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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr8 | genome | chr8:230307..234416 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO08G00670.1 vs.
Match: EWM26553.1 (s-adenosylmethionine synthetase [Nannochloropsis gaditana]) HSP 1 Score: 777.3 bits (2006), Expect = 2.200e-221 Identity = 380/393 (96.69%), Postives = 387/393 (98.47%), Query Frame = 0
Query: 1 MSLEDGTEFLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAIEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLATSIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQHSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAKLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI 394
MSLEDGTEFLFTSESVNEGHPDKICDQVSDAILDAC KDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVA+EEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDET+ELMPLTHLLATSIGARLTEVRK G+LDWVRPDGKTQVTVEYKVEGGRPVPQRVHT+VISTQHSE+VTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAA LCHRVLVQLSYAIGVAHPLSVFVDSYGT KT SGK+D+ELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTL I
Sbjct: 1 MSLEDGTEFLFTSESVNEGHPDKICDQVSDAILDACTKDDENSRVACETCTKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVAVEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETDELMPLTHLLATSIGARLTEVRKKGILDWVRPDGKTQVTVEYKVEGGRPVPQRVHTVVISTQHSEDVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAAGLCHRVLVQLSYAIGVAHPLSVFVDSYGTAKTRSGKTDTELCKIVEKNFDLRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLEI 393
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO08G00670.1 ID=NO08G00670.1|Name=NO08G00670.1|organism=Nannochloropsis oceanica|type=mRNA|length=2988bp CTTCACATTGAGACGTTGCTGCCCCACTTTTGGCCCAATACGGTCAATCC GCAGACGATTCGCGCAAGAACCAACAACTGCGCTAAGGAGTCCCCTCGTC ATAACCCTTGCGACCCCTCTGCACCACGTGTGGTTGGCTTACCGCGGAAA GTCTAGTGGCGTGCCTCATCTTTTTCTTGCTTGTTGCGTTTCATTGTTTT TAAAGTGCAAAAGCATCATGATCTAGCTCGTCGAACTGAGGAAGAAGCAG TCGGTGGGGAGCGTGTGGCTCTCATCCTCTCGTGTCGCTGGCTTGGGGGA AAAGGAAGAAGCGTCCAAAGCGGACGCAGAGGCTTGGCTTTGCTTGCTTG GCTGCTGTATGACGACTTTTCATTGCGATTGTTCTGCGTTCCCTGCGACG GGGGCCATGGAAGCCTGAAATGTGACATTCGCCCCTTGTCCGTGCCTTGA TCTTGTGTAGAATTCCTGCGGTGCCCCCTCACCACACTGCGCTCGCCTAA TTTTAGTATTCCAGCACTCACCCACCCACTCACCCCCGCTCACCTTCGCC CCGCGCAGACCCACCTCCACCCCACCACTGACCACCATGTCTCTGGAAGA TGGCACCGAGTTCCTCTTCACTTCTGAATCCGTAAACGAAGGCCACCCCG ACAAAATCTGCGATCAGGTTTCTGATGCCATCTTGGATGCCTGCGTCAAG GACGATGAGAACTCGCGCGTCGCCTGCGAGACCTGCACCAAGACCGGCAT GGTCATGATCTTCGGTGAGATCTCCACTGCTGCCACCGTCAACTACGAGC AGGTGATCCGTGACACGATCAAGGAGATCGGGTACGACGACCCCGGGAAG GGCCTGGACTACAACACCATGAATGTGATCGTGGCCATCGAAGAGCAATC CCCCGATATCGCCCAGTCGGTCGACTCCCGCACGGGCAACGTGGAGGACA TCGGCGCCGGCGACCAGGGAATCATGTTCGGCTATGCCACGGACGAGACG GAGGAGCTCATGCCTCTCACCCACCTGCTGGCCACCTCCATCGGGGCCCG TCTGACAGAGGTGCGCAAGACAGGCGTGCTTGATTGGGTGCGCCCCGACG GCAAGACGCAAGTCACCGTTGAGTACAAGGTGGAGGGCGGGAGGCCCGTG CCTCAACGGGTCCACACGATCGTTATCTCGACGCAGCACTCGGAGGAGGT GACGCTGGAGAAGATCCGCGAGGATTTGCTCGAGCACGTGATCAAGCCGG TGGTGCCTGCCAAGTACCTGGACGACAAGACCATCTACCACCTGAACCCC TCGGGGCGTTTCGTGATCGGTGGCCCACACGGGGACGCCGGCTTAACGGG CAGGAAGATCATCATCGACACGTATGGCGGGTGGGGCGCCCATGGTGGCG GTGCCTTCTCGGGCAAGGACACGACCAAAGTGGATCGCTCGGCGGCGTAC GCGGCCCGTTGGGTGGCCAAGAGCCTCGTGGCGGCCAAACTGTGCCATCG GGTGCTCGTGCAGTTGTCCTATGCCATTGGCGTGGCTCACCCCCTGTCGG TGTTTGTCGATTCGTACGGCACGGGCAAGACGGCCTCAGGAAAGTCGGAC TCGGAGCTGTGCAAAATCGTCGAGAAGAATTTCGACCTCCGCCCCGGCTG CATCCAGCGCGACCTGAACCTGAAGCGCCCCATCATGACCAAGACGGCGG CTTACGGACACTTCGGCCGAAACGACCCGGATTTCACTTGGGAGCAGGTG AAGACTCTCAACATTTAAATTTGAGAGGGCGGGAGGGAAGGAGGGACGGA AGGAGGGAGGGGTAGAGTGAGGGATGATGGGGTGGGTCTGAGTCACGTTT CCATCCTCGGGGTTCTTTCGAGGAAAGAAGGGAGGGAGGGAAGGAGGGAT GGATGGACAGAGGGAGGGATTGAGGATGTCACTCTGGCAATTGTTTTTGC CTTGTTCGGCATGGTGGAATCAAGTAATAAGCGATTGGGAGTCGGTTTTC GTCGTGGTAGACGAGGGAGGGAGAGAGGGAGGGAGGGACGAGGGGCCCCG TGTCGCATTCGTCGTTCGGAGTTTGAAGGAGGGGGAGGGAGGGGCGGAGG GAGAGAAGGAGGAATAGATTAATGGAGACCTGCATGTGTCGAGTCTGCAT ATGTGTGTGTGCGTGTCCAGGTGGTGGTGGTTGTGGTGTTTTTGGTGAGG AGAACGAGAAGCAGCTGGAGGAGGAGGAGGAGTAGCAGCACCTTCATGTC GGTTTCGGAAAGTCCCTTGTTTTCCCTTGGAATCCTCGCACCATAACCCT GCCACCAGCATCATCATCATCATCATAGTATCAACCTAATCACTGTCGTC ACCGCCGTCTTTGTCTTGTCCTTACTGATGCAGCCGTTGACCGCAATGGT GGTTTGATTGAGTCAATTTAATGTCATTTTGGATCGTGATCCATGACTTG CAGATGCCGTCATCGACCTTGTCATGAATCAAACAGCAGCAGTAGGCACA GGAGCAGTGGCAGCAGCAGCAGCAGCGAGGGGTATGAAGTATTGAGACAA TGCGACCCGAAAAGAATTAATGACAGCTGGCCCTTCAAGAGGCACGTACA CAGATACATAAATATACACACGTATGTTTATACACACACTCGTGCCTTCA TACGTCCGTATAGACAAGCAACATCCATCTCTTAACGCTCTTTGACTGCT CTTTCGTCTTCGGGGACGACTATCCCCACCTTCGAGTGTGAGATGTCTTC AATTCTTTCTTGATATCGGGGTCTCTAATTACCCCTGGCCATGCCCCTCC TTCTCTCACCCACACCAGGTATGTCACACGTGCCGTTGTTTACGTATGTT GCAGCTTATTCTTTGATTCCCTCTGCCTTCATACACCTCCGTTCTCCCTC CATGTAATGTTCCCCTTTTCTGTCTTTCCGCCAAGCAAGCACGCAATTGC CTTCCCTTCCCCCCTCCCTCCCTCCCTCCCTCCACCCC back to topprotein sequence of NO08G00670.1 >NO08G00670.1-protein ID=NO08G00670.1-protein|Name=NO08G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=394bp MSLEDGTEFLFTSESVNEGHPDKICDQVSDAILDACVKDDENSRVACETC TKTGMVMIFGEISTAATVNYEQVIRDTIKEIGYDDPGKGLDYNTMNVIVA IEEQSPDIAQSVDSRTGNVEDIGAGDQGIMFGYATDETEELMPLTHLLAT SIGARLTEVRKTGVLDWVRPDGKTQVTVEYKVEGGRPVPQRVHTIVISTQ HSEEVTLEKIREDLLEHVIKPVVPAKYLDDKTIYHLNPSGRFVIGGPHGD AGLTGRKIIIDTYGGWGAHGGGAFSGKDTTKVDRSAAYAARWVAKSLVAA KLCHRVLVQLSYAIGVAHPLSVFVDSYGTGKTASGKSDSELCKIVEKNFD LRPGCIQRDLNLKRPIMTKTAAYGHFGRNDPDFTWEQVKTLNI* back to topmRNA from alignment at chr8:230307..234416+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO08G00670.1 ID=NO08G00670.1|Name=NO08G00670.1|organism=Nannochloropsis oceanica|type=mRNA|length=4110bp|location=Sequence derived from alignment at chr8:230307..234416+ (Nannochloropsis oceanica) CTTCACATTGAGACGTTGCTGCCCCACTTTTGGCCCAATACGGTCAATCC
GCAGACGATTCGCGCAAGAACCAACAACTGCGCTAAGGAGTCCCCTCGTC
ATAACCCTTGCGACCCCTCTGCACCACGTGTGGTTGGCTTACCGCGGAAA
GTCTAGTGGCGTGCCTCATCTTTTTCTTGCTTGTTGCGTTTCATTGTTTT
TAAAGTGCAAAAGCATCATGATCTAGCTCGTCGAACTGAGGAAGAAGCAG
TCGGTGGGGAGCGTGTGGCTCTCATCCTCTCGTGTCGCTGGCTTGGGGGA
AAAGGAAGAAGCGTCCAAAGCGGACGCAGAGGCTTGGCTTTGCTTGCTTG
GCTGCTGTATGACGACTTTTCATTGCGATTGTTCTGCGTTCCCTGCGACG
GGGGCCATGGAAGCCTGAAATGTGACATTCGCCCCTTGTCCGTGCCTTGA
TCTTGTGTAGAATTCCTGCGGTGCCCCCTCACCACACTGCGCTCGCCTAA
TTTTAGTATTCCAGCACTCACCCACCCACTCACCCCCGCTCACCTTCGCC
CCGCGCAGACCCACCTCCACCCCACCACTGACCACCATGTCTCTGGAAGA
TGGCACCGAGTTCCTCTTCACTTCTGAATCCGTAAACGAAGGCCACCCCG
GTACGTAGCACGGGTGGTAGAAAGATGTGTTGCTAGATTCCTTCCTTCTG
CGCTTGTCTGTTCTGTCTGTGGTCGTCATGGCTTGCACATCATGACCACG
TCCTGCGCGTCGCATCTCCCCCAGTTTGATGCTCATGCTCTTTCCCTATT
TCAGACAAAATCTGCGATCAGGTTTCTGATGCCATCTTGGATGCCTGCGT
CAAGGACGATGAGAACTCGCGCGTCGCCTGCGGTACGTTTGCAGGCTGGG
AGGGCGGGGAGGAAAAAAGGGAGGCGCTTGGCAAGATCCTTGCATCCGCA
TCCTTGCATCCGCAGATGCGTCCTCGTGCTTGTGAAAGTGAAGATGTCGT
TAAACACGTCACTGCGTCGCACTGACATAATCTTCTCCCCCTATCGTTGC
TACCCACCTCTCCCCGCAGAGACCTGCACCAAGACCGGCATGGTCATGAT
CTTCGGTGAGATCTCCACTGCTGCCACCGTCAACTACGAGCAGGTATGCA
CTCTGCGTTGTACATTCCTTCCTTTCCTCCTTCCTTGCCCTCCTTCTTCC
CCTCCTCCCTTCGTCCTTCCAGTTCTTTCCTCCCTTTCCAATTCTGTGAC
CGACCCGTGGCCGTCACCTTCCAATCGATTGACCTTTTTATTGCCTTCTC
TCTCATCTTCTCTGCCTTTCACCTCACTTCACCCGGACAATCAACTTATA
CTTTGCCACACGCTCATCCCTTCGTCCATCGCTCCTTCCGTCCCTCTTTC
CCTCCCCCGCCTTTCCAGGTGATCCGTGACACGATCAAGGAGATCGGGTA
CGACGACCCCGGGAAGGGCCTGGACTACAACACCATGAATGTGATCGTGG
CCATCGAAGAGCAATCCCCCGATATCGCCCAGTCGGTCGACTCCCGCACG
GGCAACGTGGAGGACATCGGCGCCGGCGACCAGGGAATCATGTTCGGGTG
GGTAAAAGAGGGAGGAAAGGGAAGAAGGGGAGAAAGGGTAATAAGTGACA
CGAATGTACTTTTAATCCATCATTATTGTTTTGTCTCCTCACACTATGTT
CTAAAGCGCGGTGTTCAACTGATCTTTTCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTAGCTATGCCACGGACGAGACGGAGGAGCTCATGCCTCTCACC
CACCTGCTGGCCACCTCCATCGGGGCCCGTCTGACAGAGGTGCGCAAGAC
AGGCGTGCTTGATTGGGTGCGCCCCGACGGCAAGACGCAAGTCACCGTTG
AGGTAGGTGGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGAGGGAGAGG
GAAGGAGGTATGGATGTGGGGTGGGGGAAGGAGGTAGAGGAGATGGCAAG
GAGGCAAGAAACGAGGCGACATATGATACGGTCGACTCACCTTTCTCCCT
CCCTCTCTCCCTCCCTTCCTCAGTACAAGGTGGAGGGCGGGAGGCCCGTG
CCTCAACGGGTCCACACGATCGTTATCTCGACGCAGCACTCGGAGGAGGT
GACGCTGGAGAAGATCCGCGAGGATTTGCTCGAGCACGTGATCAAGCCGG
TGGTGCCTGCCAAGTACCTGGACGACAAGACCATCTACCACCTGAACCCC
TCGGGGCGTTTCGTGATCGGTGGCCCACACGGGGACGCCGGCTTAACGGG
CAGGAAGATCATCATCGACACGTATGGCGGGTGGGGCGCCCATGGTGGCG
GTGCCTTCTCGGGCAAGGACACGACCAAAGTGGATCGCTCGGCGGCGTAC
GCGGCCCGTTGGGTGGCCAAGAGCCTCGTGGCGGCCAAACTGTGCCATCG
GGTGCTCGTGCAGTTGTCCTATGCCATTGGCGTGGCTCACCCCCTGTCGG
TGTTTGTCGATTCGTACGGCACGGGCAAGACGGCCTCAGGAAAGTCGGAC
TCGGAGCTGTGCAAAATCGTCGAGAAGAATTTCGACCTCCGCCCCGGGTA
TGTGCCCTCTTTGCTTTTGTGGCCCTGCCCTCTCCTTCCCTTCCCTCTCC
TTCCCTCCCTCCCTCCCTCCCTCCCTCCCGCCTCCCGCGTGACGTGCACC
TGGAACCCTATTATGAGCAAAACCACTGCGACATTCCACTCATCCTACTC
TCCTCCCTCTTCCCCACAGCTGCATCCAGCGCGACCTGAACCTGAAGCGC
CCCATCATGACCAAGACGGCGGCTTACGGACACTTCGGCCGAAACGACCC
GGATTTCACTTGGGAGCAGGTGAAGACTCTCAACATTTAAATTTGAGAGG
GCGGGAGGGAAGGAGGGACGGAAGGAGGGAGGGGTAGAGTGAGGGATGAT
GGGGTGGGTCTGAGTCACGTTTCCATCCTCGGGGTTCTTTCGAGGAAAGA
AGGGAGGGAGGGAAGGAGGGATGGATGGACAGAGGGAGGGATTGAGGATG
TCACTCTGGCAATTGTTTTTGCCTTGTTCGGCATGGTGGAATCAAGTAAT
AAGCGATTGGGAGTCGGTTTTCGTCGTGGTAGACGAGGGAGGGAGAGAGG
GAGGGAGGGACGAGGGGCCCCGTGTCGCATTCGTCGTTCGGAGTTTGAAG
GAGGGGGAGGGAGGGGCGGAGGGAGAGAAGGAGGAATAGATTAATGGAGA
CCTGCATGTGTCGAGTCTGCATATGTGTGTGTGCGTGTCCAGGTGGTGGT
GGTTGTGGTGTTTTTGGTGAGGAGAACGAGAAGCAGCTGGAGGAGGAGGA
GGAGTAGCAGCACCTTCATGTCGGTTTCGGAAAGTCCCTTGTTTTCCCTT
GGAATCCTCGCACCATAACCCTGCCACCAGCATCATCATCATCATCATAG
TATCAACCTAATCACTGTCGTCACCGCCGTCTTTGTCTTGTCCTTACTGA
TGCAGCCGTTGACCGCAATGGTGGTTTGATTGAGTCAATTTAATGTCATT
TTGGATCGTGATCCATGACTTGCAGATGCCGTCATCGACCTTGTCATGAA
TCAAACAGCAGCAGTAGGCACAGGAGCAGTGGCAGCAGCAGCAGCAGCGA
GGGGTATGAAGTATTGAGACAATGCGACCCGAAAAGAATTAATGACAGCT
GGCCCTTCAAGAGGCACGTACACAGATACATAAATATACACACGTATGTT
TATACACACACTCGTGCCTTCATACGTCCGTATAGACAAGCAACATCCAT
CTCTTAACGCTCTTTGACTGCTCTTTCGTCTTCGGGGACGACTATCCCCA
CCTTCGAGTGTGAGATGTCTTCAATTCTTTCTTGATATCGGGGTCTCTAA
TTACCCCTGGCCATGCCCCTCCTTCTCTCACCCACACCAGGTATGTCACA
CGTGCCGTTGTTTACGTATGTTGCAGCTTATTCTTTGATTCCCTCTGCCT
TCATACACCTCCGTTCTCCCTCCATGTAATGTTCCCCTTTTCTGTCTTTC
CGCCAAGCAAGCACGCAATTGCCTTCCCTTCCCCCCTCCCTCCCTCCCTC
CCTCCACCCC back to topCoding sequence (CDS) from alignment at chr8:230307..234416+ >NO08G00670.1 ID=NO08G00670.1|Name=NO08G00670.1|organism=Nannochloropsis oceanica|type=CDS|length=1182bp|location=Sequence derived from alignment at chr8:230307..234416+ (Nannochloropsis oceanica) ATGTCTCTGGAAGATGGCACCGAGTTCCTCTTCACTTCTGAATCCGTAAA CGAAGGCCACCCCGACAAAATCTGCGATCAGGTTTCTGATGCCATCTTGG ATGCCTGCGTCAAGGACGATGAGAACTCGCGCGTCGCCTGCGAGACCTGC ACCAAGACCGGCATGGTCATGATCTTCGGTGAGATCTCCACTGCTGCCAC CGTCAACTACGAGCAGGTGATCCGTGACACGATCAAGGAGATCGGGTACG ACGACCCCGGGAAGGGCCTGGACTACAACACCATGAATGTGATCGTGGCC ATCGAAGAGCAATCCCCCGATATCGCCCAGTCGGTCGACTCCCGCACGGG CAACGTGGAGGACATCGGCGCCGGCGACCAGGGAATCATGTTCGGCTATG CCACGGACGAGACGGAGGAGCTCATGCCTCTCACCCACCTGCTGGCCACC TCCATCGGGGCCCGTCTGACAGAGGTGCGCAAGACAGGCGTGCTTGATTG GGTGCGCCCCGACGGCAAGACGCAAGTCACCGTTGAGTACAAGGTGGAGG GCGGGAGGCCCGTGCCTCAACGGGTCCACACGATCGTTATCTCGACGCAG CACTCGGAGGAGGTGACGCTGGAGAAGATCCGCGAGGATTTGCTCGAGCA CGTGATCAAGCCGGTGGTGCCTGCCAAGTACCTGGACGACAAGACCATCT ACCACCTGAACCCCTCGGGGCGTTTCGTGATCGGTGGCCCACACGGGGAC GCCGGCTTAACGGGCAGGAAGATCATCATCGACACGTATGGCGGGTGGGG CGCCCATGGTGGCGGTGCCTTCTCGGGCAAGGACACGACCAAAGTGGATC GCTCGGCGGCGTACGCGGCCCGTTGGGTGGCCAAGAGCCTCGTGGCGGCC AAACTGTGCCATCGGGTGCTCGTGCAGTTGTCCTATGCCATTGGCGTGGC TCACCCCCTGTCGGTGTTTGTCGATTCGTACGGCACGGGCAAGACGGCCT CAGGAAAGTCGGACTCGGAGCTGTGCAAAATCGTCGAGAAGAATTTCGAC CTCCGCCCCGGCTGCATCCAGCGCGACCTGAACCTGAAGCGCCCCATCAT GACCAAGACGGCGGCTTACGGACACTTCGGCCGAAACGACCCGGATTTCA CTTGGGAGCAGGTGAAGACTCTCAACATTTAA back to top
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