NO08G01170, NO08G01170 (gene) Nannochloropsis oceanica

Overview
NameNO08G01170
Unique NameNO08G01170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2036
Alignment locationchr8:364970..367005 -

Link to JBrowse

Properties
Property NameValue
DescriptionNitrogen permease regulator 2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:364970..367005 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009348NPR2
Homology
BLAST of NO08G01170 vs. NCBI_GenBank
Match: EWM26767.1 (Nitrogen permease regulator 2 [Nannochloropsis gaditana])

HSP 1 Score: 549.7 bits (1415), Expect = 1.000e-152
Identity = 297/518 (57.34%), Postives = 350/518 (67.57%), Query Frame = 0
Query:   14 AQASGQAATLLAIIYSEFDNTLGPTIRCQVPEGFLSQGFFDSISDYVITGRQLYGRTVAVTACDLQVVGFPLCIENEKYSRNTFLFNVSFVLRADADPTPYEPILRKLALTLHTLEVESEFIFRPEKKAHLHDMLHKILTDLNAREECLLALDDANVLSLKLTRVVQEPPLVGDHDVPVFLRDAAVLKSLDWDLALRQIISHIDGVKYTKRLAMDAEMDVDCAKAALRTLAYYDFIALVDIFQFSNIYITSTTEAAAFRAFAKSPALLMECQGFVCNHAAAVTA------TLSSIGAATPDTSDGGVVGEEGRNGEPGXXXXXXXXXXXEAEGSTACRLLPSGEDLLQLYGACRPNLTLAEVLQTHKEKMSRIDARRFVTFGVVYGFLRRVHRYPVYIRKWNKGTEELSSSKSSISAGLITMPPNRPSSLPRARGAXXXXXXXXXXXXXXXXXXXXXXXXXXFSRPGFHPHSLVDQVKVLLDGTRTMDEVCVAFMRPFQELEEIVLSAGDGEVLIVYK 526
            A+    A  LLAIIYS+FDNT+GPTIRCQ P+GFLSQ  FDSISDYVITGRQLYG+T+AVT  DLQ+VGFPLCIENEKY RNTFLFNVSFVL A +DP PYEPILRK+ALTL++LE + EFI RPE +  LH MLH+IL DLNAR+ECLL LDDAN+LSLKL  VVQEPP+VGDH VPVFLRDAAVLK+LDWDLALR II HIDG+KY KRLAMDAEMDVDC KAALRTL +YDFIALVDIF+FSN+Y+ S TEAAAFR F  SPA+L EC+ FVC   A  ++      T +S  A T   +D   +  +    +               E   A  LL S EDL+ LY A  P+LTLA+++   K+KM  +DARR VTFGVVYGFLRRVHRYPVY+      ++E +     I  G  T          +  G                                 +P SLV QV+ + DGTRT+DE CV FMRPFQEL++I LS+  GEV+I+YK
Sbjct:    9 AEKEDAAGPLLAIIYSDFDNTIGPTIRCQTPDGFLSQEVFDSISDYVITGRQLYGKTIAVTVSDLQIVGFPLCIENEKYPRNTFLFNVSFVLDARSDPAPYEPILRKVALTLYSLEEDREFISRPETRWQLHRMLHRILEDLNARKECLLILDDANLLSLKLVHVVQEPPVVGDHQVPVFLRDAAVLKNLDWDLALRHIIPHIDGIKYAKRLAMDAEMDVDCVKAALRTLVHYDFIALVDIFKFSNVYVISGTEAAAFREFMDSPAMLEECRKFVCYPPACTSSQALPPHTPTSTPATTGHCTDSPTIASQSVMEDRMGAGERMTGGARPGEEDEASPLLTSDEDLINLYRAFGPHLTLADIISARKQKMRAVDARRLVTFGVVYGFLRRVHRYPVYL----PASKESNQPPGPIRNGQRTQDGTLGRGGGKKYGTKLTSQRSSISKEDAGKTVNNKSNEHKQRSTQKYPLSLVKQVQSVFDGTRTLDEACVKFMRPFQELKDIALSSEGGEVVILYK 522          
BLAST of NO08G01170 vs. NCBI_GenBank
Match: XP_009834746.1 (hypothetical protein H257_10021 [Aphanomyces astaci] >ETV75615.1 hypothetical protein H257_10021 [Aphanomyces astaci])

HSP 1 Score: 270.8 bits (691), Expect = 9.000e-69
Identity = 173/493 (35.09%), Postives = 249/493 (50.51%), Query Frame = 0
Query:   25 AIIYSEFDNTLGPTIRCQVPEGFLSQGFFDSISDYVITGRQLYGRTVAVTACDLQVVGFPLCIENEKYSRNTFLFNVSFVLRADADPTPYEPILRKLALTLHTLEVESEFIFRPEKKAHLHDMLHKILTDLNAREECLLALDDANVLSLKLTRVVQEPPLVGDHDVPVFLRDAAVL--KSLDWDLALRQIISHIDGVKYTKRLAMDAEMDVDCAKAALRTLAYYDFIALVDIFQFSNIYITSTTEAAAFRAFAKSPALLMECQGFVCNHAAAVTATLSSIGAATPDTSDGGVVGEEGRNGEPGXXXXXXXXXXXEAEGSTACRLLPSGEDLLQLYGACRPNLTLAEVLQTHKEKMSRIDARRFVTFGVVYGFLRRVHRYPVYI-RKWNKGTEELSSSKSSISAGLITMPPNRPSSLPRARGAXXXXXXXXXXXXXXXXXXXXXXXXXXFSRPGFHPHSLVDQ--VKVLLDGTRTMDEVCVAFMRPFQELEEIV 513
            AI YSEFDN  GP I  Q P   LS   FDS+S Y+I  + L G+ + V    +++VG+P+CIE++KY RN  LFN+ FV   DAD  PY+PILRKL   + ++E E  F+ +   KA L  +L  IL DL    E    +D AN+++LK+ + +  PP V DH VPV +RD   L   S++WDLAL++I+ HIDGV Y KR+A+ AE+D+   K+ LR L YY  I ++DIF  SN Y T+        +F   P L  EC  ++ +HA                            NG P                       PS   +  LY A +PN  +A V  +H+E +  +D RR +TFG+V+GFLRR+HRYPV I R  ++  + LSSS S+++   +    N  +++   R A                            R      +LVD+  VK ++DG    DE+C   M  + +LE+++
Sbjct:    5 AIFYSEFDNIAGPQIVYQAPPNALSNEVFDSVSGYIIIDKALCGKIITVCPQGIKIVGYPVCIEDDKYHRNALLFNIGFVFDKDADAAPYKPILRKLGALMESMEKEMGFLSKEASKATLSTILPSILHDLTMYGESTTTIDTANIINLKVFQKLPPPPNVLDHQVPVAIRDLHDLLKHSVEWDLALQKIVPHIDGVNYVKRIAIAAEVDIAIVKSCLRQLLYYRCITMIDIFMHSNNYATT----PKLHSFFNDPLLQQECIEYI-SHA----------------------------NGPPP----------------------PSFATVFSLYCALQPNTPVAHVWTSHQELLVHVDVRRLITFGLVHGFLRRIHRYPVIIDRLSSRPAQMLSSSPSTMN---LQAANNGNNAVMNIRKAATPHHGTYDDNPRPMFPYMPSGGGSNAVRT-----ALVDREVVKKMMDGQHHTDEICCTHMIRYSDLEKVL 434          
BLAST of NO08G01170 vs. NCBI_GenBank
Match: XP_009834750.1 (hypothetical protein, variant 1 [Aphanomyces astaci] >ETV75616.1 hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 269.6 bits (688), Expect = 2.000e-68
Identity = 171/493 (34.69%), Postives = 246/493 (49.90%), Query Frame = 0
Query:   25 AIIYSEFDNTLGPTIRCQVPEGFLSQGFFDSISDYVITGRQLYGRTVAVTACDLQVVGFPLCIENEKYSRNTFLFNVSFVLRADADPTPYEPILRKLALTLHTLEVESEFIFRPEKKAHLHDMLHKILTDLNAREECLLALDDANVLSLKLTRVVQEPPLVGDHDVPVFLRDAAVL--KSLDWDLALRQIISHIDGVKYTKRLAMDAEMDVDCAKAALRTLAYYDFIALVDIFQFSNIYITSTTEAAAFRAFAKSPALLMECQGFVCNHAAAVTATLSSIGAATPDTSDGGVVGEEGRNGEPGXXXXXXXXXXXEAEGSTACRLLPSGEDLLQLYGACRPNLTLAEVLQTHKEKMSRIDARRFVTFGVVYGFLRRVHRYPVYI-RKWNKGTEELSSSKSSISAGLITMPPNRPSSLPRARGAXXXXXXXXXXXXXXXXXXXXXXXXXXFSRPGFHPHSLVDQ--VKVLLDGTRTMDEVCVAFMRPFQELEEIV 513
            AI YSEFDN  GP I  Q P   LS   FDS+S Y+I  + L G+ + V    +++VG+P+CIE++KY RN  LFN+ FV   DAD  PY+PILRKL   + ++E E  F+ +   KA L  +L  IL DL    E    +D AN+++LK+ + +  PP V DH VPV +RD   L   S++WDLAL++I+ HIDGV Y KR+A+ AE+D+   K+ LR L YY  I ++DIF  SN Y T+        +F   P L  EC  ++ +HA                            NG P                       PS   +  LY A +PN  +A V  +H+E +  +D RR +TFG+V+GFLRR+HRYPV I R  ++  + LSSS S+++        N   ++ +A                                      +LVD+  VK ++DG    DE+C   M  + +LE+++
Sbjct:    5 AIFYSEFDNIAGPQIVYQAPPNALSNEVFDSVSGYIIIDKALCGKIITVCPQGIKIVGYPVCIEDDKYHRNALLFNIGFVFDKDADAAPYKPILRKLGALMESMEKEMGFLSKEASKATLSTILPSILHDLTMYGESTTTIDTANIINLKVFQKLPPPPNVLDHQVPVAIRDLHDLLKHSVEWDLALQKIVPHIDGVNYVKRIAIAAEVDIAIVKSCLRQLLYYRCITMIDIFMHSNNYATT----PKLHSFFNDPLLQQECIEYI-SHA----------------------------NGPPP----------------------PSFATVFSLYCALQPNTPVAHVWTSHQELLVHVDVRRLITFGLVHGFLRRIHRYPVIIDRLSSRPAQMLSSSPSTMNLQAANNGNNAVMNIRKAATPHHGGGSNAVRT------------------------ALVDREVVKKMMDGQHHTDEICCTHMIRYSDLEKVL 418          
BLAST of NO08G01170 vs. NCBI_GenBank
Match: XP_008864801.1 (hypothetical protein, variant 1 [Aphanomyces invadans] >ETW06726.1 hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 264.6 bits (675), Expect = 6.500e-67
Identity = 166/492 (33.74%), Postives = 245/492 (49.80%), Query Frame = 0
Query:   26 IIYSEFDNTLGPTIRCQVPEGFLSQGFFDSISDYVITGRQLYGRTVAVTACDLQVVGFPLCIENEKYSRNTFLFNVSFVLRADADPTPYEPILRKLALTLHTLEVESEFIFRPEKKAHLHDMLHKILTDLNAREECLLALDDANVLSLKLTRVVQEPPLVGDHDVPVFLRDAAVL--KSLDWDLALRQIISHIDGVKYTKRLAMDAEMDVDCAKAALRTLAYYDFIALVDIFQFSNIYITSTTEAAAFRAFAKSPALLMECQGFVCNHAAAVTATLSSIGAATPDTSDGGVVGEEGRNGEPGXXXXXXXXXXXEAEGSTACRLLPSGEDLLQLYGACRPNLTLAEVLQTHKEKMSRIDARRFVTFGVVYGFLRRVHRYPVYI-RKWNKGTEELSSSKSSISAGLITMPPNRPSSLPRARGAXXXXXXXXXXXXXXXXXXXXXXXXXXFSRPGFHPHSLVDQ--VKVLLDGTRTMDEVCVAFMRPFQELEEIV 513
            + YSEFDN  GP I  Q P+  LS   FDS+S Y+I  + L G+ + V   D+++VG+P+CIE++KY RN  LFN+ FV   DAD  PY+PILRKL   + ++E E  F+ +   KA L  +L  IL DL    E    +D AN+++LK+ + +  PP V +H VPV +RD   L   S++WDLAL++I+ HIDGV Y KR+A+ AE+DV   K  +R L +Y  I ++DIF  SNIY T+    +A  +      L  EC  ++                              G   EP                       PS   +  LY A +PN  +A V ++H + ++ ID RR +TFG+++G LRR+HRYPV I R  ++  + LSSS S++S    T+  N  +++   R A                                    L+D+  VK ++DG    DE+C   M  + +LE ++
Sbjct:    5 VFYSEFDNIAGPQIVYQAPQNALSNEVFDSVSGYIIIDKALCGKIITVCPQDIKIVGYPVCIEDDKYHRNALLFNIGFVFDKDADAAPYKPILRKLGALMESMEKEMGFLSKESTKATLSTILPSILHDLTMYGESTTTIDPANIINLKVFQKLPPPPDVFEHQVPVAIRDLHDLLKNSVEWDLALQKIVPHIDGVNYVKRIAIAAEVDVAIVKNCMRQLLFYGCITMIDIFMHSNIYATT----SAVHSLVNDLVLQQECIAYI------------------------------GYANEPA----------------------PSFSAVFSLYCALQPNTPVAHVWKSHHKLLAHIDVRRLITFGLIHGILRRIHRYPVIIDRLSSRPPQMLSSSPSTVSLQSATL-TNGSNAVMAIRKAATPHHGNNGAR-----------------------SPLIDREAVKKMMDGEHHTDEICCVHMIRYSDLERLL 416          
BLAST of NO08G01170 vs. NCBI_GenBank
Match: OQR95534.1 (hypothetical protein THRCLA_07784 [Thraustotheca clavata])

HSP 1 Score: 263.8 bits (673), Expect = 1.100e-66
Identity = 168/506 (33.20%), Postives = 244/506 (48.22%), Query Frame = 0
Query:   25 AIIYSEFDNTLGPTIRCQVPEGFLSQGFFDSISDYVITGRQLYGRTVAVTACDLQVVGFPLCIENEKYSRNTFLFNVSFVLRADADPTPYEPILRKLALTLHTLEVESEFIFRPEKKAHLHDMLHKILTDLNAREECLLALDDANVLSLKLTRVVQEPPLVGDHDVPVFLRDAAVL--KSLDWDLALRQIISHIDGVKYTKRLAMDAEMDVDCAKAALRTLAYYDFIALVDIFQFSNIYITSTTEAAAFRAFAKSPALLMECQGFVCNHAAAVTATLSSIGAATPDTSDGGVVGEEGRNGEPGXXXXXXXXXXXEAEGSTACRLLPSGEDLLQLYGACRPNLTLAEVLQTH--------------KEKMSRIDARRFVTFGVVYGFLRRVHRYPVYIRKWNKGTEELSSSKSSISAGLITMPPNRPSSLPRARGAXXXXXXXXXXXXXXXXXXXXXXXXXXFSRPGFHPHSLVDQVKVLLDGTRTMDEVCVAFMRPFQELEEIVLS 515
            AI YSEFDN  GP I  Q P   LS   FDS+S Y+I  + L G+ + V   D+++VG+P+CIE++KY RN  LFN+ FV     D TPY+PILRKL   + T+E ES F+ +   K+ L  +L  IL DL    EC + +D AN+++LKL   +  PP V D++VPV +RD   L   S +WDLAL++I+  IDGV Y KR+A+ AE+D+   K  +R L YY  I ++DIF  +NIY  +TTE  +         L   C  +V               A   D                                       P+ + +   Y A +P +T++++  +               + +   +D RR VTFG+++GFLRR+HRYP+ I +  +    LSSS SS++   +T P   PS+L R + +                                      D+VK ++DG    DE+C AFM  F +LE I+ S
Sbjct:    4 AIFYSEFDNIAGPQIVYQAPPNALSNEVFDSVSGYIIIDKALCGKIITVCPQDIKIVGYPVCIEDDKYHRNALLFNIGFVFHRTMDSTPYKPILRKLGSLMETMEKESGFLSQESTKSKLATILPAILNDLTHFGECTIPIDTANIINLKLFPKLLAPPNVHDYEVPVAIRDLKTLLQNSAEWDLALQKIVPFIDGVNYVKRIAITAEVDLSIVKNCMRQLLYYGCITMIDIFLHTNIY--TTTEKISM--LMNDADLQRACVNYV---------------AKDEDNP-------------------------------------PTFQTVFNFYCAFQPGITVSQIWNSKTGQXXXXXXXXXXLQPQALLVDLRRLVTFGLIHGFLRRIHRYPIAIDRSQRAAPPLSSSPSSVNVAGLTAP--NPSALVRVKTSPPQGVRDK------------------------------DKVKKMMDGEHHTDEICCAFMLRFSDLENILQS 421          
BLAST of NO08G01170 vs. NCBI_GenBank
Match: OQR96411.1 (hypothetical protein ACHHYP_15825 [Achlya hypogyna])

HSP 1 Score: 263.5 bits (672), Expect = 1.400e-66
Identity = 164/497 (33.00%), Postives = 245/497 (49.30%), Query Frame = 0
Query:   25 AIIYSEFDNTLGPTIRCQVPEGFLSQGFFDSISDYVITGRQLYGRTVAVTACDLQVVGFPLCIENEKYSRNTFLFNVSFVLRADADPTPYEPILRKLALTLHTLEVESEFIFRPEKKAHLHDMLHKILTDLNAREECLLALDDANVLSLKLTRVVQEPPLVGDHDVPVFLRDAAVL--KSLDWDLALRQIISHIDGVKYTKRLAMDAEMDVDCAKAALRTLAYYDFIALVDIFQFSNIYITSTTEAAAFRAFAKSPALLMECQGFVCNHAAAVTATLSSIGAATPDTSDGGVVGEEGRNGEPGXXXXXXXXXXXEAEGSTACRLLPSGEDLLQLYGACRPNLTLAEVLQTHKEKMSRIDARRFVTFGVVYGFLRRVHRYPVYIRKWNKGTEELSSSKSS-----ISAGLITMPPNRPSSLPRARGAXXXXXXXXXXXXXXXXXXXXXXXXXXFSRPGFHPHSLVDQVKVLLDGTRTMDEVCVAFMRPFQELEEIVLS 515
            AI YSEFDN  GP I  Q P   LS   FDS+S Y+I  + L G+ + V   D+++VG+P+CIE++KY RN  LFN+ FV +   D TPY+PILRKL   + ++E E+ F+ R   KA L  +L  IL DL    EC + +D AN+++LKL   +  PP V D++VPV +RD   L   S +WDLAL++I+ +IDGV Y KR+A+ AE+D+   K  +R L YY  I ++DIF  SNIY  +TTE  +        AL   C  +V     A                                                     P    +  +Y A +P++ ++++  T+++ + +ID RR VTFG+++GFLRR+HRYP+ I +  +    LSSS S+     +SA  +T    R  + P ++G                                       D++K +++G    DE+C   +  + ELE I+ S
Sbjct:    4 AIFYSEFDNIAGPQIVYQAPLNALSNEVFDSVSGYIIIDKALCGKIITVCPQDIKIVGYPVCIEDDKYHRNALLFNIGFVFQRSMDSTPYKPILRKLGSLMESMEKENGFLSRESSKATLATILPAILHDLTHFGECTIPIDTANIINLKLFPKLSTPPNVQDYEVPVAIRDLKTLLQNSAEWDLALQKIVPYIDGVNYVKRIALSAEVDLSIVKNCMRQLMYYGCITMIDIFLHSNIY--ATTEKIS--TLVNDLALQRACIAYVAKDEEAP----------------------------------------------------PLFTTVFSVYCALQPSIPVSQLWNTYQKSLVQIDVRRLVTFGLIHGFLRRIHRYPIRIDRSQRQNLALSSSPSALNVPGVSANAMT---QRVKATPPSQGIRDK-----------------------------------DKIKKMMNGEHHTDEICCTHLLRYSELEAILSS 406          
BLAST of NO08G01170 vs. NCBI_GenBank
Match: XP_008619361.1 (hypothetical protein SDRG_14977 [Saprolegnia diclina VS20] >EQC27174.1 hypothetical protein SDRG_14977 [Saprolegnia diclina VS20])

HSP 1 Score: 263.1 bits (671), Expect = 1.900e-66
Identity = 164/491 (33.40%), Postives = 241/491 (49.08%), Query Frame = 0
Query:   25 AIIYSEFDNTLGPTIRCQVPEGFLSQGFFDSISDYVITGRQLYGRTVAVTACDLQVVGFPLCIENEKYSRNTFLFNVSFVLRADADPTPYEPILRKLALTLHTLEVESEFIFRPEKKAHLHDMLHKILTDLNAREECLLALDDANVLSLKLTRVVQEPPLVGDHDVPVFLRDAAVL--KSLDWDLALRQIISHIDGVKYTKRLAMDAEMDVDCAKAALRTLAYYDFIALVDIFQFSNIYITSTTEAAAFRAFAKSPALLMECQGFVCNHAAAVTATLSSIGAATPDTSDGGVVGEEGRNGEPGXXXXXXXXXXXEAEGSTACRLLPSGEDLLQLYGACRPNLTLAEVLQTHKEKMSRIDARRFVTFGVVYGFLRRVHRYPVYIRKWNKGTEELSSSKSSIS-AGLITMPPNRPSSLPRARGAXXXXXXXXXXXXXXXXXXXXXXXXXXFSRPGFHPHSLVDQVKVLLDGTRTMDEVCVAFMRPFQELEEIV 513
            AI YSEFDN  GP I  Q P   LS   FDS+S Y+I  + L G+ + V   D+++VG+P+CIE++KY RN  LFN+ FV +   D TPY+PILRKL   + ++E E+ F+ R   KA L  +L  IL DL    EC + +D AN+++LKL   +  PP V DH+VPV +R+   L   S +WDLAL++I+ +IDGV Y KR+A+ AE+++   K  +R L YY  I ++DIF  SNIY T+        +  +   L   C  +V               A   DT                                      P    +  +Y A +P++ ++++  T+++ +  ID RR VTFG+++GFLRR+HRYP+ I +  +    LSSS SSI+ AG       R  + P   G                                       D+VK +++G    DE+C A M  + +LE I+
Sbjct:    4 AIFYSEFDNIAGPQIVYQAPANALSNEVFDSVSGYIIIDKALCGKIITVCPQDIKIVGYPVCIEDDKYHRNALLFNIGFVFQRSMDSTPYKPILRKLGSLMESMEKENGFLSREASKATLATILPAILHDLTHFSECTIPIDTANIINLKLFPKLSTPPNVHDHEVPVAIRNLKTLLQNSAEWDLALQKIVPYIDGVNYVKRIAVIAEVELSIVKNCMRQLMYYGCITMIDIFLHSNIYATTD----KISSLVEDVNLQRACVAYV---------------AKDEDTP-------------------------------------PLFPTVFSIYCALQPSVPVSQLWNTYQKSLVHIDVRRLVTFGLIHGFLRRIHRYPISIDRSQRQNMALSSSPSSITVAGSALNQQQRIKTTPPQTGLQNK-----------------------------------DKVKRMMNGEHHTDEICCANMLRYSDLEAIL 403          
BLAST of NO08G01170 vs. NCBI_GenBank
Match: XP_008864800.1 (hypothetical protein H310_02896 [Aphanomyces invadans] >ETW06725.1 hypothetical protein H310_02896 [Aphanomyces invadans])

HSP 1 Score: 261.5 bits (667), Expect = 5.500e-66
Identity = 151/407 (37.10%), Postives = 218/407 (53.56%), Query Frame = 0
Query:   26 IIYSEFDNTLGPTIRCQVPEGFLSQGFFDSISDYVITGRQLYGRTVAVTACDLQVVGFPLCIENEKYSRNTFLFNVSFVLRADADPTPYEPILRKLALTLHTLEVESEFIFRPEKKAHLHDMLHKILTDLNAREECLLALDDANVLSLKLTRVVQEPPLVGDHDVPVFLRDAAVL--KSLDWDLALRQIISHIDGVKYTKRLAMDAEMDVDCAKAALRTLAYYDFIALVDIFQFSNIYITSTTEAAAFRAFAKSPALLMECQGFVCNHAAAVTATLSSIGAATPDTSDGGVVGEEGRNGEPGXXXXXXXXXXXEAEGSTACRLLPSGEDLLQLYGACRPNLTLAEVLQTHKEKMSRIDARRFVTFGVVYGFLRRVHRYPVYI-RKWNKGTEELSSSKSSISAGLITM 430
            + YSEFDN  GP I  Q P+  LS   FDS+S Y+I  + L G+ + V   D+++VG+P+CIE++KY RN  LFN+ FV   DAD  PY+PILRKL   + ++E E  F+ +   KA L  +L  IL DL    E    +D AN+++LK+ + +  PP V +H VPV +RD   L   S++WDLAL++I+ HIDGV Y KR+A+ AE+DV   K  +R L +Y  I ++DIF  SNIY T+    +A  +      L  EC  ++                              G   EP                       PS   +  LY A +PN  +A V ++H + ++ ID RR +TFG+++G LRR+HRYPV I R  ++  + LSSS S++S    T+
Sbjct:    5 VFYSEFDNIAGPQIVYQAPQNALSNEVFDSVSGYIIIDKALCGKIITVCPQDIKIVGYPVCIEDDKYHRNALLFNIGFVFDKDADAAPYKPILRKLGALMESMEKEMGFLSKESTKATLSTILPSILHDLTMYGESTTTIDPANIINLKVFQKLPPPPDVFEHQVPVAIRDLHDLLKNSVEWDLALQKIVPHIDGVNYVKRIAIAAEVDVAIVKNCMRQLLFYGCITMIDIFMHSNIYATT----SAVHSLVNDLVLQQECIAYI------------------------------GYANEPA----------------------PSFSAVFSLYCALQPNTPVAHVWKSHHKLLAHIDVRRLITFGLIHGILRRIHRYPVIIDRLSSRPPQMLSSSPSTVSLQSATL 355          
BLAST of NO08G01170 vs. NCBI_GenBank
Match: XP_008864802.1 (hypothetical protein, variant 2 [Aphanomyces invadans] >ETW06727.1 hypothetical protein, variant 2 [Aphanomyces invadans])

HSP 1 Score: 261.5 bits (667), Expect = 5.500e-66
Identity = 151/407 (37.10%), Postives = 218/407 (53.56%), Query Frame = 0
Query:   26 IIYSEFDNTLGPTIRCQVPEGFLSQGFFDSISDYVITGRQLYGRTVAVTACDLQVVGFPLCIENEKYSRNTFLFNVSFVLRADADPTPYEPILRKLALTLHTLEVESEFIFRPEKKAHLHDMLHKILTDLNAREECLLALDDANVLSLKLTRVVQEPPLVGDHDVPVFLRDAAVL--KSLDWDLALRQIISHIDGVKYTKRLAMDAEMDVDCAKAALRTLAYYDFIALVDIFQFSNIYITSTTEAAAFRAFAKSPALLMECQGFVCNHAAAVTATLSSIGAATPDTSDGGVVGEEGRNGEPGXXXXXXXXXXXEAEGSTACRLLPSGEDLLQLYGACRPNLTLAEVLQTHKEKMSRIDARRFVTFGVVYGFLRRVHRYPVYI-RKWNKGTEELSSSKSSISAGLITM 430
            + YSEFDN  GP I  Q P+  LS   FDS+S Y+I  + L G+ + V   D+++VG+P+CIE++KY RN  LFN+ FV   DAD  PY+PILRKL   + ++E E  F+ +   KA L  +L  IL DL    E    +D AN+++LK+ + +  PP V +H VPV +RD   L   S++WDLAL++I+ HIDGV Y KR+A+ AE+DV   K  +R L +Y  I ++DIF  SNIY T+    +A  +      L  EC  ++                              G   EP                       PS   +  LY A +PN  +A V ++H + ++ ID RR +TFG+++G LRR+HRYPV I R  ++  + LSSS S++S    T+
Sbjct:    5 VFYSEFDNIAGPQIVYQAPQNALSNEVFDSVSGYIIIDKALCGKIITVCPQDIKIVGYPVCIEDDKYHRNALLFNIGFVFDKDADAAPYKPILRKLGALMESMEKEMGFLSKESTKATLSTILPSILHDLTMYGESTTTIDPANIINLKVFQKLPPPPDVFEHQVPVAIRDLHDLLKNSVEWDLALQKIVPHIDGVNYVKRIAIAAEVDVAIVKNCMRQLLFYGCITMIDIFMHSNIYATT----SAVHSLVNDLVLQQECIAYI------------------------------GYANEPA----------------------PSFSAVFSLYCALQPNTPVAHVWKSHHKLLAHIDVRRLITFGLIHGILRRIHRYPVIIDRLSSRPPQMLSSSPSTVSLQSATL 355          
BLAST of NO08G01170 vs. NCBI_GenBank
Match: XP_009521893.1 (hypothetical protein PHYSODRAFT_350366 [Phytophthora sojae] >EGZ19176.1 hypothetical protein PHYSODRAFT_350366 [Phytophthora sojae])

HSP 1 Score: 259.2 bits (661), Expect = 2.700e-65
Identity = 140/384 (36.46%), Postives = 204/384 (53.12%), Query Frame = 0
Query:   26 IIYSEFDNTLGPTIRCQVPEGFLSQGFFDSISDYVITGRQLYGRTVAVTACDLQVVGFPLCIENEKYSRNTFLFNVSFVLRADADPTPYEPILRKLALTLHTLEVESEFIFRPEKKAHLHDMLHKILTDLNAREECLLALDDANVLSLKLTRVVQEPPLVGDHDVPVFLRDAAVL--KSLDWDLALRQIISHIDGVKYTKRLAMDAEMDVDCAKAALRTLAYYDFIALVDIFQFSNIYITSTTEAAAFRAFAKSPALLMECQGFVCNHAAAVTATLSSIGAATPDTSDGGVVGEEGRNGEPGXXXXXXXXXXXEAEGSTACRLLPSGEDLLQLYGACRPNLTLAEVLQTHKEKMSRIDARRFVTFGVVYGFLRRVHRYPVYIRK 408
            + YSEFDN  GP I  Q PE  LS   FDS+S Y+I  + L G+ + V A  +++VG+P+CIE++KY RN  LFN+ FV     +  PY PILRKL   +  +E ES F++  +KK  L  +L +IL DL    EC + +D AN+++LKL   +Q+P  V ++ VPV +RD   L   S +WDLAL+QI+  IDGV+Y KR++++AE+++   K  +R L YY  + L+DIF  SNIY  +   A      A  P L  EC  ++     A                                                     PS   +  LY + +P+L +++    + E +S ID RRF+TFG+++GFLRRVHRYP+ I +
Sbjct:    5 LFYSEFDNVAGPVILFQAPENVLSNEVFDSVSGYIIIDKALCGKIITVRAQQMKIVGYPMCIEDDKYHRNALLFNIGFVFDEHVETAPYRPILRKLGALVEGMEKESGFLYNSDKKELLGSILPQILRDLTLHGECTIPVDTANIINLKLFPTLQDPAPVFEYQVPVAIRDLRALLENSAEWDLALQQIVPFIDGVRYVKRISLEAEVEIAIVKKCVRQLLYYGCVTLIDIFLHSNIYANTPKIA----VLANDPKLQAECAVYIAKSGHAP----------------------------------------------------PSFARIFALYCSVQPSLRMSDFCVVYSESLSLIDVRRFITFGLIHGFLRRVHRYPICIER 332          
The following BLAST results are available for this feature:
BLAST of NO08G01170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26767.11.000e-15257.34Nitrogen permease regulator 2 [Nannochloropsis gad... [more]
XP_009834746.19.000e-6935.09hypothetical protein H257_10021 [Aphanomyces astac... [more]
XP_009834750.12.000e-6834.69hypothetical protein, variant 1 [Aphanomyces astac... [more]
XP_008864801.16.500e-6733.74hypothetical protein, variant 1 [Aphanomyces invad... [more]
OQR95534.11.100e-6633.20hypothetical protein THRCLA_07784 [Thraustotheca c... [more]
OQR96411.11.400e-6633.00hypothetical protein ACHHYP_15825 [Achlya hypogyna... [more]
XP_008619361.11.900e-6633.40hypothetical protein SDRG_14977 [Saprolegnia dicli... [more]
XP_008864800.15.500e-6637.10hypothetical protein H310_02896 [Aphanomyces invad... [more]
XP_008864802.15.500e-6637.10hypothetical protein, variant 2 [Aphanomyces invad... [more]
XP_009521893.12.700e-6536.46hypothetical protein PHYSODRAFT_350366 [Phytophtho... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008937NSK008937Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01170.1NO08G01170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100001g24gene3934Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01170.1NO08G01170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01170 ID=NO08G01170|Name=NO08G01170|organism=Nannochloropsis oceanica|type=gene|length=2036bp
ATGAACGAGAGAGGTAGTCATAGTCAAGCAGCAAACGCAGCACAAGCATC
AGGCCAAGCAGCGACGCTACTGGCAATCATCTACAGCGAGTTCGATAATA
CGCTAGGGCCTACGATACGATGCCAGGTGCCCGAGGGgtgcgtatgcttg
gtctgtgtgtcattgcgtcttcttggtatccctcccacctcgccttctcc
atcacgctttccatcccaaccgcacgcctacatacagCTTCTTGTCCCAA
GGCTTTTTTGACAGCATTTCCGACTACGTCATCACGGGACGGCAGCTCTA
TGGACGCACAGTTGCTGTGACGGCTTGCGACCTCCAAGTGGTGGGCTTCC
CCTTATGCATCGAGAATGAAAAGgtccgtcccttcgtgaaacgtcacctc
tctcctgccctctctacatttcctctcacgcacccatttcctcctgtatt
tacccaacgaaacagTACTCCCGCAATACGTTTCTTTTTAACGTTAGCTT
TGTCCTGCGCGCAGATGCGGACCCCACCCCGTACGAGCCTATTCTTCGGA
AGCTTGCCCTTACCCTCCATACCTTGGAGGTAGAGAGCGAGTTCATCTTC
CGCCCAGAAAAAAAAGCACACCTTCACGACATGCTTCACAAGATTTTGAC
AGATTTAAATGCGCGTGAGGAGTGTCTGTTAGCCTTGGATGACGCGAACG
TATTGAGTTTAAAGCTGACGAGGGTGGTGCAGgtagagagggagggaaca
cgcatatcgggcgaaccccttctcttaaaacgcccatgtatcgcatgata
ctttagaatgtattcacagcagcaatttttacactgactcattcgctcat
cgcgtattcccgttccatcacttccctccactctttcccaagGAACCCCC
TCTGGTCGGAGACCACGACGTGCCTGTCTTCCTCCGCGATGCCGCCGTGC
TCAAAAGTTTAGATTGGGACCTCGCTCTACGGCAAATCATTTCTCACATT
GATGGAGTCAAGTACACCAAAAGGCTGGCGATGGACGCTGAGgtacggga
acgggagggggaggaagcgaggagggaggagatgtgaaagaggactgggt
gtccttatcttcctccctccctctctcttcctccctccttttcttcagAT
GGACGTGGACTGCGCTAAAGCCGCCTTGCGCACCTTGGCCTACTATGACT
TCATCGCCTTGGTGGATATATTCCAATTTTCAAACATCTACATTACAAGC
ACAACAGAAGCGGCGGCTTTCCGCGCTTTTGCCAAGAGCCCGGCGTTGCT
GATGGAATGTCAGGGCTTCGTGTGTAACCATGCTGCTGCGGTCACTGCTA
CTCTTTCTAGCATTGGTGCTGCTACTCCCGACACTTCTGATGGAGGGGTA
GTGGGGGAGGAAGGGAGAAATGGAGAACCAGGGAGAGGAGAAGGAGGGGG
TCCAGGACGAGGAGAAGAGGCCGAAGGAAGCACAGCTTGCCGGCTGCTAC
CCAGCGGAGAGGATCTGTTACAATTGTACGGTGCTTGTCGACCCAACCTG
ACACTTGCAGAGGTACTGCAAACACATAAAGAGAAAATGAGTCGGATTGA
TGCTCGCCGCTTCGTGACGTTTGGCGTGGTGTATGGCTTCTTGCGTAGGG
TGCATCGATACCCGGTGTATATACGGAAATGGAACAAGGGGACTGAAGAA
TTGAGCAGCAGTAAGAGTAGCATTTCTGCGGGCTTGATAACAATGCCGCC
GAATCGGCCCTCATCGCTGCCGCGGGCACGAGGAGCACCTCAGCAGCATC
ACCACCACCAGCATCACCACCACCAGCAACAGCGACAGGAAGAGAAACAG
CAGCAGCAGCAGCAGTTTTCTCGGCCGGGCTTTCACCCACATTCTCTAGT
GGATCAAGTAAAGGTCTTGTTGGACGGGACACGGACTATGGACGAGGTAT
GCGTGGCGTTTATGCGGCCCTTTCAGGAGCTTGAAGAAATTGTTCTCTCC
GCAGGGGATGGGGAGGTTTTGATAGTGTATAAATAG
back to top

protein sequence of NO08G01170.1

>NO08G01170.1-protein ID=NO08G01170.1-protein|Name=NO08G01170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=526bp
MNERGSHSQAANAAQASGQAATLLAIIYSEFDNTLGPTIRCQVPEGFLSQ
GFFDSISDYVITGRQLYGRTVAVTACDLQVVGFPLCIENEKYSRNTFLFN
VSFVLRADADPTPYEPILRKLALTLHTLEVESEFIFRPEKKAHLHDMLHK
ILTDLNAREECLLALDDANVLSLKLTRVVQEPPLVGDHDVPVFLRDAAVL
KSLDWDLALRQIISHIDGVKYTKRLAMDAEMDVDCAKAALRTLAYYDFIA
LVDIFQFSNIYITSTTEAAAFRAFAKSPALLMECQGFVCNHAAAVTATLS
SIGAATPDTSDGGVVGEEGRNGEPGRGEGGGPGRGEEAEGSTACRLLPSG
EDLLQLYGACRPNLTLAEVLQTHKEKMSRIDARRFVTFGVVYGFLRRVHR
YPVYIRKWNKGTEELSSSKSSISAGLITMPPNRPSSLPRARGAPQQHHHH
QHHHHQQQRQEEKQQQQQQFSRPGFHPHSLVDQVKVLLDGTRTMDEVCVA
FMRPFQELEEIVLSAGDGEVLIVYK*
back to top
Synonyms
Publications