NO08G02490, NO08G02490 (gene) Nannochloropsis oceanica

Overview
NameNO08G02490
Unique NameNO08G02490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1831
Alignment locationchr8:717068..718898 +

Link to JBrowse

Properties
Property NameValue
DescriptionC2h2-type zinc finger-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:717068..718898 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2/integrase_DNA-bd
Homology
BLAST of NO08G02490 vs. NCBI_GenBank
Match: XP_005856157.1 (c2h2-type zinc finger-containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU20202.1 c2h2-type zinc finger-containing protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 490.3 bits (1261), Expect = 6.200e-135
Identity = 262/460 (56.96%), Postives = 309/460 (67.17%), Query Frame = 0
Query:    1 MDLLKCQTCGLGFDSSVAHKEHYRMELHRYNLKRRTNDLGPVSETEYQRRKAAAQSLAGMSKSTTEAFHAKCHLCNRSFASKATLSQHLKSRKHLTMAEGDNGGTPTKVKATVAPSTPTTIKVPGSMDEAAMDEASNKAG-EEEGGAAAPVDLSPEVCIFCNERCPSVESTVLHMWKQHGFHLPDGEYLVDVHGLLRYCAEKVKVGCLCLYCNGKGKGFLTARDVQRHMHSKSHCKLLYEEGEDLHEFRLFYDFSASHALPPCSKKMTRGKFKAQEDG----------MDDDEQSLETVDSDYEEVSGDGDXXXXXXXXXXXXXXXXXXXXXLRQMALQVSELGELMLPDGRCLGRREYQRYYKQRYRPEDVRSSLVASKHESAGRLWPGMESNAVVKAGGTGSLMVRGGAGGEGLWGPDKAARKAVMKVTAAARRVHDKYRLRKEISTNKFHKRPQIDG 450
            M+LLKCQTCGLGF+SS AHK+HYR ELHRYN KRRTN+LGPVSE +YQRRKAAAQSL G   S +  FH KC +CNR+FASKATL QHLKSRKH   A      T T  K+ +       +   G        E  +++G  EE     P DL PEVCIFCN R  +VES +LHMWKQHGFHLPDGE+LVD+HGLLRYCAEKVK+GC+CLYCNGKGK FL+ RD Q HM +KSHCKLLYEEGEDLHEFR FYDFSAS+ +    ++    +    + G          +DDD+ SLETVDS YEE+S  G                          A++VS LGEL+LPDGR LG RE  RYYKQ YRPED R +L+ASK E AGR+  G   +A+V+ G   ++  R G   EG+   D+AAR+AVMKVTAA RR  +KYRLR+EISTNKFHKRPQIDG
Sbjct:   19 MELLKCQTCGLGFNSSSAHKDHYRSELHRYNSKRRTNELGPVSEHDYQRRKAAAQSLTGSEGSASHGFHGKCQVCNRTFASKATLQQHLKSRKH---AYATERSTQTTSKSEIVSEGGVVMAALGG------SERKDRSGTTEEDDTVGPADLDPEVCIFCNRRYFTVESAILHMWKQHGFHLPDGEFLVDLHGLLRYCAEKVKIGCMCLYCNGKGKSFLSPRDAQHHMEAKSHCKLLYEEGEDLHEFRPFYDFSASYQVLDSRRRYQEEEKMTDKTGPKSSGIDLGAVDDDDMSLETVDSAYEELSDGG--GMTTMDDGGNVGKGGEMEQIFDHAAMRVSHLGELVLPDGRSLGCRENNRYYKQYYRPEDTRVALIASKQEKAGRMASGSHDSAMVRTGNNTNVAYRSGVSREGMLENDRAARRAVMKVTAAVRRTCEKYRLRREISTNKFHKRPQIDG 467          
BLAST of NO08G02490 vs. NCBI_GenBank
Match: EWM26755.1 (c2h2-type zinc finger-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 490.0 bits (1260), Expect = 8.100e-135
Identity = 262/460 (56.96%), Postives = 309/460 (67.17%), Query Frame = 0
Query:    1 MDLLKCQTCGLGFDSSVAHKEHYRMELHRYNLKRRTNDLGPVSETEYQRRKAAAQSLAGMSKSTTEAFHAKCHLCNRSFASKATLSQHLKSRKHLTMAEGDNGGTPTKVKATVAPSTPTTIKVPGSMDEAAMDEASNKAG-EEEGGAAAPVDLSPEVCIFCNERCPSVESTVLHMWKQHGFHLPDGEYLVDVHGLLRYCAEKVKVGCLCLYCNGKGKGFLTARDVQRHMHSKSHCKLLYEEGEDLHEFRLFYDFSASHALPPCSKKMTRGKFKAQEDG----------MDDDEQSLETVDSDYEEVSGDGDXXXXXXXXXXXXXXXXXXXXXLRQMALQVSELGELMLPDGRCLGRREYQRYYKQRYRPEDVRSSLVASKHESAGRLWPGMESNAVVKAGGTGSLMVRGGAGGEGLWGPDKAARKAVMKVTAAARRVHDKYRLRKEISTNKFHKRPQIDG 450
            M+LLKCQTCGLGF+SS AHK+HYR ELHRYN KRRTN+LGPVSE +YQRRKAAAQSL G   S +  FH KC +CNR+FASKATL QHLKSRKH   A      T T  K+ +       +   G        E  +++G  EE     P DL PEVCIFCN R  +VES +LHMWKQHGFHLPDGE+LVD+HGLLRYCAEKVK+GC+CLYCNGKGK FL+ RD Q HM +KSHCKLLYEEGEDLHEFR FYDFSAS+ +    ++    +    + G          +DDD+ SLETVDS YEE+S  G                          A++VS LGEL+LPDGR LG RE  RYYKQ YRPED R +L+ASK E AGR+  G   +A+V+ G   ++  R G   EG+   D+AAR+AVMKVTAA RR  +KYRLR+EISTNKFHKRPQIDG
Sbjct:    1 MELLKCQTCGLGFNSSSAHKDHYRSELHRYNSKRRTNELGPVSEHDYQRRKAAAQSLIGSEGSASHGFHGKCQVCNRTFASKATLQQHLKSRKH---AYATERSTQTTSKSEIVSEGGVVMAALGG------SERKDRSGTTEEDDTVGPADLDPEVCIFCNRRYFTVESAILHMWKQHGFHLPDGEFLVDLHGLLRYCAEKVKIGCMCLYCNGKGKSFLSPRDAQHHMEAKSHCKLLYEEGEDLHEFRPFYDFSASYQVLDSRRRYQEEEKMTNKTGPKSSGIDLGAVDDDDMSLETVDSAYEELSDGG--GMTTMDDGGNVGKGGEMEQIFDHAAMRVSHLGELVLPDGRSLGCRENNRYYKQYYRPEDTRVALIASKQEKAGRMASGSHDSAMVRTGNNTNVAYRSGVSREGMLENDRAARRAVMKVTAAVRRTCEKYRLRREISTNKFHKRPQIDG 449          
BLAST of NO08G02490 vs. NCBI_GenBank
Match: XP_008864373.1 (hypothetical protein H310_02589 [Aphanomyces invadans] >ETW06298.1 hypothetical protein H310_02589 [Aphanomyces invadans])

HSP 1 Score: 224.9 bits (572), Expect = 4.900e-55
Identity = 137/371 (36.93%), Postives = 193/371 (52.02%), Query Frame = 0
Query:    3 LLKCQTCGLGFDSSVAHKEHYRMELHRYNLKRRTNDLGPVSETEYQRRKAAAQSLAGMSKSTTEAF--HAKCHLCNRSFASKATLSQHLKSRKHLTMAEGDNGGTPTKVKATVAPSTPTTIKVPGSMDEAAMDEASNKAGEEEGGAAAPVDLSPEVCIFCNERCPSVESTVLHMWKQHGFHLPDGEYLVDVHGLLRYCAEKVKVGCLCLYCNGKGKGFLTARDVQRHMHSKSHCKLLYEEGEDLHEFRLFYDFSASHALPPCSKKMTRGKFKAQEDGMDDDEQSLETVDSDYEEVSGDGDXXXXXXXXXXXXXXXXXXXXXLRQMALQVSELGELMLPDGRCLGRREYQRYYKQRYRPEDVRSSLVASKHE 372
            +L C  C   F +    KEH++++ HRYNLKR+   L PV+  ++  RKA   S    +    +      KCH CN+SF S   +  H  ++KHL   + ++      + + V      T   P     AA  +AS +  E+E      V+L+   C+FC     S+E+ + HM K HGF +PD EYL D+ G + Y  EKVK+G +CLYCNGKGK F T +D Q+HM   SHCKL YEE +DLHE+  FYDF+AS+ L      +  GK  A  D    + + +E V SD E+                                + +S+ G L+LPDGR LG+REY+RYYKQR+RP+D R S++A   E
Sbjct:    1 MLTCTACREEFATYELQKEHFKLDWHRYNLKRKVVGLPPVTVEQFVARKADGTSALTTAPKVGDPVLQSFKCHNCNKSFTSVKAVENHKATKKHLAAVKKND--NVENITSKVIEQHVETADPP-----AADGDASTEDNEDE--QDPDVNLNILHCMFCTNEADSLEANLTHMQKTHGFFIPDLEYLQDLDGFITYLVEKVKLGHICLYCNGKGKAFRTYKDCQKHMIDLSHCKLRYEEDDDLHEYEEFYDFTASYGL------VASGKMAATPDDGSTEWEDVEEVGSDEED------------------------DELADVQTISISDTGNLVLPDGRQLGQREYRRYYKQRHRPDDARESVLAQTKE 332          
BLAST of NO08G02490 vs. NCBI_GenBank
Match: XP_009844345.1 (hypothetical protein H257_17308 [Aphanomyces astaci] >ETV66156.1 hypothetical protein H257_17308 [Aphanomyces astaci])

HSP 1 Score: 214.5 bits (545), Expect = 6.600e-52
Identity = 143/371 (38.54%), Postives = 199/371 (53.64%), Query Frame = 0
Query:    3 LLKCQTCGLGFDSSVAHKEHYRMELHRYNLKRRTNDLGPVSETEYQRRKAAAQSLAGMSKSTTEAFHAKCHLCNRSFASKATLSQHLKSRKH-LTMAEGDNGGTPT-KVKATVAPSTPTTIKVPGSMDEAAMDEASNKAGEEEGGAAAPVDLSPEVCIFCNERCPSVESTVLHMWKQHGFHLPDGEYLVDVHGLLRYCAEKVKVGCLCLYCNGKGKGFLTARDVQRHMHSKSHCKLLYEEGEDLHEFRLFYDFSASHALPPCSKKMTRGKFKAQEDGMDDDEQSLETVDSDYEEVSGDGDXXXXXXXXXXXXXXXXXXXXXLRQMALQVSELGELMLPDGRCLGRREYQRYYKQRYRPEDVRSSLVASKHE 372
            +L C  C   F +    KEH++++ HRYNLKR+   L PVS  ++  RKA   +   + +   +AF  KCH CN+SF++   +  H  ++KH + + + DN  T T KV A      P        +DE A     +  GE+       VDL+ + C+FC+    S+E+ + HM K HGF +PD EYL D+ G + Y  EKVK+G +CLYCNGKGK F T +D Q+HM   SHCKL YEEG DLHEF  FYDF+AS+                  DG+   +Q+  T   D         XXXXXXX                   + +S+ G ++LPDGR +G+RE +RYYKQR+RPE+ R S++A   E
Sbjct:    1 MLTCTACREEFATYELQKEHFKLDWHRYNLKRKVVGLPPVSVEQFFARKADG-APQKVEEPVLQAF--KCHNCNKSFSNVKAVDNHKATKKHQVAVKKADNVETITSKVIAKAVEDAP--------VDEEAATTEDDDEGED-------VDLNIQHCMFCSFEADSLETNLTHMQKSHGFFIPDLEYLEDLEGFVTYLVEKVKLGHVCLYCNGKGKAFRTFQDCQKHMIDLSHCKLAYEEGVDLHEFDDFYDFTASY------------------DGVVAAKQTSATAHGDXXXXXXXXXXXXXXXXLAGLE-------------TISISDTGNMVLPDGRQIGQRELRRYYKQRHRPEEARDSVLAQTKE 322          
BLAST of NO08G02490 vs. NCBI_GenBank
Match: OWZ09571.1 (hypothetical protein PHMEG_00017703 [Phytophthora megakarya])

HSP 1 Score: 209.5 bits (532), Expect = 2.100e-50
Identity = 165/466 (35.41%), Postives = 230/466 (49.36%), Query Frame = 0
Query:    3 LLKCQTCGLGFDSSVAHKEHYRMELHRYNLKRRTNDLGPVSET--EYQRRKAAAQSLAGMSKSTTEAFHA--------------KCHLCNRSFASKATLSQHLKSRKHLTMAEGDNGGTPTKVKATVAPSTPTTIKVPGSMDEAAMDEASNKAGEEEGGAAAP-----VDLSPEVCIFCNERCPSVESTVLHMWKQHGFHLPDGEYLVDVHGLLRYCAEKVKVGCLCLYCNGKGKGFLTARDVQRHMHSKSHCKLLYEEGEDLHEFRLFYDFSASHALPPCSKKMTRGKFKAQEDGMDDDEQSLETVDSDYEEVSGDGDXXXXXXXXXXXXXXXXXXXXXLRQMALQVSELGELMLPDGRCLGRREYQRYYKQRYRPEDVRSSLVASKHESAGRLWPGMESNAVVKAGGTGSLMVRGGAGGEGLWGPDKAARKAVMKVTAAARR--VHDKYRLRKEISTNKFHKRP 446
            +L C  C L F S    K+H+R + HRYNLKR+  +L PVSE   E++ RK   +  A  +    +   A              KC  CN++F +      HL S+KHL  A+          +A    +    ++V  SMDEA+ D    +  EEE           V L  E CIFC+      +S + HM K+HGF +PD E+LVD  GL+ Y AEKVKVG  CLYCNGKGK F T +DVQ+HM S SHCKL YE+ ED+ E   FYDFSA +     SKK      K+ E+ ++ +  S  ++DS          XXXX                      + VSE GEL+L  GR LGRRE++RYYKQ +RP++ R+S++A+  E+   L    ++  V   GG+ +L     A     +   +      M +  A R+   H+K R R +  ++K  K P
Sbjct:    1 MLTCTACRLEFASPAEQKDHFRKDWHRYNLKRKVVELPPVSEEQFEFRMRKVREEKEAQAANDPKQKQRARKEQIKKAGVKTVLKCVACNKTFTTSNAHENHLASKKHLANAK-------KNPEAATVETMEKQMEVV-SMDEASEDSEPKEMTEEELAQEIEEYKKHVPLEKEDCIFCSHHADDFDSCLTHMLKEHGFFIPDVEFLVDAEGLIGYLAEKVKVGFYCLYCNGKGKTFRTHQDVQKHMTSLSHCKLRYED-EDVEELLEFYDFSAQYG----SKKS-----KSVEEDVEWETDSEASIDSXXXXXXXXXXXXXXGN-------------------TIGVSETGELVLASGRRLGRREFRRYYKQHFRPDETRASVLAATKEN---LLLAYQTAGVDPRGGSTALSTAFVAN----FLKKRNNIAGGMSIVEAKRKNYWHEKNRSRLDTRSHKLQKNP 422          
BLAST of NO08G02490 vs. NCBI_GenBank
Match: XP_002907194.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY63758.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 203.4 bits (516), Expect = 1.500e-48
Identity = 174/473 (36.79%), Postives = 236/473 (49.89%), Query Frame = 0
Query:    3 LLKCQTCGLGFDSSVAHKEHYRMELHRYNLKRRTNDLGPVSET--EYQRRKAAAQSLAGMSKSTTEAFH--------------AKCHLCNRSFASKATLSQHLKSRKHLTMAEGDNGGTPT------KVKATVAPSTPTTIKVPGSMDEAAMDEASNKAGEEEGGAAAPVDLSPEVCIFCNERCPSVESTVLHMWKQHGFHLPDGEYLVDVHGLLRYCAEKVKVGCLCLYCNGKGKGFLTARDVQRHMHSKSHCKLLYEEGEDLHEFRLFYDFSASHALPPCSKKMTRGKFKAQEDGMDDDEQSLETVDSDYEEVSGDGDXXXXXXXXXXXXXXXXXXXXXLRQMALQVSELGELMLPDGRCLGRREYQRYYKQRYRPEDVRSSLVASKHES------AGRLWPGMESNAVVKAGGTGSLMVRGGAGGEGLWGPDKAARKAVMKVTAAARR--VHDKYRLRKEISTNKFHKRP 446
            +  C  C L F S    K+H+RM+ HRYNLKR+  +L PVSE   E++ RK   +  A  +    +  H               KC  CN++F +      HL S+KHL  A+ + G   T      +++       P     P    E   +E   +  E +      V L  E CIFC+      ++ + HM K+HGF +PD E+LVD+ GL+ Y AEKVKVG  CLYCNGKGK F + +DVQ+HM S SHCKL YE+ EDL E   FYDFS          +  + +  A+ED                  V  +  XXXXXXXXXXXXXXXXXXXXX  +  + VSE GEL+L  GR LGRRE++RYYKQR+RP++ R+S++A+  E+         + P   S A+  A     L  R    G              M +  A R+   H+K R R +  ++K  K P
Sbjct:    1 MFTCTACRLEFASPAEQKDHFRMDWHRYNLKRKVVELPPVSEEQFEFRMRKVREEKEAQAANDPKQKQHDRKEQIKKAGVKTLLKCVPCNKTFTTTNAHENHLASKKHLANAKKNPGVASTVETVEKQMEVVSLDDGPDEDSQPSDPKEMTEEELVKEIEEYK----KQVPLEKEDCIFCSHHAADFDACLAHMLKEHGFFIPDVEFLVDLEGLISYLAEKVKVGFYCLYCNGKGKSFRSHQDVQKHMTSLSHCKLRYED-EDLDESVEFYDFST---------QFKKNRTVAEED------------------VQWEXXXXXXXXXXXXXXXXXXXXXXXXHENTIGVSETGELVLASGRRLGRREFRRYYKQRFRPDETRASVLAAHKENLLLAYQTAGVDPRAGSTALSTAFVANFLKKRNNIAGG-------------MSIVEAKRKNFWHEKNRSRLDNRSHKLQKNP 428          
BLAST of NO08G02490 vs. NCBI_GenBank
Match: ETL81695.1 (hypothetical protein L917_18045 [Phytophthora parasitica])

HSP 1 Score: 198.7 bits (504), Expect = 3.700e-47
Identity = 174/466 (37.34%), Postives = 236/466 (50.64%), Query Frame = 0
Query:    3 LLKCQTCGLGFDSSVAHKEHYRMELHRYNLKRRTNDLGPVSETEYQRR----KAAAQSLAGMSKSTTEAFH------------AKCHLCNRSFASKATLSQHLKSRKHLTMAEGDNGGTPTKVKATVAPSTPTTIKVPGSMDEAAMDEASNKAGEEEGGA-----AAPVDLSPEVCIFCNERCPSVESTVLHMWKQHGFHLPDGEYLVDVHGLLRYCAEKVKVGCLCLYCNGKGKGFLTARDVQRHMHSKSHCKLLYEEGEDLHEFRLFYDFSASHALPPCSKKMTRGKFKAQEDGMDDDEQSLETVDSDYEEVSGDGDXXXXXXXXXXXXXXXXXXXXXLRQMALQVSELGELMLPDGRCLGRREYQRYYKQRYRPEDVRSSLVASKHESAGRLWPGMESNAVVKAGGTGSLMVRGGAGGEGLWGPDKAARKAVMKVTAAARR--VHDKYRLRKEISTNKFHKRP 446
            +L C  C L F S    K+H+RM+ HRYNLKR+  +L PVSE +++ R    +   ++ A       +  H             KC LCN++F +      HL S+KHL  A+  N    + V+          + +    DE A      +  EEE           V L  E CIFC+      +S + HM K+HGF +PD E+LVD+ GL+ Y AEKVKVG  CLYCNGKGK F + +DVQ+HM S SHCKL YE+ EDL E   FYDFS               +FK             +TV  +         XXXXXXXXXXXXXXXXXXXXX     + VSE GEL+L  GR LGRRE++RYYKQ++RP++ R+S++A+  E    L    ++  V   GG+ +L     A     +   +      M +  A R+   H+K R R +  ++K  K P
Sbjct:    1 MLTCTACRLEFASPAEQKDHFRMDWHRYNLKRKVVELPPVSEEQFELRMRKVREEKEAQAANDPKQKQRAHKEQIKKAGVKTLLKCVLCNKTFTTTNAHENHLASKKHLANAK-KNPEIASAVEK--VEKQMEVVSLEDGADEDAQPSEPKEMTEEELAKEIEEYKKQVPLEKEDCIFCSHHAADFDSCLTHMLKEHGFFIPDVEFLVDLEGLIGYLAEKVKVGFYCLYCNGKGKSFRSHQDVQKHMTSLSHCKLRYED-EDLDELVEFYDFST--------------QFKKN-----------KTVAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGVSETGELVLASGRRLGRREFRRYYKQKFRPDETRASVLAAHKE---HLLLAYQTAGVDPRGGSTALSTAFVAN----FLKKRNNIAGGMSIVEAKRKNFWHEKNRSRLDNRSHKLQKNP 430          
BLAST of NO08G02490 vs. NCBI_GenBank
Match: XP_008896708.1 (hypothetical protein PPTG_05012 [Phytophthora parasitica INRA-310] >ETI34676.1 hypothetical protein F443_18859 [Phytophthora parasitica P1569] >ETK75023.1 hypothetical protein L915_18321 [Phytophthora parasitica] >ETL28446.1 hypothetical protein L916_18228 [Phytophthora parasitica] >ETM34900.1 hypothetical protein L914_18131 [Phytophthora parasitica] >ETN17118.1 hypothetical protein PPTG_05012 [Phytophthora parasitica INRA-310] >ETO63474.1 hypothetical protein F444_18848 [Phytophthora parasitica P1976] >ETP04576.1 hypothetical protein F441_18702 [Phytophthora parasitica CJ01A1] >ETP32701.1 hypothetical protein F442_18675 [Phytophthora parasitica P10297] >KUF88604.1 Cytoplasmic 60S subunit biogenesis factor [Phytophthora nicotianae] >KUF99521.1 hypothetical protein AM588_10009961 [Phytophthora nicotianae])

HSP 1 Score: 196.1 bits (497), Expect = 2.400e-46
Identity = 174/466 (37.34%), Postives = 235/466 (50.43%), Query Frame = 0
Query:    3 LLKCQTCGLGFDSSVAHKEHYRMELHRYNLKRRTNDLGPVSETEYQ--RRKAAAQSLAGMSKSTTEAFHA--------------KCHLCNRSFASKATLSQHLKSRKHLTMAEGDNGGTPTKVKATVAPSTPTTIKVPGSMDEAAMDEASNKAGEEEGGA-----AAPVDLSPEVCIFCNERCPSVESTVLHMWKQHGFHLPDGEYLVDVHGLLRYCAEKVKVGCLCLYCNGKGKGFLTARDVQRHMHSKSHCKLLYEEGEDLHEFRLFYDFSASHALPPCSKKMTRGKFKAQEDGMDDDEQSLETVDSDYEEVSGDGDXXXXXXXXXXXXXXXXXXXXXLRQMALQVSELGELMLPDGRCLGRREYQRYYKQRYRPEDVRSSLVASKHESAGRLWPGMESNAVVKAGGTGSLMVRGGAGGEGLWGPDKAARKAVMKVTAAARR--VHDKYRLRKEISTNKFHKRP 446
            +L C  C L F S    K+H+RM+ HRYNLKR+  +L PVSE +++   RK   +  A  +    +   A              KC  CN++F +      HL S+KHL  A+  N    + V+          + +    DE A      +  EEE           V L  E CIFC+      +S + HM K+HGF +PD E+LVD+ GL+ Y AEKVKVG  CLYCNGKGK F + +DVQ+HM S SHCKL YE+ EDL E   FYDFS               +FK             +TV  +         XXXXXXXXXXXXXXXXXXXXX     + VSE GEL+L  GR LGRRE++RYYKQ++RP++ R+S++A+  E    L    ++  V   GG+ +L     A     +   +      M +  A R+   H+K R R +  ++K  K P
Sbjct:    1 MLTCTACRLEFASPAEQKDHFRMDWHRYNLKRKVVELPPVSEEQFELRMRKVREEKEAQAANDPKQKQRARKEQIKKAGVKTLLKCVPCNKTFTTTNAHENHLASKKHLANAK-KNPEIASAVEK--VEKQMEVVSLEDGADEDAQPSEPKEMTEEELAKEIEEYKKQVPLEKEDCIFCSHHAADFDSCLTHMLKEHGFFIPDVEFLVDLEGLIGYLAEKVKVGFYCLYCNGKGKSFRSHQDVQKHMTSLSHCKLRYED-EDLDELVEFYDFST--------------QFKKN-----------KTVAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIGVSETGELVLASGRRLGRREFRRYYKQKFRPDETRASVLAAHKE---HLLLAYQTAGVDPRGGSTALSTAFVAN----FLKKRNNIAGGMSIVEAKRKNFWHEKNRSRLDNRSHKLQKNP 430          
BLAST of NO08G02490 vs. NCBI_GenBank
Match: XP_024586005.1 (cytoplasmic protein [Plasmopara halstedii] >CEG49636.1 cytoplasmic protein [Plasmopara halstedii])

HSP 1 Score: 193.7 bits (491), Expect = 1.200e-45
Identity = 154/385 (40.00%), Postives = 204/385 (52.99%), Query Frame = 0
Query:    6 CQTCGLGFDSSVAHKEHYRMELHRYNLKRRTNDLGPVSETEYQRR-------KAAAQSLAGMSKSTTEAFH---------AKCHLCNRSFASKATLSQHLKSRKHLTMAE--GDNGGTPTKVKATVAPSTPTTIKVPGSMDEAAMDEASNKAGEEEGGAAAPVDLSPEVCIFCNERCPSVESTVLHMWKQHGFHLPDGEYLVDVHGLLRYCAEKVKVGCLCLYCNGKGKGFLTARDVQRHMHSKSHCKLLYEEGEDLHEFRLFYDFSASHALPPCSKKMTRGKFKAQEDGMDDDEQSLETVDSDYEEVSGDGDXXXXXXXXXXXXXXXXXXXXXLRQMALQVSELGELMLPDGRCLGRREYQRYYKQRYRPEDVRSSLVASKHES 373
            C  C L F S +  K+H+RM+ HRYNLKR+  +L P+SE +++ R       K A  +     K  T              KC  CN+ F ++     HL S+KH+  A+   D+      V   V       I    +      +  + +  EE       V L  E CIFC+     + S++ HM K+HGF +PD +YLVD+ GL+ Y AEKVKVG  CLYCNGKGK F + +DVQ+HM S SHCKL YEE EDL+E   FYDFS                       M  +   + + D    E      XXXXXXXXXXXXXXXXXXXXX       VSE GEL+L  GR LGRRE++RYY+QR+RP++ R+S++A+  E+
Sbjct:    4 CTACRLEFTSFLEQKDHFRMDWHRYNLKRKVVELPPISEEQFELRMRKVREEKEAQAARDPKQKQRTRKDELKKAGVKSMLKCVPCNKLFTTRNAHENHLSSKKHIDNAKKIPDSADMVAIVDKPVQGVMLDAISAQDTDFGNPTELTAEELAEEIEEYKKHVPLEKEDCIFCSHHATDLNSSLTHMLKEHGFFIPDLDYLVDLEGLISYVAEKVKVGFYCLYCNGKGKSFRSYQDVQKHMTSLSHCKLRYEE-EDLNELLEFYDFS-----------------------MQYNTNKIASTD----EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSETGELVLASGRRLGRREFRRYYRQRFRPDETRASVLAAHKEN 360          
BLAST of NO08G02490 vs. NCBI_GenBank
Match: XP_004350512.1 (C2H2-type zinc finger-containing protein [Cavenderia fasciculata] >EGG13804.1 C2H2-type zinc finger-containing protein [Cavenderia fasciculata])

HSP 1 Score: 187.6 bits (475), Expect = 8.600e-44
Identity = 121/368 (32.88%), Postives = 182/368 (49.46%), Query Frame = 0
Query:    6 CQTCGLGFDSSVAHKEHYRMELHRYNLKRRTNDLGPVSETEYQRRKAAAQSLAGMSKSTTEAFHAKCHLCNRSFASKATLSQHLKSRKHLTMAEGDNGGTPTKVKATVAPSTPTTIKVPGSMDEAAMDEASNKAGEE-EGGAAAPVDLSP----EVCIFCNERCPSVESTVLHMWKQHGFHLPDGEYLVDVHGLLRYCAEKVKVGCLCLYCNGKGKGFLTARDVQRHMHSKSHCKLLYEEGEDLHEFRLFYDFSASHALPPCSKKMTRGKFKAQEDGMDDDEQSLETVDSDYEEVSGDGDXXXXXXXXXXXXXXXXXXXXXLRQMALQVSELGELMLPDGRCLGRREYQRYYKQRYRPEDVRSSLVAS 369
            C +C + FD+    + HY+ ELHR+NLKR+  DL PV+   +  +  AA+       +T E    +C  CN+SF+S+    QH+ S+KH  +    +G T  KV+          +K P  M +   ++ +N+  EE E   A  +  +P    E C+FC + C S+++ V HM K H F +PD EYLVD+ GL+R+C++K+ VG +CLYCNG+G+   T   VQ+HM   SHCK+ YE  ED  E+  +YDFS S+A P              ++ ++ D    + + SD+                                         EL+LPDG  +G R+Y +YYKQRY   D R   + S
Sbjct:   15 CISCRVLFDTVEDQRVHYKSELHRFNLKRKVLDLPPVTYETFLAKVEAAKK-EEEKAATAEPTKFECRFCNKSFSSEGPYKQHIDSKKHKDIVA--SGATEKKVR----------VKKP--MTDEEKEKIANETQEEYEAKIAEKIKNTPKLPIEHCLFCTKVCKSLDNNVKHMAKVHSFFIPDIEYLVDLEGLIRFCSDKINVGNICLYCNGRGRKIHTLEAVQQHMVDLSHCKMNYETEEDSEEYLEYYDFSKSYADP-----------SNPDEEINQDNIKNKIIVSDH-----------------------------------------ELVLPDGTTIGHRDYAKYYKQRYTTPDKRQEAIHS 315          
The following BLAST results are available for this feature:
BLAST of NO08G02490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856157.16.200e-13556.96c2h2-type zinc finger-containing protein, partial ... [more]
EWM26755.18.100e-13556.96c2h2-type zinc finger-containing protein [Nannochl... [more]
XP_008864373.14.900e-5536.93hypothetical protein H310_02589 [Aphanomyces invad... [more]
XP_009844345.16.600e-5238.54hypothetical protein H257_17308 [Aphanomyces astac... [more]
OWZ09571.12.100e-5035.41hypothetical protein PHMEG_00017703 [Phytophthora ... [more]
XP_002907194.11.500e-4836.79conserved hypothetical protein [Phytophthora infes... [more]
ETL81695.13.700e-4737.34hypothetical protein L917_18045 [Phytophthora para... [more]
XP_008896708.12.400e-4637.34hypothetical protein PPTG_05012 [Phytophthora para... [more]
XP_024586005.11.200e-4540.00cytoplasmic protein [Plasmopara halstedii] >CEG496... [more]
XP_004350512.18.600e-4432.88C2H2-type zinc finger-containing protein [Cavender... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008785NSK008785Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02490.1NO08G02490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|625109gene_3579Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g157gene3814Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02490.1NO08G02490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02490 ID=NO08G02490|Name=NO08G02490|organism=Nannochloropsis oceanica|type=gene|length=1831bp
AAATAATTGAAATGCGTGAGTGTGAGGCATCCTGTGCTCAAACGAGGAAC
TTTGAGACTTGTGGCAGAGCCAAGAGGGTAGCCCCAACTCGCACCAGGAA
AATCAAAATCTGACCTGCACCCTGACCACCAAAGACCCCTGGATGTAGTC
TGATGTCCTTGCCAAGGCACCAACTGGAAGGGCTAAGTGAGACAGCTCTC
GTTTTGTCAATCTATCCACGCATCACCACTCAATCAAAACACATCCCGTC
CGCGTACGCACCGCAGCACCTTGCCCGCCGGCTTCCCCACACCGCGCAAC
GCACGGGGTCTTTTTCACCCAACGCACGCGCACTCGGGTAACATGGACCT
CCTCAAATGTCAGACATGTGGCCTGGGATTCGATTCATCCGTCGCTCACA
AAGAGCACTATCGCATGGAGCTCCACCGATACAATCTGAAGCGCCGCACC
AACGACCTGGGGCCTGTCAGTGAAACTGAATATCAACGCCGCAAAGCCGC
CGCCCAGAGCTTGGCTGGGATGAGCAAATCGACTACCGAGGCCTTTCACG
CTAAATGCCATCTCTGCAACCGCTCCTTTGCCTCTAAGGCCACGCTGAGC
CAGCATCTCAAGTCCCGCAAGCACCTCACCATGGCGGAGGGCGACAACGG
TGGTACCCCCACCAAGGTAAAAGCTACTGTAGCGCCCTCCACCCCAACGA
CGATCAAGGTACCCGGCTCTATGGATGAGGCGGCCATGGACGAGGCCAGC
AATAAGGCAGGGGAGGAGGAAGGCGGGGCTGCTGCACCGGTAGACCTGAG
CCCTGAGGTTTGCATCTTTTGCAACGAGCGATGCCCGAGCGTGGAGTCAA
CTGTGTTGCACATGTGGAAGCAGCATGGTTTTCACTTACCTGATGGGGAG
TATCTGGTGGACGTGCATGGTTTGCTGCGATACTGCGCGGAGAAGGTGAA
GGTTGGCTGTTTGTGTCTGTATTGTAATGGTAAGGGTAAGGGGTTTCTGA
CGGCTCGGGACGTGCAGCGACACATGCATTCCAAGAGCCACTGCAAGCTC
TTGTATGAGGAGGGAGAAGATCTTCATGAATTTCGTCTTTTTTATGATTT
TAGTGCCTCGCATGCCCTCCCTCCGTGTAGCAAGAAGATGACAAGGGGCA
AGTTTAAGGCGCAGGAGGATGGGATGGATGACGACGAGCAATCACTAGAG
ACGGTGGATTCGGACTATGAAGAGGTGAGCGGTGATGGCGACGAGGGCAT
GGAAGCTGATAAGGGAGAGGACGAGGACGACGAGGACGAGGATGTGGAGC
AAATGCTGCGCCAGATGGCTTTGCAAGTCTCGGAGTTGGGGGAGTTGATG
CTACCGGATGGACGGTGCTTGGGCCGCCGTGAGTATCAACGGTATTACAA
GCAGCGGTATCGTCCCGAGGACGTCCGATCGTCGTTGGTGGCGTCGAAGC
ATGAGTCAGCTGGGCGGTTGTGGCCAGGAATGGAGAGCAATGCGGTTGTG
AAGGCGGGAGGGACAGGGAGCTTGATGGTGCGTGGTGGGGCGGGGGGGGA
GGGGTTATGGGGGCCTGATAAGGCGGCGCGGAAGGCGGTGATGAAGGTAA
CGGCGGCGGCACGACGGGTTCATGATAAATACAGGTTACGGAAGGAGATC
AGCACAAATAAGTTCCACAAGCGGCCTCAGATTGACGGCTAGAGTGTGAG
TGTTTGTATTTGTGTTTGTGTACTGAGACGGACGCCTTAGGAGGAAGGTG
GACGAGAACAAAGATATTAGATAAATACAAGCGAAGAGGAGTGCCAAAAA
AGCAAGCAAGAGAGTGTCCTCCATTTTCCGG
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protein sequence of NO08G02490.1

>NO08G02490.1-protein ID=NO08G02490.1-protein|Name=NO08G02490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=450bp
MDLLKCQTCGLGFDSSVAHKEHYRMELHRYNLKRRTNDLGPVSETEYQRR
KAAAQSLAGMSKSTTEAFHAKCHLCNRSFASKATLSQHLKSRKHLTMAEG
DNGGTPTKVKATVAPSTPTTIKVPGSMDEAAMDEASNKAGEEEGGAAAPV
DLSPEVCIFCNERCPSVESTVLHMWKQHGFHLPDGEYLVDVHGLLRYCAE
KVKVGCLCLYCNGKGKGFLTARDVQRHMHSKSHCKLLYEEGEDLHEFRLF
YDFSASHALPPCSKKMTRGKFKAQEDGMDDDEQSLETVDSDYEEVSGDGD
EGMEADKGEDEDDEDEDVEQMLRQMALQVSELGELMLPDGRCLGRREYQR
YYKQRYRPEDVRSSLVASKHESAGRLWPGMESNAVVKAGGTGSLMVRGGA
GGEGLWGPDKAARKAVMKVTAAARRVHDKYRLRKEISTNKFHKRPQIDG*
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Synonyms
Publications