NO08G01470, NO08G01470 (gene) Nannochloropsis oceanica

Overview
NameNO08G01470
Unique NameNO08G01470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1879
Alignment locationchr8:460817..462695 -

Link to JBrowse

Properties
Property NameValue
DescriptionRetinol dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:460817..462695 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO08G01470 vs. NCBI_GenBank
Match: EWM26706.1 (retinol dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 637.9 bits (1644), Expect = 2.100e-179
Identity = 300/379 (79.16%), Postives = 335/379 (88.39%), Query Frame = 0
Query:   11 IESMAVTVDMSPVSLSPELEKAPEPLLSRLNNFLHSNIYVYLITYYLFWLGFWLIMPLAGFFTMLGFGLYDLFTAKGFRKPCGPVLITGTSSGFGLDLTLQLAAQGWKVYACVRKGADLAPFARYPNVKGLIMDVTNEEQIRAAIATVEAECP-EGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGKEGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNMPFLALPRRIMNKLEDGAPFAKMIPAGAVDRD 389
            +E M+ TVD+      P  E+  EPLLSRLNNFLHSNIYVY+ITYYL+WLGFWL +P+  FFTMLGFGLYDLFTAKGFRKPCGPVLITG SSGFGLDLT+ LAAQGWKVYACVR+ AD+APF+  PNVKGLI+DVTNEEQ+RAA ATV+ E P EGLYALVNNAG+E YGTTDWC LDYFK+HMDVNYYGPIR+TK ALPLLK++G+ G   ARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMR FN+++TV+NPSWH TRCALPPK+KLL  FRAAPP VQ DYGE YV+EAA+EAY GRQWFTW PENVGRVMLWAVTAE+YRPQY+VG+DARFVNMPFLALPRRIMN LED APF+KM+PA A+ R+
Sbjct:    5 VEIMSTTVDIPSAPSKP--EEKHEPLLSRLNNFLHSNIYVYIITYYLYWLGFWLFIPVVAFFTMLGFGLYDLFTAKGFRKPCGPVLITGCSSGFGLDLTMALAAQGWKVYACVRREADMAPFSNNPNVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFEHYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGSAAARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDYGEPYVVEAAEEAYTGRQWFTWKPENVGRVMLWAVTAERYRPQYIVGLDARFVNMPFLALPRRIMNNLEDAAPFSKMLPAAAIHRE 381          
BLAST of NO08G01470 vs. NCBI_GenBank
Match: EWM26631.1 (NAD(P)-binding domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 263.1 bits (671), Expect = 1.400e-66
Identity = 135/272 (49.63%), Postives = 178/272 (65.44%), Query Frame = 0
Query:   34 EPLLSRLNNFLHSNIYVYLITYYLFWLGFWLIMPLAGFFTMLGFGLYDLFTAKGFRKPCGPVLITGTSSGFGLDLTLQLAAQGWKVYACVRKGADLAPFARYPNVKGLIMDVTNEEQIRAAIATVEAECP-EGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGK-EGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADY 304
            E LLS+LN+FL ++ YV    YY FW  FWL MP      ++   LYD  T KG RKP GPVLITG  SGFG  L L L+  GW VYA       +  FA+   V  LIMDVT EE +RA +A V+A  P EGLYALVNNAG +++GTTDWC +++++ HM++N++G +R+ K ALPLLK+  +      +RI+NI S SGLLPGL +K  Y ASKHAAE+WSNSLR E+R F +++  +NP WH T  A   +D L+  + +   ++QADY
Sbjct:   50 ETLLSQLNSFLSAD-YVSDWAYYGFWFVFWLFMPYVVLGGIVFMALYDAVTCKGNRKPVGPVLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYFAKNGKVTALIMDVTKEEDVRAVMAKVDAAHPKEGLYALVNNAGVDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEIAHSQRDHLVRIYESLSGDLQADY 320          
BLAST of NO08G01470 vs. NCBI_GenBank
Match: EWM26619.1 (retinol retinaldehyde reductase [Nannochloropsis gaditana])

HSP 1 Score: 247.3 bits (630), Expect = 7.900e-62
Identity = 135/346 (39.02%), Postives = 198/346 (57.23%), Query Frame = 0
Query:   34 EPLLSRLNNFLHSNIYVYLITYYLFWLGFWLIMPLAGFFTMLGFGLYDLFTAKGFRKPCGPVLITGTSSGFGLDLTLQLAAQGWKVYACVRKGADLAPFARYP-----NVKGLIMDVTNEEQIRAAIATVEAECPEGLYALVNNAG---YEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGK-AGKEGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNMPFLALPRRIMNKL 371
            + ++S+LN+F+H + Y+  I +Y FWLGFW+ MP       L   +YDL TA+G+R+PCGPVL+TG  +GFG  L L LA + WKV A       +  + R P     N+  + +D++N+++I+A    + A+ PEGLYALVNN       + G  +W  +D +K+HM+VN Y  IR TK  LPLLKK+ + A +   RI+ +NS +G++PG P    Y+ +KHA +AW +SL  E   + +E   + P WH         D     F   P  VQ +YG +Y  +  + +   R    W  ENV   ++ AVTAEK RP  +VG+D RF+  P L LPRR+ N +
Sbjct:   26 QSIISKLNDFVHRD-YITDIVFYGFWLGFWVFMPPVILLGTLLLAVYDLITARGYRQPCGPVLVTGCDTGFGKALALALAERHWKVIAACSTDTGVKSY-REPANGSMNIDPIKLDLSNDDEIQACAELLAAQYPEGLYALVNNNNNTVVGKDGLVEWMTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRCKPRIVTLNSNAGIVPGQPNASCYAVAKHACDAWMSSLTFEANVWGIEAATVCPCWHEIDIDYFQHD----VFARLPLRVQEEYGRQYYNKVMESSKALRNPIMWKAENVTHALVHAVTAEKLRPYVVVGIDGRFLMSPLLLLPRRLYNTI 365          
BLAST of NO08G01470 vs. NCBI_GenBank
Match: EWM28695.1 (retinol retinaldehyde reductase [Nannochloropsis gaditana])

HSP 1 Score: 196.1 bits (497), Expect = 2.100e-46
Identity = 122/339 (35.99%), Postives = 182/339 (53.69%), Query Frame = 0
Query:   41 NNFLHSNIYVYLITYYLFWLGFWLIMPLAGFFTMLGFGLYDLFTAKGFRKPC--------GPVLITGTSSGFGLDLTLQLAAQGWKVY-ACVRKGADLAPFARYPNVKGLIMDVTNEEQIRAAIATVEAECPEGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGKEGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNMPFLALPRRIMNKL 371
            NN  H ++    I +Y ++ G WL+ P   F  +    +YD     GF  P           + ITG  +GFG  L ++LA +G++VY AC+         A    V+ +++DVT+E Q++ A A V+AE PEGLYALVNNAG  + G  DW GL  F+  M+VN++G + +TK  LPL+K+         RI+ ++S +G+  G PL   YSASKHA E +++SLRQE+R + ++++ INP +H T         L   +    P +QA YG+ Y     D      +   ++P NV R M  AVT  + R QY VG+DA++  +     P R+  KL
Sbjct:    9 NNLCHIDLLEEWI-WYSYFTGAWLLGPFMAFLIV----VYDF--CSGFAFPLWHVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECSTVETMMLDVTDENQVQEAAARVDAENPEGLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRC------KGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKL 334          
BLAST of NO08G01470 vs. NCBI_GenBank
Match: EWM28666.1 (retinol retinaldehyde reductase [Nannochloropsis gaditana])

HSP 1 Score: 189.5 bits (480), Expect = 2.000e-44
Identity = 116/336 (34.52%), Postives = 184/336 (54.76%), Query Frame = 0
Query:   36 LLSRLNNFLHSNIYVYLITY-YLFWLGFWLIMPLAGFFTMLGFGLYDLFTAKGFRKPCGP--VLITGTSSGFGLDLTLQLAAQGWKVYA-CVRKGADLAPFARYPNVKGLIMDVTNEEQIRAAIATVEAECPEGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGKEGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNMPFLAL-PRRI 367
            L++  NN  H  ++  +  Y + FW  FW   PL G    L       F +  + +P     V+ITG  +GFG  L L L  +G+KVYA C+ + +          ++ +I+DVT E+Q+ +  A + A  P+G++ALVNNAG  + G  DW  +  F+  M+VNY+  + +TK  LP LK      K   RII ++S +G+  G P+   YS+SKHA E ++++LRQE+R + + ++ INP +H T         L  +F  AP E+Q +YGEEY+   A+      +    +P+NV R  + A+T+ + + QY VG+DA+ +  PFL + P R+
Sbjct:    3 LINWANNVAHIPVFEDMCYYNFFFWAWFW--GPLLGALVFLHDATTGFFFSIFYVEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKECDALQTIILDVTKEDQVASVAARISAAHPQGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLK------KSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAKGL-FPFLQIFPLRV 329          
BLAST of NO08G01470 vs. NCBI_GenBank
Match: EWM25060.1 (serine threonine-protein kinase dclk3 [Nannochloropsis gaditana])

HSP 1 Score: 174.9 bits (442), Expect = 5.000e-40
Identity = 115/343 (33.53%), Postives = 181/343 (52.77%), Query Frame = 0
Query:   36 LLSRLNNFLHSNIYVYLITYYLFWLGFWLIMPLAGFFTMLGFGLYDLFTAKGFR--KPCG-PVLITGTSSGFGLDLTLQLAAQGWKVYA-CVRKGADLAPFARYPNVKG----LIMDVTNEEQIRAAIATVEAECPEGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGKEGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNMPFLALPRRIMNKL 371
            +L+ +N+ +H  I V  I ++L+     L+ PL     ++ F +  L  A   R  +P G  VLITG  +GFG DL + L  +GW+VYA C+ + A      +     G    ++MDVT +  I   +  +  E P+ L+A+V NAG  + G  DW  L  ++  M+VN +  I   K  LPLLK      +   RI+N+ S +G+  G P    Y+ASKHAAEA+S SLR E+  + + +  +NPS+H TR +    + + +++     + QA+YG EY L A  +  + +    W+P +V   ++ A TA   R QY+VG DA F  +P + LP   + K+
Sbjct: 1210 MLNLMNDIMHLPI-VDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSGALVTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQLFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLK------ESKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEYGLEY-LRAVQKLTSDQTDGCWDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLPTPDIEKI 1544          
BLAST of NO08G01470 vs. NCBI_GenBank
Match: XP_002180228.1 (3-hydroxybutyrate dehydrogenase [Phaeodactylum tricornutum CCAP 1055/1] >EEC48419.1 3-hydroxybutyrate dehydrogenase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 140.2 bits (352), Expect = 1.400e-29
Identity = 98/352 (27.84%), Postives = 158/352 (44.89%), Query Frame = 0
Query:   33 PEPLLSRLNNFLHSNIYVYLITYYLFWLGFWLI-MPLAGFFTMLGFGLYDLF-----TAKGFRKPCG------PVLITGTSSGFGLDLTLQLAAQGWKVYACVRKGADLAPFARYPNVKGLIMDVTNEEQIRAAIATV--------EAECPEGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGK-EGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNMPFLALP 364
            P P + +LN+ LH + +   ITY +FW    L+  PLA     L   +  L      T K    P         V++TG  +GFG ++    A  G+ V+A          F   P +K + M+V N+  ++  +  V        E +    L+AL+NNAG    G  DW  +  F+ +MDVN +G IR  K  L + K+    G   G RI+N+ S +GL P +     Y+ASKHAA  ++  LR EM  F V++  +NPS+H T      ++ +   +    P ++  YG +Y         +    ++WN   V    +  +   +   +  +G+D RF  +    +P
Sbjct:    5 PGPAVQKLNSVLHRDPF-SSITYAVFWSLVLLVGAPLAIVVLQLQLIVRLLLWVTGQTGKSHYSPRTQSKLEMAVVVTGCDTGFGTEIAFWAAQAGFHVFAGCLLKESFGQFENCPAIKPIQMNVCNDNDVQEVVKQVVTWLDGGGEKKKQRVLHALINNAGIGDGGLIDWLDISVFQRNMDVNCFGMIRTCKAFLSIFKQQAIDGSHRGGRIMNLTSMAGLCPPMAAMAAYAASKHAANVFTRGLRNEMAGFGVQVCSLNPSFHKTPLVTGMQNNITSVYNGLSPTLRNQYGSDYFDTLKISLVDIPHSWSWNTNVVAEQAVSLLEINQLPAEVPIGLDGRFALLILRMIP 355          
BLAST of NO08G01470 vs. NCBI_GenBank
Match: XP_002599606.1 (retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae] >EEN55618.1 retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae])

HSP 1 Score: 139.8 bits (351), Expect = 1.800e-29
Identity = 98/278 (35.25%), Postives = 152/278 (54.68%), Query Frame = 0
Query:   95 VLITGTSSGFGLDLTLQLAAQGWKVYACVRKGADLAPFAR--YPNVKGLIMDVTNEEQIRAAIATV-EAECPEGLYALVNNAGYEQY--GTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGKEGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLL----ESFRAAPPEVQADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNMPFLALP 364
            VLITG  +GFG  L  +L   G +V+A     A +A   +     ++ + MDV++ + ++ A   V EA   +GL+ LVNNAG      GTT+W  L+ ++  ++VN  G I +TKT LPLLK      K   R++N+ S +G +   PL   Y+ SK+  EA+S+ LR+ MR F V++ +I P     R  +   D +L    ++++   PE +A+YGEE++  A D+   G + F  +P  V   M  A+ A   R +Y+VG DARF+ +P   LP
Sbjct:   37 VLITGCDTGFGNLLARRLDQLGLRVFAGCLTEAGVAELRQSCSERLQPIRMDVSSSDSVQDAFRVVKEAVGSKGLHGLVNNAGVTGVFGGTTEWATLEDYQAVLNVNLLGMIDVTKTFLPLLK------KSRGRVVNVASAAGRMAN-PLGVPYTVSKYGVEAFSDCLRRAMRCFGVKVHIIEPG--LFRTDMTNHDIILRRLDQTWQRQTPETKAEYGEEFLQAAKDDIIFGTR-FLQDPVAVVDAMEHALCATHPRSRYVVGWDARFITVPTSWLP 304          
BLAST of NO08G01470 vs. NCBI_GenBank
Match: WP_064231540.1 (oxidoreductase [Actinomycetaceae bacterium BA112] >OAP86909.1 short-chain dehydrogenase/reductase [Actinomycetaceae bacterium BA112])

HSP 1 Score: 139.8 bits (351), Expect = 1.800e-29
Identity = 96/283 (33.92%), Postives = 141/283 (49.82%), Query Frame = 0
Query:   95 VLITGTSSGFGLDLTLQLAAQGWKVYACVRKGADLAPFARYPNVKGLIMDVTNEEQIRAAIATVEAECPEGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGKEGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNMPFLALPRRIMNKLEDGAPFA 378
            +LITG SSG G +   +LA+QG  VY   R+   +A    Y  V  + +DVT+EE  + A+  V AE    +  LVNNAGY  YG  +   +D  +   DVN +G   LTK ALP +++     +    I+N++S  G L    + G Y A+K+A EA S++LR E   F +++ +I P    T  A    D L ES +    E  A        E     Y+G+     +P+ V R +  AV A++ RP+YLVG  A+ +      LP R  + +   A FA
Sbjct:   16 ILITGASSGMGFEAAKELASQGHSVYGAARRVERMAQLTEY-GVHTIELDVTDEEACKDAVGRVVAERGR-IDVLVNNAGYGSYGAIEDVEIDEARRQFDVNVFGLAALTKAALPHMRE-----RRSGTIVNVSSMGGRLVSF-MGGWYHATKYAVEALSDALRMEAAEFGIDVVLIEPGGIKTEWADIAADHLAESSKGGAYEQTA----VKTAEGMRRQYSGKMMS--DPDVVVRAISRAVNAKRPRPRYLVGFGAKPLVAAHAMLPTRAFDWVMKRAVFA 284          
BLAST of NO08G01470 vs. NCBI_GenBank
Match: XP_002112787.1 (hypothetical protein TRIADDRAFT_35982 [Trichoplax adhaerens] >EDV24897.1 hypothetical protein TRIADDRAFT_35982 [Trichoplax adhaerens])

HSP 1 Score: 138.7 bits (348), Expect = 4.000e-29
Identity = 85/268 (31.72%), Postives = 138/268 (51.49%), Query Frame = 0
Query:   95 VLITGTSSGFGLDLTLQLAAQGWKVYAC--VRKGADLAPFARYPNVKGLIMDVTNEEQIRAAIATVEAECP--EGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGKEGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADYGEEYVLEAADEAYN-GRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNM 358
            VLITG  SGFG  L+++L   G  + AC   ++G +         +  +I+DVTN + I  A+  V    P  +GL+ +VNNAG    G  +W  L   +   +VN +G + +TK  LPL+K       +  RI+N+ S  G    +P    YS SK A EA+S+SLR+EM+ FNV + +I P +  T      +D+ L+ +      ++ DYG+ +  E   +     R   + N   V + +  A+ + K R +YLVG++A  +++
Sbjct:   29 VLITGCDSGFGRKLSIELDLCGCNIIACCLTKRGVEDLTSICSNRLYPIIVDVTNSDDIHRAVDLVGKHLPMGKGLWGMVNNAGIASTGAIEWTPLSKLRQIFNVNVFGMVEMTKAMLPLIK------IDQGRIVNLASMLGRF-SVPYSASYSMSKFAVEAFSDSLRREMKLFNVSVHIIEPGFFKTHILDNLEDEFLQLYHNCNSTIRQDYGDHFAKEGVKKITEFNRSRASNNIAKVTKAIKNALFSPKPRERYLVGLEANILSL 289          
The following BLAST results are available for this feature:
BLAST of NO08G01470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26706.12.100e-17979.16retinol dehydrogenase [Nannochloropsis gaditana][more]
EWM26631.11.400e-6649.63NAD(P)-binding domain containing protein [Nannochl... [more]
EWM26619.17.900e-6239.02retinol retinaldehyde reductase [Nannochloropsis g... [more]
EWM28695.12.100e-4635.99retinol retinaldehyde reductase [Nannochloropsis g... [more]
EWM28666.12.000e-4434.52retinol retinaldehyde reductase [Nannochloropsis g... [more]
EWM25060.15.000e-4033.53serine threonine-protein kinase dclk3 [Nannochloro... [more]
XP_002180228.11.400e-2927.843-hydroxybutyrate dehydrogenase [Phaeodactylum tri... [more]
XP_002599606.11.800e-2935.25retinol dehydrogenase, retinaldehyde reductase [Br... [more]
WP_064231540.11.800e-2933.92oxidoreductase [Actinomycetaceae bacterium BA112] ... [more]
XP_002112787.14.000e-2931.72hypothetical protein TRIADDRAFT_35982 [Trichoplax ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008902NSK008902Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01470.1NO08G01470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582274gene_3474Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g51gene3908Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01470.1NO08G01470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01470 ID=NO08G01470|Name=NO08G01470|organism=Nannochloropsis oceanica|type=gene|length=1879bp
ATGACCTCCGTGGGCACGAAAAAGGAAAATATTGAGAGTATGGCTGTCAC
CGTGGACATGTCCCCGGTCTCATTGTCGCCCGAGCTTGAGAAAGCACCAG
AACCTCTCCTGAGCAGGCTCAACAACTTTCTGCATAGCAACATTTATGTG
TACCTGATAACGTACTACCTCTTCTGGCTGGGTTTCTGGCTGATCATGCC
TCTTGCGGGCTTTTTTACCATGCTGGGTTTTGGTTTATACGATCTCTTCA
CTGCCAAGGGGTTCCGCAAGCCATGCGGGCCCGTGCTTATCACGGGCACA
AGTTCGGGCTTCGGCTTGGACTTGACCCTGCAGCTGGCTGCTCAAGGCTG
GAAGgtacgtgcaatccttgtaaaagttgtatttttccttattaagatat
tatctgaagcaccagccttctgtttctgacgctctatctccgggcctccg
tacctccttgcttagGTCTACGCCTGCGTACGGAAGGGGGCAGACCTGGC
GCCTTTCGCCCGCTACCCGAACGTCAAGGGCTTGATCATGGATGTGACAA
ACGAGGAGCAGATACGTGCTGCCATTGCCACGGTCGAAGCGGAATGTCCC
GAGGGCCTGTACGCGCTCGTTAACAATGCCGgtaagaaaggaacgttacc
attgctttcatgcgggatttcattcttcttctggataattttctgttatt
ccttacttatttttatagGATACGAACAGTACGGCACCACTGATTGGTGT
GGCCTGGACTACTTTAAACTgtgcgtactttctcctcccccgttcccctc
ctcctttcccccccctcctgccttatccatcccctgtgacaccgatgaca
tgattgtaatacagGCACATGGATGTGAATTACTACGGTCCTATCCGTCT
GACCAAAACCGCGCTGCCCTTGCTAAAAAAGCACGGCAAGGCTGGGAAGG
AAGGGGCGCGCATCATCAACATCAATTCGACAAGCGGGCTCTTGCCGGGT
TTGCCTCTAAAAGGCGgtaagtgtgctagctattacaccaaaactttatc
atgattttttgcctcttttgttcgtcaagtccttcatgtgacaggtctta
atgtttaccctctccctgcctccctccttgcctccctccttgcctccctg
cctccctccctctttcagGCTACAGCGCCTCTAAGCACGCCGCCGAGGCC
TGGTCCAACTCCCTGCGTCAGGAAATGCGTCGTTTTAATGTCGAGATCAC
TGTGATCAACCCCTCTTGGCACGCGACCCGTTGCGCCCTACCCCCCAAAG
ACAAGCTCCTGGAGAGCTTTCGGGCGGCGCCTCCGGAGGTGCAAGCAGAC
TATGGGGAGGAGTACGTGCTGGAGGCGGCCGATGAAGCATACAATGGCAG
GCAGTGGTTCACCTGGAATgtaagaggtggaagggggacatgggagagag
gagggaggcagtgtcaaggccagccctgaaaccgtcccgttcgtcttgcc
cccgcttctgtcaggttctcacctttttctttctgatttcttctccttgc
ttcctgcattcacgtaacgaacagCCCGAAAATGTTGGTCGTGTCATGCT
GTGGGCCGTTACTGCCGAGAAATACAGACCCCAGTATCTCGTCGGCATGG
ACGCTCGCTTTGTCAACATGCCTTTCTTGGCCCTCCCCCGCAGgtaaagc
atgagtgggagcagcaaggagggacattttttttcttatgacaagagcta
caatttattgccccctttctacgttaatcttcttttttccctttctacat
ttccagGATCATGAACAAGTTGGAGGATGGCGCGCCGTTTGCGAAGATGA
TTCCCGCTGGGGCAGTCGATCGGGATTAA
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protein sequence of NO08G01470.1

>NO08G01470.1-protein ID=NO08G01470.1-protein|Name=NO08G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=389bp
MTSVGTKKENIESMAVTVDMSPVSLSPELEKAPEPLLSRLNNFLHSNIYV
YLITYYLFWLGFWLIMPLAGFFTMLGFGLYDLFTAKGFRKPCGPVLITGT
SSGFGLDLTLQLAAQGWKVYACVRKGADLAPFARYPNVKGLIMDVTNEEQ
IRAAIATVEAECPEGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGP
IRLTKTALPLLKKHGKAGKEGARIININSTSGLLPGLPLKGGYSASKHAA
EAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQ
ADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGM
DARFVNMPFLALPRRIMNKLEDGAPFAKMIPAGAVDRD*
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