NO08G00670, NO08G00670 (gene) Nannochloropsis oceanica

Overview
NameNO08G00670
Unique NameNO08G00670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4110
Alignment locationchr8:230307..234416 +

Link to JBrowse

Properties
Property NameValue
DescriptionS-adenosylmethionine synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:230307..234416 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004478methionine adenosyltransferase activity
GO:0016740transferase activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0006556S-adenosylmethionine biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR022636S-AdoMet_synthetase_sfam
IPR002133S-AdoMet_synthetase
IPR022629S-AdoMet_synt_central
IPR022628S-AdoMet_synt_N
IPR022630S-AdoMet_synt_C
Homology
BLAST of NO08G00670 vs. NCBI_GenBank
Match: EWM26553.1 (s-adenosylmethionine synthetase [Nannochloropsis gaditana])

HSP 1 Score: 777.3 bits (2006), Expect = 2.200e-221
Identity = 380/393 (96.69%), Postives = 387/393 (98.47%), Query Frame = 0
Query:    1 MSLEDGTEFLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            MSLEDGTEFLFTSESVNEGHPDKICDQVSDAILDAC KDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVA+EEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDET+ELMPLTHLLATSIGARLTEVRK G+LDWVRPDGKTQVTVEYKVEGGRPVPQRVHT+VISTQHSE+VTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAA LCHRVLVQLSYAIGVAHPLSVFVDSYGT KT SGK+D+ELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTL I
Sbjct:    1 MSLEDGTEFLFTSESVNEGHPDKICDQVSDAILDACTKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAVEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETDELMPLTHLLATSIGARLTEVRKKGILDWVRPDGKTQVTVEYKVEGGRPVPQRVHTVVISTQHSEDVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAGLCHRVLVQLSYAIGVAHPLSVFVDSYGTAKTRSGKTDTELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLEI 393          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: XP_002176347.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42583.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 646.4 bits (1666), Expect = 5.900e-182
Identity = 318/387 (82.17%), Postives = 343/387 (88.63%), Query Frame = 0
Query:    7 TEFLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            T FLFTSESVNEGHPDK CDQVSDA+LDAC+  DE SRVACETC KTGMVMIFGEI+TAATVNYEQVIRD IK+IGYDDP KG DY T NVIVAIEEQSPDIAQSVD+    VEDIGAGDQGIMFGYATDETE LMPLTH+LAT IG++LTEVRK G  +WVRPDGKTQVT EYK+  G PVPQRVHTIVISTQH+E+VT E+I  DL+EHVIKPVVP KYLD+KTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLC R LVQLSYAIGV +PLSVFVDSYGT K   G +D++L +++ KNFDLRPGCI RDLNL+R +M KTAAYGHFGR DPDFTWEQVK L +
Sbjct:    4 TTFLFTSESVNEGHPDKFCDQVSDAVLDACIAGDEMSRVACETCCKTGMVMIFGEITTAATVNYEQVIRDAIKDIGYDDPAKGFDYKTCNVIVAIEEQSPDIAQSVDA--VKVEDIGAGDQGIMFGYATDETESLMPLTHMLATQIGSKLTEVRKNGTCEWVRPDGKTQVTCEYKLVNGVPVPQRVHTIVISTQHAEDVTNEQIAADLMEHVIKPVVPEKYLDEKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCKRALVQLSYAIGVPYPLSVFVDSYGTVK--EGMTDADLTEVINKNFDLRPGCIIRDLNLRRAVMRKTAAYGHFGREDPDFTWEQVKELKL 386          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: BAH30214.1 (methionine S-adenosyl transferase [Ditylum brightwellii])

HSP 1 Score: 646.0 bits (1665), Expect = 7.700e-182
Identity = 320/383 (83.55%), Postives = 340/383 (88.77%), Query Frame = 0
Query:    9 FLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTL 392
            FLFTSESVNEGHPDK CDQVSDA+LDACV  D  SRVACETC KTGMVMIFGEI+T+ TVNYEQVIRD IK+IGYDDP KG DY T NVIVAIEEQSPDIAQSVD+    VEDIGAGDQGIMFGYATDETEELMPLTH+LATS+G++LTEVRK G  DWVRPDGKTQVT EYK+  G PVPQRVHTIVISTQHSE+VT ++I  DL+EHVIKPVVP KYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAA LC R LVQLSYAIGV +PLSVFVDSYGT     GKSDS+L  IV  NFDLRPGCI RDL+LKRP+M KTAAYGHFGR+DPDFTWE+VK L
Sbjct:    4 FLFTSESVNEGHPDKFCDQVSDAVLDACVAGDATSRVACETCCKTGMVMIFGEITTSTTVNYEQVIRDAIKDIGYDDPAKGFDYKTCNVIVAIEEQSPDIAQSVDA--VKVEDIGAGDQGIMFGYATDETEELMPLTHMLATSLGSKLTEVRKNGTCDWVRPDGKTQVTCEYKLVDGVPVPQRVHTIVISTQHSEDVTNDQISSDLMEHVIKPVVPEKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAGLCKRALVQLSYAIGVPYPLSVFVDSYGT--VTEGKSDSDLTDIVNSNFDLRPGCIIRDLDLKRPVMRKTAAYGHFGRDDPDFTWEKVKEL 382          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: AEK80411.1 (S-adenosyl-methionine synthetase [Undaria pinnatifida])

HSP 1 Score: 644.4 bits (1661), Expect = 2.200e-181
Identity = 314/385 (81.56%), Postives = 339/385 (88.05%), Query Frame = 0
Query:    9 FLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            FLFTSESVNEGHPDKICDQVSDA+LDAC+KDDE SRVACETCTKTGMVMIFGEI+T A VNYEQVIRD +KEIGYDD  KGLDYNT  V+VA+EEQSPDIAQSVD+    VEDIGAGDQGIMFGYATDETE LMPL+H LAT +GARLTEVRK G+ DW RPDGKTQVTV YK E GR VPQRVHT+VIS QH ++V+ EKIR DL+EHVIK VVPAKYLDD TIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKD TKVDRSAAYAARWVAKSLV+A LCHRVLVQLSYAIGV +PLS+ VDSYGTGKT SGKSD +L +I+  NFDLRPGC+ RDL+L+RPI  KTAAYGHFGR D DFTWE  K L +
Sbjct:   15 FLFTSESVNEGHPDKICDQVSDAVLDACLKDDERSRVACETCTKTGMVMIFGEITTNANVNYEQVIRDALKEIGYDDTAKGLDYNTCGVVVAVEEQSPDIAQSVDA--ARVEDIGAGDQGIMFGYATDETESLMPLSHELATQLGARLTEVRKKGICDWCRPDGKTQVTVAYKEENGRMVPQRVHTVVISCQHDDDVSNEKIRADLMEHVIKHVVPAKYLDDNTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVSAGLCHRVLVQLSYAIGVPYPLSIHVDSYGTGKTRSGKSDEDLVEIINNNFDLRPGCLLRDLSLRRPIFQKTAAYGHFGRTDADFTWEVPKDLTV 397          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: GAX25367.1 (S-adenosylmethionine synthetase [Fistulifera solaris] >GAX17078.1 S-adenosylmethionine synthetase [Fistulifera solaris])

HSP 1 Score: 642.5 bits (1656), Expect = 8.500e-181
Identity = 315/385 (81.82%), Postives = 342/385 (88.83%), Query Frame = 0
Query:    9 FLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            FLFTSESVNEGHPDK CDQVSDA+LDAC+  DE SRVACETC KTGMVMIFGEI+T++TVNYEQVIRD IK+IGYDDP KG DY T NVIVAIEEQSPDIAQSVD+     EDIGAGDQGIMFGYATDET ELMPLTH+LAT IGA+LTEVRK G  DWVRPDGKTQVT EYK+  G PVPQRVHTIVISTQHSE+VT ++I+ DL+EHVIKPVVP KYLDD TIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLV AKLC R LVQLSYAIGV +PLS+FVDSYGT K   G +D++L ++++KNFDLRPGCI RDLNL+RP M KTAAYGHFGR+DPDFTWEQ K LN+
Sbjct:    4 FLFTSESVNEGHPDKFCDQVSDAVLDACIAGDEMSRVACETCCKTGMVMIFGEITTSSTVNYEQVIRDAIKDIGYDDPAKGFDYKTCNVIVAIEEQSPDIAQSVDA--VKPEDIGAGDQGIMFGYATDETPELMPLTHVLATQIGAKLTEVRKNGTCDWVRPDGKTQVTCEYKLVDGVPVPQRVHTIVISTQHSEDVTNDQIKADLMEHVIKPVVPEKYLDDNTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVHAKLCKRALVQLSYAIGVPYPLSIFVDSYGTVK--EGMTDADLTEVIKKNFDLRPGCIIRDLNLRRPFMRKTAAYGHFGRDDPDFTWEQPKDLNL 384          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: CBJ30117.1 (S-Adenosyl-Methionine synthetase [Ectocarpus siliculosus])

HSP 1 Score: 636.0 bits (1639), Expect = 8.000e-179
Identity = 308/385 (80.00%), Postives = 338/385 (87.79%), Query Frame = 0
Query:    9 FLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            FLFTSESVNEGHPDKICDQVSDA+LDAC+KDDE SRVACETCTKTGMVMIFGEI+T + VNYEQVIRD +K+IGYDD  KGLDY T NV+VA+EEQSPDIAQSVD+    +EDIGAGDQGIMFGYATDET+ LMPL+H L+T IGARLTEVRK G+ +W RPDGKTQVTV YK E GR VPQRVHT+VISTQH ++V+ EKIR DL EHVIK VVPAKYLDD TIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKD TKVDRSAAYAARWVAKSLV A LCHRVLVQLSYAIGV +PLS+ VDSYGT KT SGK+D EL +I+  NFDLRPGC+ RDL L++PI  KTAAYGHFGR+DP+FTWE  K L +
Sbjct:   15 FLFTSESVNEGHPDKICDQVSDAVLDACLKDDERSRVACETCTKTGMVMIFGEITTNSNVNYEQVIRDALKDIGYDDTAKGLDYKTCNVVVAVEEQSPDIAQSVDAT--RIEDIGAGDQGIMFGYATDETDSLMPLSHELSTQIGARLTEVRKKGICEWCRPDGKTQVTVAYKEENGRMVPQRVHTVVISTQHDDDVSNEKIRADLQEHVIKHVVPAKYLDDDTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVHAGLCHRVLVQLSYAIGVPYPLSIHVDSYGTAKTRSGKTDEELVEIINNNFDLRPGCLLRDLQLRKPIFRKTAAYGHFGRSDPEFTWETPKDLTL 397          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: XP_009041567.1 (hypothetical protein AURANDRAFT_39248 [Aureococcus anophagefferens] >EGB03712.1 hypothetical protein AURANDRAFT_39248 [Aureococcus anophagefferens])

HSP 1 Score: 634.0 bits (1634), Expect = 3.000e-178
Identity = 304/392 (77.55%), Postives = 350/392 (89.29%), Query Frame = 0
Query:    3 LEDGTEFLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETE-ELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            +ED T FLFTSESV+EGHPDKICDQVSDA+LDACVKDDE SRVACE CTKTGM+MIFGEI+T+ATVNYE VIR+T++EIGYDDP KG+DY T+NVIVAIEEQSPDIAQSVD+    +E+IGAGDQGIMFGYATDETE + MPLTH+LAT +G RLTEVRKT +LDWVRPDGKTQVT EYK++ GRP+PQRVHTIVISTQH+E V+ E+IRE L+E V++ VVP KYLDD TIYH+NPSGRF+IGGPHGDAGLTGRKI++DTYGGWG HGGGA SGKDTTKVDRSAAYAARWVAKSLV A+LCHRVLVQL+YAIGVA+P+S+ VDSYGTG + SGK+D EL +I++ NFDLRPGCI RDL L+RP+M KTAAYGHFGR+D  FTWE  K L++
Sbjct:    1 MEDST-FLFTSESVSEGHPDKICDQVSDAVLDACVKDDETSRVACECCTKTGMIMIFGEITTSATVNYEAVIRETLREIGYDDPAKGMDYKTVNVIVAIEEQSPDIAQSVDAT--KIEEIGAGDQGIMFGYATDETEVKFMPLTHVLATQLGMRLTEVRKTKLLDWVRPDGKTQVTCEYKMKAGRPLPQRVHTIVISTQHTEAVSQEQIRESLMEQVVRAVVPGKYLDDDTIYHMNPSGRFIIGGPHGDAGLTGRKIVVDTYGGWGTHGGGALSGKDTTKVDRSAAYAARWVAKSLVNARLCHRVLVQLAYAIGVAYPISIHVDSYGTGPSLSGKTDVELVEIIKANFDLRPGCIVRDLQLRRPVMQKTAAYGHFGRDDDSFTWETPKELSL 389          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: BAH30211.1 (methionine S-adenosyl transferase [Asterionella glacialis])

HSP 1 Score: 634.0 bits (1634), Expect = 3.000e-178
Identity = 311/385 (80.78%), Postives = 341/385 (88.57%), Query Frame = 0
Query:    9 FLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            F FTSES+NEGHPDK CDQVSDA+LDAC+  D NSRVACETC KTGMVMIFGEI+TA+TVNYEQVIRD IK+IGYDDP KG DY T NVIVAIEEQSPDIAQSVD+     ED GAGDQGIMFGYATDETE LMPLTH+LATS+G++LTEVRK G  +WVRPDGKTQVT EYK++ G PVPQRVHTIVISTQHSE+VT E+I  DL+EHVI+PVVP KYLD KTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLC R LVQLSYAIGV +PLSVFVDSYGT K   G +D++L +I++KNFDLRPGCI RDL+LKR +M KTAAYG FGR+DPDFTWE+VK L +
Sbjct:    4 FFFTSESLNEGHPDKFCDQVSDAVLDACIAGDPNSRVACETCCKTGMVMIFGEITTASTVNYEQVIRDAIKDIGYDDPAKGFDYKTCNVIVAIEEQSPDIAQSVDA--VKPEDTGAGDQGIMFGYATDETESLMPLTHMLATSLGSKLTEVRKNGTCEWVRPDGKTQVTCEYKMQDGVPVPQRVHTIVISTQHSEDVTNEQICSDLMEHVIRPVVPEKYLDSKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCKRALVQLSYAIGVPYPLSVFVDSYGTVK--EGMTDADLTEIIKKNFDLRPGCIIRDLDLKRSVMRKTAAYGRFGRDDPDFTWEKVKELKL 384          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: XP_009042141.1 (hypothetical protein AURANDRAFT_34401 [Aureococcus anophagefferens] >EGB03165.1 hypothetical protein AURANDRAFT_34401 [Aureococcus anophagefferens])

HSP 1 Score: 629.0 bits (1621), Expect = 9.800e-177
Identity = 305/388 (78.61%), Postives = 343/388 (88.40%), Query Frame = 0
Query:    7 TEFLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETE-ELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            T FLFTSESV EGHPDKICDQVSDA+LDACVKDDE SRVACE CTKTGM+MIFGEI+T+ATVNYE VIR+T+KEIGYDDP KG+DY T+NVIVAIEEQSPDIAQSVD+    +E+IGAGDQG+MFGYATDETE   MPLTH LAT +G RL+EVRK+  LDWVRPDGKTQVT EY++EG RP+PQRVHTIVISTQHSE V+ E+IRE L+EHV++ VVPAKYLDD TIYH+NPSGRFVIGGPHGDAGLTGRKII DTYGGWG HGGGAFSGKDTTKVDRSAAYAARWVAKSLV A+LCHRVLVQLSYAIGVA+PL++ VDSY T  + SGK+D+EL +IV+ NFDLRPGCI RDL L+RP+M KTA YGHFGR D  FTWE+ K L++
Sbjct:    3 TLFLFTSESVCEGHPDKICDQVSDAVLDACVKDDETSRVACECCTKTGMIMIFGEITTSATVNYEAVIRETLKEIGYDDPAKGMDYKTVNVIVAIEEQSPDIAQSVDAT--KIEEIGAGDQGMMFGYATDETEGGFMPLTHCLATQLGMRLSEVRKSKALDWVRPDGKTQVTCEYRIEGRRPIPQRVHTIVISTQHSETVSQEQIREGLMEHVVRAVVPAKYLDDDTIYHMNPSGRFVIGGPHGDAGLTGRKIIADTYGGWGGHGGGAFSGKDTTKVDRSAAYAARWVAKSLVYARLCHRVLVQLSYAIGVAYPLAIHVDSYDTAPSLSGKTDAELVEIVKANFDLRPGCIVRDLQLRRPVMQKTAIYGHFGREDEAFTWEKAKELSL 388          
BLAST of NO08G00670 vs. NCBI_GenBank
Match: KUF90560.1 (S-adenosylmethionine synthase [Phytophthora nicotianae] >KUF96209.1 hypothetical protein AM588_10009027 [Phytophthora nicotianae])

HSP 1 Score: 627.1 bits (1616), Expect = 3.700e-176
Identity = 304/385 (78.96%), Postives = 342/385 (88.83%), Query Frame = 0
Query:    9 FLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
            FLFTSESVNEGHPDK+CDQ+SDA+LDACV +D NSRVACETC KTGMVMIFGEIST A VNYE+VIRDTIKEIGYDDP KGLDY T+NVIVAIE+QSPDIAQSVDS T   ED+GAGDQGIMFGYA+DET ELMPL+H+LAT +G++LTEVRK G LDW+RPDGKTQVTVEYK E GR VPQRVHT+VISTQH+++VT E+I  DL++HVI+ V+P KYLDDKT+YHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKS+VA  L HR+LVQLSYAIGV +PLS+ VDSYGT K   G +D +L +I++KNFDLRPG IQ+ L+LKRP+M KTAAYGHFGR D DFTWE VK L +
Sbjct:   11 FLFTSESVNEGHPDKLCDQISDAVLDACVSEDPNSRVACETCAKTGMVMIFGEISTKAIVNYEKVIRDTIKEIGYDDPAKGLDYKTVNVIVAIEQQSPDIAQSVDSVTD--EDVGAGDQGIMFGYASDETPELMPLSHVLATKLGSKLTEVRKNGTLDWIRPDGKTQVTVEYKQEDGRMVPQRVHTVVISTQHNDDVTNEQIAADLMKHVIQTVIPEKYLDDKTVYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSVVAKGLAHRLLVQLSYAIGVPYPLSIHVDSYGTVK--EGLTDDDLVEIIKKNFDLRPGMIQKTLHLKRPVMQKTAAYGHFGREDADFTWETVKELEL 391          
The following BLAST results are available for this feature:
BLAST of NO08G00670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26553.12.200e-22196.69s-adenosylmethionine synthetase [Nannochloropsis g... [more]
XP_002176347.15.900e-18282.17predicted protein [Phaeodactylum tricornutum CCAP ... [more]
BAH30214.17.700e-18283.55methionine S-adenosyl transferase [Ditylum brightw... [more]
AEK80411.12.200e-18181.56S-adenosyl-methionine synthetase [Undaria pinnatif... [more]
GAX25367.18.500e-18181.82S-adenosylmethionine synthetase [Fistulifera solar... [more]
CBJ30117.18.000e-17980.00S-Adenosyl-Methionine synthetase [Ectocarpus silic... [more]
XP_009041567.13.000e-17877.55hypothetical protein AURANDRAFT_39248 [Aureococcus... [more]
BAH30211.13.000e-17880.78methionine S-adenosyl transferase [Asterionella gl... [more]
XP_009042141.19.800e-17778.61hypothetical protein AURANDRAFT_34401 [Aureococcus... [more]
KUF90560.13.700e-17678.96S-adenosylmethionine synthase [Phytophthora nicoti... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008996NSK008996Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G00670.1NO08G00670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|359190gene_3397Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100084g4gene3977Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G00670.1NO08G00670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G00670 ID=NO08G00670|Name=NO08G00670|organism=Nannochloropsis oceanica|type=gene|length=4110bp
CTTCACATTGAGACGTTGCTGCCCCACTTTTGGCCCAATACGGTCAATCC
GCAGACGATTCGCGCAAGAACCAACAACTGCGCTAAGGAGTCCCCTCGTC
ATAACCCTTGCGACCCCTCTGCACCACGTGTGGTTGGCTTACCGCGGAAA
GTCTAGTGGCGTGCCTCATCTTTTTCTTGCTTGTTGCGTTTCATTGTTTT
TAAAGTGCAAAAGCATCATGATCTAGCTCGTCGAACTGAGGAAGAAGCAG
TCGGTGGGGAGCGTGTGGCTCTCATCCTCTCGTGTCGCTGGCTTGGGGGA
AAAGGAAGAAGCGTCCAAAGCGGACGCAGAGGCTTGGCTTTGCTTGCTTG
GCTGCTGTATGACGACTTTTCATTGCGATTGTTCTGCGTTCCCTGCGACG
GGGGCCATGGAAGCCTGAAATGTGACATTCGCCCCTTGTCCGTGCCTTGA
TCTTGTGTAGAATTCCTGCGGTGCCCCCTCACCACACTGCGCTCGCCTAA
TTTTAGTATTCCAGCACTCACCCACCCACTCACCCCCGCTCACCTTCGCC
CCGCGCAGACCCACCTCCACCCCACCACTGACCACCATGTCTCTGGAAGA
TGGCACCGAGTTCCTCTTCACTTCTGAATCCGTAAACGAAGGCCACCCCG
gtacgtagcacgggtggtagaaagatgtgttgctagattccttccttctg
cgcttgtctgttctgtctgtggtcgtcatggcttgcacatcatgaccacg
tcctgcgcgtcgcatctcccccagtttgatgctcatgctctttccctatt
tcagACAAAATCTGCGATCAGGTTTCTGATGCCATCTTGGATGCCTGCGT
CAAGGACGATGAGAACTCGCGCGTCGCCTGCGgtacgtttgcaggctggg
agggcggggaggaaaaaagggaggcgcttggcaagatccttgcatccgca
tccttgcatccgcagatgcgtcctcgtgcttgtgaaagtgaagatgtcgt
taaacacgtcactgcgtcgcactgacataatcttctccccctatcgttgc
tacccacctctccccgcagAGACCTGCACCAAGACCGGCATGGTCATGAT
CTTCGGTGAGATCTCCACTGCTGCCACCGTCAACTACGAGCAGgtatgca
ctctgcgttgtacattccttcctttcctccttccttgccctccttcttcc
cctcctcccttcgtccttccagttctttcctccctttccaattctgtgac
cgacccgtggccgtcaccttccaatcgattgacctttttattgccttctc
tctcatcttctctgcctttcacctcacttcacccggacaatcaacttata
ctttgccacacgctcatcccttcgtccatcgctccttccgtccctctttc
cctcccccgcctttccagGTGATCCGTGACACGATCAAGGAGATCGGGTA
CGACGACCCCGGGAAGGGCCTGGACTACAACACCATGAATGTGATCGTGG
CCATCGAAGAGCAATCCCCCGATATCGCCCAGTCGGTCGACTCCCGCACG
GGCAACGTGGAGGACATCGGCGCCGGCGACCAGGGAATCATGTTCGGgtg
ggtaaaagagggaggaaagggaagaaggggagaaagggtaataagtgaca
cgaatgtacttttaatccatcattattgttttgtctcctcacactatgtt
ctaaagcgcggtgttcaactgatcttttctccctccctccctccctccct
ccctccctagCTATGCCACGGACGAGACGGAGGAGCTCATGCCTCTCACC
CACCTGCTGGCCACCTCCATCGGGGCCCGTCTGACAGAGGTGCGCAAGAC
AGGCGTGCTTGATTGGGTGCGCCCCGACGGCAAGACGCAAGTCACCGTTG
AGgtaggtggggagggagggagggagggagggagggaagggagggagagg
gaaggaggtatggatgtggggtgggggaaggaggtagaggagatggcaag
gaggcaagaaacgaggcgacatatgatacggtcgactcacctttctccct
ccctctctccctcccttcctcagTACAAGGTGGAGGGCGGGAGGCCCGTG
CCTCAACGGGTCCACACGATCGTTATCTCGACGCAGCACTCGGAGGAGGT
GACGCTGGAGAAGATCCGCGAGGATTTGCTCGAGCACGTGATCAAGCCGG
TGGTGCCTGCCAAGTACCTGGACGACAAGACCATCTACCACCTGAACCCC
TCGGGGCGTTTCGTGATCGGTGGCCCACACGGGGACGCCGGCTTAACGGG
CAGGAAGATCATCATCGACACGTATGGCGGGTGGGGCGCCCATGGTGGCG
GTGCCTTCTCGGGCAAGGACACGACCAAAGTGGATCGCTCGGCGGCGTAC
GCGGCCCGTTGGGTGGCCAAGAGCCTCGTGGCGGCCAAACTGTGCCATCG
GGTGCTCGTGCAGTTGTCCTATGCCATTGGCGTGGCTCACCCCCTGTCGG
TGTTTGTCGATTCGTACGGCACGGGCAAGACGGCCTCAGGAAAGTCGGAC
TCGGAGCTGTGCAAAATCGTCGAGAAGAATTTCGACCTCCGCCCCGGgta
tgtgccctctttgcttttgtggccctgccctctccttcccttccctctcc
ttccctccctccctccctccctccctcccgcctcccgcgtgacgtgcacc
tggaaccctattatgagcaaaaccactgcgacattccactcatcctactc
tcctccctcttccccacagCTGCATCCAGCGCGACCTGAACCTGAAGCGC
CCCATCATGACCAAGACGGCGGCTTACGGACACTTCGGCCGAAACGACCC
GGATTTCACTTGGGAGCAGGTGAAGACTCTCAACATTTAAATTTGAGAGG
GCGGGAGGGAAGGAGGGACGGAAGGAGGGAGGGGTAGAGTGAGGGATGAT
GGGGTGGGTCTGAGTCACGTTTCCATCCTCGGGGTTCTTTCGAGGAAAGA
AGGGAGGGAGGGAAGGAGGGATGGATGGACAGAGGGAGGGATTGAGGATG
TCACTCTGGCAATTGTTTTTGCCTTGTTCGGCATGGTGGAATCAAGTAAT
AAGCGATTGGGAGTCGGTTTTCGTCGTGGTAGACGAGGGAGGGAGAGAGG
GAGGGAGGGACGAGGGGCCCCGTGTCGCATTCGTCGTTCGGAGTTTGAAG
GAGGGGGAGGGAGGGGCGGAGGGAGAGAAGGAGGAATAGATTAATGGAGA
CCTGCATGTGTCGAGTCTGCATATGTGTGTGTGCGTGTCCAGGTGGTGGT
GGTTGTGGTGTTTTTGGTGAGGAGAACGAGAAGCAGCTGGAGGAGGAGGA
GGAGTAGCAGCACCTTCATGTCGGTTTCGGAAAGTCCCTTGTTTTCCCTT
GGAATCCTCGCACCATAACCCTGCCACCAGCATCATCATCATCATCATAG
TATCAACCTAATCACTGTCGTCACCGCCGTCTTTGTCTTGTCCTTACTGA
TGCAGCCGTTGACCGCAATGGTGGTTTGATTGAGTCAATTTAATGTCATT
TTGGATCGTGATCCATGACTTGCAGATGCCGTCATCGACCTTGTCATGAA
TCAAACAGCAGCAGTAGGCACAGGAGCAGTGGCAGCAGCAGCAGCAGCGA
GGGGTATGAAGTATTGAGACAATGCGACCCGAAAAGAATTAATGACAGCT
GGCCCTTCAAGAGGCACGTACACAGATACATAAATATACACACGTATGTT
TATACACACACTCGTGCCTTCATACGTCCGTATAGACAAGCAACATCCAT
CTCTTAACGCTCTTTGACTGCTCTTTCGTCTTCGGGGACGACTATCCCCA
CCTTCGAGTGTGAGATGTCTTCAATTCTTTCTTGATATCGGGGTCTCTAA
TTACCCCTGGCCATGCCCCTCCTTCTCTCACCCACACCAGGTATGTCACA
CGTGCCGTTGTTTACGTATGTTGCAGCTTATTCTTTGATTCCCTCTGCCT
TCATACACCTCCGTTCTCCCTCCATGTAATGTTCCCCTTTTCTGTCTTTC
CGCCAAGCAAGCACGCAATTGCCTTCCCTTCCCCCCTCCCTCCCTCCCTC
CCTCCACCCC
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protein sequence of NO08G00670.1

>NO08G00670.1-protein ID=NO08G00670.1-protein|Name=NO08G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=394bp
MSLEDGTEFLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETC
TKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVA
IEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLAT
SIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQ
HSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGD
AGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAA
KLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFD
LRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI*
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Synonyms
Publications