NO08G00340, NO08G00340 (gene) Nannochloropsis oceanica

Overview
NameNO08G00340
Unique NameNO08G00340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2119
Alignment locationchr8:133773..135891 -

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Properties
Property NameValue
DescriptionAllantoicase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:133773..135891 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000256allantoin catabolic process
GO:0009987cellular process
GO:0009056catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004037allantoicase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like
IPR005164Allantoicase
IPR015908Allantoicase_dom
Homology
BLAST of NO08G00340 vs. NCBI_GenBank
Match: EWM26524.1 (allantoicase [Nannochloropsis gaditana] >EWM26525.1 allantoicase [Nannochloropsis gaditana])

HSP 1 Score: 620.9 bits (1600), Expect = 3.200e-174
Identity = 291/405 (71.85%), Postives = 332/405 (81.98%), Query Frame = 0
Query:   56 MADRPIILTGTAAPPDFVEETDLALGRFGAKVCFATDDWFAAAENMLNHEEPVFIAEKFTTCGKWMDGWETRRKRIAGHDWCIIKMAFPGRIMGIDVDTSHFTGNYVPRCSIQAATLNDNDEASGILQWLTVARARAPKGDKMGSKATEEELSHVERVGSEEWTTVLPFTTLGAGYKDTCHNYFNVTTKERFTHLRLNMFPDGGIARLRVYGEVARDWDMVPTSQLLDLAAAENGGKAVGCSDKHYGHPRNLINPGRGINMGDGWETARKLTRPPVLEPGEGGLIKVPGSDYAILRLGTLGKVEQLEIDTKWFKGNYPESCQVEGVRLSTLMTNREVLTAEGQGQIEWKVLLRRTKLGPDCQAWFEEGGDEGEEMEGGVGPVTHLKLTIYPDGGISRLRALGRRV 461
            MADRP+  + T A PDFVEETDLAL RFG ++CFATDDWFAAAEN+L+HEEP+FI +KFT  GKWMDGWETRRKR AGHDWCIIK+AFPGRI+G+ VDTS FTGNYVPRCSIQAA+  D++E    LQ L  AR   P GDK+GSKA+EEE++    V S+ W T+LPFT LGAGYKDTCHNYF +   ERFTHLRLNMFPDGGIARLRVYG VAR W +VP +Q++DLAA ENGGKA+GCSDKHYGHPRNLINPGRGINMGDGWETARKLTRPPVLEP EGGLIKVPGSD+A+LRLGT GKV +LEIDT WFKGNYPESCQVE V L   M+N +V  A+  G++ W++LL RTKLG D QA+F+ G + G    GG   VTHLKLTIYPDGGISR+RA G +V
Sbjct:    1 MADRPMQQSHTTALPDFVEETDLALSRFGGRICFATDDWFAAAENLLDHEEPIFIPDKFTAYGKWMDGWETRRKRTAGHDWCIIKLAFPGRILGVGVDTSFFTGNYVPRCSIQAASYIDDNEPIA-LQKLAAARTEVPGGDKIGSKASEEEMTLAASVHSDSWETILPFTPLGAGYKDTCHNYFAIEATERFTHLRLNMFPDGGIARLRVYGIVARAWHLVPATQVVDLAAVENGGKAIGCSDKHYGHPRNLINPGRGINMGDGWETARKLTRPPVLEPDEGGLIKVPGSDWAVLRLGTPGKVRELEIDTCWFKGNYPESCQVEAVELPLDMSNEDVHKAQELGEVPWRILLPRTKLGADQQAYFDVGAEGGRAEAGGA--VTHLKLTIYPDGGISRVRARGTKV 402          
BLAST of NO08G00340 vs. NCBI_GenBank
Match: XP_005855767.1 (allantoicase, partial [Nannochloropsis gaditana CCMP526] >EKU20594.1 allantoicase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 453.8 bits (1166), Expect = 6.700e-124
Identity = 208/277 (75.09%), Postives = 234/277 (84.48%), Query Frame = 0
Query:   56 MADRPIILTGTAAPPDFVEETDLALGRFGAKVCFATDDWFAAAENMLNHEEPVFIAEKFTTCGKWMDGWETRRKRIAGHDWCIIKMAFPGRIMGIDVDTSHFTGNYVPRCSIQAATLNDNDEASGILQWLTVARARAPKGDKMGSKATEEELSHVERVGSEEWTTVLPFTTLGAGYKDTCHNYFNVTTKERFTHLRLNMFPDGGIARLRVYGEVARDWDMVPTSQLLDLAAAENGGKAVGCSDKHYGHPRNLINPGRGINMGDGWETARKLTRPPVL 333
            MADRP+  + T A PDFVEETDLAL RFG ++CFATDDWFAAAEN+L+HEEP+FI +KFT  GKWMDGWETRRKR AGHDWCIIK+AFPGRI+G+ VDTS FTGNYVPRCSIQAA+  D++E    LQ L  AR   P GDK+GSKA+EEE++    V S+ W T+LPFT LGAGYKDTCHNYF +   ERFTHLRLNMFPDGGIARLRVYG VAR W +VP +Q++DLAA ENGGKA+GCSDKHYGHPRNLINPGRGINMGDGWETARKLTRPPVL
Sbjct:    1 MADRPMQQSHTTALPDFVEETDLALSRFGGRICFATDDWFAAAENLLDHEEPIFIPDKFTAYGKWMDGWETRRKRTAGHDWCIIKLAFPGRILGVGVDTSFFTGNYVPRCSIQAASYIDDNEPIA-LQKLAAARTEVPGGDKIGSKASEEEMTLAASVHSDSWETILPFTPLGAGYKDTCHNYFAIEATERFTHLRLNMFPDGGIARLRVYGIVARAWHLVPATQVVDLAAVENGGKAIGCSDKHYGHPRNLINPGRGINMGDGWETARKLTRPPVL 276          
BLAST of NO08G00340 vs. NCBI_GenBank
Match: XP_020372409.1 (probable allantoicase [Rhincodon typus])

HSP 1 Score: 406.8 bits (1044), Expect = 9.300e-110
Identity = 202/397 (50.88%), Postives = 259/397 (65.24%), Query Frame = 0
Query:   70 PDFVEETDLALGRFGAKVCFATDDWFAAAENMLNHEEPVFIAEKFTTCGKWMDGWETRRKRIAGHDWCIIKMAFPGRIMGIDVDTSHFTGNYVPRCSIQAATLNDNDEASGILQWLTVARARAPKGDKMGSKATEEELSHVERVGSEEWTTVLPFTTLGAGYKDTCHNYFNVTTKERFTHLRLNMFPDGGIARLRVYGEVARDWDMVPTSQLLDLAAAENGGKAVGCSDKHYGHPRNLINPGRGINMGDGWETARKLTRPPVLEPGEGGLIKVPGSDYAILRLGTLGKVEQLEIDTKWFKGNYPESCQVEGVRLSTLMTNREVLTA-EGQGQIEWKVLLRRTKLGPDCQAWFEEGGDEGEEMEGGVGPVTHLKLTIYPDGGISRLRALGRRVPENGG 466
            PDFV+  DLA    GAK+ FATDDWFAAAEN+L  E P + AE FT  GKWMDGWETRRKRI+GHDWCIIK+  PG I G DVDTS+FTGNY PR SI AA LN  DE   +           P+G+K+G+ A+E+E   V ++ SE WT ++P T L  GY DTCHNYF     ER+TH+RLNM+PDGGIARLRVYG   RDW  V   Q +DL A  NGG  +G SD H+GHP+N+I  GR   M DGWETAR+L RP +L+  + G+++VPG ++A+ RLG  G +  ++IDT  FKGN+P+SC++EG  ++       + T  +    ++WK++L  TKL P  Q  +        EM+     +TH++LTI PDGGISR+R LG   P   G
Sbjct:   14 PDFVQLNDLACETTGAKILFATDDWFAAAENLLKREAPQWKAEDFTNFGKWMDGWETRRKRISGHDWCIIKLGVPGIIHGFDVDTSYFTGNYAPRISIAAANLN-ADETPDL----------PPRGEKIGTAASEKEFEAVGKLQSEFWTVLVPMTILQPGYVDTCHNYFPAQKLERWTHIRLNMYPDGGIARLRVYGTGHRDWLSVSPKQEIDLVAMTNGGVCLGYSDAHFGHPKNIIGIGRSNVMSDGWETARRLDRPTILKVDDQGILQVPGCEWAVFRLGHPGVITHIDIDTSHFKGNFPDSCKIEGCSITAEEEKERIATKWKDCCGLKWKLVLPVTKLKPHQQHSY------STEMK---DTLTHVRLTIKPDGGISRMRLLGYPCPLPSG 390          
BLAST of NO08G00340 vs. NCBI_GenBank
Match: XP_009529900.1 (hypothetical protein PHYSODRAFT_545642 [Phytophthora sojae] >EGZ16151.1 hypothetical protein PHYSODRAFT_545642 [Phytophthora sojae])

HSP 1 Score: 404.8 bits (1039), Expect = 3.600e-109
Identity = 206/398 (51.76%), Postives = 263/398 (66.08%), Query Frame = 0
Query:   66 TAAPPDFVEE-TDLALGRFGAKVCFATDDWFAAAENMLNHEEPVFIAEKFTTCGKWMDGWETRRKRIAGHDWCIIKMAFPGRIMGIDVDTSHFTGNYVPRCSIQAATLNDNDEASGILQWLTVARARAPKGDKMGSKATEEELSHVERVGSEEWTTVLPFTTLGAGYKDTCHNYFNVTTKER--FTHLRLNMFPDGGIARLRVYGEVARDWDMVPTSQLLDLAAAENGGKAVGCSDKHYGHPRNLINPGRGINMGDGWETARKLTRPPVLEPG-EGGLIKVPGSDYAILRLGTLGKVEQLEIDTKWFKGNYPESCQVEGVRLSTLMTNREVLTAEGQGQIEWKVLLRRTKLGPDCQAWFEEGGDEGEEMEGGVGPVTHLKLTIYPDGGISRLRALGRR 460
            T   PD VE  TDLA   +G++V FATD+WFA A ++L  E PVFIA+KFT+ GKWMDGWETRRKRIAGHDWC++ +   G +  +DVDT+ FTGN  PR SIQAA  +   EA      L +  ARA +   MG  A+ EEL   E++ S +WT ++P T LGAGY +T HN   V   +R  +THLR+NMFPDGGIARLR YGEV  DW  V +SQLLDL + E+GG+ VG +D HYGHPRNL+ PGR   M DGWETARK TRP +L+   + GL++VPG D+ +L+LG LG V+Q+E+DT  FKGN+PESC V G R        + L  +  G ++W+VLL R KL    Q +F   G     + GG   V ++KL ++PDGGISRLR  G +
Sbjct:    2 TRPTPDEVETLTDLASAAYGSRVLFATDEWFAPASDLLRPEPPVFIADKFTSFGKWMDGWETRRKRIAGHDWCVLALGLRGAVDVVDVDTAFFTGNNAPRVSIQAADFSQQSEA------LRILSARATEQRAMGVCASAEELKLAEQLQSHQWTEIVPPTELGAGYAETRHNLLRVPPSKRGPWTHLRVNMFPDGGIARLRAYGEVVMDWSRVSSSQLLDLVSVEHGGQVVGFNDAHYGHPRNLMAPGRSKTMADGWETARKATRPAILKADPKTGLLEVPGKDWVVLKLGHLGVVQQVEVDTNHFKGNFPESCVVYGTRFE---GEEDKLLKD--GAVKWEVLLPRVKLEAHKQHYFSVTGGNVNLIPGG---VNYIKLEMFPDGGISRLRLRGHK 385          
BLAST of NO08G00340 vs. NCBI_GenBank
Match: CBJ29193.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 399.8 bits (1026), Expect = 1.100e-107
Identity = 197/394 (50.00%), Postives = 257/394 (65.23%), Query Frame = 0
Query:   70 PDFVEETDLALGRFGAKVCFATDDWFAAAENMLNHEEPVFIAEKFTTCGKWMDGWETRRKRIAGHDWCIIKMAFPGRIMGIDVDTSHFTGNYVPRCSIQAATLNDNDEASGILQWLTVARARAPKGDKMGSKATEEELSHVERVGSEEWTTVLPFTTLGAGYKDTCHNYFNVTTKERFTHLRLNMFPDGGIARLRVYGEVARDWDMVPTSQLLDLAAAENGGKAVGCSDKHYGHPRNLINPGRGINMGDGWETARKLTRPPVLEPGEGGLIKVPGSDYAILRLGTLGKVEQLEIDTKWFKGNYPESCQVEGVRLSTLMTNREVLTAEGQGQIEWKVLLRRTKLGPDCQAWFEEGGDEGEEMEGGVGPVTHLKLTIYPDGGISRLRALGRRVPEN 464
            P++   T+LA   FG  V FATD+WF  A  +L   EP+F  ++FT  GKWMDGWE+RRKR+AGHDWCIIK+  PGRI G+ VDT+ FTGN  PR S+Q A L    EA   L        RA   D++GS A  +E++    +GSE+W  V+  T L  GY+D   +YF++ +  ++THLRLNMFPDGGIARL+V+G V R WD VP    +DL + ENGG  V CS+ HYG P+N+I PGRGINMGDGWETARK  RP VLE G  GL+K PGSD+AILRLG +G+V++L +DT  FKGN+PES  VE       + +     A+G  ++ W+ LL R K G   +  F+ G  E E +    GP++H+KL++ PDGG+ RLRA G R P +
Sbjct:    6 PEWTNMTNLASATFGGTVDFATDEWFGEAARLLLPGEPIF-NDEFTEFGKWMDGWESRRKRVAGHDWCIIKLGLPGRIRGVKVDTAFFTGNQAPRFSLQGAWLPQEPEALTQL-------GRAWTKDRLGSAAGADEMARAASLGSEQWEEVVGTTPLRPGYEDGRCHYFDIISDRKYTHLRLNMFPDGGIARLKVHGIVERSWDGVPHDAEIDLLSVENGGVEVACSNHHYGEPKNMIKPGRGINMGDGWETARKTDRPTVLEIGPDGLVKAPGSDWAILRLGVIGEVKRLVVDTNHFKGNFPESILVEACLSPDALDSD---FADGGERMRWRPLLPRHKAGSSREHVFDLGKGEIENL----GPISHVKLSMMPDGGVMRLRAFGTRAPSS 384          
BLAST of NO08G00340 vs. NCBI_GenBank
Match: XP_012198268.1 (allantoicase [Saprolegnia parasitica CBS 223.65] >KDO31140.1 allantoicase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 399.8 bits (1026), Expect = 1.100e-107
Identity = 197/394 (50.00%), Postives = 262/394 (66.50%), Query Frame = 0
Query:   68 APPDFVEETDLALGRFGAKVCFATDDWFAAAENMLNHEEPVFIAEKFTTCGKWMDGWETRRKRIAGHDWCIIKMAFPGRIMGIDVDTSHFTGNYVPRCSIQAATLNDNDEASGILQWLTVARARAPKGDKMGSKATEEELSHVERVGSEEWTTVLPFTTLGAGYKDTCHNYFNVTTKERFTHLRLNMFPDGGIARLRVYGEVARDWDMVPTSQLLDLAAAENGGKAVGCSDKHYGHPRNLINPGRGINMGDGWETARKLTRPPVLEPGEGGLIKVPGSDYAILRLGTLGKVEQLEIDTKWFKGNYPESCQVEGVRLSTLMTNREVLTAEGQGQIEWKVLLRRTKLGPDCQAWFEEGGDEGEEMEGGVGPVTHLKLTIYPDGGISRLRALGRRVP 462
            +PP F + T L+      +V FATD+WFAAA+N+L+   PVFIA+KFT  GKWMDGWETRRKRIAGHDWC++++   G+I+GI+VDT+ FTGN  PR SIQAA L     A        + R R     +MG+ A+  E + +  +G++ W  ++P T L  GY+ + ++YFNV + + +THLR+NMFPDGGIARL+VYG VA DWD +  +  +DL AA NGG  VG SD HYGHPRNL+ PGRG+NMGDGWETARK TRP +L     GL+ VPG D+ +L+LG +G VE++E+DT  FKGN+PESC +EG           VL+A     + W+ +L RTKL  D Q +F    D    +E G   + +++ T+YPDGGISRLR  GR+ P
Sbjct:    2 SPPPFTQLTCLST---RGRVLFATDEWFAAADNLLSPAPPVFIADKFTNYGKWMDGWETRRKRIAGHDWCVLELGLRGKIVGIEVDTAFFTGNNAPRVSIQAACLEPGVGAD-------LVRPR-----EMGTCASATEEAAIGALGTDAWRELVPRTELQPGYEASRYHYFNVNSDDVWTHLRVNMFPDGGIARLKVYGVVAVDWDKIAPTASVDLVAAANGGTVVGFSDAHYGHPRNLLQPGRGVNMGDGWETARKKTRPAILTVDARGLLTVPGDDWVVLKLGHVGIVERIEVDTAHFKGNFPESCFIEG----CFYEGNNVLSA----SVTWRPVLPRTKLSADKQHFF---SDAERSLEPGRDAINYVRFTMYPDGGISRLRVWGRKAP 369          
BLAST of NO08G00340 vs. NCBI_GenBank
Match: OQR90848.1 (allantoicase [Thraustotheca clavata])

HSP 1 Score: 399.4 bits (1025), Expect = 1.500e-107
Identity = 200/377 (53.05%), Postives = 253/377 (67.11%), Query Frame = 0
Query:   87 VCFATDDWFAAAENMLNHEEPVFIAEKFTTCGKWMDGWETRRKRIAGHDWCIIKMAFPGRIMGIDVDTSHFTGNYVPRCSIQAATLNDNDEASGILQWLTVARARAPKGDKMGSKATEEELSHVERVGSEEWTTVLPFTTLGAGYKDTCHNYFNVTTKERFTHLRLNMFPDGGIARLRVYGEVARDWDMVPTSQLLDLAAAENGGKAVGCSDKHYGHPRNLINPGRGINMGDGWETARKLTRPPVLEPGEGGLIKVPGSDYAILRLGTLGKVEQLEIDTKWFKGNYPESCQVEG----VRLSTLMTNREVLTAEGQGQIEWKVLLRRTKLGPDCQAWFEEGGDEGEEMEGGVGPVTHLKLTIYPDGGISRLRALGRR 460
            V FATD+WFA+A+N+L    PVFI EKFT  GKWMDGWETRRKRI GHDWC+IK+   G+I GID+DT+ FTGN  PR SIQAA L +     G  Q LT  R       +MG+ A+  E   +E++GSE W  +LP T L  GY+++ H+YF +   + +THLR+N+FPDGGIARL+VYG V+ DWD VP    +DL AA NGG  +  SD H+G P+NL+ PGRGINMGDGWETARK TRP +L   E GL+ VPG D+ I++LG +G ++++EIDT  FKGNYPESC +EG     + STL             Q +W+ LL RTKLGPD Q +F  G D+    E     + H++LTIYPDGGISRLR  GR+
Sbjct:   18 VLFATDEWFASADNLLLTSPPVFIPEKFTDFGKWMDGWETRRKRIPGHDWCVIKLGLRGKIAGIDIDTAFFTGNNAPRVSIQAACLPE-----GKGQELTRER-------QMGTCASSSESEAIEKLGSESWHEILPRTELNPGYEESRHHYFEIANDQVWTHLRVNIFPDGGIARLKVYGIVSVDWDKVPADASVDLVAAANGGTIITYSDAHFGEPKNLLMPGRGINMGDGWETARKKTRPAILTADEKGLLTVPGKDWVIIQLGHIGIIDRIEIDTHHFKGNYPESCFIEGRFHQGQASTL-----------NEQTQWRPLLPRTKLGPDAQHYF--GKDQLVPGEA----INHVRLTIYPDGGISRLRIWGRK 365          
BLAST of NO08G00340 vs. NCBI_GenBank
Match: AAP41914.1 (allantoicase [Branchiostoma belcheri tsingtauense])

HSP 1 Score: 399.1 bits (1024), Expect = 1.900e-107
Identity = 192/398 (48.24%), Postives = 262/398 (65.83%), Query Frame = 0
Query:   64 TGTAAPPDFVEETDLALGRFGAKVCFATDDWFAAAENMLNHEEPVFIAEKFTTCGKWMDGWETRRKRIAGHDWCIIKMAFPGRIMGIDVDTSHFTGNYVPRCSIQAATLNDNDEASGILQWLTVARARAPKGDKMGSKATEEELSHVERVGSEEWTTVLPFTTLGAGYKDTCHNYFNVTTKERFTHLRLNMFPDGGIARLRVYGEVARDWDMVPTSQLLDLAAAENGGKAVGCSDKHYGHPRNLINPGRGINMGDGWETARKLTRPPVLEPGEGGLIKVPGSDYAILRLGTLGKVEQLEIDTKWFKGNYPESCQVEGVRLSTLMTNREVL----TAEGQGQIEWKVLLRRTKLGPDCQAWFEEGGDEGEEMEGGVGPVTHLKLTIYPDGGISRLRALG 458
            T +  PP F +  DLA  + G +V FATDDWFA A+N+L  + P +    FT  GKWMDGWE+RRKR+ GHDWCI+++   G I G++VDTS+FTGNY PR S+QAA L D           T    R P   +MG+ A+ ++L+ +E + +EEWT ++P T L  GY DTC NYF++T+ +R+TH+RLNM+PDGGIARL VYG  ++DW  V +++L+DL A +NGG  +G S+ HYGHPRN I  GR  NMGDGWETAR+L RPP+L+  E G++ VPG ++A+ RLG  G + ++EIDT  FKGNYP+SC++E   LS     + VL     A G  +++WK LL  TKL    + +   G  +       VG V+H++LT+ PDGGISR+R  G
Sbjct:    5 TTSTTPPHFTQLNDLACAKAGGRVLFATDDWFAVADNLLKGDPPQWKEGVFTEYGKWMDGWESRRKRMEGHDWCIVQLGVSGVISGVEVDTSYFTGNYAPRFSLQAACLPDG----------TTFPVRQP---RMGTAASPQQLAGMEEIKTEEWTELVPMTALRPGYPDTCQNYFHITSTQRWTHVRLNMYPDGGIARLHVYGIGSKDWSTVKSNELVDLVAMDNGGVCLGFSNAHYGHPRNAIGLGRADNMGDGWETARRLDRPPILKADESGVLVVPGCEWAVYRLGHPGVILKIEIDTNHFKGNYPDSCRIEACTLSP-TEEKAVLGRDRAAIGNEEVKWKTLLGPTKLSAHRRLFLSGGQVQ------PVGVVSHVRLTMTPDGGISRMRLWG 382          
BLAST of NO08G00340 vs. NCBI_GenBank
Match: CCT61360.1 (allantoicase [Latimeria menadoensis])

HSP 1 Score: 397.5 bits (1020), Expect = 5.700e-107
Identity = 195/389 (50.13%), Postives = 255/389 (65.55%), Query Frame = 0
Query:   70 PDFVEETDLALGRFGAKVCFATDDWFAAAENMLNHEEPVFIAEKFTTCGKWMDGWETRRKRIAGHDWCIIKMAFPGRIMGIDVDTSHFTGNYVPRCSIQAATLNDNDEASGILQWLTVARARAPKGDKMGSKATEEELSHVERVGSEEWTTVLPFTTLGAGYKDTCHNYFNVTTKERFTHLRLNMFPDGGIARLRVYGEVARDWDMVPTSQLLDLAAAENGGKAVGCSDKHYGHPRNLINPGRGINMGDGWETARKLTRPPVLEPGEGGLIKVPGSDYAILRLGTLGKVEQLEIDTKWFKGNYPESCQVEGVRLSTLMTNREVLTAEGQGQ-IEWKVLLRRTKLGPDCQAWFEEGGDEGEEMEGGVGPVTHLKLTIYPDGGISRLRALG 458
            P F +  DLA    G  V FATDDWFA AEN+L  EEP F AE FT  GKWMDGWETRRKRI GHDWCII +  PG I G DVDT+ FTGNYVP  SIQAA L    E + ++ +         +GD++G+ A+EEEL  V+++ S+ WT ++P T L  GY D  HNYF+V +++R+TH+RLN++PDGGIARL+VYG   RDW  V  ++ +DLAA  NGG  VG SD H+GHPRN++  GRG NMGDGWETAR L RPP+L+  E G++ V G ++A+ RL   G +  +EIDT  FKGN+P+SC+++ + LS+    +  +      Q ++WK LL   KL    + +F     E  E+      VTH++LTI PDGGISR+R  G
Sbjct:   14 PSFTQLNDLASETAGGTVIFATDDWFAPAENLLKREEPDFKAEAFTEFGKWMDGWETRRKRIPGHDWCIILLGVPGVIHGFDVDTAFFTGNYVPHISIQAACL--EQEENPLIHF---------RGDRIGTAASEEELEAVKKLKSDSWTILVPMTELKPGYIDCSHNYFSVNSQQRWTHIRLNVYPDGGIARLKVYGVGQRDWSRVSLNEAVDLAAIINGGVCVGFSDAHFGHPRNILGLGRGKNMGDGWETARHLDRPPILKADEKGVLMVSGCEWAVFRLAHPGVITHIEIDTNHFKGNFPDSCKIDVLALSSQEEKQGKIEKWNDNQSLKWKTLLPINKLKAHQRHFFSSNSIETTEV------VTHVRLTIAPDGGISRMRLWG 385          
BLAST of NO08G00340 vs. NCBI_GenBank
Match: XP_006006609.1 (PREDICTED: probable allantoicase isoform X1 [Latimeria chalumnae])

HSP 1 Score: 397.5 bits (1020), Expect = 5.700e-107
Identity = 195/389 (50.13%), Postives = 255/389 (65.55%), Query Frame = 0
Query:   70 PDFVEETDLALGRFGAKVCFATDDWFAAAENMLNHEEPVFIAEKFTTCGKWMDGWETRRKRIAGHDWCIIKMAFPGRIMGIDVDTSHFTGNYVPRCSIQAATLNDNDEASGILQWLTVARARAPKGDKMGSKATEEELSHVERVGSEEWTTVLPFTTLGAGYKDTCHNYFNVTTKERFTHLRLNMFPDGGIARLRVYGEVARDWDMVPTSQLLDLAAAENGGKAVGCSDKHYGHPRNLINPGRGINMGDGWETARKLTRPPVLEPGEGGLIKVPGSDYAILRLGTLGKVEQLEIDTKWFKGNYPESCQVEGVRLSTLMTNREVLTAEGQGQ-IEWKVLLRRTKLGPDCQAWFEEGGDEGEEMEGGVGPVTHLKLTIYPDGGISRLRALG 458
            P F +  DLA    G  V FATDDWFA AEN+L  EEP F AE FT  GKWMDGWETRRKRI GHDWCII +  PG I G DVDT+ FTGNYVP  SIQAA L    E + ++ +         +GD++G+ A+EEEL  V+++ S+ WT ++P T L  GY D  HNYF+V +++R+TH+RLN++PDGGIARL+VYG   RDW  V  ++ +DLAA  NGG  VG SD H+GHPRN++  GRG NMGDGWETAR L RPP+L+  E G++ V G ++A+ RL   G +  +EIDT  FKGN+P+SC+++ + LS+    +  +      Q ++WK LL   KL    + +F     E  E+      VTH++LTI PDGGISR+R  G
Sbjct:   14 PSFTQLNDLASETAGGTVIFATDDWFAPAENLLKREEPDFKAEAFTEFGKWMDGWETRRKRIPGHDWCIILLGVPGVIHGFDVDTAFFTGNYVPHISIQAACL--EQEENTLIHF---------RGDRIGTAASEEELEAVKKLKSDSWTILVPMTELKPGYIDCSHNYFSVNSQQRWTHIRLNVYPDGGIARLKVYGVGQRDWSRVSLNEAVDLAAIINGGVCVGFSDAHFGHPRNILGLGRGKNMGDGWETARHLDRPPILKADEKGVLMVSGCEWAVFRLAHPGVITHIEIDTNHFKGNFPDSCKIDVLALSSQEEKQGKIEKWNDNQSLKWKTLLPINKLKAHQRHFFSSNSIETTEV------VTHVRLTIAPDGGISRMRLWG 385          
The following BLAST results are available for this feature:
BLAST of NO08G00340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26524.13.200e-17471.85allantoicase [Nannochloropsis gaditana] >EWM26525.... [more]
XP_005855767.16.700e-12475.09allantoicase, partial [Nannochloropsis gaditana CC... [more]
XP_020372409.19.300e-11050.88probable allantoicase [Rhincodon typus][more]
XP_009529900.13.600e-10951.76hypothetical protein PHYSODRAFT_545642 [Phytophtho... [more]
CBJ29193.11.100e-10750.00conserved unknown protein [Ectocarpus siliculosus][more]
XP_012198268.11.100e-10750.00allantoicase [Saprolegnia parasitica CBS 223.65] >... [more]
OQR90848.11.500e-10753.05allantoicase [Thraustotheca clavata][more]
AAP41914.11.900e-10748.24allantoicase [Branchiostoma belcheri tsingtauense][more]
CCT61360.15.700e-10750.13allantoicase [Latimeria menadoensis][more]
XP_006006609.15.700e-10750.13PREDICTED: probable allantoicase isoform X1 [Latim... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL107nonsL107Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR138ngnoR138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G00340.1NO08G00340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|552698gene_3357Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G00340.1NO08G00340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G00340 ID=NO08G00340|Name=NO08G00340|organism=Nannochloropsis oceanica|type=gene|length=2119bp
ATGAGTGACAGAGGCTTTAATATATGTATGAGTGTGCACCTCGACATCTC
GAAGGAGTACAGCAAGGAGGAGGAGGAGGACGAGGAGGAGCCGGCGGTAA
CCTTAATGGTGGTGATTGCGGATAGTCACAGTAAATgtatgcatttcatt
taagttcttcagccatcgacctccccaacccccaaaccgcaggattattt
attagaattggggcattgcgttgttttccttcttcagtgtgtgatactac
gatgacaatgatatggaaacatgcttagaaagaccggcgttatctggcga
cagtctagcgctatcgcgtctctattccagtccttccttgtctcccatgc
agtcagtcacccccccatgtcacatcccgtactctcccattccacagGCA
TTTCCACCGCCCTCCTTCAAACCACCATGGCCGATCGCCCCATCATACTC
ACCGGCACAGCTGCGCCGCCTGATTTTGTGGAAGAGACGGATTTGGCCTT
GGGACGGTTTGGTGCTAAGGTGTGTTTTGCGACCGACGACTGGTTCGCCG
CGGCGGAAAACATGCTTAATCATGAAGAGCCTGTGTTTATCGCAGAGAAA
TTCACGACCTGCGGCAAGTGGATGGACGGGTGGGAGACTCGGCGGAAGCG
TATTGCAGGCCATGATTGGTGCATTATTAAGATGGCATTCCCGGGGCGCA
TTATGGGGATCGATGTGGATACGTCCCATTTTACAGGGAATTACGTCCCG
CGCTGCTCCATCCAAGCCGCCACCCTTAATGACAATGACGAGGCTTCTGG
CATTCTGCAATGGCTTACTGTGGCTCGGGCACGGGCGCCGAAGGGGGATA
AAATGGGGAGCAAGGCCACGGAAGAGGAGCTGTCGCATGTGGAGCGGGTT
GGGTCAGAGGAGTGGACAACAGTGCTGCCTTTCACAACCCTTGGTGCTGG
CTACAAGGATACGTGCCATAACTACTTTAATGTAACGACAAAAGAGCGGT
TTACGCACTTGAGGCTGAACATGTTTCCAGATGGGGGCATAGCGCGGTTG
AGGGTGTACGGGGAGGTGGCAAGAGATTGGGATATGGTGCCCACGTCACA
GCTCCTTGACTTGGCAGCGGCGGAGAATGGAGGGAAGGCCGTGGGGTGCA
GTGATAAACATTATGGCCACCCACGGAATTTGATAAACCCCGGGAGGGGT
ATCAACATGGGAGATGGGTGGGAAACGGCACGAAAGCTGACAAGGCCGCC
GGTGTTGGAGCCGGGGGAGGGAGGGTTGATTAAGGTACCTGGAAGTGATT
ATGCGATTTTGCGGCTCGGAACGCTGGGGAAGGTTGAGCAGTTGGAAATT
GATACGAAATGGTTCAAGGGAAATTATCCTGAAAGCTGTCAGGTGGAGGG
GGTGAGGTTGTCGACCTTGATGACAAATAGAGAGGTCTTGACGGCGGAGG
GACAGGGACAGATTGAGTGGAAGGTGCTGCTAAGGCGGACGAAGCTTGGG
CCGGACTGCCAGGCGTGGTTCGAGGAGGGGGGCGATGAGGGGGAGGAGAT
GGAGGGGGGGGTAGGGCCGGTTACTCATTTGAAGCTAACCATATACCCGG
ATGGAGGCATTTCACGGTTGCGCGCATTGGGGAGGCGGGTGCCAGAAAAC
GGAGgtaggcgagaggtggaggtggcgcggttgtgaggcaggggaggggg
attgcatgacgaatgtatgtatgatatgtatatgaacgcgagtatggtgc
ttgactagaaaggcttattggtgtgcgggtatctgtctttgaattatacg
agaaggcgtgacgtagtagactgacattttgacgctctcctccaacctat
ttaatatgtgcagGTCACTAGGCGGTGGGTGCCAGGCTGAGTCGTGGAGA
AATGATGCATTGAGGAAAGTTGATTAGGAACACGATAAGACACTTGTAAA
GCACACAGGGAAGGCGATTAGAGGTCTAGGCCGCTGTGAGAGAGAAAGAG
GCAGTTGGCCTCAAAGTGCTGTCGTGTGTGCAGATTTGCGTCCTTGAGAA
GATGAGGATAAAGAGGATGACGTAGGAAACAGAACTTACATAATTGAAAG
AAAGCCAGTGAATGTCATT
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protein sequence of NO08G00340.1

>NO08G00340.1-protein ID=NO08G00340.1-protein|Name=NO08G00340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=467bp
MSDRGFNICMSVHLDISKEYSKEEEEDEEEPAVTLMVVIADSHSKCISTA
LLQTTMADRPIILTGTAAPPDFVEETDLALGRFGAKVCFATDDWFAAAEN
MLNHEEPVFIAEKFTTCGKWMDGWETRRKRIAGHDWCIIKMAFPGRIMGI
DVDTSHFTGNYVPRCSIQAATLNDNDEASGILQWLTVARARAPKGDKMGS
KATEEELSHVERVGSEEWTTVLPFTTLGAGYKDTCHNYFNVTTKERFTHL
RLNMFPDGGIARLRVYGEVARDWDMVPTSQLLDLAAAENGGKAVGCSDKH
YGHPRNLINPGRGINMGDGWETARKLTRPPVLEPGEGGLIKVPGSDYAIL
RLGTLGKVEQLEIDTKWFKGNYPESCQVEGVRLSTLMTNREVLTAEGQGQ
IEWKVLLRRTKLGPDCQAWFEEGGDEGEEMEGGVGPVTHLKLTIYPDGGI
SRLRALGRRVPENGGH*
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Synonyms
Publications