NO08G01200, NO08G01200 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01200 vs. NCBI_GenBank
Match: XP_005852732.1 (receptor-interacting serine-threonine kinase 4, partial [Nannochloropsis gaditana CCMP526] >XP_005856381.1 receptor-interacting serine-threonine kinase 4, partial [Nannochloropsis gaditana CCMP526] >EKU19968.1 receptor-interacting serine-threonine kinase 4, partial [Nannochloropsis gaditana CCMP526] >EKU23099.1 receptor-interacting serine-threonine kinase 4, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 258.8 bits (660), Expect = 2.600e-65 Identity = 125/189 (66.14%), Postives = 151/189 (79.89%), Query Frame = 0 Query: 56 MLNALNDALAEGKVHTVTCLLQAHPLLVSTRMHAGGWTPLLLASYYDQPKVVEIILGHAGVGVNDVDNDIFRRSALHWLAARGQAVLIFKLVKQHGASVDLRDAENNTPLHRACKANQPMTVMMLLMLGADPEARTEDEEVPAEVTDSSLARAFIRLFQKSCLKSTPVHKGRIGGEMHMAPVSSTSSTS 245 ML ALNDA+ G VH V+CLL+AHPLLVSTRMH GGWTPLLLASYYDQP+VVE+IL AGVGV+DVD DIFRR++LHWLAA GQ +LI K+VKQHGASVD+RDAE NTPLHRACKANQ +TV MLLMLGADP ARTE+ ++P++VT+S + R+ +RL+Q SCL+ + +GR + ST S Sbjct: 25 MLKALNDAVTAGSVHKVSCLLRAHPLLVSTRMHEGGWTPLLLASYYDQPEVVELILNRAGVGVDDVDQDIFRRTSLHWLAAHGQPLLILKMVKQHGASVDIRDAEQNTPLHRACKANQALTVAMLLMLGADPLARTEEGDLPSDVTESGMTRSCMRLWQTSCLRLSSFKQGRTQKACNDYTTKSTQDAS 213
BLAST of NO08G01200 vs. NCBI_GenBank
Match: EWM26710.1 (ankyrin domain protein [Nannochloropsis gaditana]) HSP 1 Score: 257.7 bits (657), Expect = 5.700e-65 Identity = 121/172 (70.35%), Postives = 146/172 (84.88%), Query Frame = 0 Query: 56 MLNALNDALAEGKVHTVTCLLQAHPLLVSTRMHAGGWTPLLLASYYDQPKVVEIILGHAGVGVNDVDNDIFRRSALHWLAARGQAVLIFKLVKQHGASVDLRDAENNTPLHRACKANQPMTVMMLLMLGADPEARTEDEEVPAEVTDSSLARAFIRLFQKSCLKSTPVHKGR 228 ML ALNDA+ G VH V+CLL+AHPLLVSTRMH GGWTPLLLASYYDQP+VVE+IL AGVGV+DVD DIFRR++LHWLAA G +LI K+VKQHGASVD+RDAE NTPLHRACKANQ +TV MLLMLGADP ARTE+ ++P++VT+S + R+ +RL+Q SCL+ + +GR Sbjct: 1 MLKALNDAVTAGSVHKVSCLLRAHPLLVSTRMHEGGWTPLLLASYYDQPEVVELILNRAGVGVDDVDQDIFRRTSLHWLAAHGHPLLILKMVKQHGASVDIRDAEQNTPLHRACKANQALTVAMLLMLGADPLARTEEGDLPSDVTESGMTRSCMRLWQTSCLRLSSFKQGR 172
BLAST of NO08G01200 vs. NCBI_GenBank
Match: AMW06202.1 (hypothetical protein GEMMAAP_18250 [Gemmatimonas phototrophica]) HSP 1 Score: 67.4 bits (163), Expect = 1.100e-7 Identity = 43/130 (33.08%), Postives = 64/130 (49.23%), Query Frame = 0 Query: 86 RMHAGGWTPLLLASYYDQPKVVEIILGHAGVGVNDVDNDIFRRSALHWLAARGQAVLIFKLVKQHGASVDLRDAENNTPLHRACKANQPMTVMMLLMLGADPEARTEDEEVPAEVTDSSLARAFIRLFQK 216 R + GW+PL LA+++ Q V +++ H G ++ + R + LH A I K + GA+V R A+N TPLH A +L+ GADP A ED PA++ + AR F L +K Sbjct: 91 RRSSDGWSPLHLAAFFGQDDAVALLIDH-GAPLDAHSTNATRNTPLHAALAGATKPSIVKRLIFAGANVASRGAQNITPLHLAASRGDGTLCELLVARGADPHAVMEDGTTPAQL---ATARGFADLGEK 216
BLAST of NO08G01200 vs. NCBI_GenBank
Match: WP_082821597.1 (ankyrin repeat domain-containing protein [Gemmatimonas phototrophica]) HSP 1 Score: 67.4 bits (163), Expect = 1.100e-7 Identity = 43/130 (33.08%), Postives = 64/130 (49.23%), Query Frame = 0 Query: 86 RMHAGGWTPLLLASYYDQPKVVEIILGHAGVGVNDVDNDIFRRSALHWLAARGQAVLIFKLVKQHGASVDLRDAENNTPLHRACKANQPMTVMMLLMLGADPEARTEDEEVPAEVTDSSLARAFIRLFQK 216 R + GW+PL LA+++ Q V +++ H G ++ + R + LH A I K + GA+V R A+N TPLH A +L+ GADP A ED PA++ + AR F L +K Sbjct: 164 RRSSDGWSPLHLAAFFGQDDAVALLIDH-GAPLDAHSTNATRNTPLHAALAGATKPSIVKRLIFAGANVASRGAQNITPLHLAASRGDGTLCELLVARGADPHAVMEDGTTPAQL---ATARGFADLGEK 289
BLAST of NO08G01200 vs. NCBI_GenBank
Match: POM72301.1 (LOW QUALITY PROTEIN: Serine/threonine protein kinase, partial [Phytophthora palmivora var. palmivora]) HSP 1 Score: 65.1 bits (157), Expect = 5.500e-7 Identity = 43/109 (39.45%), Postives = 58/109 (53.21%), Query Frame = 0 Query: 91 GWTPLLLASYYDQPKVVEIILGHAGVGVNDVD-NDIFRRSALHWLAARGQAVLIFKLVKQHGA-SVDLRDAENNTPLHRACKANQPMTVMMLLMLGADPEARTEDEEVP 198 GWTPL+LAS+Y VV +L H DVD D +AL + AA G+ + I KL+ QHG+ SV+ + TPL A + + M LL +GA P A+T P Sbjct: 169 GWTPLILASWYGHISVVRYLLNHGA----DVDAKDAGGSTALRFAAAEGR-LKIAKLLVQHGSLSVNEPEMHGRTPLWFAVQNDHLQIAMWLLRIGAQPNAKTSAGSTP 272
BLAST of NO08G01200 vs. NCBI_GenBank
Match: OAQ27703.1 (hypothetical protein K457DRAFT_21040 [Mortierella elongata AG-77]) HSP 1 Score: 64.3 bits (155), Expect = 9.300e-7 Identity = 42/115 (36.52%), Postives = 59/115 (51.30%), Query Frame = 0 Query: 91 GWTPLLLASYYDQPKVVEIILGHAGVGVNDVDNDIFRRSALHWLAARGQAVLIFKLVKQHGASVDLRDA-ENNTPLHRACKANQPMTVMMLLMLGADPEARTEDEEVPAEVTDSS 205 GWTPLL + +D VV+ +L V V VD+ + S LH RG ++ L Q +DL+ + +TPL AC++N V LL GA+PE R E PA++T S Sbjct: 744 GWTPLLKWALHDYAAVVKCLLETGRVNVLMVDSRGY--SPLHMACLRGNLEMVQML--QAYTPIDLQSVIDGSTPLQLACQSNSASVVEFLLQSGANPELREWSNEAPADMTTDS 854
BLAST of NO08G01200 vs. NCBI_GenBank
Match: GBG31624.1 (Ankyrin repeat domain-containing protein 1 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 64.3 bits (155), Expect = 9.300e-7 Identity = 35/102 (34.31%), Postives = 51/102 (50.00%), Query Frame = 0 Query: 113 HAGVGVNDVDNDIFRRSALHWLAARGQAVLIFKLVKQHGASVDLRDAENNTPLHRACKANQPMTVMMLLMLGADPEARTEDEEVPAEVTDS-SLARAFIRLF 214 H GV N D + LHW A+ GQ + + + GA ++ + + TP+H AC+ T LL LGA P+AR D +P E+ + +L AF LF Sbjct: 144 HGGVNANADDGTAAHATILHWAASFGQPRELLQELVNAGAVLEACNDKKRTPMHEACEGGHVETASALLELGASPDARDVDGHLPVELAKTQALRSAFAALF 245 The following BLAST results are available for this feature:
BLAST of NO08G01200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01200 ID=NO08G01200|Name=NO08G01200|organism=Nannochloropsis oceanica|type=gene|length=1594bpback to top protein sequence of NO08G01200.1 >NO08G01200.1-protein ID=NO08G01200.1-protein|Name=NO08G01200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=382bpback to top Synonyms
Publications
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