NO08G01520, NO08G01520 (gene) Nannochloropsis oceanica

Overview
NameNO08G01520
Unique NameNO08G01520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1990
Alignment locationchr8:476818..478807 -

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Properties
Property NameValue
DescriptionU3 small nucleolar rna-interacting protein 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:476818..478807 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0034511U3 snoRNA binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Homology
BLAST of NO08G01520 vs. NCBI_GenBank
Match: EWM26654.1 (u3 small nucleolar rna-interacting protein 2 [Nannochloropsis gaditana])

HSP 1 Score: 637.5 bits (1643), Expect = 4.200e-179
Identity = 340/516 (65.89%), Postives = 391/516 (75.78%), Query Frame = 0
Query:    1 MSRRKIFGGTGVRGRGRGGSLGSGERSTTRVGGGPGGAWRASFNLD---QRSSHNNDDEYIDDVVSGSEDELPRKKGRAAETDT---AEMEDRETAAEKRVRLAKQYLAQMEAAMGSEDDGXXXXXXXXXVDGKDALGLLLEKERLKASGSLRRALAGSLSNLAADSIPTQVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLSPHWRGGQGYQAHEKEVLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHGGAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVNGLHILRLPFE 511
            MS+RK+ GG+G +GR RGGS+ S      +  GGP  A +   NLD   +     NDDEYI++  S S +++PRK+GRA +  T    E ED ETAAE RVRLAKQYLAQMEAA+GSE+D            GKD++G LLE+ERLKASGSLRRALAG LSN +A ++PT ++KGHKL+PTCVTI+ DER AFTG KDNAIL+YDLE+G RTATLS  WRGGQGYQ+HEKEVLA+AVSSDGR+LAAGGRDKEIRIWDLR RG  +GL LKPVKTF                                      VETLFGHQAEING+DAWRRERPVTCGRDRSVRVWKL DESHMLL+CPQGVG GGA +GLVMGGSLDC++MLSEE +VTGGEDGMLA+WNVNKKKPVA+V  AHGG   WISSVA IKGTDLVASGS+DG VRLW+A+TT QGQGSSL  TG  L  PG+VNGLA GHSG++LVAACGKEHRLGRWAP+KGAVNGL+++RLP E
Sbjct:    1 MSKRKVGGGSGTKGRLRGGSVRS------KPSGGP-VAQQERANLDFSLESKRQPNDDEYIEEEGSESGEDVPRKRGRATQQGTDGAMEEEDDETAAEMRVRLAKQYLAQMEAALGSENDEEESHDEDTD-RGKDSMGALLERERLKASGSLRRALAGRLSNFSAATVPTHILKGHKLAPTCVTITADERTAFTGGKDNAILRYDLESGRRTATLSSFWRGGQGYQSHEKEVLALAVSSDGRYLAAGGRDKEIRIWDLRGRGHREGLVLKPVKTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVETLFGHQAEINGIDAWRRERPVTCGRDRSVRVWKLADESHMLLQCPQGVGGGGASKGLVMGGSLDCLSMLSEECFVTGGEDGMLAMWNVNKKKPVAVVPAAHGGNSRWISSVAAIKGTDLVASGSNDGYVRLWRASTTPQGQGSSLESTGAALLCPGYVNGLAFGHSGSVLVAACGKEHRLGRWAPEKGAVNGLYVMRLPDE 508          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: GAX98365.1 (U3 small nucleolar RNA-interacting protein, putative [Pythium insidiosum])

HSP 1 Score: 331.3 bits (848), Expect = 6.400e-87
Identity = 190/398 (47.74%), Postives = 253/398 (63.57%), Query Frame = 0
Query:   92 EKRVRLAKQYLAQMEAAMGSEDDGXXXXXXXXXVDGKDALGLLLEKERLKASGSLRRALAGSLSNLAADSIPTQVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLSPHWRGGQGYQAHEKEVLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHGGAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRL 490
            +KR+RLAK+YL ++ A     DD          VD  + +G  L+++ L+A G L + +A   ++   +S  T+ ++GHKLSPT V +S D + AF+ SKD AIL++DL T  +T    P          HE+ VLA+A+SSDG+FLA+GGRDK +R+WD          + + ++TF GHRDAVSAL FR  SH L+SGS DRC+KHWN+  M YVETLFGHQ+E+  +D+  RER V+CGRDRSVR+WK+ +E+H++L        GG        GS+DCV M++EE YVTGG+DG L LW   +KKPV +V +AH GAG WISSVA +  TDLVASGS DGV+RLW+A       G +L      +P  G VNGL     G  LVAA G+EHRL
Sbjct:   95 DKRIRLAKEYLTKITAQEADGDD------DTSGVD--ERVGARLQQDALEAMGKLFKEVA---AHFGPES--TRFLRGHKLSPTSVCLSEDGKTAFSASKDGAILRWDLATQQKTRLELPKDDVSTAKTDHERCVLALALSSDGKFLASGGRDKLLRVWD------ASSATPRLLETFQGHRDAVSALTFRQRSHMLFSGSLDRCIKHWNLTEMGYVETLFGHQSEVLALDSLYRERVVSCGRDRSVRMWKIPEETHLVL-------YGGT-------GSIDCVRMINEEYYVTGGDDGALTLWFNGRKKPVHVVRDAH-GAGRWISSVAVMPRTDLVASGSSDGVIRLWRADLA----GRALVPVAE-IPQAGVVNGLCFDPKGRFLVAAVGQEHRL 453          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: OWZ00983.1 (U3 small nucleolar RNA-interacting protein [Phytophthora megakarya])

HSP 1 Score: 316.6 bits (810), Expect = 1.600e-82
Identity = 174/389 (44.73%), Postives = 244/389 (62.72%), Query Frame = 0
Query:  128 KDALGLLLEKERLKASGSLRRALAGSLSNLAADSIPTQVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLSPHWRGGQGYQAHEKE--VLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHGGAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVNGLHILRLPFEEGSK 515
            ++ +G  L+++ L+A G L + +A   +    D+  T+ +KGH+L  T V +  D R AF+ +KD ++L++DL    +T    P           +K+  +LA+A SSDG+FLA+GGRDK +R+WD  E+GE +       ++FAGHRDAVSAL FR  SH+L+S SFDR +KHWN+  M YVETLFGHQ+E+NG+D+  +ER V+CGRDRSVR+WK+ +E+ ++                   GS+DCV M+++E YVTGG+DG L+LW   +KKPV ++ NAH   G WISSVA +  TDLVASGS DG +RLWQA      QG +LT   + +P  GFVN L        L+A  G+EHRLGRW   K   NG+ I+ LP  +G +
Sbjct:   93 EERVGARLQQDALEAMGRLFKKVASDYTAFEFDADSTKFLKGHRLPVTSVCLLDDGRTAFSAAKDGSLLRWDLAQQKKTKLTLPKDDVAADKAKTDKDRCILALAASSDGKFLASGGRDKLVRVWD-AEKGELQ-------ESFAGHRDAVSALAFRLRSHSLFSASFDRSIKHWNLTEMGYVETLFGHQSEVNGLDSLYKERVVSCGRDRSVRMWKIPEETQLVF--------------YGNSGSMDCVKMVTDEYYVTGGDDGSLSLWFNGRKKPVCVIPNAHD--GKWISSVAVMPRTDLVASGSSDGQIRLWQADL----QGRTLTPVAS-IPLEGFVNALCFDAKARFLLAGVGQEHRLGRWEKLK-VKNGIAIIALPSIDGDQ 451          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: GAY06812.1 (U3 small nucleolar RNA-interacting protein, putative, partial [Pythium insidiosum])

HSP 1 Score: 287.0 bits (733), Expect = 1.400e-73
Identity = 156/332 (46.99%), Postives = 212/332 (63.86%), Query Frame = 0
Query:   92 EKRVRLAKQYLAQMEAAMGSEDDGXXXXXXXXXVDGKDALGLLLEKERLKASGSLRRALAGSLSNLAADSIPTQVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLSPHWRGGQGYQAHEKEVLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHGGAGHWISSVATI 424
            +KR+RLAK+YL ++ A     DD          VD  + +G  L+++ L+A G L + +A    +       T+ ++GHKLSPT V +S D + AF+ SKD AIL++DL T  +T    P          HE+ VLA+A+SSDG+FLA+GGRDK +R+WD          + + ++TF GHRDAVSAL FR  SH L+SGS DRC+KHWN+  M YVETLFGHQ+E+  +D+  RER V+CGRDRSVR+WK+ +E+H++L        GG        GS+DCV M++EE YVTGG+DG L LW   +KKPV +V +AH GAG WISSVA +
Sbjct:   95 DKRIRLAKEYLTKITAQEADGDD------DTSGVD--ERVGARLQQDALEAMGKLFKEVAAQFEDFEFGPESTRFLRGHKLSPTSVCLSEDGKTAFSASKDGAILRWDLATQQKTRLELPKDDVSTAKTDHERCVLALALSSDGKFLASGGRDKLLRVWD------ASSATPRLLETFQGHRDAVSALTFRQRSHMLFSGSLDRCIKHWNLTEMGYVETLFGHQSEVLALDSLYRERVVSCGRDRSVRMWKIPEETHLVL-------YGGT-------GSIDCVRMINEEYYVTGGDDGALTLWFNGRKKPVHVVRDAH-GAGRWISSVAVM 397          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: PRW20874.1 (U3 small nucleolar RNA-interacting 2 [Chlorella sorokiniana])

HSP 1 Score: 283.9 bits (725), Expect = 1.200e-72
Identity = 188/474 (39.66%), Postives = 260/474 (54.85%), Query Frame = 0
Query:   94 RVRLAKQYLAQMEAAMGSEDD---------GXXXXXXXXXVDGKDALGLLLEKERLKASGSLRRALAGSL--------SNLAADSIP-TQVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLSPHWRGGQG-----------------YQAHEKEVLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAH-----------------GGAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVNGLHI--LRLPFEEGS 514
            R+RLAK YL Q++A   +E +          XXXXXXXXX     A+   L ++ L++ G L+R LA  L        ++ A  S    ++++GH+LS T V ++ DER AF+  K+ +I+Q+D+ETG R    +P    G G                  Q     +LA AVSSDGR+LA GG D+++ IWD R R   +G        F GH+DAV++L FR  +H L+SGS DR +K W++D M YV+TLFGHQAE+  +DA R ER V+CG DR+ RVWK+ +ES ++             RG     +++C   L+   +VTG  DG ++LW+  KKKP   +  AH                 G A  W+ +V   +G D++ASG+ DGVVRLW+   T  G G +L   G  LP  GFVN LALG SG +LVA  G+E R+GRW     A NG+ I  L+L  EEGS
Sbjct:   61 RLRLAKAYLDQVKAIERAEREPEXXXXXXXXXXXXXXXXXXXDHGAVADRLRQDALESMGHLQRRLAHRLRLPPLPRVADYAGPSAAGGRLLRGHRLSVTAVALTTDERTAFSVGKEGSIMQWDVETGARLKFAAPAAAAGVGSGQDAEGGAADWVKRGPRQGGRNSLLAAAVSSDGRYLAVGGGDRKVHIWDARSRQYMRG--------FPGHKDAVTSLAFREGTHELFSGSLDRSIKLWSLDDMAYVDTLFGHQAEVLALDAARAERCVSCGADRTCRVWKIPEESQLIF------------RGHC--NTIECCRYLTGNEWVTGSADGSVSLWSATKKKPAFTMRGAHADPAADGEEAEGAGSVGGDAATWVGAVGVCRGADIMASGAGDGVVRLWRLAETKGGSGRALEPLGG-LPVRGFVNSLALGRSGRVLVAGVGQEPRMGRWLRDAAARNGVLIQPLQLAAEEGS 511          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: GAX25970.1 (ribosomal RNA-processing protein 9 [Fistulifera solaris])

HSP 1 Score: 282.3 bits (721), Expect = 3.400e-72
Identity = 151/403 (37.47%), Postives = 232/403 (57.57%), Query Frame = 0
Query:  135 LEKERLKASGSLRRALAGSL------------------------SNLAADSIPTQVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLSPHW----RGGQGYQAHEKEVLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHGGAGHWISSVATIKGTDLVASGSDDGVVRLWQATT--TAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVNGLHILRL 508
            L++ERLK  G+L R LA  +                        +NL   S   +++ GH LSPT V +    ++A +GSKDN+++ +D+ETG R   L  HW    + G     +  EVLA+++S DGR+   G RD ++ ++DL+            VKTF GH+  +S L F++ SH L+S S DRC++H+++D M+Y+ETL+GHQ  ++G+D  R+ERP++ GRDR+ R WKL ++SH++             RG     S DC++++ ++ ++TG EDG L LWN +KK+ V+ +++AH G G+ I SV+ +K +DL ASGS DG +RLW+  T  T + +G  L      +P  G++N +  G     LVAA G+EHR GRW   KG  N + I+ L
Sbjct:  105 LQRERLKREGTLERILADKVGKHVEALQTAMLQDQLTILPSHEAANLWIQSGNIRLLHGHDLSPTSVAVDASGKLAVSGSKDNSVIVWDVETGSRLYNLYRHWKQNKKDGNKGSRNGGEVLAVSMSDDGRYAVVGKRDSKVTVFDLK-----SNTPTVIVKTFEGHKGPISCLAFQSYSHRLFSSSEDRCIRHYSLDDMLYMETLYGHQFAVSGIDCHRKERPISVGRDRTARAWKLAEDSHLIF------------RGGSKIQSADCISLIKDDWFLTGHEDGHLCLWNTDKKRAVSTIADAH-GTGNPIVSVSALKESDLAASGSKDGFIRLWKVRTGKTLEERGMELL---VAIPVRGYINAIRFGPKARFLVAAMGQEHRCGRWDRMKGVKNRVAIVNL 486          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: GAX24411.1 (ribosomal RNA-processing protein 9 [Fistulifera solaris])

HSP 1 Score: 280.4 bits (716), Expect = 1.300e-71
Identity = 151/403 (37.47%), Postives = 232/403 (57.57%), Query Frame = 0
Query:  135 LEKERLKASGSLRRALAGSL------------------------SNLAADSIPTQVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLSPHWR----GGQGYQAHEKEVLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHGGAGHWISSVATIKGTDLVASGSDDGVVRLWQATT--TAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVNGLHILRL 508
            L++ERLK  G+L R LA  +                        +NL   S   +++ GH L+PT V +    ++A +GSKDN+++ +D+ETG     L  HW+    G      +  EVLA+++S DGR+   G RD ++ ++DL+          + VKTF GH+  +S L F++ SH L+S S DRC++H+++D M+Y+ETL+GHQ  ++G+D  R+ERPV+ GRDR+ R WKL ++SH++             RG     S DCV+++ ++ ++TG EDG L LWN +KK+ V+ +++AH G G+ + SV+ +K +DL ASGS DG +RLW+  T  T + +G  L      +P  G+VN +  G     LVAA G+EHR GRW   KG  N + I+ L
Sbjct:  105 LQRERLKREGTLERILADKVGKHVEALQTTMLQDKLTMLPSHEAANLWVQSGNIRLLHGHDLTPTSVAVDASGKVAVSGSKDNSVIVWDVETGSPLHNLYRHWKQNKEGANKGSRNGGEVLAVSLSDDGRYAVVGKRDSKVIVFDLKSNN-----PTEIVKTFEGHKGPISCLAFQSYSHRLFSSSEDRCIRHYSLDDMLYMETLYGHQFAVSGIDCHRKERPVSVGRDRTARAWKLAEDSHLIF------------RGGSKIQSADCVSLIKDDWFITGHEDGHLCLWNTDKKRAVSTIADAH-GTGNPLVSVSALKESDLAASGSKDGFIRLWKVRTGKTLEERGMELL---VAIPVRGYVNAIRFGPKARFLVAAIGQEHRCGRWDRVKGVKNRVAIVNL 486          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: XP_005848008.1 (hypothetical protein CHLNCDRAFT_22742 [Chlorella variabilis] >EFN55906.1 hypothetical protein CHLNCDRAFT_22742 [Chlorella variabilis])

HSP 1 Score: 275.8 bits (704), Expect = 3.200e-70
Identity = 177/458 (38.65%), Postives = 251/458 (54.80%), Query Frame = 0
Query:   95 VRLAKQYLAQMEAAMGSEDDGXXXXXXXXXVD-----GKDALGLLLEKERLKASGSLRRALAGSLSNLAADSIPT------------QVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLS---------------PHWRGGQGYQAHEKEVLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIV----------SNAHGGAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVNGLHILRLPFE 511
            +RLAK YL Q++A   +E + XXXXXXXXX         DA+   L  + L+  G L+R LA     LA   +P             ++++GH+LS T V ++ DER  F+ SKD AIL++D+E+G R   ++                 W      Q+    +LA AVS DGR+LA GG D+++ +WD R R        + V+ F GH+DAV+ L FR  +H LYSGS DR +K W++D M YV+TLFGHQAE+  +DA R ER V+CG DR+ RVWK+ +ES ++             RG  +  +++C   ++  ++ TG  DG L+LW+  KKKP+  +           +  G A  W+ SV   +G+DL+ASG+ DGVVRLW+      G   +L   G  +P  GFVN LALG SG +LVA  G+E R+GRW     A NG+ I  L  +
Sbjct:   64 LRLAKAYLDQVKAIEAAEREXXXXXXXXXXXXXGGSAAHDAVAGRLRDDALEGMGHLQRRLA---HRLALPPLPRVADYGGAAACGGRLLRGHRLSVTAVALTADERTVFSVSKDGAILEHDVESGARQRFVASSAAGLGRVEQTGTEADWVKRGPRQSGAASLLAAAVSGDGRYLAVGGGDRKVHVWDARSR--------QYVRGFPGHKDAVTCLAFREGTHELYSGSLDRSIKLWSLDDMAYVDTLFGHQAEVLSVDALRAERCVSCGADRTCRVWKIPEESQLIF------------RGHCL--TIECCRYIAGGAWATGAADGSLSLWSGTKKKPMFTMRRDGEEAEGAGSVGGDAATWVGSVGVCRGSDLLASGAGDGVVRLWRVADAKGGSSKALEAVGG-VPVRGFVNSLALGRSGRVLVAGVGQEPRMGRWLRDAAARNGVLIQPLQLD 495          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: EJK62130.1 (hypothetical protein THAOC_17274 [Thalassiosira oceanica])

HSP 1 Score: 273.1 bits (697), Expect = 2.100e-69
Identity = 171/457 (37.42%), Postives = 251/457 (54.92%), Query Frame = 0
Query:   95 VRLAKQYLAQMEAAMGSEDDGXXXXXXXXXVDGKDALGLLLEKERLKASGSLRRALAGSLS-----------------NLAADSIPTQVI---KGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLSPHWRGG--QGYQAHEKEVLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVA-IVSNAHG------GAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQG-SSLTF------TG--------TMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVNGLHILRL 508
            +RLAK YL ++EA   S+ DG          D  D +G  + KERLK++G L+  +A S+S                  LA   I  + +   +GH L+PTCV +SR+   AF+GSKD +++ +D+E G +  T+    R      Y  +E+E+LA+A S DGR+LA  GRDK +R++D+R  G     S  PV  F GH+ AV+AL FR+ +  LYSGS DRC++ +++  M YVETL+GHQ+ + GMD   + RPV+  RDR+VRVWK+ ++SH + +    V            GS DC++ + +  +VTG +DG LALW   KK+PV  +++ AHG      G+   +     +  +D++A+GS+DG +RLW+    A  +  S L F      TG          +P  G VN +A+G  G   VAA G+E RLGRW     A N   I+RL
Sbjct:   66 LRLAKDYLGKIEAQDSSDSDGSSAATDS---DTDDKVGKRILKERLKSTGLLQTCIAESVSRGIQEMKATIEASDSAEELAKSWIDKKYVTYHRGHDLTPTCVALSREGHHAFSGSKDGSLIMWDVEEGRKMTTILSSKRADNQSQYARNERELLALAASDDGRYLATAGRDKCVRVFDIRTLGNTDTAS--PVTIFEGHKKAVTALAFRSRTMDLYSGSEDRCIRRYDLGAMTYVETLYGHQSAVVGMDCANKNRPVSIARDRTVRVWKVEEDSHFVFRPGGDV------------GSADCISAIQDGWFVTGHDDGRLALWREEKKRPVGDVITAAHGYEGTSDGSKRSVVCCDGVAMSDVLATGSNDGHLRLWKVRKLASARSFSPLIFIALQVSTGECAGINPLESIPMHGHVNDVAVGPEGRFCVAAVGQEPRLGRWDRVARAKNRFAIIRL 505          
BLAST of NO08G01520 vs. NCBI_GenBank
Match: ORX93890.1 (WD40 repeat-like protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 266.2 bits (679), Expect = 2.500e-67
Identity = 165/449 (36.75%), Postives = 252/449 (56.12%), Query Frame = 0
Query:   82 AEMEDRETAAEKRVRLAKQYLAQMEAAM-GSEDDGXXXXXXXXXVDGKDALGLLLEKERLKASGSLRRALAGSLSNLAADSIPTQVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDLETGVRTATLSPHWRGGQGYQAHEKEVLAIAVSSDGRFLAAGGRDKEIRIWDLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHWNMDGMVYVETLFGHQAEINGMDAWRRERPVTC-GRDRSVRVWKLVDESHMLLKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKKKPVAIVSNAHG-----GAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQGSSLTFTGTMLPAPGFVNGLALGHSGTL------LVAACGKEHRLGRWAPQKGAVNGLHILRLPFEE-GSKGE 517
            +E E +ET AEKR+RLAK+Y+  +   M G+ED+          VD KD +   L+++ L+ASG L RALA     L       +  +GH+LS T V I+ +++  FTGSKD +I+++D+ TG +  T     +G +G+  H   VL +AVSSDG++LA+GG+DK I IW                          S L FR  S+ LYS S DR +K WN+D + Y+ETLFGHQ  I  +D   RE  VTC GRDR+VR+WK++DE+ ++ +   G  +    +   + GS+D ++++ EE++++G + G ++LW+  KKK V     AHG         WI+S+A++K +D+ A+GS DG +RLW+ +   +      T     +  PG +N L   H  ++      LVAA G+EH+LGRW   K A NG+ I+    ++ G +G+
Sbjct:   10 SEEEIQETPAEKRLRLAKKYIDNLRTDMVGNEDE-----FDAADVD-KDLIAERLQQDALEASGRLHRALADQFI-LPVQEGDIRKQRGHQLSVTSVAITANKKFVFTGSKDGSIIKWDVATGKKAHTFPGGRKGVKGFTGHTDHVLCLAVSSDGQYLASGGKDKLINIW--------------------------SGLAFRKGSNQLYSCSNDRSIKLWNIDELAYIETLFGHQDTITDIDTLSRENCVTCGGRDRTVRLWKIIDETQLVFR-GGGSKKDKNSQISFVEGSIDVISLIDEETFLSGSDSGTISLWSTTKKKAVFTYPVAHGIDELSQTPRWITSIASLKYSDVFATGSWDGQIRLWKLSKDLRSFAPLST-----IAMPGVINALKFNHDISMTSTKAYLVAAIGQEHKLGRWLRIKEAKNGVSIIEFTLDKSGQQGD 419          
The following BLAST results are available for this feature:
BLAST of NO08G01520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26654.14.200e-17965.89u3 small nucleolar rna-interacting protein 2 [Nann... [more]
GAX98365.16.400e-8747.74U3 small nucleolar RNA-interacting protein, putati... [more]
OWZ00983.11.600e-8244.73U3 small nucleolar RNA-interacting protein [Phytop... [more]
GAY06812.11.400e-7346.99U3 small nucleolar RNA-interacting protein, putati... [more]
PRW20874.11.200e-7239.66U3 small nucleolar RNA-interacting 2 [Chlorella so... [more]
GAX25970.13.400e-7237.47ribosomal RNA-processing protein 9 [Fistulifera so... [more]
GAX24411.11.300e-7137.47ribosomal RNA-processing protein 9 [Fistulifera so... [more]
XP_005848008.13.200e-7038.65hypothetical protein CHLNCDRAFT_22742 [Chlorella v... [more]
EJK62130.12.100e-6937.42hypothetical protein THAOC_17274 [Thalassiosira oc... [more]
ORX93890.12.500e-6736.75WD40 repeat-like protein [Basidiobolus meristospor... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008896NSK008896Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01520.1NO08G01520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100001g55gene3904Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01520.1NO08G01520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01520 ID=NO08G01520|Name=NO08G01520|organism=Nannochloropsis oceanica|type=gene|length=1990bp
AAAAAATAGCACCATGTCACGAAGAAAAATCTTCGGTGGCACCGGAGTGC
GCGGCCGGGGCCGTGGAGGAAGCCTCGGCAGTGGTGAACGCAGCACTACA
CGCGTTGGTGGTGGGCCAGGCGGTGCTTGGCGCGCCAGCTTTAACTTGGA
CCAGAGAAGCAGCCACAACAATGACGACGAGTACATTGACGATGTTGTCT
CAGGGTCCGAGGACGAGTTGCCGCGTAAAAAGGGCCGTGCGGCTGAGACA
GACACAGCCGAGATGGAGGACCGGGAGACGGCGGCGGAGAAACGCGTGCG
TCTAGCCAAGCAATACCTGGCACAAATGGAGGCAGCCATGGGCAGCGAAG
ACGATGGAGAGGGCTCAGGTGAAGGTGAAGATGACGTTGACGGAAAGGAT
GCGTTGGGCCTTCTGTTGGAAAAGGAACGGCTCAAGGCCTCTGGCTCGCT
CCGACGCGCCCTAGCCGGCAGCCTGAGTAATCTTGCCGCTGACAGCATTC
CTACCCAGGTTATAAAAGGGCATAAGCTTTCACCGACTTGTGTCACGATA
AGTAGAGACGAGCGCATTGCGTTTACGGGGAGCAAGGACAATGCCATTCT
GCAGTATGATTTGGAGACCGGTGTACGGACCGCCACGCTCTCCCCACACT
GGCGGGGTGGCCAGGGATACCAAGCCCACGAGAAGGAAGTGCTGGCAATA
GCGGTGTCATCGGACGGGAGGTTTCTAGCAGCAGGAGGGAGGGATAAGGA
GATTAGAATTTGGGATCTAAGGGAGCGGGGTGAGGGGAAAGGGCTGTCGC
TGAAGCCGGTGAAGACATTTGCGGGCCATCGGGATGCGGTTTCTGCGCTT
TGTTTTCGTGCGGACTCCCATGCGTTGTACTCGGGGTCGTTTGACCGGTG
TTTGAAGCATTGGAACATGGATGGGATGGTGTATGTCGAGACATTGTTTG
GGCATCAGGCGGAGATAAATGGCATGGATGCGTGGAGGAGGGAGCGACCG
GTGACCTGTGGGAGGGATCGGAGCGTGCGGGTGTGGAAATTGGTGGACGA
ATCACACATGTTGCTGAAATGCCCACAGGGTGTGGGAGAGGGAGGGGCGG
GGAGGGGTTTGGTGATGGGGGGGTCTTTGGATTGTGTGGCGATGCTATCG
GAGGAATCTTATGTAACGGGGGGGGAGGACGGAATGCTTGCTTTGTGGAA
TGTGAATAAGAAGAAGCCGGTGGCGATCGTGTCAAATGCACATGGAGGGG
CCGGGCATTGGATAAGTAGTGTTGCGACGATCAAGGGGACGGATTTAGTG
GCTTCAGGGTCGGATGATGGGGTGGTGCGGCTATGGCAGGCGACGACAAC
AGCTCAAGGGCAGGGGTCATCTTTGACATTCACAGGCACGATGTTGCCGG
CTCCGGGGTTTGTGAATGGCTTGGCGCTTGGTCATTCGGGAACATTGTTG
GTAGCGGCGTGTGGGAAAGAGCATCGCTTGGGAAGGTGGGCGCCGCAGAA
AGGAGCGGTAAATGGACTGCATATCCTGAGGTTGCCATTTGAGGAGGGGA
GTAAGGGAGAGGGGCGTAGTGGTGGTAGTAGTGGTGGTGAGAGTGGAAGC
GAAGAGGAGGATGAAGAGGATGAGGAGGAAGGGGAGGAGGAGGAGTATCC
TAATATGGGGGAGAACGAGGATGGAGAGGGAGTGGAAGAGGAGGAAGGGG
AGGAGGAGGAAGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGATGA
CGACGATGACGACGAGTGAACAAATCCATTCCAAATCCAATATTCCCCCC
CTTCTCAATCTTGTAAAGAGGTCCCGAAAACTTACAAAACGTAAATGCTC
GCGTCAAGTCTAGAGCATAATCTGAAAAAGAAGTAGATCAGAGAATGCGT
CAGCAAAGCATATTTTTTACAAGTAAGCGAAGCATGCTCA
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protein sequence of NO08G01520.1

>NO08G01520.1-protein ID=NO08G01520.1-protein|Name=NO08G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=602bp
MSRRKIFGGTGVRGRGRGGSLGSGERSTTRVGGGPGGAWRASFNLDQRSS
HNNDDEYIDDVVSGSEDELPRKKGRAAETDTAEMEDRETAAEKRVRLAKQ
YLAQMEAAMGSEDDGEGSGEGEDDVDGKDALGLLLEKERLKASGSLRRAL
AGSLSNLAADSIPTQVIKGHKLSPTCVTISRDERIAFTGSKDNAILQYDL
ETGVRTATLSPHWRGGQGYQAHEKEVLAIAVSSDGRFLAAGGRDKEIRIW
DLRERGEGKGLSLKPVKTFAGHRDAVSALCFRADSHALYSGSFDRCLKHW
NMDGMVYVETLFGHQAEINGMDAWRRERPVTCGRDRSVRVWKLVDESHML
LKCPQGVGEGGAGRGLVMGGSLDCVAMLSEESYVTGGEDGMLALWNVNKK
KPVAIVSNAHGGAGHWISSVATIKGTDLVASGSDDGVVRLWQATTTAQGQ
GSSLTFTGTMLPAPGFVNGLALGHSGTLLVAACGKEHRLGRWAPQKGAVN
GLHILRLPFEEGSKGEGRSGGSSGGESGSEEEDEEDEEEGEEEEYPNMGE
NEDGEGVEEEEGEEEEGEEEEEEEEEEEEEEEEEEEEEEEEEEEDDDDDD
E*
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Synonyms
Publications