NO08G00210, NO08G00210 (gene) Nannochloropsis oceanica

Overview
NameNO08G00210
Unique NameNO08G00210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2130
Alignment locationchr8:82773..84902 +

Link to JBrowse

Properties
Property NameValue
DescriptionAscorbate peroxidase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:82773..84902 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006979response to oxidative stress
GO:0042221response to chemical
GO:0009987cellular process
GO:0008152metabolic process
GO:0006950response to stress
Vocabulary: Molecular Function
TermDefinition
GO:0004601peroxidase activity
GO:0020037heme binding
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR010255Haem_peroxidase
IPR002016Haem_peroxidase_pln/fun/bac
IPR002207Asc_peroxidase
Homology
BLAST of NO08G00210 vs. NCBI_GenBank
Match: EWM26506.1 (ascorbate peroxidase [Nannochloropsis gaditana])

HSP 1 Score: 276.2 bits (705), Expect = 1.500e-70
Identity = 136/171 (79.53%), Postives = 150/171 (87.72%), Query Frame = 0
Query:  197 IPVQLGRTDSGQPNVNNVGDPGYSWASMTGEGLKNTFTKAGLGPREATLLYGAVGAVHLATKDAGQSAGEVDADIDDDGEIEAFIPTTFGKQSDIYGAQLGTKKFDASYLALVGKGQAVGLGTIDKVLATDPQLKTFVTKYAGNNNAFLKDLNECYLKLTTLGYKGTKRND 368
            +P+   RTDSG PN NNVG  GY+W SM+G+GL  TFTKAG G REA LLYGA+GAV+LATKDAG++AGEVDADIDDDGEIEAFIP TFGKQSDIYGAQLG +KFDASYLA + KGQ VGLG++DK LA DPQLKTFV KYAGNNNAFLKDLNECYLKLTTLGY+GTKRND
Sbjct:    1 MPLPSLRTDSGAPNKNNVGASGYAWNSMSGDGLLQTFTKAGFGAREAVLLYGAMGAVYLATKDAGKTAGEVDADIDDDGEIEAFIPNTFGKQSDIYGAQLGNRKFDASYLAQIAKGQTVGLGSVDKALA-DPQLKTFVGKYAGNNNAFLKDLNECYLKLTTLGYQGTKRND 170          
BLAST of NO08G00210 vs. NCBI_GenBank
Match: EWM26509.1 (l-ascorbate peroxidase [Nannochloropsis gaditana])

HSP 1 Score: 253.4 bits (646), Expect = 1.000e-63
Identity = 147/211 (69.67%), Postives = 161/211 (76.30%), Query Frame = 0
Query:    1 MKTHQLR--PCLLLAALVALSTTTGISAFVLPCSSKS------GSSRAGLRMAASSNNYDRRSLFVKSAAMSSLLALSLSSARPAAASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLTLAVPFVRLAINDAIGYDAATDGGGPDGSITFEMDRAQNEGLKPALAVLTKVKGEMQSTNEVTFGDICAFAGAVAIESTGGPRIPVQLGR 204
            MK HQLR    L  A L+ L + TGI+AF LP S  +         +  + M  +S++ DRRSL    A +SS  ALSLSS  PA ASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDL+LAV FVRLAIND IGYDAAT+ GGPDGSI FEMDR QN GLKPAL  L KVK E+QSTNEVTFGD+CAFAGAVAIESTGGPRIPVQLGR
Sbjct:    4 MKQHQLRHHHVLRAACLLLLVSITGIAAFKLPYSHSNFVQNHMQGRKGRVFMNQASDDCDRRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214          
BLAST of NO08G00210 vs. NCBI_GenBank
Match: CBN74988.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 228.0 bits (580), Expect = 4.700e-56
Identity = 138/317 (43.53%), Postives = 184/317 (58.04%), Query Frame = 0
Query:   54 RSLFVKSAAMSSLLALSLS-SARPAAASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLTLAVPFVRLAINDAIGYDAATDGGGPDGSITFEMDRAQNEGLKPALAVLTKVKGEMQSTNEVTFGDICAFAGAVAIESTGGPRIPVQLGRTDSGQPNVNNVGDPGYSWASMTGEGLKNTFTKAGLGPREATLLYGAVGAVHLATKDAGQSAGEVDADIDDDGEIEAFIPTTFGKQSDIYGAQLGTKKFDASYL---ALVGKGQAVGLGTIDKVLATDPQLKTFVTKYAGNNNAFLKDLNECYLKLTTLGYKGTKRN 367
            R  F+ S A S  L L+L+ S   A ASV F+ +RYGDKELKIATVNKL+Q++RN++  D  LA   ++LAI DA+G+DA+T  GGPDGS+  E+DR   + LKPA+    K+K  +Q TNE+T  D+ +  GA AI + GGP + VQLGR D  +         GYS+   TG G+K  F +AGLGPRE  LL GA+G+                         +  IP TFGK+SD  G  L +  F   +L   A  GK    G+G + K L  D ++KT+V KYAGN+ AF+ DL+E Y K+T LG +   RN
Sbjct:   64 RGEFISSVAASFGLGLALAVSPEAAQASVNFETERYGDKELKIATVNKLRQQIRNSLLEDPKLAPEMLKLAIADALGFDASTQTGGPDGSVVLELDREVAKSLKPAVDNAFKIKKNLQRTNEMTLADVISMGGAEAIHACGGPPMLVQLGRYDEKKAPNPAADIKGYSFDEPTGAGVKAAFKRAGLGPREMVLLLGALGSXXXXXXXXXXXXXXXXXXXXXXLAWQNSIPNTFGKESDKLGRPL-SNSFGPGFLQRVAAAGK-DGGGIGVVGKALLEDDEVKTYVRKYAGNSKAFMSDLSEAYTKMTLLGERYETRN 378          
BLAST of NO08G00210 vs. NCBI_GenBank
Match: XP_005853840.1 (ascorbate peroxidase [Nannochloropsis gaditana CCMP526] >EKU22519.1 ascorbate peroxidase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 206.8 bits (525), Expect = 1.100e-49
Identity = 101/118 (85.59%), Postives = 110/118 (93.22%), Query Frame = 0
Query:  250 VGAVHLATKDAGQSAGEVDADIDDDGEIEAFIPTTFGKQSDIYGAQLGTKKFDASYLALVGKGQAVGLGTIDKVLATDPQLKTFVTKYAGNNNAFLKDLNECYLKLTTLGYKGTKRND 368
            +GAV+LATKDAG++AGEVDADIDDDGEIEAFIP TFGKQSDIYGAQLG +KFDASYLA + KGQ VGLG++DK LA DPQLKTFV KYAGNNNAFLKDLNECYLKLTTLGY+GTKRND
Sbjct:    1 MGAVYLATKDAGKTAGEVDADIDDDGEIEAFIPNTFGKQSDIYGAQLGNRKFDASYLAQIAKGQTVGLGSVDKALA-DPQLKTFVGKYAGNNNAFLKDLNECYLKLTTLGYQGTKRND 117          
BLAST of NO08G00210 vs. NCBI_GenBank
Match: XP_005831559.1 (hypothetical protein GUITHDRAFT_152902 [Guillardia theta CCMP2712] >EKX44579.1 hypothetical protein GUITHDRAFT_152902 [Guillardia theta CCMP2712])

HSP 1 Score: 184.1 bits (466), Expect = 7.800e-43
Identity = 139/394 (35.28%), Postives = 202/394 (51.27%), Query Frame = 0
Query:   10 LLLAALVALSTTTGISAFVLPCSSKSGS---------SRAGLRMAASSNNYDRRSLFVKSAAMSSLLALSLSSARPAAASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLTLAVPFVRLAINDAIGYDAATDGGGPDGSITFEMDRAQNEGLKPALAVLTKVKGEMQSTNEVTFGDICAFAGAVAIESTGGPRIPVQLGRTDSGQPNVNNVGDPGYSWASMTGEGLKNTFTKAGLGPREATLLYGAVGAVHLATKDAGQS-AGEVDADIDD-------DGEIEAFIPTTF-GKQSDIYGAQLGTKK------FDASYLA-LVGKGQAVGLGTID-----------KVLATDPQLKTFVTKYA--GNNNAFLKDLNECYLKLTTLGYKGTKR 366
            + LA L   ST   ++    PC S   S         +R  LRM+  S++ + R  F+KSA     L L+L+  + A A V FD +RYGDKELK++T+NK+KQ+ R        L VP  RLA+ DA+ +DA T   GPDGS+   +    +E LK A   + ++K E+    ++T  DI AFAGAVAIE+TGGPR  VQLGR D G+P+ +  G   + +++ T EG+    +K+GL  +EA LL GA             + A +V  D++D       +G    + P T   + S++YG   G         FD++ +A L G  +      ID           K L +D ++  +V +Y   GNNN F+KD  +CY+ LT LG   T R
Sbjct:    6 MALALLHVASTCAFMAPVSSPCRSLEASRTMSHNRAAARQILRMSTESSHVEARRTFLKSAL---TLPLTLAVGQRAGAEVFFDTERYGDKELKVSTINKVKQQFRALYEKKPELLVPLFRLAMEDALSFDAGTRENGPDGSVLQRVGGPGSEYLKEAAEEVRRIKSELNRQTQLTSADIIAFAGAVAIEATGGPRTVVQLGRAD-GKPS-SKSGMSSWDFSAPTAEGILGAMSKSGLTAKEAVLLAGAXXXXXXXXXXXXXAIANKVVCDVEDPSCTSEEEGYYGLYSPVTIRSETSNLYGKNRGASAVNSNTGFDSARIAGLAGDAKFSNKFLIDAASGKSDDPLAKALMSDKEMSKWVMEYGKKGNNNKFVKDCEKCYVALTELGRSNTSR 394          
BLAST of NO08G00210 vs. NCBI_GenBank
Match: CEM35639.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 157.9 bits (398), Expect = 6.000e-35
Identity = 111/291 (38.14%), Postives = 154/291 (52.92%), Query Frame = 0
Query:   77 AAASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLTLAVPFVRLAINDAIGYDAATDGGGPDGSITFEMDRAQNEGLKPALAVLTKVKGEMQSTNEVTFGDICAFAGAVAIESTGGPRIPVQLGRTDSGQPNVNNVGDPGYSWASMTGEGLKNTFTKAGLGPREATLLYGAVGAV-HLATKDAGQSAGEVDADIDDDGE--IEAFIP-TTFGKQSDIYGAQLGTK--KFDASYL--ALVGKGQAVGLGTIDKVLATDPQLKTFVTKYAGNNNAFLKDLNECYLKLTTLG 360
            A A V FD  RYGDKELKIATVNKLKQ +  AI     LA   VRLAI++A+ Y AAT  GG DGSI  E+D+ +N  ++ A+ +L +++ +++ TNEVTF D+ ++AGA AIE  GGPR   QLGR  +  P+  +     + W  +        F ++G+ P+EA ++   V  V  +  K+  Q                 ++ IP T  G Q   YG  LG K  K  A YL   L G         ++ VL   P L+ +V  YA +N +F KD+ E Y KL+  G
Sbjct:    3 AQAVVQFDRGRYGDKELKIATVNKLKQTVGLAITEKPHLAGQLVRLAISNALSYVAATGEGGLDGSIREEVDQPENADVREAVELLERIRKDIKRTNEVTFADLLSYAGAEAIELVGGPRFSPQLGRGQTMGPSKTSA---HFDWGKIDAAEAVRAFERSGMSPKEAAVMISTVAWVDRITAKEEAQXXXXXXXXXXXXXXXIFQSEIPDTRVGMQK--YGETLGGKSTKLTAQYLKNLLRGGNTTEQASRLELVLLQSP-LRDYVEAYAKDNKSFTKDIAEVYQKLSLAG 287          
BLAST of NO08G00210 vs. NCBI_GenBank
Match: XP_005707450.1 (ascorbate peroxidase [Galdieria sulphuraria] >EME30930.1 ascorbate peroxidase [Galdieria sulphuraria])

HSP 1 Score: 131.0 bits (328), Expect = 7.800e-27
Identity = 111/345 (32.17%), Postives = 164/345 (47.54%), Query Frame = 0
Query:   43 RMAASSNNYDRRSLFVKSAAMSSLLALSLSSARP----AAASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLTLAVPFVRLAINDAIGYDAATDGGGPDGSITFEMDRAQNEGLKPALAVLTKVKGEMQSTNEVTFGDICAFAGAVAIESTGGPRIPVQLGRTDSGQPN-----VNNVGDPGYSWASMTGEGLKNTFTKAGL-GPREATLLYGAVGAVHLA------TKDAGQSAGEVDADIDDDGEIEAFIPTTFGKQSDIYGAQ-----LGTKKFDASYLALV-----GKGQAVGLGTIDK--VLATDPQLKTFVTKYAGNNNAFLKDLNECYLKLTTLG 360
            R+  + N   RR+   K+   +S+  L  +S         A V FD DRYGDKEL I+T+N+LKQ LRN ++ +L L   +++LA++DA+ Y   T  GG +GS+ FEM R  N  L    +    ++   QS ++V +GD  AFAG+VA++  G PR+ +Q+GR D   P+       +  D  Y++A      L+  F +AGL   R   L  GA+G +         +K  G+       DI D  E      T  GK++   G Q     L   KF   +L  +      K       T DK  VL  +P+   +V  YA NN  F  D  + Y  ++ LG
Sbjct:   60 RIWMNHNKVSRRTFLSKALVYTSVGGLLTTSLTKFPLYCDAEVFFDIDRYGDKELTISTINRLKQTLRNTLSKNLDLLPQYIQLALHDALSYSKQTKKGGLNGSLRFEMQRPGNAFLS---SCYQSIEEAHQSYSDVGYGDYIAFAGSVALDIVGAPRVKLQVGREDVSGPDDESQLSRSTQDVSYTYA------LEKDFQQAGLEATRNCVLFLGALGFLSEVCEQFSNSKQKGEEESSDTWDIFDQPEFTYGDITQKGKRTVAVGTQVRKLKLPGIKFSNQFLKKLVNQKNNKQTNSQSFTQDKYLVLLEEPRFLKYVEYYAKNNQKFRGDFVDAYHDISLLG 395          
BLAST of NO08G00210 vs. NCBI_GenBank
Match: EJK54830.1 (hypothetical protein THAOC_25510 [Thalassiosira oceanica])

HSP 1 Score: 128.6 bits (322), Expect = 3.900e-26
Identity = 120/405 (29.63%), Postives = 187/405 (46.17%), Query Frame = 0
Query:   10 LLLAALVALSTTTGISAFVLPCSSKSGSSRAGLRMAASSNNYDRRSLFVKSAAMSSLLALSLSSARPAAASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLTLAVPFVRLAINDAIGYDAATDGGGPDGS-----ITFEMDRAQNEGLKPALAVLTKVKGEMQSTNEVTFGDICAFAGAVAIESTGGPRIPVQLGRTDSG--QPNVNNVGDPGYSWASMTGEGLKNTFTKAGLGPREATLLYGAV------------GAVHLATKDAGQSAGEV----------DADI---------DDDGEIEA-------FIPTTFGKQSDIYGAQL-GTKKFDAS----YLALVGKGQAVGLGTIDKVLATD-PQLKTFVTKYAGNNNAFLKDLNECYLKLTTLGYKGT 364
            LLL A   +S     S+     S +  SS A   ++A  N  DRRS    +AA +   A++      A+A V  DP  YGD+EL+++ V+ L++ +R ++    +L   F  LA+ D++ YD  T+ GGPDGS     I+ +   A  + L+    VL + K  ++  + +T  D  A AGA A+ + GGP +P QLGRT++    P  +++        +++G  + + F  +GL  RE T L G +            G+   A+K   + AG++          D DI         DDDGE          +I  TFG   D +G +  G KK + S     L+ V           D +L+ D P  +T+V+KY      + KDL  CY  +T LG + T
Sbjct:    5 LLLLAATVVSVEGFSSSNTHVGSQQMASSTA---ISAKENENDRRSFLANAAAAAGASAIA-GIPGQASAKVFLDPAMYGDQELRVSAVDSLRESVRRSLLQKPSLTPYFFELALLDSLSYDTQTNEGGPDGSIIKAVISSKGTDAHTKALQECANVLIESKKNLKKLSSITIADAVALAGAEAVNAVGGPTLPTQLGRTEAAAKAPIPSSMPPLDLFTGAVSGMDVYDVFQSSGLTDREMTALLGCLLSIDTIEKETPEGSWKEASKPKFREAGKIGRMSEFKKLTDEDIANELAKDDEDDDGESYTVSGDDGWYIADTFGTADDKFGKRASGEKKIELSSALKNLSKVSPSTTQYSWIKDLLLSKDLPTAQTYVSKYGSKPLVYEKDLKVCYNSVTQLGAEFT 405          
BLAST of NO08G00210 vs. NCBI_GenBank
Match: XP_002293286.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89747.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 124.8 bits (312), Expect = 5.600e-25
Identity = 109/364 (29.95%), Postives = 168/364 (46.15%), Query Frame = 0
Query:   52 DRRSLFVKSA-AMSSLLALSLSSARPAAASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLTLAVPFVRLAINDAIGYDAATDGGGPDGSI-----TFEMDRAQNEGLKPALAVLTKVKGEMQSTNEVTFGDICAFAGAVAIESTGGPRIPVQLGRTDSGQ--PNVNNVGDPGYSWASMTGEGLKNTFTKAGLGPREATLLYG---AVGAVHLAT---------KDAGQSAGEV----------DADI---------DDDGEIEA-------FIPTTFGKQSDIYGAQLGTKKFDASYLALVGKG-QAVGLGTIDKVLATDPQLK--TFVTKYAGNNNAFLKDLNECYLKLTTLG--YKGTK 365
            DRRS   +S   + ++  +S  S+  A+A V  DP  YGD+EL+++ V+ L++ +R A+    +L   F+ LA+ D++ YD  T+ GGPDGS+     + + D A  + L+    VL + K  ++  + +T  D  A AGA A+ + GGP +P QLGRTD+ Q  P  +++          + E +  TF  +GL  RE T L G   ++  +  AT         K   + AG++          D DI         +D+GE          +I  TFG Q D +G  +     DA+  +   K  Q    G        +  L   T+VTKY      + KDL   Y  +T LG  Y G K
Sbjct:   45 DRRSFLGQSTQQLLTIAGISTLSSTSASARVFLDPAMYGDQELRVSAVDSLRESVRRALLQKPSLTPYFLELALLDSLSYDIETNEGGPDGSVIKAVLSSKEDSAHVKSLQECALVLVEAKKNLKKLSSITIADAVALAGAEAVNAVGGPVLPTQLGRTDAAQKAPIPSSMPPLTLFAGDQSNELVLETFKSSGLTEREMTALLGCLLSIDTIEKATPEGDWKASKKPKFREAGKIGRMSEFKALSDEDIANELAKDSEEDEGESYTVDGDDGWYIADTFGTQKDRFGQNVANGNGDANNFSSTLKNLQKEKQGGTQYAWIREFLLSKATWVTKYGSKPLVYEKDLKVAYNAVTQLGAEYTGGK 408          
BLAST of NO08G00210 vs. NCBI_GenBank
Match: XP_005853842.1 (hypothetical protein NGA_0439800, partial [Nannochloropsis gaditana CCMP526] >EKU22521.1 hypothetical protein NGA_0439800, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 115.2 bits (287), Expect = 4.400e-22
Identity = 64/83 (77.11%), Postives = 69/83 (83.13%), Query Frame = 0
Query:   44 MAASSNNYDRRSLFVKSAAMSSLLALSLSSARPAAASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLTLAVPFVRLAIND 127
            M  +S++ DRRSL    A +SS  ALSLSS  PA ASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDL+LAV FVRLAIND
Sbjct:   10 MNQASDDCDRRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAIND 92          
The following BLAST results are available for this feature:
BLAST of NO08G00210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26506.11.500e-7079.53ascorbate peroxidase [Nannochloropsis gaditana][more]
EWM26509.11.000e-6369.67l-ascorbate peroxidase [Nannochloropsis gaditana][more]
CBN74988.14.700e-5643.53conserved unknown protein [Ectocarpus siliculosus][more]
XP_005853840.11.100e-4985.59ascorbate peroxidase [Nannochloropsis gaditana CCM... [more]
XP_005831559.17.800e-4335.28hypothetical protein GUITHDRAFT_152902 [Guillardia... [more]
CEM35639.16.000e-3538.14unnamed protein product [Vitrella brassicaformis C... [more]
XP_005707450.17.800e-2732.17ascorbate peroxidase [Galdieria sulphuraria] >EME3... [more]
EJK54830.13.900e-2629.63hypothetical protein THAOC_25510 [Thalassiosira oc... [more]
XP_002293286.15.600e-2529.95predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_005853842.14.400e-2277.11hypothetical protein NGA_0439800, partial [Nannoch... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL107nonsL107Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR142ngnoR142Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR138ngnoR138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009040NSK009040Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G00210.1NO08G00210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581817gene_3342Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101473g1gene4018Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G00210.1NO08G00210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G00210 ID=NO08G00210|Name=NO08G00210|organism=Nannochloropsis oceanica|type=gene|length=2130bp
AAGCAGGACCGCCATTCGTGCACAAGGCCGTTTTGGGGTTTGCCGCGGCA
AGCAACCGACAGCACATCAAGCATGAAGACTCACCAGCTACGACCCTGTC
TGCTTCTGGCCGCCCTCGTGGCATTGAGCACGACCACAGGGATCTCTGCA
TTTGTCCTCCCATGCAGCAGCAAAAGTGGCAGCAGCCGTGCAGgtaggtc
gagattggggaagtcgaagggggggtcatatgcgaataacacgtcttcat
tcctccccctcccctgtcatgtgccctcccccaccctccccatatgtctc
tttccaaagcagGCCTCCGCATGGCTGCTTCATCGAACAACTACGATCGC
CGCAGTCTTTTTGTGAAGAGTGCTGCTATGTCCTCTCTCTTGGCGCTCTC
ACTCTCGTCTGCTCGgtacgtgcgatgattctctttgtgaggggaccttg
cgaactaggcctcattccgtcccctcctcattcgcctcagtaatgatcac
ttggcctgcatgcgcttgcaaatgtgtgtttggtttaagcaagagaaggc
actggggtctggcgtatgtggctttgattatctctttcctctcatcctcc
cttccttcctccctctctcctttcttccactagCCCTGCCGCGGCCTCGG
TCGCCTTTGACCCCGACCGTTACGGCGACAAGGAGCTCAAGATTGCCACA
GTAAACAAATTAAAGCAAAAACTCCGCAATGCCATCGCGGGGGACTTGAC
GCTGGCCGTGCCTTTCGTGCGGTTGGCGATTAATGACGgtagggagggag
ggagggagggagggagggggagggaaaaaacaaacaaaggaagtgagtga
aagataggggaatgaaagatacgacggaatagtcttggcaatttctgccc
ctcatttgccccttttttttacagCCATTGGCTACGATGCCGCCACGGAC
GGCGGAGGTCCCGACGGTTCCATCACTTTCGAAATGGACCGTGCGCAGAA
CGAAGGTCTCAAGCCCGCCCTCGCCGTCCTTACCAAGGTCAAAGGGGAAA
TGCAGAGTACCAATGAAGTGACCTTCGGCGATATCTGTGCCTTTGCCGGT
GCTGTCGCGATTGAGAGCACGGGCGGCCCCCGGATCCCTGTGCAGTTGGG
GAGgtaaggagggaggaagaagcagggattatgcatgaaaagctagtggg
aaatgtaatccctggatactcattatcacacatcctggcggttcgtattc
aattgaatttatcctccctcccctccgccctcccttccccacagAACCGA
CTCGGGCCAACCCAACGTGAACAATGTCGGCGATCCGGGCTATTCCTGGG
CCTCCATGACGGGAGAAGGGCTCAAAAACACGTTCACCAAGGCCGGTTTG
GGACCCCGgtaggtggtaggacgtataatcttgtactcattatgtgcggc
acctttctttttatgtgaactttgaatgctgcgcttgtctgactcatcga
tgacttctcttttcttctcttttcgcccctgaatttcttgactacttgtt
ttgtagGGAGGCTACCCTCCTCTACGGTGCCGTCGGAGCAGTCCATCTGG
CCACCAAGGACGCAGGGCAATCCGCTGGGGAGGTGGACGCGGACATCGAC
GACGACGGTGAGATCGAAGCGTTCATCCCCACGACGTTCGGCAAACAAAG
TGATATCTACGGCGCGCAATTGGGCACCAAAAAGTTCGATGCCTCGTACC
TTGCCCTGGTTGGAAAGGGGCAAGCGGTGGGCTTGGGTACGATTGACAAG
GTGTTGGCGACCGATCCACAGTTGAAGACATTTGTGACGAAGTACGCTGG
GAACAACAATGCCTTTTTGAAGGATCTGAATGAGTGTTATCTAAAACTGA
CGACGTTGGGTTACAAGGGTACGAAGCGAAATGATTAAGACTGGATGGCG
GTGGAAAAGATCGTCTTCAGCAGTGCAGGAGAAGGACGGACAAAAGCAAT
TAGTTTTACTTGTTTCACATTTATCTCAGAGATTATCTTTGACAAAACAG
AGAGGGATGTCCCTGTGTGTCTTCCGCGACACAAAACAGCGAAACAACAT
ACTTTAAAAAAAAATCCTATGCACATGCCA
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protein sequence of NO08G00210.1

>NO08G00210.1-protein ID=NO08G00210.1-protein|Name=NO08G00210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=368bp
MKTHQLRPCLLLAALVALSTTTGISAFVLPCSSKSGSSRAGLRMAASSNN
YDRRSLFVKSAAMSSLLALSLSSARPAAASVAFDPDRYGDKELKIATVNK
LKQKLRNAIAGDLTLAVPFVRLAINDAIGYDAATDGGGPDGSITFEMDRA
QNEGLKPALAVLTKVKGEMQSTNEVTFGDICAFAGAVAIESTGGPRIPVQ
LGRTDSGQPNVNNVGDPGYSWASMTGEGLKNTFTKAGLGPREATLLYGAV
GAVHLATKDAGQSAGEVDADIDDDGEIEAFIPTTFGKQSDIYGAQLGTKK
FDASYLALVGKGQAVGLGTIDKVLATDPQLKTFVTKYAGNNNAFLKDLNE
CYLKLTTLGYKGTKRND*
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Synonyms
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