NO08G00940, NO08G00940 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO08G00940
Unique Name	NO08G00940
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2669
Alignment location	chr8:302937..305605 -

Link to JBrowse

Properties


Property Name	Value
Description	Had-superfamily subfamily iia hydrolase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr8	genome	chr8:302937..305605 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036412	HAD-like_sf
IPR006357	HAD-SF_hydro_IIA

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity

Homology

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BLAST of NO08G00940 vs. NCBI_GenBank
Match: EWM26779.1 (had-superfamily subfamily iia hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 549.7 bits (1415), Expect = 7.600e-153
Identity = 265/374 (70.86%), Postives = 310/374 (82.89%), Query Frame = 0

Query:   28 RHSAQALSSCRS---ISSTSAAHVVPFAIACDIDGVLVRGGTPIPGAGPVLEYLVDSQRSPNLSRRLPYIFITNGGGCLEEAKATEICDVFFPGLSHPIRSSQILLSHTPMRSLLPQYKDKQILALGSRDYTAVCRSYGFQNVVTVEDVLHAHPELYPFKTYHKRLDLHKDSFSAIFILHDPVDWAPEIQVLCDLLEEGKLSSGSSSSSNSAKKGHIPVYSSNSDLVYSSSHKVPRLAQGAFLAAWETVYQKCYGGTKIDITRFGKPWETSYRHAEKMLVHEARLLGLTGKDPAPHQAHPHKNFPIKRVYAIGDNPSSDVEGANRADGHVCEWISILVKTGVFNDDSAEHKAKYVVADIAEAFRLILELEKYQL 399
            R  A   + CR     S+ ++A  VPFA+A DIDGVLVRGG  IPGAG VLEYLV++Q +PN++RR+P++F+TNGGGC+E+AKA E+ DVFFP L  PIR SQ++LSHTPM+SLLP YKDKQILALGS+DY AVCR+YGFQ+VVTVEDVLHAHPELYPFKTYHKR DLH D F+A+FILHDPVDWAPEIQVLCD+ E G+L       ++S K  HIPVYSSNSDLV+SS + VPRLAQGAFL AWE VY+ CYGG  I+ITRFGKPWE+SYRHAEKMLVHEARLLGLTGKD  PH+ H HK++PI+RVYA+GDNP SDVEGANRADGH CEW+SILVKTGV+  +   H AK+VVAD+ EAFRLILELE Y +
Sbjct:   24 RKLASVRAKCRPRTLSSAATSASPVPFAVAFDIDGVLVRGGNQIPGAGRVLEYLVEAQSNPNVARRVPFVFLTNGGGCMEDAKAHEMSDVFFPELPVPIRPSQVMLSHTPMKSLLPLYKDKQILALGSKDYAAVCRAYGFQHVVTVEDVLHAHPELYPFKTYHKRHDLHTDPFAAVFILHDPVDWAPEIQVLCDVFEGGRLV--GKDPADSGKHSHIPVYSSNSDLVFSSGYAVPRLAQGAFLTAWEAVYRACYGGKGIEITRFGKPWESSYRHAEKMLVHEARLLGLTGKDLPPHKPHEHKHYPIQRVYAVGDNPLSDVEGANRADGHHCEWVSILVKTGVYK-EGMPHAAKHVVADVTEAFRLILELEGYDI 394

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BLAST of NO08G00940 vs. NCBI_GenBank
Match: XP_005853349.1 (had-superfamily subfamily iia hydrolase, partial [Nannochloropsis gaditana CCMP526] >EKU23010.1 had-superfamily subfamily iia hydrolase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 545.8 bits (1405), Expect = 1.100e-151
Identity = 270/399 (67.67%), Postives = 321/399 (80.45%), Query Frame = 0

Query:    3 LRRLSTAAVPSTRTAVSVSSSSLCSRHSAQALSSCRS---ISSTSAAHVVPFAIACDIDGVLVRGGTPIPGAGPVLEYLVDSQRSPNLSRRLPYIFITNGGGCLEEAKATEICDVFFPGLSHPIRSSQILLSHTPMRSLLPQYKDKQILALGSRDYTAVCRSYGFQNVVTVEDVLHAHPELYPFKTYHKRLDLHKDSFSAIFILHDPVDWAPEIQVLCDLLEEGKLSSGSSSSSNSAKKGHIPVYSSNSDLVYSSSHKVPRLAQGAFLAAWETVYQKCYGGTKIDITRFGKPWETSYRHAEKMLVHEARLLGLTGKDPAPHQAHPHKNFPIKRVYAIGDNPSSDVEGANRADGHVCEWISILVKTGVFNDDSAEHKAKYVVADIAEAFRLILELEKYQL 399
            L+ LS  A    R   + + ++   R  A   + CRS    S+ ++A  VPFA+A DIDGVLVRGG  IPGAG VLEYLV++Q +PN++RR+P++F+TNGGGC+E+AKA E+ DVFFP L  PIR SQ++LSHTPM+SLLP YKDKQILALGS+DY AVCR+YGFQ+VVTVEDVLHAHPELYPFKTYHKR DLH D F+A+FILHDPVDWAPEIQVLCD+ E G+L       ++S K  HIPVYSSNSDLV+SS + VPRLAQGAFL AWE VY+ CYGG  I+ITRFGKPWE+SYRHAEKMLVHEARLLGLTG+D  PH+ H HK++PI+RVYA+GDNP SDVEGANRADGH CEW+SILVKTGV+  +   H AK+VVAD+ EAFRLILELE Y +
Sbjct:   33 LKMLSLRAAGILRAGPATARAAQ-PRKLASVRAKCRSRTLSSAATSASPVPFAVAFDIDGVLVRGGNQIPGAGRVLEYLVEAQSNPNVARRVPFVFLTNGGGCMEDAKAHEMSDVFFPELPVPIRPSQVMLSHTPMKSLLPLYKDKQILALGSKDYAAVCRAYGFQHVVTVEDVLHAHPELYPFKTYHKRHDLHTDPFAAVFILHDPVDWAPEIQVLCDVFEGGRLV--GKDPADSGKHSHIPVYSSNSDLVFSSGYAVPRLAQGAFLTAWEAVYRACYGGKGIEITRFGKPWESSYRHAEKMLVHEARLLGLTGEDLPPHKPHEHKHYPIQRVYAVGDNPLSDVEGANRADGHHCEWVSILVKTGVYK-EGMPHAAKHVVADVTEAFRLILELEGYDI 427

[Close]

BLAST of NO08G00940 vs. NCBI_GenBank
Match: POM80514.1 (TIGR01456 family HAD hydrolase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 245.7 bits (626), Expect = 2.400e-61
Identity = 148/373 (39.68%), Postives = 211/373 (56.57%), Query Frame = 0

Query:   24 SLCSRHSAQALSSCRSISSTSAAHVVPFAIACDIDGVLVRGGTPIPGAGPVLEYLVDSQRSPNLSRRLPYIFITNGGGCLEEAKATEICDVFFPGLSHPIRSSQILLSHTPMRSLLPQYKDKQILALGSRDYTAVCRSYGFQNVVTVEDVLHAHPELYPFKTYHKRL-DLHKDSFSAIFILHDPVDWAPEIQVLCDLLEEGKLSSGSSSSSNSAKKGHIPVYSSNSDLVYSSSHKVPRLAQGAFLAAWETVYQKCYGGTKIDITRFGKPWETSYRHAEKMLVHEARLLGLTGKDPAPHQAHPHKNFPIKRVYAIGDNPSSDVEGANRADGHVCEWISILVKTGVFN-DDSAEHKAKYVVADIAEAFRLILELE 395
            SL  R+S +AL S  S  S +AA    F IA DIDGVL+RGG  +P A  VLE L         +  +P+IF+TNGGGC+EE KA  +  V    L  PI    ++LSHTPMR +   Y DK++L +GS D   V + YGF+ VV+VED+LH HP  YPF  Y +RL   H++   AI ++HDP++WAPEIQV  D+     L  G    S        P++ SN D ++S ++  PR AQGAF    + +Y+    G K+++T +GKP + +Y +AE++L                      ++ P+K +Y IGDNP SD++GAN A     EW S+LV+TG+++     EH+A  +V  + EA + I + E
Sbjct:    9 SLSKRYS-RAL-SVASEGSKTAASGPSFGIAFDIDGVLIRGGHELPKAKRVLESL--------RANNVPHIFLTNGGGCMEEDKAKNLSKV----LDLPINPEHMILSHTPMREIAKIYGDKRVLIMGSHDVWNVAKCYGFKKVVSVEDLLHHHPVQYPFIHYEQRLAPHHEEPIEAIIVMHDPINWAPEIQVAVDV-----LIGGDPPGSGRPSGKQTPLFVSNDDFIFSGAYAFPRFAQGAFTRCLKLLYED-LTGRKLEVTNYGKPHKVTYNYAERLL-----------------NTISGQSEPLKHMYGIGDNPLSDIQGANNAGD---EWTSVLVRTGIYDGSKDPEHEADVIVDGVYEAIKHIYKRE 341

[Close]

BLAST of NO08G00940 vs. NCBI_GenBank
Match: POM63325.1 (TIGR01456 family HAD hydrolase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 245.0 bits (624), Expect = 4.000e-61
Identity = 145/376 (38.56%), Postives = 209/376 (55.59%), Query Frame = 0

Query:   24 SLCSRHSAQALSSCRSIS---STSAAHVVPFAIACDIDGVLVRGGTPIPGAGPVLEYLVDSQRSPNLSRRLPYIFITNGGGCLEEAKATEICDVFFPGLSHPIRSSQILLSHTPMRSLLPQYKDKQILALGSRDYTAVCRSYGFQNVVTVEDVLHAHPELYPFKTYHKRL-DLHKDSFSAIFILHDPVDWAPEIQVLCDLLEEGKLSSGSSSSSNSAKKGHIPVYSSNSDLVYSSSHKVPRLAQGAFLAAWETVYQKCYGGTKIDITRFGKPWETSYRHAEKMLVHEARLLGLTGKDPAPHQAHPHKNFPIKRVYAIGDNPSSDVEGANRADGHVCEWISILVKTGVFN-DDSAEHKAKYVVADIAEAFRLILELE 395
            S C R  ++  S   S++   S +AA    F IA DIDGVL+RGG  +P A  VLE L         +  +P+IF+TNGGGC+EE KA  +  V    L  PI    ++LSHTPMR +   Y DK++L +GS D   V + YGF+ VV+VED+LH HP  YPF  Y +RL   H++   AI ++HDP++WAPEIQV  D+     L  G    S        P++ SN D ++S ++  PR AQGAF    + +Y+    G K+++T +GKP   +Y +AE++L                      ++ P+K +Y IGDNP SD++GAN A     EW S+LV+TG+++     EH+A  +V  + EA + I + E
Sbjct:    4 SACVRSLSKRYSRALSVASEGSKTAASGPSFGIAFDIDGVLIRGGHELPKAKRVLESL--------RANNVPHIFLTNGGGCMEEDKAKNLSKV----LDLPINPEHMILSHTPMREIAKIYGDKRVLIMGSHDVWNVAKCYGFKKVVSVEDLLHHHPVQYPFIHYEQRLAPHHEEPIEAIIVMHDPINWAPEIQVAVDV-----LIGGDPPGSGCPSGKQTPLFVSNDDFIFSGAYAFPRFAQGAFTRCLKLLYED-LTGRKLEVTNYGKPHRVTYNYAERLL-----------------NTISGQSEPLKHMYGIGDNPLSDIQGANNAGD---EWTSVLVRTGIYDGSKDPEHEADVIVDGVYEAIKHIYKRE 341

[Close]

BLAST of NO08G00940 vs. NCBI_GenBank
Match: XP_009513923.1 (hypothetical protein PHYSODRAFT_551897 [Phytophthora sojae] >EGZ26648.1 hypothetical protein PHYSODRAFT_551897 [Phytophthora sojae])

HSP 1 Score: 243.4 bits (620), Expect = 1.200e-60
Identity = 146/370 (39.46%), Postives = 207/370 (55.95%), Query Frame = 0

Query:   27 SRHSAQALSSCRSISSTSAAHVVPFAIACDIDGVLVRGGTPIPGAGPVLEYLVDSQRSPNLSRRLPYIFITNGGGCLEEAKATEICDVFFPGLSHPIRSSQILLSHTPMRSLLPQYKDKQILALGSRDYTAVCRSYGFQNVVTVEDVLHAHPELYPFKTYHKRL-DLHKDSFSAIFILHDPVDWAPEIQVLCDLLEEGKLSSGSSSSSNSAKKGHIPVYSSNSDLVYSSSHKVPRLAQGAFLAAWETVYQKCYGGTKIDITRFGKPWETSYRHAEKMLVHEARLLGLTGKDPAPHQAHPHKNFPIKRVYAIGDNPSSDVEGANRADGHVCEWISILVKTGVFN-DDSAEHKAKYVVADIAEAFRLILELE 395
            SR SA+A  S  S +S  A+    F IA DIDGVL+RGG  +  A  VL+ L +        + +P+IF+TNGGGC+EE KA  +  V    L  PI    ++LSHTPMR +   Y DK++L LGS D   V + YGF+ VV VED+LH HP  YPF  Y +RL   H++   AI ++HDP +WAPEIQV  D+     L  G    S +      P++ SN D ++S ++  PR AQGAF    + +Y+   G T +++T +GKP   +Y +AE++      L  ++G+             P+K +Y IGDNP SD++GAN A     EW S+LV+TG+++     EHK    V  + EA + I + E
Sbjct:   11 SRRSARAY-SVASDASRVASSAPSFGIAFDIDGVLIRGGHELLKAKRVLQSLRE--------KSVPHIFLTNGGGCMEEEKAKNLSKV----LDLPINPEHMILSHTPMREIAETYGDKRVLILGSYDVWNVAKCYGFKKVVRVEDLLHHHPMQYPFNHYEQRLAPRHEEPIEAIIVMHDPTNWAPEIQVAVDV-----LIGGDPPGSGNPSGKQTPLFVSNDDFIFSGAYPFPRFAQGAFTRCLKLLYEDLTGRT-LELTNYGKPHTVTYNYAERL------LNSISGQSQ-----------PLKHMYGIGDNPLSDIQGANNAGD---EWTSVLVRTGIYDGSKDPEHKPDVTVDGVYEAIKHIYKRE 341

[Close]

BLAST of NO08G00940 vs. NCBI_GenBank
Match: ETI47686.1 (TIGR01456 family HAD hydrolase [Phytophthora parasitica P1569] >ETK87621.1 TIGR01456 family HAD hydrolase [Phytophthora parasitica] >ETL94199.1 TIGR01456 family HAD hydrolase [Phytophthora parasitica] >ETM47427.1 TIGR01456 family HAD hydrolase [Phytophthora parasitica] >ETP17489.1 TIGR01456 family HAD hydrolase [Phytophthora parasitica CJ01A1])

HSP 1 Score: 243.0 bits (619), Expect = 1.500e-60
Identity = 143/370 (38.65%), Postives = 205/370 (55.41%), Query Frame = 0

Query:   27 SRHSAQALSSCRSISSTSAAHVVPFAIACDIDGVLVRGGTPIPGAGPVLEYLVDSQRSPNLSRRLPYIFITNGGGCLEEAKATEICDVFFPGLSHPIRSSQILLSHTPMRSLLPQYKDKQILALGSRDYTAVCRSYGFQNVVTVEDVLHAHPELYPFKTYHKR-LDLHKDSFSAIFILHDPVDWAPEIQVLCDLLEEGKLSSGSSSSSNSAKKGHIPVYSSNSDLVYSSSHKVPRLAQGAFLAAWETVYQKCYGGTKIDITRFGKPWETSYRHAEKMLVHEARLLGLTGKDPAPHQAHPHKNFPIKRVYAIGDNPSSDVEGANRADGHVCEWISILVKTGVFN-DDSAEHKAKYVVADIAEAFRLILELE 395
            SR  ++A S   S SS S      F IA DIDGVL+RGG  +P A  VL+ L         +  +P+IF+TNGGGC+EE KA  + ++    L  PI    ++LSHTPMR +   Y DK++L +GS D   V + YGF+ VV+VED+LH HP  YPF  Y +R    H++   AI ++HDP++WAP+IQV  D+     L  G    S        P++ SN D V+S ++  PR AQGAF    + +Y+    G K+++T +GKP   +Y +AE++L                      ++ P+K +Y IGDNP SD++GAN A     EW SILV+TG+++     EH+    V D+ EA + I + E
Sbjct:   11 SRRYSRAFSVVSS-SSNSVVSTPSFGIAFDIDGVLIRGGHELPKAKRVLQSL--------RANNVPHIFLTNGGGCMEEKKAENLSNI----LDLPINPEHMILSHTPMREIAKTYGDKRVLIMGSHDVWHVAKCYGFKKVVSVEDLLHHHPTQYPFIHYEQRPAPHHEEPIDAIIVMHDPINWAPDIQVAVDV-----LIGGDPPGSGRPSGKQTPLFVSNDDFVFSGAYPFPRFAQGAFTRCLKLLYED-LTGRKLEVTNYGKPHIITYNYAERLL-----------------NTISGQSEPLKHMYGIGDNPLSDIQGANNAGD---EWTSILVRTGIYDGSKDPEHEPDVTVDDVYEAIKHIYKRE 341

[Close]

BLAST of NO08G00940 vs. NCBI_GenBank
Match: XP_008904902.1 (TIGR01456 family HAD hydrolase [Phytophthora parasitica INRA-310] >ETN09756.1 TIGR01456 family HAD hydrolase [Phytophthora parasitica INRA-310] >ETO76401.1 TIGR01456 family HAD hydrolase [Phytophthora parasitica P1976])

HSP 1 Score: 243.0 bits (619), Expect = 1.500e-60
Identity = 143/370 (38.65%), Postives = 205/370 (55.41%), Query Frame = 0

Query:   27 SRHSAQALSSCRSISSTSAAHVVPFAIACDIDGVLVRGGTPIPGAGPVLEYLVDSQRSPNLSRRLPYIFITNGGGCLEEAKATEICDVFFPGLSHPIRSSQILLSHTPMRSLLPQYKDKQILALGSRDYTAVCRSYGFQNVVTVEDVLHAHPELYPFKTYHKR-LDLHKDSFSAIFILHDPVDWAPEIQVLCDLLEEGKLSSGSSSSSNSAKKGHIPVYSSNSDLVYSSSHKVPRLAQGAFLAAWETVYQKCYGGTKIDITRFGKPWETSYRHAEKMLVHEARLLGLTGKDPAPHQAHPHKNFPIKRVYAIGDNPSSDVEGANRADGHVCEWISILVKTGVFN-DDSAEHKAKYVVADIAEAFRLILELE 395
            SR  ++A S   S SS S      F IA DIDGVL+RGG  +P A  VL+ L         +  +P+IF+TNGGGC+EE KA  + ++    L  PI    ++LSHTPMR +   Y DK++L +GS D   V + YGF+ VV+VED+LH HP  YPF  Y +R    H++   AI ++HDP++WAP+IQV  D+     L  G    S        P++ SN D V+S ++  PR AQGAF    + +Y+    G K+++T +GKP   +Y +AE++L                      ++ P+K +Y IGDNP SD++GAN A     EW SILV+TG+++     EH+    V D+ EA + I + E
Sbjct:   11 SRRYSRAFSVVSS-SSNSVVSTPSFGIAFDIDGVLIRGGHKLPKAKRVLQSL--------RANNVPHIFLTNGGGCMEEKKAENLSNI----LDLPINPEHMILSHTPMREIAKTYGDKRVLIMGSHDVWHVAKCYGFKKVVSVEDLLHHHPTQYPFIHYEQRPAPHHEEPIDAIIVMHDPINWAPDIQVAVDV-----LIGGDPPGSGRPSGKQTPLFVSNDDFVFSGAYPFPRFAQGAFTRCLKLLYED-LTGRKLEVTNYGKPHIITYNYAERLL-----------------NTISGQSEPLKHMYGIGDNPLSDIQGANNAGD---EWTSILVRTGIYDGSKDPEHEPDVTVDDVYEAIKHIYKRE 341

[Close]

BLAST of NO08G00940 vs. NCBI_GenBank
Match: ETP45521.1 (TIGR01456 family HAD hydrolase [Phytophthora parasitica P10297])

HSP 1 Score: 242.7 bits (618), Expect = 2.000e-60
Identity = 142/370 (38.38%), Postives = 205/370 (55.41%), Query Frame = 0

Query:   27 SRHSAQALSSCRSISSTSAAHVVPFAIACDIDGVLVRGGTPIPGAGPVLEYLVDSQRSPNLSRRLPYIFITNGGGCLEEAKATEICDVFFPGLSHPIRSSQILLSHTPMRSLLPQYKDKQILALGSRDYTAVCRSYGFQNVVTVEDVLHAHPELYPFKTYHKR-LDLHKDSFSAIFILHDPVDWAPEIQVLCDLLEEGKLSSGSSSSSNSAKKGHIPVYSSNSDLVYSSSHKVPRLAQGAFLAAWETVYQKCYGGTKIDITRFGKPWETSYRHAEKMLVHEARLLGLTGKDPAPHQAHPHKNFPIKRVYAIGDNPSSDVEGANRADGHVCEWISILVKTGVFN-DDSAEHKAKYVVADIAEAFRLILELE 395
            SR  ++A S   S SS S      F IA DIDGVL+RGG  +P A  VL+ L         +  +P++F+TNGGGC+EE KA  + ++    L  PI    ++LSHTPMR +   Y DK++L +GS D   V + YGF+ VV+VED+LH HP  YPF  Y +R    H++   AI ++HDP++WAP+IQV  D+     L  G    S        P++ SN D V+S ++  PR AQGAF    + +Y+    G K+++T +GKP   +Y +AE++L                      ++ P+K +Y IGDNP SD++GAN A     EW SILV+TG+++     EH+    V D+ EA + I + E
Sbjct:   11 SRRYSRAFSVVSS-SSNSVVSTPSFGIAFDIDGVLIRGGHELPKAKRVLQSL--------RANNVPHVFLTNGGGCMEEKKAENLSNI----LDLPINPEHMILSHTPMREIAKTYGDKRVLIMGSHDVWHVAKCYGFKKVVSVEDLLHHHPTQYPFIHYEQRPAPHHEEPIDAIIVMHDPINWAPDIQVAVDV-----LIGGDPPGSGRPSGKQTPLFVSNDDFVFSGAYPFPRFAQGAFTRCLKLLYED-LTGRKLEVTNYGKPHIITYNYAERLL-----------------NTISGQSEPLKHMYGIGDNPLSDIQGANNAGD---EWTSILVRTGIYDGSKDPEHEPDVTVDDVYEAIKHIYKRE 341

[Close]

BLAST of NO08G00940 vs. NCBI_GenBank
Match: ETL41019.1 (TIGR01456 family HAD hydrolase [Phytophthora parasitica])

HSP 1 Score: 241.9 bits (616), Expect = 3.400e-60
Identity = 143/370 (38.65%), Postives = 204/370 (55.14%), Query Frame = 0

Query:   27 SRHSAQALSSCRSISSTSAAHVVPFAIACDIDGVLVRGGTPIPGAGPVLEYLVDSQRSPNLSRRLPYIFITNGGGCLEEAKATEICDVFFPGLSHPIRSSQILLSHTPMRSLLPQYKDKQILALGSRDYTAVCRSYGFQNVVTVEDVLHAHPELYPFKTYHKR-LDLHKDSFSAIFILHDPVDWAPEIQVLCDLLEEGKLSSGSSSSSNSAKKGHIPVYSSNSDLVYSSSHKVPRLAQGAFLAAWETVYQKCYGGTKIDITRFGKPWETSYRHAEKMLVHEARLLGLTGKDPAPHQAHPHKNFPIKRVYAIGDNPSSDVEGANRADGHVCEWISILVKTGVFN-DDSAEHKAKYVVADIAEAFRLILELE 395
            SR  ++A S   S SS S      F IA DIDGVL+RGG  +P A  VL+ L         +  +P+IF+TNGGGC+EE KA  + ++    L  PI    ++LSHTPMR +   Y DK++L +GS D   V + YGF+ VV+VED+LH HP  YPF  Y +R    H++   AI ++HDP++WAP+IQV  D      L  G    S        P++ SN D V+S ++  PR AQGAF    + +Y+    G K+++T +GKP   +Y +AE++L                      ++ P+K +Y IGDNP SD++GAN A     EW SILV+TG+++     EH+    V D+ EA + I + E
Sbjct:   11 SRRYSRAFSVVSS-SSNSVVSTPSFGIAFDIDGVLIRGGHELPKAKRVLQSL--------RANNVPHIFLTNGGGCMEEKKAENLSNI----LDLPINPEHMILSHTPMREIAKTYGDKRVLIMGSHDVWHVAKCYGFKKVVSVEDLLHHHPTQYPFIHYEQRPAPHHEEPIDAIIVMHDPINWAPDIQVAVD-----GLIGGDPPGSGRPSGKQTPLFVSNDDFVFSGAYPFPRFAQGAFTRCLKLLYED-LTGRKLEVTNYGKPHIITYNYAERLL-----------------NTISGQSEPLKHMYGIGDNPLSDIQGANNAGD---EWTSILVRTGIYDGSKDPEHEPDVTVDDVYEAIKHIYKRE 341

[Close]

BLAST of NO08G00940 vs. NCBI_GenBank
Match: XP_024584601.1 (Predicted phosphatase [Plasmopara halstedii] >CEG48232.1 Predicted phosphatase [Plasmopara halstedii])

HSP 1 Score: 240.7 bits (613), Expect = 7.600e-60
Identity = 143/368 (38.86%), Postives = 212/368 (57.61%), Query Frame = 0

Query:   30 SAQALSSCRSISSTSAAHVVP-FAIACDIDGVLVRGGTPIPGAGPVLEYLVDSQRSPNLSRRLPYIFITNGGGCLEEAKATEICDVFFPGLSHPIRSSQILLSHTPMRSLLPQYKDKQILALGSRDYTAVCRSYGFQNVVTVEDVLHAHPELYPFKTYHKRL-DLHKDSFSAIFILHDPVDWAPEIQVLCDLLEEGKLSSGSSSSSNSAKKGHIPVYSSNSDLVYSSSHKVPRLAQGAFLAAWETVYQKCYGGTKIDITRFGKPWETSYRHAEKMLVHEARLLGLTGKDPAPHQAHPHKNFPIKRVYAIGDNPSSDVEGANRADGHVCEWISILVKTGVFND-DSAEHKAKYVVADIAEAFRLILELE 395
            S  A+ +C   S+ S +   P F IA DIDGVL+RGG  +P A  VL+    S R+ N+     +IF+TNGGGC+EE+KA ++ ++   GLS  I    ++LSHTPMR L   Y DK++L +GS D   V + YGF+ VV+V+D+LH  P  YPF  Y +RL   + +   AI ++HDP++WAPEIQV  D+     L  G    S S      P++ SN D V+S  ++ PR AQGAF    + +Y+  + G K+++T FGKP   +Y +AE++      L  ++G+             P+K +Y IGDNPSSD++GAN        W S+LV+TGV++  +  +H    +V ++ EA + I + E
Sbjct:   11 SHHAVRTCFVASNASKSSTCPSFGIAFDIDGVLIRGGHELPNAKRVLQ----SLRANNVQ----HIFLTNGGGCMEESKAEKLSNIL--GLS--INPEHMILSHTPMRELTKTYGDKRVLIMGSHDVWHVAKCYGFKKVVSVQDLLHHCPAQYPFNHYEQRLAPYYNEPIEAIIVMHDPINWAPEIQVAVDV-----LIGGDPPGSGSLSGKQTPLFVSNDDFVFSGEYQSPRFAQGAFTKCLKLLYED-FTGCKLEMTHFGKPHTITYNYAERL------LNSISGQTE-----------PLKHIYGIGDNPSSDIQGANNVGE---RWTSVLVRTGVYDGVNEPDHTPDVIVDNVYEAIKHIYKRE 340

The following BLAST results are available for this feature:

BLAST of NO08G00940 vs. NCBI_GenBank

BLAST of NO08G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM26779.1	7.600e-153	70.86	had-superfamily subfamily iia hydrolase [Nannochlo...	[more]
XP_005853349.1	1.100e-151	67.67	had-superfamily subfamily iia hydrolase, partial [...	[more]
POM80514.1	2.400e-61	39.68	TIGR01456 family HAD hydrolase [Phytophthora palmi...	[more]
POM63325.1	4.000e-61	38.56	TIGR01456 family HAD hydrolase [Phytophthora palmi...	[more]
XP_009513923.1	1.200e-60	39.46	hypothetical protein PHYSODRAFT_551897 [Phytophtho...	[more]
ETI47686.1	1.500e-60	38.65	TIGR01456 family HAD hydrolase [Phytophthora paras...	[more]
XP_008904902.1	1.500e-60	38.65	TIGR01456 family HAD hydrolase [Phytophthora paras...	[more]
ETP45521.1	2.000e-60	38.38	TIGR01456 family HAD hydrolase [Phytophthora paras...	[more]
ETL41019.1	3.400e-60	38.65	TIGR01456 family HAD hydrolase [Phytophthora paras...	[more]
XP_024584601.1	7.600e-60	38.86	Predicted phosphatase [Plasmopara halstedii] >CEG4...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL109	nonsL109	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR083	ncniR083	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR141	ngnoR141	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK008962	NSK008962	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO08G00940.1	NO08G00940.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|582073	gene_3423	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100001g3	gene3953	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO08G00940.1	NO08G00940.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO08G00940 ID=NO08G00940|Name=NO08G00940|organism=Nannochloropsis oceanica|type=gene|length=2669bp
AGCAGGACAACTAATTCAAGCATGAGGAAATTCGGGATTCGATGACATAC
GACAGCACTTGGTTCCAGTCGTGTACGTGCATTCGGTGTGATTTGATCCC
AACTCTTGTCCATTTAATGCATCACCCAGAGTGCAGGGGAAGGCCACTTC
AAATAGAGACTACCTCCCGCATCCGAGTCCCTCCAAAGGCTCTACCAAAA
GTCCATATTTCTTGTTTCACATGCCCGACGCAACAAACAGCGTTCAAACT
CTTTTTGCCCCTCTGCATGGTTGTGCTCGAGGTTCTGAGGTCGCTTAGAT
TTCGTAGATGCGGGATGTGTGGATGGACCACTACAACCGTTGCCCAACAC
GGATCGCTCAAATGCCCCTTCCACAAACCACAAGAGGGCGGACCTTTAAA
TACGCACCTGGAGAGATGTCGAAAACGGCGGGGATTAACGGGAAAGGTCC
GATGCTGCCTATCCAGGAGCGTGGACAGCCTGTAATTCTATTATTCCTAA
ACACCCCCACTCTCCATTGTTTCCTCTCGCGGCAGAGACGGGCCGTCCCA
CCTGCACCGCGTCCCCATCATGCTGCTCCGTCGCTTGTCGACGGCCGCCG
TTCCCAGTACCAGGACCGCCGTGTCCGTGTCGTCCTCTTCTTTATGTAGC
AGGCACAGCGCCCAAGCCCTTTCAAGCTGCCGCTCCATATCCTCGACTTC
TGCGGCTCATGTTGTTCCATTTGCTATTGCCTGTGACATTGACGGCGTTC
TGGTGCGTGGAGGCACGCCCATTCCTGGGGCGGGACCAGTATTGGAGTAC
CTTGTCGACTCACAAAGGAGTCCGAATTTGTCCAGGCGCCTTCCTTACAT
TTTCATTACAAACGGAGGGGGATGCTTGGAGGAAGCAAAGGCCACGGAGA
TTTGCGACGTGTTTTTCCCCGGCCTGTCCCATCCTATCCGCTCTAGCCAG
gtaggtgaatgagaaataaggaggaccggggtagaaaagagagggataaa
catgtgcttgtgaatggggagggagagagcttcgtgacccacattttgca
tctgctccttttctcctcaatacttgaatcactctcttcttcctcctctt
actcaatccccctttcctccttcatacttgaatcatcctatcttcctcct
ctcaaccaaattgccacagATCCTGCTTTCCCATACGCCTATGCGCTCCC
TCCTCCCTCAGTACAAGGACAAACAAATCCTGGCCTTGGGCTCCAGAGAC
TACACTGCCGTCTGTCGGTCGTATGGCTTTCAGAACGTGGTAACGGTAGA
GGACGTACTGCACGCGCACCCAGAGCTGTACCCGTTCAAAACCTACCACA
AACGGCTTGATTTGCATAAAGACTCTTTCTCTGgtatgtcttgccatggt
ctcatagtgtatgagtgtgtggggtttaattttactggagatgttctcag
ttctaaccctcttgccttcctctcgcgtttcccttctttctctttccctc
cctccttcttcctttcttgccctctgtagCCATCTTCATCCTCCATGACC
CGGTGGACTGGGCGCCTGAGATCCAGGTACTCTGTGACCTGCTGGAAGAG
GGCAAGCTCAGCAGCGGCAGCAGCAGCAGTAGCAACAGTGCCAAGAAAGG
TCATATCCCTGTGTATTCGTCCAATTCTGACTTGGTGTACAGCAGCAGCC
ACAAGGTGCCTCGATTGGCGCAAGGTGCATTTTTGGCGGCCTGGGAGACG
GTGTATCAGAAATGCTATGGCGGAACAAAGATCGgtgagttgagtttcag
tcagagaaagagacccggagactgaatttgagtgctcggattgaacgtca
acaatcgctatgtggcacgtttcctctcccttcttcctcaaagcatcgct
ccctctttatatcccccctccctccttgtctagACATCACCCGGTTTGGC
AAGCCGTGGGAAACAAGCTACAGACATGCCGAGAAGATGCTCGTTCACGA
AGCCCGACTGCTGGGACTGACAGGAAAAGATCCGGCTCCTCACCAGGCAC
ACCCACACAAGAACTTCCCCATCAAGAGGGTGTATGCCATTGGGGATAAT
CCGTCGAGCGACGTGGAAGgtgagagcggggatggcaagggagggaggga
gggagagatggactgaaaaaccggggcgtttccaactttcgagggtttgc
cattcctgcttgcttgccctgcccttttttgtgaaaaacactcagccagc
tcgtattctattccttgtgtcctacgcagGCGCCAATCGTGCCGATGGGC
ACGTGTGCGAGTGGATCTCCATCCTTGTCAAGACGGGTGTCTTCAATGAT
GACTCCGCCGAGCACAAGGCCAAGTATGTCGTGGCTGACATTGCGGAGGC
TTTTCGTCTTATTCTCGAGCTGGAGAAGTACCAACTTTAACTGGATTTTT
TTGAAGAAACAAGAGAGGGAAGTATTTGTACATAAAATATACGAAAATAG
GGAGGGAAGGAGGGAGACGAAAAAGGATGTTTTCGTCATTTTGATTTTGT
CGATTTAAACAGAAAAACATTGCGAGGGCGACAAAACATTTGAGGGTTAA
TCAGGTAGTAACTGGAATGATTCTAAAAGCTTTCTTTTAATTAGCACGGT
AACCTCCCCACACTTTTTT

protein sequence of NO08G00940.1

>NO08G00940.1-protein ID=NO08G00940.1-protein|Name=NO08G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=399bp
MLLRRLSTAAVPSTRTAVSVSSSSLCSRHSAQALSSCRSISSTSAAHVVP
FAIACDIDGVLVRGGTPIPGAGPVLEYLVDSQRSPNLSRRLPYIFITNGG
GCLEEAKATEICDVFFPGLSHPIRSSQILLSHTPMRSLLPQYKDKQILAL
GSRDYTAVCRSYGFQNVVTVEDVLHAHPELYPFKTYHKRLDLHKDSFSAI
FILHDPVDWAPEIQVLCDLLEEGKLSSGSSSSSNSAKKGHIPVYSSNSDL
VYSSSHKVPRLAQGAFLAAWETVYQKCYGGTKIDITRFGKPWETSYRHAE
KMLVHEARLLGLTGKDPAPHQAHPHKNFPIKRVYAIGDNPSSDVEGANRA
DGHVCEWISILVKTGVFNDDSAEHKAKYVVADIAEAFRLILELEKYQL*

Synonyms

Publications