NO08G01340, NO08G01340 (gene) Nannochloropsis oceanica

Overview
NameNO08G01340
Unique NameNO08G01340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2481
Alignment locationchr8:404582..407062 -

Link to JBrowse

Properties
Property NameValue
DescriptionEnoyl-CoA hydratase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:404582..407062 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR029045ClpP/crotonase-like_dom
IPR001753Crotonase_core_superfam
Homology
[Close]
BLAST of NO08G01340 vs. NCBI_GenBank
Match: WP_054152361.1 (enoyl-CoA hydratase [beta proteobacterium AAP51] >KPF59934.1 enoyl-CoA hydratase [beta proteobacterium AAP51])

HSP 1 Score: 272.3 bits (695), Expect = 1.900e-69
Identity = 141/246 (57.32%), Postives = 174/246 (70.73%), Query Frame = 0 
Query:   71 GYLVVTLNRPRHSNAMSTAILHDLQAVFDKLPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFMLSIQRVPQPVVAAVNGLATGAGCQLVAACDLAVASSRAEFGTSGVKLGLFCATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAEVLRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGAYDMADYVMSANMTEADTEEGIAAFVEKRPPAW 317
            G + +TLNRP   NA+S  ++  LQA  D +  D+ VR VVL   G AFC GHDL +M  ++  + Y+ER+FA+C R M+S+Q++P PVVA V GLAT AGCQLVA CDLAVAS  A F  SGV LGLFC+TPSV LSRNLSRK AFEMLVTG++I+A++A + GLVN+V D  +LDAEV RLV  I   P VA+AMGK LFY QLE   IA AY+ A   M+ NM +    EG+ AF+EKRPP W
Sbjct:   15 GVVTLTLNRPLAFNALSEGLIEALQAALDAVARDEQVRVVVLAAAGKAFCAGHDLKEMR-AEPSQAYYERLFAQCGRMMMSLQQLPVPVVARVQGLATAAGCQLVAMCDLAVASREARFAVSGVNLGLFCSTPSVALSRNLSRKAAFEMLVTGDFISAEQAREQGLVNRVVDAAELDAEVARLVERIAAKPRVALAMGKALFYRQLE-GGIAAAYEDAARTMACNMMDESALEGVQAFIEKRPPRW 258
[Close]
BLAST of NO08G01340 vs. NCBI_GenBank
Match: WP_031460084.1 (enoyl-CoA hydratase [Chloroflexus sp. MS-G])

HSP 1 Score: 269.6 bits (688), Expect = 1.200e-68
Identity = 141/248 (56.85%), Postives = 175/248 (70.56%), Query Frame = 0 
Query:   69 HGGYLVVTLNRPRHSNAMSTAILHDLQAVFDKLPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFMLSIQRVPQPVVAAVNGLATGAGCQLVAACDLAVASSRAEFGTSGVKLGLFCATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAEVLRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGAYDMADYVMSANMTEADTEEGIAAFVEKRPPAW 317
            H G + +TLNRPR  NA+S  +L  LQ   D +  D   R VVL G G AFC GHDL QM  +  ++ Y+E +FA+CS+ ML+IQR+PQPV+A V+G+AT AGCQLVA CDLAVAS+ A F  SG+ +GLFC+TPSV LSRN+ RK AFEMLVTG +I+A+ A   GLVN+V    +LDAEV RLV  I+  PAV+IA+GK LFY QLE   I  AY +A   M+ NM E   +EG+AAFVEKRPP W
Sbjct:   18 HRGVVSLTLNRPRQFNALSEEMLAALQNELDMISADPQARVVVLAGAGKAFCAGHDLKQM-QAHPEQSYYEDLFARCSQMMLTIQRMPQPVIARVHGIATAAGCQLVAMCDLAVASTEARFAVSGINVGLFCSTPSVALSRNIGRKAAFEMLVTGAFIDAETAQRLGLVNRVVPPAELDAEVQRLVDAILAKPAVSIAIGKSLFYRQLE-LPIEEAYRIAGQTMACNMMEPCAQEGVAAFVEKRPPVW 263
[Close]
BLAST of NO08G01340 vs. NCBI_GenBank
Match: WP_015940776.1 (enoyl-CoA hydratase [Chloroflexus aggregans] >ACL24917.1 Enoyl-CoA hydratase/isomerase [Chloroflexus aggregans DSM 9485])

HSP 1 Score: 268.9 bits (686), Expect = 2.100e-68
Identity = 139/246 (56.50%), Postives = 177/246 (71.95%), Query Frame = 0 
Query:   71 GYLVVTLNRPRHSNAMSTAILHDLQAVFDKLPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFMLSIQRVPQPVVAAVNGLATGAGCQLVAACDLAVASSRAEFGTSGVKLGLFCATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAEVLRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGAYDMADYVMSANMTEADTEEGIAAFVEKRPPAW 317
            G   +TLNRPR  NA+S  +L  LQA  D + T+  VR VVL G G AFC GHDL QM  +  D+ Y+E +FA+CS+ ML+IQR+PQPV+A V+G+AT AGCQLVA CDLAVASS A+F  SG+ +GLFC+TPSV LSRN+ RK AFEMLVTGE+I+A+ A   GLVN+V   ++LDA + +LV  I+  PA +IA+GK LFY Q+E   +A AY +A   M+ NM E   +EG+ AFVEKRPP W
Sbjct:   20 GVARITLNRPRQFNALSEEMLAALQAQLDAIATNPHVRVVVLAGAGKAFCAGHDLKQML-AHPDQHYYEDLFARCSQMMLTIQRMPQPVIARVHGIATAAGCQLVAMCDLAVASSEAKFAVSGINVGLFCSTPSVALSRNIGRKAAFEMLVTGEFIDAETAHHLGLVNRVAPPDQLDATIEQLVDAILSKPAESIAIGKSLFYRQIE-LPMAEAYQLAGQTMACNMMEPCAQEGVTAFVEKRPPVW 263
[Close]
BLAST of NO08G01340 vs. NCBI_GenBank
Match: WP_028458311.1 (enoyl-CoA hydratase [Chloroflexus sp. Y-396-1])

HSP 1 Score: 268.1 bits (684), Expect = 3.500e-68
Identity = 140/248 (56.45%), Postives = 175/248 (70.56%), Query Frame = 0 
Query:   69 HGGYLVVTLNRPRHSNAMSTAILHDLQAVFDKLPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFMLSIQRVPQPVVAAVNGLATGAGCQLVAACDLAVASSRAEFGTSGVKLGLFCATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAEVLRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGAYDMADYVMSANMTEADTEEGIAAFVEKRPPAW 317
            H G + +TLNRPR  NA+S  +L  LQ+  D +  D   R VVL G G AFC GHDL QM  +  ++ Y+E +F +CS+ ML+IQR+PQPV+A V+G+AT AGCQLVA CDLAVAS+ A F  SG+ +GLFC+TPSV LSRN+ RK AFEMLVTG +I+A+ A   GLVN+V    +LDAEV RLV  I+  PA +IA+GK LFY QLE   I  AY +A   M+ NM E   +EG+AAFVEKRPPAW
Sbjct:   18 HRGVVSLTLNRPRQFNALSEEMLAALQSELDAIAADPQARVVVLAGAGKAFCAGHDLKQM-QAHPEQSYYEDLFDRCSQMMLTIQRMPQPVIARVHGIATAAGCQLVAMCDLAVASTEARFAVSGINVGLFCSTPSVALSRNIGRKAAFEMLVTGAFIDAETAQRLGLVNRVVPPAELDAEVQRLVDAILSKPAESIAIGKSLFYRQLE-LPIEEAYRIAGQTMACNMMEPCAQEGVAAFVEKRPPAW 263
[Close]
BLAST of NO08G01340 vs. NCBI_GenBank
Match: WP_087079149.1 (enoyl-CoA hydratase [Mycobacterium dioxanotrophicus] >ART71784.1 enoyl-CoA hydratase [Mycobacterium dioxanotrophicus])

HSP 1 Score: 266.5 bits (680), Expect = 1.000e-67
Identity = 140/246 (56.91%), Postives = 174/246 (70.73%), Query Frame = 0 
Query:   71 GYLVVTLNRPRHSNAMSTAILHDLQAVFDKLPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFMLSIQRVPQPVVAAVNGLATGAGCQLVAACDLAVASSRAEFGTSGVKLGLFCATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAEVLRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGAYDMADYVMSANMTEADTEEGIAAFVEKRPPAW 317
            G + +TLNRPR  NA+S A+L  L    D L TD+ VRAVVL  +G AFC GHDL +M  ++  ++Y+E++FA+C+  MLSIQR+P PV+A VNG+AT AGCQLVA CDLAVAS  A F  SGV +GLFCATP V LSRN+ RK AFEMLVTG++I A++A   GLVN+V   + LD EV  L+  IV  PAVAIAMGK LFY Q+E   I  AYD A   M+ NM +    EG+ AF+EKRPP+W
Sbjct:   14 GVVTLTLNRPRAFNALSEAMLTALGEALDGLATDEAVRAVVLAASGKAFCAGHDLKEMR-AEPSRQYYEQLFAQCTAVMLSIQRLPVPVIARVNGIATAAGCQLVAMCDLAVASDDARFAVSGVNVGLFCATPGVALSRNVPRKAAFEMLVTGDFIAAEQARALGLVNRVVPADALDGEVEALIASIVAKPAVAIAMGKALFYRQIE-VGIKAAYDDAGTTMACNMMDPSALEGVEAFIEKRPPSW 257
[Close]
BLAST of NO08G01340 vs. NCBI_GenBank
Match: WP_054137944.1 (MULTISPECIES: enoyl-CoA hydratase [unclassified Betaproteobacteria (miscellaneous)] >KPF48566.1 enoyl-CoA hydratase [beta proteobacterium AAP65] >KPF99045.1 enoyl-CoA hydratase [beta proteobacterium AAP121])

HSP 1 Score: 265.0 bits (676), Expect = 3.000e-67
Identity = 136/246 (55.28%), Postives = 173/246 (70.33%), Query Frame = 0 
Query:   71 GYLVVTLNRPRHSNAMSTAILHDLQAVFDKLPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFMLSIQRVPQPVVAAVNGLATGAGCQLVAACDLAVASSRAEFGTSGVKLGLFCATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAEVLRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGAYDMADYVMSANMTEADTEEGIAAFVEKRPPAW 317
            G   +TLNRP+  NA+S  ++  LQA   +L  D  V+ VVL   G AFC GHDL +M  ++  + Y+ER+FA+C R M+++Q++P PVVA V G+AT AGCQLVA CDLAVAS  A+F  SGV LGLFC+TPSV LSRNL RK AFEMLVTG++I+AD+A + GLVN+V D  +LDAEV RLV  I   P VA+A+GK LFY QLE   IA AY+ A   M+ NM +    EG+ AF++KRPP W
Sbjct:   15 GVATLTLNRPQAFNALSEGLIEALQAALVRLAADDAVKVVVLAAAGRAFCAGHDLKEMR-AEPSQAYYERLFAQCGRMMMALQQLPVPVVARVQGIATAAGCQLVAMCDLAVASRDAKFAVSGVNLGLFCSTPSVALSRNLGRKAAFEMLVTGDFISADEARERGLVNRVVDAAELDAEVARLVERIAAKPRVALALGKALFYRQLE-GGIAAAYEDAARTMACNMMDESALEGVQAFIDKRPPRW 258
[Close]
BLAST of NO08G01340 vs. NCBI_GenBank
Match: WP_047907307.1 (enoyl-CoA hydratase [Pandoraea faecigallinarum] >AKM31525.1 enoyl-CoA hydratase [Pandoraea faecigallinarum])

HSP 1 Score: 264.6 bits (675), Expect = 3.900e-67
Identity = 142/261 (54.41%), Postives = 175/261 (67.05%), Query Frame = 0 
Query:   56 PPVLVERRSVAGTHGGYLVVTLNRPRHSNAMSTAILHDLQAVFDKLPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFMLSIQRVPQPVVAAVNGLATGAGCQLVAACDLAVASSRAEFGTSGVKLGLFCATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAEVLRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGAYDMADYVMSANMTEADTEEGIAAFVEKRPPAW 317
            P VLV R    G   G + +TLNRPRH NA+S A+L  LQ   D +  D  VR VVL   G AFC GHDL +M  +Q    Y+  +F +C+R ML++QR+PQPV+A V+G+AT AGCQLVA CDLAVA+S A F  SG+ +GLFCATP V LSRNLSRK+A EML+TG++I+A  A + GLVN+V   E+LDAEV  L   IV  PA A+A GK LFY Q E + I  AY MA   M+ NM EA   EG+ AF+EKR P W
Sbjct:   12 PLVLVSRGD--GEQSGVVTLTLNRPRHFNALSEAMLDALQRALDDVSRDDSVRVVVLAAAGAAFCAGHDLKEMR-AQPSLDYYRTLFNQCTRVMLTMQRMPQPVIARVHGIATAAGCQLVAMCDLAVATSAARFAVSGINVGLFCATPGVALSRNLSRKQAMEMLLTGDFIDAQTARERGLVNRVVPMERLDAEVATLCQAIVAKPAAAVAAGKGLFYRQAE-TGIEAAYQMAGQTMACNMMEACALEGVQAFIEKRAPDW 268
[Close]
BLAST of NO08G01340 vs. NCBI_GenBank
Match: WP_083164704.1 (enoyl-CoA hydratase [Mycobacterium aquaticum] >ORA35286.1 enoyl-CoA hydratase [Mycobacterium aquaticum])

HSP 1 Score: 264.6 bits (675), Expect = 3.900e-67
Identity = 139/246 (56.50%), Postives = 175/246 (71.14%), Query Frame = 0 
Query:   71 GYLVVTLNRPRHSNAMSTAILHDLQAVFDKLPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFMLSIQRVPQPVVAAVNGLATGAGCQLVAACDLAVASSRAEFGTSGVKLGLFCATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAEVLRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGAYDMADYVMSANMTEADTEEGIAAFVEKRPPAW 317
            G + +TLNRPR  NA+S A+L  L    D L TD  VRAVVL  +G AFC GHDL +M  ++  ++Y+E++FA+C+  MLSIQ++P PV+A V+G+AT AGCQLVA CDLAVAS+ A F  SGV +GLFCATP V LSRN+ RK AFEMLVTG++I+A++A   GLVN+V   E LD EV  L+  IV  PAVAIAMGK LFY Q+E   I  AYD A   M+ NM +    EG+ AF+EKRPP+W
Sbjct:   14 GVVTLTLNRPRTFNALSEAMLTALGEAIDGLATDDAVRAVVLAASGKAFCAGHDLKEMR-AEPSREYYEQLFAQCTAVMLSIQQLPVPVIARVHGIATAAGCQLVAMCDLAVASNDARFAVSGVNVGLFCATPGVALSRNVPRKAAFEMLVTGDFISAEQARSLGLVNRVVPAEALDDEVEALIASIVAKPAVAIAMGKALFYRQIE-VGIKAAYDDAATTMACNMMDPSALEGVEAFIEKRPPSW 257
[Close]
BLAST of NO08G01340 vs. NCBI_GenBank
Match: WP_088287406.1 (enoyl-CoA hydratase [Ideonella sp. A 288])

HSP 1 Score: 264.2 bits (674), Expect = 5.100e-67
Identity = 139/246 (56.50%), Postives = 172/246 (69.92%), Query Frame = 0 
Query:   71 GYLVVTLNRPRHSNAMSTAILHDLQAVFDKLPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFMLSIQRVPQPVVAAVNGLATGAGCQLVAACDLAVASSRAEFGTSGVKLGLFCATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAEVLRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGAYDMADYVMSANMTEADTEEGIAAFVEKRPPAW 317
            G + +TLNRP+  NA+S A+L  LQ   D++  D  VR +V+   G AFC GHDL +M  ++  + Y+ER+FA C R M+SIQ++P PV+A V+G+AT AGCQLVA CDLAVA+  A F  SGV LGLFCATPSV LSRNL RK AFEMLVTG +I+AD+AL  GL+N+V D  +LDA V  LV  IV  PAVA+AMGK LFY QLEK  I  AY  A   M+ NM +    EG+ AF+EKRPP W
Sbjct:   17 GVVTLTLNRPQAFNALSEAMLAALQTELDQIADDPSVRVLVIGAAGRAFCAGHDLREMR-AEPSQAYYERLFADCGRMMMSIQKLPVPVIAKVHGIATAAGCQLVAMCDLAVAARDARFAVSGVNLGLFCATPSVALSRNLGRKAAFEMLVTGAFISADEALAKGLINRVADPAELDAAVEALVASIVGKPAVALAMGKALFYRQLEK-GIEAAYADAGDTMACNMMDDSALEGVQAFIEKRPPNW 260
[Close]
BLAST of NO08G01340 vs. NCBI_GenBank
Match: WP_066784223.1 (enoyl-CoA hydratase [Chloroflexus islandicus] >OAN47284.1 enoyl-CoA hydratase [Chloroflexus islandicus])

HSP 1 Score: 263.8 bits (673), Expect = 6.700e-67
Identity = 138/246 (56.10%), Postives = 174/246 (70.73%), Query Frame = 0 
Query:   71 GYLVVTLNRPRHSNAMSTAILHDLQAVFDKLPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFMLSIQRVPQPVVAAVNGLATGAGCQLVAACDLAVASSRAEFGTSGVKLGLFCATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAEVLRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGAYDMADYVMSANMTEADTEEGIAAFVEKRPPAW 317
            G   +TLNRPR  NA+S  +L  LQA  D +  +   R VVL   G AFC GHDL QM  +  D++Y+E +FA+CS+ ML+IQR+PQPV+A V+G+AT AGCQLVA CDLAVAS+ A+F  SG+ +GLFC+TPSV LSRN+ RK AFEMLVTGE+I+A  A   GLVN+V    +LDAEV RLV  I+  PA +IA+GK LFY Q+E   +  AY +A   M+ NM E   +EG+AAFVEKR PAW
Sbjct:   20 GIARLTLNRPRQFNALSDEMLAALQAELDAIAANPQARVVVLAAAGKAFCAGHDLKQM-QAHPDQQYYEDLFARCSQMMLTIQRMPQPVIARVHGIATAAGCQLVAMCDLAVASTEAKFAVSGINVGLFCSTPSVALSRNIGRKAAFEMLVTGEFIDAPTAQRLGLVNRVAPPAELDAEVQRLVDAILSKPAESIAIGKSLFYRQIE-LPMEEAYQLAGQTMACNMMEPCAQEGVAAFVEKRAPAW 263
The following BLAST results are available for this feature:
BLAST of NO08G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_054152361.11.900e-6957.32enoyl-CoA hydratase [beta proteobacterium AAP51] >... [more]
WP_031460084.11.200e-6856.85enoyl-CoA hydratase [Chloroflexus sp. MS-G][more]
WP_015940776.12.100e-6856.50enoyl-CoA hydratase [Chloroflexus aggregans] >ACL2... [more]
WP_028458311.13.500e-6856.45enoyl-CoA hydratase [Chloroflexus sp. Y-396-1][more]
WP_087079149.11.000e-6756.91enoyl-CoA hydratase [Mycobacterium dioxanotrophicu... [more]
WP_054137944.13.000e-6755.28MULTISPECIES: enoyl-CoA hydratase [unclassified Be... [more]
WP_047907307.13.900e-6754.41enoyl-CoA hydratase [Pandoraea faecigallinarum] >A... [more]
WP_083164704.13.900e-6756.50enoyl-CoA hydratase [Mycobacterium aquaticum] >ORA... [more]
WP_088287406.15.100e-6756.50enoyl-CoA hydratase [Ideonella sp. A 288][more]
WP_066784223.16.700e-6756.10enoyl-CoA hydratase [Chloroflexus islandicus] >OAN... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008919NSK008919Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01340.7NO08G01340.7-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO08G01340.6NO08G01340.6-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO08G01340.5NO08G01340.5-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO08G01340.4NO08G01340.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO08G01340.3NO08G01340.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO08G01340.2NO08G01340.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO08G01340.1NO08G01340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01340.7NO08G01340.7Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO08G01340.6NO08G01340.6Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO08G01340.5NO08G01340.5Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO08G01340.4NO08G01340.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO08G01340.3NO08G01340.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO08G01340.2NO08G01340.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO08G01340.1NO08G01340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100001g38gene3920Nannochloropsis gaditana (N. gaditana B-31)gene
jgi.p|Nanoce1779_2|582198gene_3461Nannochloropsis oceanica (N. oceanica CCMP1779)gene


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01340 ID=NO08G01340|Name=NO08G01340|organism=Nannochloropsis oceanica|type=gene|length=2481bp
CTTTGCCTGATGAAAAACCTGTCAAAGTCGCTAGTAATACTCGGACAAAA
ATAAGGGGCGAATAGGCAACAATTTTTTGTTGGAAGGCTCGCCCTCGTGT
GCAAGTCCTAGAGGAGGTCAGGTTGCATGCGATAGTTCTAGAGGGATGTA
GGAACAGCAGAAAAAAAGAACCAAACGAGGCAAAGTTGTGATTGATTGAT
GTGATTGTGATTGTGATTTTGTGATTTTGTGATGTGATCACCTCTGTGAT
GTGACGTGATGTGATGTGATGTGATGTGCTCTCATCATTAAATGCGCAAG
ATGGTCAGAATGAGTGCTCACAAACCATTTCCTCACGCCTAGACACTTGC
GCCCGACCCACCAGCCACTACATACATCATCTACATCATAGTAACAACAA
GGACAATAGTTCCCTCTTGCAACCAAGGAGCCACTCCCTGATCGTCTACG
CATCTTCAACATATCAGTATATCAGTATCAGTgtaagtggagagctaacg
tctctgacccctatccccccccttgaagcatcgagacatgttatgtctat
cccacgcacgtgcacccccaagaattcgtaatggggtatcgcgttatatg
ctgcgtcggttatatgccaatcaccgcgcctcccgtccccctgacacccc
ctaccctccccttgactcccccggacaccttgatgcccctctcctagtcc
tcctgtcctctgtccttcctgcctcccactcgcgcatctccaacagcccg
atgccaggcatgattttctatcctgcgtcgggtatagagagattgcaaca
gaaactctctacatgactgcttctgaccgccgcaaatgctttgcgccact
ataagctgacgggggattgatgcagtcacacattcccattcttacaacga
ggcaggcacgacttactttgcctctatcatcttttttctgttcttgactg
tcattatctgcctcatttatgatcacgatgtacaacaccatataggtatt
aatactcccttctttttttcaacttcaatccagtcctcatcctcgctcct
ctccacccctccatctctccaaagTAGAGCTTTGTACAATTACAAATTAG
CACCATGCTACTCATGCCCCGCATCTTTCGGACTGCAGCCAGCAGTACAA
TTAGCGTGATTCACCGCCCAACTACGCCTCTCCTTCCCCTCCTCCCGCGC
TTTTCTCTCTCACTCTCCTCCTCCGCCGCCTCCTCGCCTTCCCACGACCC
AAACAAAGAACCGGATGCCCCACCCGTCCTCGTCGAGCGTAGATCGGTCG
CTGGTACCCACGGCGGTTACCTTGTCGTGACTCTCAATCGTCCCCGGCAC
TCCAACGCCATGAGCACAGCGATCCTTCACGACCTCCAAGCTGTTTTCGA
CAAACTCCCGACCGATAAGTGGGTCCGAGCTGTAGTCCTAACGGGGACAG
GACACGCCTTCTGCGGGGGGCATGACCTGTACCAAATGCACGACTCCCAG
GGCGACAAGAAGTACTTCGAGCGGATGTTCGCCAAGTGCTCGCGGTTCAT
GCTGTCGATCCAGAGGGTACCCCAGCCCGTGGTGGCGGCCGTTAACGGGC
TAGCCACAGGCGCTGGTAAGTCTCGGCGTGTGTCTTCGTTTCATTTGTTT
AGTAAAATATTGCAGGTATTTGACTGTCACCTACCATATAATCACTTCGT
ATCTCACCTCTTGAAACGTCTGTCCTTTTCTCACTCCCTCCCAACCATGC
CTCCCTCCCCTCCACCAGGCTGCCAGCTTGTCGCAGCGTGTGATCTAGCC
GTGGCCTCCTCGCGGGCAGAATTTGGAACTTCCGGGGTTAAGCTCGGTTT
GTTCTGCGCCACCCCCAGTGTGCCTCTGAGTCGAAACTTGTCGCGGAAAC
GGGCGTTTGAAATGCTCGTTACGGGAGAGTACATCAATGCGGACAAGGCG
CTGGATTGGGGTTTGGTGAACAAAGTGTGTGACCATGAGAAATTGGATGC
CGAGGTCTTGAGGCTCGTGACGGAGATTGTCAAGAACCCGGCGGTGGCGA
TTGCAATGGGCAAGCGTCTCTTTTATTCCCAGCTGGAAAAATCGTCGATT
GCGGGGGCATgtaagcacttgcttgaagggaggcagagggtggctgagag
gacgggaagagggatagaagacaggaagatgctgccaagcttgtctgtgc
tctcatttttatatgttcattttccttttgctcctcttccttccacccga
cacttaattcccagACGACATGGCCGATTATGTAATGAGCGCGAACATGA
CCGAGGCTGACACAGAGGAGGGCATCGCAGCCTTTGTCGAGAAGCGACCG
CCGGCGTGGGATTTGTAGAAGTTGAGAAGCGTGGTAAAATGACGGCTATG
TTTTGTGGTAGATCATCGATCGTGTGTGTGCCTGTATACAGGATGTACAA
GGGGGAGGAGGTTATAGTTTGTAGGGGGGGG
back to top

protein sequence of NO08G01340.7

>NO08G01340.7-protein ID=NO08G01340.7-protein|Name=NO08G01340.7|organism=Nannochloropsis oceanica|type=polypeptide|length=402bp
MLLMPRIFRTAASSTISVIHRPTTPLLPLLPRFSLSLSSSAASSPSHDPN
KEPDAPPVLVERRSVAGTHGGYLVVTLNRPRHSNAMSTAILHDLQAVFDK
LPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFML
SIQRVPQPVVAAVNGLATGAGKSRRVSSFHLFSKILQVFDCHLPYNHFVS
HLLKRLSFSHSLPTMPPSPPPGCQLVAACDLAVASSRAEFGTSGVKLGLF
CATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAE
VLRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGACKHLLEGRQRVAERT
GRGIEDRKMLPSLSVLSFLYVHFPFAPLPSTRHLIPRRHGRLCNEREHDR
G*
back to top

protein sequence of NO08G01340.6

>NO08G01340.6-protein ID=NO08G01340.6-protein|Name=NO08G01340.6|organism=Nannochloropsis oceanica|type=polypeptide|length=351bp
MLLMPRIFRTAASSTISVIHRPTTPLLPLLPRFSLSLSSSAASSPSHDPN
KEPDAPPVLVERRSVAGTHGGYLVVTLNRPRHSNAMSTAILHDLQAVFDK
LPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFML
SIQRVPQPVVAAVNGLATGAGCQLVAACDLAVASSRAEFGTSGVKLGLFC
ATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAEV
LRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGACKHLLEGRQRVAERTG
RGIEDRKMLPSLSVLSFLYVHFPFAPLPSTRHLIPRRHGRLCNEREHDRG
*
back to top

protein sequence of NO08G01340.5

>NO08G01340.5-protein ID=NO08G01340.5-protein|Name=NO08G01340.5|organism=Nannochloropsis oceanica|type=polypeptide|length=370bp
MLLMPRIFRTAASSTISVIHRPTTPLLPLLPRFSLSLSSSAASSPSHDPN
KEPDAPPVLVERRSVAGTHGGYLVVTLNRPRHSNAMSTAILHDLQAVFDK
LPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFML
SIQRVPQPVVAAVNGLATGAGKSRRVSSFHLFSKILQVFDCHLPYNHFVS
HLLKRLSFSHSLPTMPPSPPPGCQLVAACDLAVASSRAEFGTSGVKLGLF
CATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAE
VLRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGAYDMADYVMSANMTEA
DTEEGIAAFVEKRPPAWDL*
back to top

protein sequence of NO08G01340.4

>NO08G01340.4-protein ID=NO08G01340.4-protein|Name=NO08G01340.4|organism=Nannochloropsis oceanica|type=polypeptide|length=351bp
MLLMPRIFRTAASSTISVIHRPTTPLLPLLPRFSLSLSSSAASSPSHDPN
KEPDAPPVLVERRSVAGTHGGYLVVTLNRPRHSNAMSTAILHDLQAVFDK
LPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFML
SIQRVPQPVVAAVNGLATGAGCQLVAACDLAVASSRAEFGTSGVKLGLFC
ATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAEV
LRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGACKHLLEGRQRVAERTG
RGIEDRKMLPSLSVLSFLYVHFPFAPLPSTRHLIPRRHGRLCNEREHDRG
*
back to top

protein sequence of NO08G01340.3

>NO08G01340.3-protein ID=NO08G01340.3-protein|Name=NO08G01340.3|organism=Nannochloropsis oceanica|type=polypeptide|length=370bp
MLLMPRIFRTAASSTISVIHRPTTPLLPLLPRFSLSLSSSAASSPSHDPN
KEPDAPPVLVERRSVAGTHGGYLVVTLNRPRHSNAMSTAILHDLQAVFDK
LPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFML
SIQRVPQPVVAAVNGLATGAGKSRRVSSFHLFSKILQVFDCHLPYNHFVS
HLLKRLSFSHSLPTMPPSPPPGCQLVAACDLAVASSRAEFGTSGVKLGLF
CATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAE
VLRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGAYDMADYVMSANMTEA
DTEEGIAAFVEKRPPAWDL*
back to top

protein sequence of NO08G01340.2

>NO08G01340.2-protein ID=NO08G01340.2-protein|Name=NO08G01340.2|organism=Nannochloropsis oceanica|type=polypeptide|length=319bp
MLLMPRIFRTAASSTISVIHRPTTPLLPLLPRFSLSLSSSAASSPSHDPN
KEPDAPPVLVERRSVAGTHGGYLVVTLNRPRHSNAMSTAILHDLQAVFDK
LPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFML
SIQRVPQPVVAAVNGLATGAGCQLVAACDLAVASSRAEFGTSGVKLGLFC
ATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAEV
LRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGAYDMADYVMSANMTEAD
TEEGIAAFVEKRPPAWDL*
back to top

protein sequence of NO08G01340.1

>NO08G01340.1-protein ID=NO08G01340.1-protein|Name=NO08G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=319bp
MLLMPRIFRTAASSTISVIHRPTTPLLPLLPRFSLSLSSSAASSPSHDPN
KEPDAPPVLVERRSVAGTHGGYLVVTLNRPRHSNAMSTAILHDLQAVFDK
LPTDKWVRAVVLTGTGHAFCGGHDLYQMHDSQGDKKYFERMFAKCSRFML
SIQRVPQPVVAAVNGLATGAGCQLVAACDLAVASSRAEFGTSGVKLGLFC
ATPSVPLSRNLSRKRAFEMLVTGEYINADKALDWGLVNKVCDHEKLDAEV
LRLVTEIVKNPAVAIAMGKRLFYSQLEKSSIAGAYDMADYVMSANMTEAD
TEEGIAAFVEKRPPAWDL*
back to top
Synonyms
Publications