F+GL SYYR FI+ FS IA PLN L ++W AQ+ AF+ LK LIS+P+L +P+ N+ Sbjct: 1330 RLRDAGLKLNPEKCKFASTELAFLGHVISKDGIRTDPGKISKVKDFPRPTNLTQLRGFLGLASYYRRFIKDFSKIANPLNKLLKKNVPFNWTNAQQQAFEYLKNCLISSPILTYPQWNR 1448
BLAST of NO08G02510 vs. NCBI_GenBank
Match: KXJ28715.1 (Retrovirus-related Pol polyprotein from transposon 412 [Exaiptasia pallida]) HSP 1 Score: 121.7 bits (304), Expect = 1.800e-24 Identity = 60/122 (49.18%), Postives = 80/122 (65.57%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFP--EPNKG 140 R+ AGL + P K +F + E FLG VS GIK +P+ V+ VKN+P +++ ++ F+GL SYYR FI GFS IA PLN L +HWG++Q AF+KLK LI APVLA+P +PN G Sbjct: 186 RITIAGLKLKPEKYQFFKKEVKFLGHVVSSQGIKTDPDKVAFVKNWPIPVDVKELQRFLGLASYYRRFISGFSIIAEPLNHLCRKGVPFHWGESQASAFEKLKTRLIDAPVLAYPNFQPNAG 307
BLAST of NO08G02510 vs. NCBI_GenBank
Match: GBC53575.1 (retrotransposable element [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 121.7 bits (304), Expect = 1.800e-24 Identity = 59/119 (49.58%), Postives = 78/119 (65.55%), Query Frame = 0 Query: 20 RLIAAGLTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFPEPNK 139 RL AGL ++P K KFA E FLG +SKDGI+ +P +S VK+FP NL +R F+GL SYYR FI+ FS IA PLN L ++W AQ+ AF+ LK LIS+P+L +P+ N+ Sbjct: 101 RLRDAGLKLNPEKCKFASTELAFLGHVISKDGIRTDPGKISKVKDFPRPTNLTQLRGFLGLASYYRRFIKDFSKIANPLNKLLKKNIPFNWTNAQQQAFEYLKNCLISSPILTYPQWNR 219
BLAST of NO08G02510 vs. NCBI_GenBank
Match: EGO04037.1 (hypothetical protein SERLA73DRAFT_24689, partial [Serpula lacrymans var. lacrymans S7.3]) HSP 1 Score: 121.3 bits (303), Expect = 2.400e-24 Identity = 57/113 (50.44%), Postives = 75/113 (66.37%), Query Frame = 0 Query: 26 LTVSPAKRKFARYETTFLGFTVSKDGIKANPEAVSAVKNFPNTRNLRGVRAFVGLCSYYRCFIEGFSTIAGPLNDLTCNTTRWHWGKAQKGAFDKLKQALISAPVLAFPEPNK 139 L V P K F E FLG +S++GI+ +PE V A+ +P ++GVRAF+GL ++YR FIE F+ I PLNDLT WHWG ++ AFDKLKQA +AP+LAFPE +K Sbjct: 52 LFVKPEKCNFKVKEVDFLGMIISQNGIRMDPEKVQAILEWPEPTCVKGVRAFLGLGNFYRRFIENFAKITRPLNDLTKKDIVWHWGAKEQEAFDKLKQAFTTAPILAFPELDK 164 The following BLAST results are available for this feature:
BLAST of NO08G02510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G02510 ID=NO08G02510|Name=NO08G02510|organism=Nannochloropsis oceanica|type=gene|length=420bpback to top protein sequence of NO08G02510.1 >NO08G02510.1-protein ID=NO08G02510.1-protein|Name=NO08G02510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=140bpback to top Synonyms
Publications
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