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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr8 | genome | chr8:82773..84902 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO08G00210.1 vs.
Match: EWM26506.1 (ascorbate peroxidase [Nannochloropsis gaditana]) HSP 1 Score: 276.2 bits (705), Expect = 1.500e-70 Identity = 136/171 (79.53%), Postives = 150/171 (87.72%), Query Frame = 0
Query: 197 IPVQLGRTDSGQPNVNNVGDPGYSWASMTGEGLKNTFTKAGLGPREATLLYGAVGAVHLATKDAGQSAGEVDADIDDDGEIEAFIPTTFGKQSDIYGAQLGTKKFDASYLALVGKGQAVGLGTIDKVLATDPQLKTFVTKYAGNNNAFLKDLNECYLKLTTLGYKGTKRND 368
+P+ RTDSG PN NNVG GY+W SM+G+GL TFTKAG G REA LLYGA+GAV+LATKDAG++AGEVDADIDDDGEIEAFIP TFGKQSDIYGAQLG +KFDASYLA + KGQ VGLG++DK LA DPQLKTFV KYAGNNNAFLKDLNECYLKLTTLGY+GTKRND
Sbjct: 1 MPLPSLRTDSGAPNKNNVGASGYAWNSMSGDGLLQTFTKAGFGAREAVLLYGAMGAVYLATKDAGKTAGEVDADIDDDGEIEAFIPNTFGKQSDIYGAQLGNRKFDASYLAQIAKGQTVGLGSVDKALA-DPQLKTFVGKYAGNNNAFLKDLNECYLKLTTLGYQGTKRND 170
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO08G00210.1 ID=NO08G00210.1|Name=NO08G00210.1|organism=Nannochloropsis oceanica|type=mRNA|length=1368bp AAGCAGGACCGCCATTCGTGCACAAGGCCGTTTTGGGGTTTGCCGCGGCA AGCAACCGACAGCACATCAAGCATGAAGACTCACCAGCTACGACCCTGTC TGCTTCTGGCCGCCCTCGTGGCATTGAGCACGACCACAGGGATCTCTGCA TTTGTCCTCCCATGCAGCAGCAAAAGTGGCAGCAGCCGTGCAGGCCTCCG CATGGCTGCTTCATCGAACAACTACGATCGCCGCAGTCTTTTTGTGAAGA GTGCTGCTATGTCCTCTCTCTTGGCGCTCTCACTCTCGTCTGCTCGCCCT GCCGCGGCCTCGGTCGCCTTTGACCCCGACCGTTACGGCGACAAGGAGCT CAAGATTGCCACAGTAAACAAATTAAAGCAAAAACTCCGCAATGCCATCG CGGGGGACTTGACGCTGGCCGTGCCTTTCGTGCGGTTGGCGATTAATGAC GCCATTGGCTACGATGCCGCCACGGACGGCGGAGGTCCCGACGGTTCCAT CACTTTCGAAATGGACCGTGCGCAGAACGAAGGTCTCAAGCCCGCCCTCG CCGTCCTTACCAAGGTCAAAGGGGAAATGCAGAGTACCAATGAAGTGACC TTCGGCGATATCTGTGCCTTTGCCGGTGCTGTCGCGATTGAGAGCACGGG CGGCCCCCGGATCCCTGTGCAGTTGGGGAGAACCGACTCGGGCCAACCCA ACGTGAACAATGTCGGCGATCCGGGCTATTCCTGGGCCTCCATGACGGGA GAAGGGCTCAAAAACACGTTCACCAAGGCCGGTTTGGGACCCCGGGAGGC TACCCTCCTCTACGGTGCCGTCGGAGCAGTCCATCTGGCCACCAAGGACG CAGGGCAATCCGCTGGGGAGGTGGACGCGGACATCGACGACGACGGTGAG ATCGAAGCGTTCATCCCCACGACGTTCGGCAAACAAAGTGATATCTACGG CGCGCAATTGGGCACCAAAAAGTTCGATGCCTCGTACCTTGCCCTGGTTG GAAAGGGGCAAGCGGTGGGCTTGGGTACGATTGACAAGGTGTTGGCGACC GATCCACAGTTGAAGACATTTGTGACGAAGTACGCTGGGAACAACAATGC CTTTTTGAAGGATCTGAATGAGTGTTATCTAAAACTGACGACGTTGGGTT ACAAGGGTACGAAGCGAAATGATTAAGACTGGATGGCGGTGGAAAAGATC GTCTTCAGCAGTGCAGGAGAAGGACGGACAAAAGCAATTAGTTTTACTTG TTTCACATTTATCTCAGAGATTATCTTTGACAAAACAGAGAGGGATGTCC CTGTGTGTCTTCCGCGACACAAAACAGCGAAACAACATACTTTAAAAAAA AATCCTATGCACATGCCA back to topprotein sequence of NO08G00210.1 >NO08G00210.1-protein ID=NO08G00210.1-protein|Name=NO08G00210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=368bp MKTHQLRPCLLLAALVALSTTTGISAFVLPCSSKSGSSRAGLRMAASSNN YDRRSLFVKSAAMSSLLALSLSSARPAAASVAFDPDRYGDKELKIATVNK LKQKLRNAIAGDLTLAVPFVRLAINDAIGYDAATDGGGPDGSITFEMDRA QNEGLKPALAVLTKVKGEMQSTNEVTFGDICAFAGAVAIESTGGPRIPVQ LGRTDSGQPNVNNVGDPGYSWASMTGEGLKNTFTKAGLGPREATLLYGAV GAVHLATKDAGQSAGEVDADIDDDGEIEAFIPTTFGKQSDIYGAQLGTKK FDASYLALVGKGQAVGLGTIDKVLATDPQLKTFVTKYAGNNNAFLKDLNE CYLKLTTLGYKGTKRND* back to topmRNA from alignment at chr8:82773..84902+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO08G00210.1 ID=NO08G00210.1|Name=NO08G00210.1|organism=Nannochloropsis oceanica|type=mRNA|length=2130bp|location=Sequence derived from alignment at chr8:82773..84902+ (Nannochloropsis oceanica) AAGCAGGACCGCCATTCGTGCACAAGGCCGTTTTGGGGTTTGCCGCGGCA
AGCAACCGACAGCACATCAAGCATGAAGACTCACCAGCTACGACCCTGTC
TGCTTCTGGCCGCCCTCGTGGCATTGAGCACGACCACAGGGATCTCTGCA
TTTGTCCTCCCATGCAGCAGCAAAAGTGGCAGCAGCCGTGCAGGTAGGTC
GAGATTGGGGAAGTCGAAGGGGGGGTCATATGCGAATAACACGTCTTCAT
TCCTCCCCCTCCCCTGTCATGTGCCCTCCCCCACCCTCCCCATATGTCTC
TTTCCAAAGCAGGCCTCCGCATGGCTGCTTCATCGAACAACTACGATCGC
CGCAGTCTTTTTGTGAAGAGTGCTGCTATGTCCTCTCTCTTGGCGCTCTC
ACTCTCGTCTGCTCGGTACGTGCGATGATTCTCTTTGTGAGGGGACCTTG
CGAACTAGGCCTCATTCCGTCCCCTCCTCATTCGCCTCAGTAATGATCAC
TTGGCCTGCATGCGCTTGCAAATGTGTGTTTGGTTTAAGCAAGAGAAGGC
ACTGGGGTCTGGCGTATGTGGCTTTGATTATCTCTTTCCTCTCATCCTCC
CTTCCTTCCTCCCTCTCTCCTTTCTTCCACTAGCCCTGCCGCGGCCTCGG
TCGCCTTTGACCCCGACCGTTACGGCGACAAGGAGCTCAAGATTGCCACA
GTAAACAAATTAAAGCAAAAACTCCGCAATGCCATCGCGGGGGACTTGAC
GCTGGCCGTGCCTTTCGTGCGGTTGGCGATTAATGACGGTAGGGAGGGAG
GGAGGGAGGGAGGGAGGGGGAGGGAAAAAACAAACAAAGGAAGTGAGTGA
AAGATAGGGGAATGAAAGATACGACGGAATAGTCTTGGCAATTTCTGCCC
CTCATTTGCCCCTTTTTTTTACAGCCATTGGCTACGATGCCGCCACGGAC
GGCGGAGGTCCCGACGGTTCCATCACTTTCGAAATGGACCGTGCGCAGAA
CGAAGGTCTCAAGCCCGCCCTCGCCGTCCTTACCAAGGTCAAAGGGGAAA
TGCAGAGTACCAATGAAGTGACCTTCGGCGATATCTGTGCCTTTGCCGGT
GCTGTCGCGATTGAGAGCACGGGCGGCCCCCGGATCCCTGTGCAGTTGGG
GAGGTAAGGAGGGAGGAAGAAGCAGGGATTATGCATGAAAAGCTAGTGGG
AAATGTAATCCCTGGATACTCATTATCACACATCCTGGCGGTTCGTATTC
AATTGAATTTATCCTCCCTCCCCTCCGCCCTCCCTTCCCCACAGAACCGA
CTCGGGCCAACCCAACGTGAACAATGTCGGCGATCCGGGCTATTCCTGGG
CCTCCATGACGGGAGAAGGGCTCAAAAACACGTTCACCAAGGCCGGTTTG
GGACCCCGGTAGGTGGTAGGACGTATAATCTTGTACTCATTATGTGCGGC
ACCTTTCTTTTTATGTGAACTTTGAATGCTGCGCTTGTCTGACTCATCGA
TGACTTCTCTTTTCTTCTCTTTTCGCCCCTGAATTTCTTGACTACTTGTT
TTGTAGGGAGGCTACCCTCCTCTACGGTGCCGTCGGAGCAGTCCATCTGG
CCACCAAGGACGCAGGGCAATCCGCTGGGGAGGTGGACGCGGACATCGAC
GACGACGGTGAGATCGAAGCGTTCATCCCCACGACGTTCGGCAAACAAAG
TGATATCTACGGCGCGCAATTGGGCACCAAAAAGTTCGATGCCTCGTACC
TTGCCCTGGTTGGAAAGGGGCAAGCGGTGGGCTTGGGTACGATTGACAAG
GTGTTGGCGACCGATCCACAGTTGAAGACATTTGTGACGAAGTACGCTGG
GAACAACAATGCCTTTTTGAAGGATCTGAATGAGTGTTATCTAAAACTGA
CGACGTTGGGTTACAAGGGTACGAAGCGAAATGATTAAGACTGGATGGCG
GTGGAAAAGATCGTCTTCAGCAGTGCAGGAGAAGGACGGACAAAAGCAAT
TAGTTTTACTTGTTTCACATTTATCTCAGAGATTATCTTTGACAAAACAG
AGAGGGATGTCCCTGTGTGTCTTCCGCGACACAAAACAGCGAAACAACAT
ACTTTAAAAAAAAATCCTATGCACATGCCA back to topCoding sequence (CDS) from alignment at chr8:82773..84902+ >NO08G00210.1 ID=NO08G00210.1|Name=NO08G00210.1|organism=Nannochloropsis oceanica|type=CDS|length=1104bp|location=Sequence derived from alignment at chr8:82773..84902+ (Nannochloropsis oceanica) ATGAAGACTCACCAGCTACGACCCTGTCTGCTTCTGGCCGCCCTCGTGGC ATTGAGCACGACCACAGGGATCTCTGCATTTGTCCTCCCATGCAGCAGCA AAAGTGGCAGCAGCCGTGCAGGCCTCCGCATGGCTGCTTCATCGAACAAC TACGATCGCCGCAGTCTTTTTGTGAAGAGTGCTGCTATGTCCTCTCTCTT GGCGCTCTCACTCTCGTCTGCTCGCCCTGCCGCGGCCTCGGTCGCCTTTG ACCCCGACCGTTACGGCGACAAGGAGCTCAAGATTGCCACAGTAAACAAA TTAAAGCAAAAACTCCGCAATGCCATCGCGGGGGACTTGACGCTGGCCGT GCCTTTCGTGCGGTTGGCGATTAATGACGCCATTGGCTACGATGCCGCCA CGGACGGCGGAGGTCCCGACGGTTCCATCACTTTCGAAATGGACCGTGCG CAGAACGAAGGTCTCAAGCCCGCCCTCGCCGTCCTTACCAAGGTCAAAGG GGAAATGCAGAGTACCAATGAAGTGACCTTCGGCGATATCTGTGCCTTTG CCGGTGCTGTCGCGATTGAGAGCACGGGCGGCCCCCGGATCCCTGTGCAG TTGGGGAGAACCGACTCGGGCCAACCCAACGTGAACAATGTCGGCGATCC GGGCTATTCCTGGGCCTCCATGACGGGAGAAGGGCTCAAAAACACGTTCA CCAAGGCCGGTTTGGGACCCCGGGAGGCTACCCTCCTCTACGGTGCCGTC GGAGCAGTCCATCTGGCCACCAAGGACGCAGGGCAATCCGCTGGGGAGGT GGACGCGGACATCGACGACGACGGTGAGATCGAAGCGTTCATCCCCACGA CGTTCGGCAAACAAAGTGATATCTACGGCGCGCAATTGGGCACCAAAAAG TTCGATGCCTCGTACCTTGCCCTGGTTGGAAAGGGGCAAGCGGTGGGCTT GGGTACGATTGACAAGGTGTTGGCGACCGATCCACAGTTGAAGACATTTG TGACGAAGTACGCTGGGAACAACAATGCCTTTTTGAAGGATCTGAATGAG TGTTATCTAAAACTGACGACGTTGGGTTACAAGGGTACGAAGCGAAATGA TTAA back to top
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