NO08G00210.1, NO08G00210.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G00210.1
Unique NameNO08G00210.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1368
Alignment locationchr8:82773..84902 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:82773..84902 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO08G00210.1 vs.
Match: EWM26506.1 (ascorbate peroxidase [Nannochloropsis gaditana])

HSP 1 Score: 276.2 bits (705), Expect = 1.500e-70
Identity = 136/171 (79.53%), Postives = 150/171 (87.72%), Query Frame = 0
Query:  197 IPVQLGRTDSGQPNVNNVGDPGYSWASMTGEGLKNTFTKAGLGPREATLLYGAVGAVHLATKDAGQSAGEVDADIDDDGEIEAFIPTTFGKQSDIYGAQLGTKKFDASYLALVGKGQAVGLGTIDKVLATDPQLKTFVTKYAGNNNAFLKDLNECYLKLTTLGYKGTKRND 368
            +P+   RTDSG PN NNVG  GY+W SM+G+GL  TFTKAG G REA LLYGA+GAV+LATKDAG++AGEVDADIDDDGEIEAFIP TFGKQSDIYGAQLG +KFDASYLA + KGQ VGLG++DK LA DPQLKTFV KYAGNNNAFLKDLNECYLKLTTLGY+GTKRND
Sbjct:    1 MPLPSLRTDSGAPNKNNVGASGYAWNSMSGDGLLQTFTKAGFGAREAVLLYGAMGAVYLATKDAGKTAGEVDADIDDDGEIEAFIPNTFGKQSDIYGAQLGNRKFDASYLAQIAKGQTVGLGSVDKALA-DPQLKTFVGKYAGNNNAFLKDLNECYLKLTTLGYQGTKRND 170          
The following BLAST results are available for this feature:
BLAST of NO08G00210.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26506.11.500e-7079.53ascorbate peroxidase [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00210NO08G00210Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G00210.1NO08G00210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G00210.1.cds1NO08G00210.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G00210.1.cds2NO08G00210.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G00210.1.cds3NO08G00210.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G00210.1.cds4NO08G00210.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G00210.1.cds5NO08G00210.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G00210.1.cds6NO08G00210.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G00210.1 ID=NO08G00210.1|Name=NO08G00210.1|organism=Nannochloropsis oceanica|type=mRNA|length=1368bp
AAGCAGGACCGCCATTCGTGCACAAGGCCGTTTTGGGGTTTGCCGCGGCA
AGCAACCGACAGCACATCAAGCATGAAGACTCACCAGCTACGACCCTGTC
TGCTTCTGGCCGCCCTCGTGGCATTGAGCACGACCACAGGGATCTCTGCA
TTTGTCCTCCCATGCAGCAGCAAAAGTGGCAGCAGCCGTGCAGGCCTCCG
CATGGCTGCTTCATCGAACAACTACGATCGCCGCAGTCTTTTTGTGAAGA
GTGCTGCTATGTCCTCTCTCTTGGCGCTCTCACTCTCGTCTGCTCGCCCT
GCCGCGGCCTCGGTCGCCTTTGACCCCGACCGTTACGGCGACAAGGAGCT
CAAGATTGCCACAGTAAACAAATTAAAGCAAAAACTCCGCAATGCCATCG
CGGGGGACTTGACGCTGGCCGTGCCTTTCGTGCGGTTGGCGATTAATGAC
GCCATTGGCTACGATGCCGCCACGGACGGCGGAGGTCCCGACGGTTCCAT
CACTTTCGAAATGGACCGTGCGCAGAACGAAGGTCTCAAGCCCGCCCTCG
CCGTCCTTACCAAGGTCAAAGGGGAAATGCAGAGTACCAATGAAGTGACC
TTCGGCGATATCTGTGCCTTTGCCGGTGCTGTCGCGATTGAGAGCACGGG
CGGCCCCCGGATCCCTGTGCAGTTGGGGAGAACCGACTCGGGCCAACCCA
ACGTGAACAATGTCGGCGATCCGGGCTATTCCTGGGCCTCCATGACGGGA
GAAGGGCTCAAAAACACGTTCACCAAGGCCGGTTTGGGACCCCGGGAGGC
TACCCTCCTCTACGGTGCCGTCGGAGCAGTCCATCTGGCCACCAAGGACG
CAGGGCAATCCGCTGGGGAGGTGGACGCGGACATCGACGACGACGGTGAG
ATCGAAGCGTTCATCCCCACGACGTTCGGCAAACAAAGTGATATCTACGG
CGCGCAATTGGGCACCAAAAAGTTCGATGCCTCGTACCTTGCCCTGGTTG
GAAAGGGGCAAGCGGTGGGCTTGGGTACGATTGACAAGGTGTTGGCGACC
GATCCACAGTTGAAGACATTTGTGACGAAGTACGCTGGGAACAACAATGC
CTTTTTGAAGGATCTGAATGAGTGTTATCTAAAACTGACGACGTTGGGTT
ACAAGGGTACGAAGCGAAATGATTAAGACTGGATGGCGGTGGAAAAGATC
GTCTTCAGCAGTGCAGGAGAAGGACGGACAAAAGCAATTAGTTTTACTTG
TTTCACATTTATCTCAGAGATTATCTTTGACAAAACAGAGAGGGATGTCC
CTGTGTGTCTTCCGCGACACAAAACAGCGAAACAACATACTTTAAAAAAA
AATCCTATGCACATGCCA
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protein sequence of NO08G00210.1

>NO08G00210.1-protein ID=NO08G00210.1-protein|Name=NO08G00210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=368bp
MKTHQLRPCLLLAALVALSTTTGISAFVLPCSSKSGSSRAGLRMAASSNN
YDRRSLFVKSAAMSSLLALSLSSARPAAASVAFDPDRYGDKELKIATVNK
LKQKLRNAIAGDLTLAVPFVRLAINDAIGYDAATDGGGPDGSITFEMDRA
QNEGLKPALAVLTKVKGEMQSTNEVTFGDICAFAGAVAIESTGGPRIPVQ
LGRTDSGQPNVNNVGDPGYSWASMTGEGLKNTFTKAGLGPREATLLYGAV
GAVHLATKDAGQSAGEVDADIDDDGEIEAFIPTTFGKQSDIYGAQLGTKK
FDASYLALVGKGQAVGLGTIDKVLATDPQLKTFVTKYAGNNNAFLKDLNE
CYLKLTTLGYKGTKRND*
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mRNA from alignment at chr8:82773..84902+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G00210.1 ID=NO08G00210.1|Name=NO08G00210.1|organism=Nannochloropsis oceanica|type=mRNA|length=2130bp|location=Sequence derived from alignment at chr8:82773..84902+ (Nannochloropsis oceanica)
AAGCAGGACCGCCATTCGTGCACAAGGCCGTTTTGGGGTTTGCCGCGGCA AGCAACCGACAGCACATCAAGCATGAAGACTCACCAGCTACGACCCTGTC TGCTTCTGGCCGCCCTCGTGGCATTGAGCACGACCACAGGGATCTCTGCA TTTGTCCTCCCATGCAGCAGCAAAAGTGGCAGCAGCCGTGCAGGTAGGTC GAGATTGGGGAAGTCGAAGGGGGGGTCATATGCGAATAACACGTCTTCAT TCCTCCCCCTCCCCTGTCATGTGCCCTCCCCCACCCTCCCCATATGTCTC TTTCCAAAGCAGGCCTCCGCATGGCTGCTTCATCGAACAACTACGATCGC CGCAGTCTTTTTGTGAAGAGTGCTGCTATGTCCTCTCTCTTGGCGCTCTC ACTCTCGTCTGCTCGGTACGTGCGATGATTCTCTTTGTGAGGGGACCTTG CGAACTAGGCCTCATTCCGTCCCCTCCTCATTCGCCTCAGTAATGATCAC TTGGCCTGCATGCGCTTGCAAATGTGTGTTTGGTTTAAGCAAGAGAAGGC ACTGGGGTCTGGCGTATGTGGCTTTGATTATCTCTTTCCTCTCATCCTCC CTTCCTTCCTCCCTCTCTCCTTTCTTCCACTAGCCCTGCCGCGGCCTCGG TCGCCTTTGACCCCGACCGTTACGGCGACAAGGAGCTCAAGATTGCCACA GTAAACAAATTAAAGCAAAAACTCCGCAATGCCATCGCGGGGGACTTGAC GCTGGCCGTGCCTTTCGTGCGGTTGGCGATTAATGACGGTAGGGAGGGAG GGAGGGAGGGAGGGAGGGGGAGGGAAAAAACAAACAAAGGAAGTGAGTGA AAGATAGGGGAATGAAAGATACGACGGAATAGTCTTGGCAATTTCTGCCC CTCATTTGCCCCTTTTTTTTACAGCCATTGGCTACGATGCCGCCACGGAC GGCGGAGGTCCCGACGGTTCCATCACTTTCGAAATGGACCGTGCGCAGAA CGAAGGTCTCAAGCCCGCCCTCGCCGTCCTTACCAAGGTCAAAGGGGAAA TGCAGAGTACCAATGAAGTGACCTTCGGCGATATCTGTGCCTTTGCCGGT GCTGTCGCGATTGAGAGCACGGGCGGCCCCCGGATCCCTGTGCAGTTGGG GAGGTAAGGAGGGAGGAAGAAGCAGGGATTATGCATGAAAAGCTAGTGGG AAATGTAATCCCTGGATACTCATTATCACACATCCTGGCGGTTCGTATTC AATTGAATTTATCCTCCCTCCCCTCCGCCCTCCCTTCCCCACAGAACCGA CTCGGGCCAACCCAACGTGAACAATGTCGGCGATCCGGGCTATTCCTGGG CCTCCATGACGGGAGAAGGGCTCAAAAACACGTTCACCAAGGCCGGTTTG GGACCCCGGTAGGTGGTAGGACGTATAATCTTGTACTCATTATGTGCGGC ACCTTTCTTTTTATGTGAACTTTGAATGCTGCGCTTGTCTGACTCATCGA TGACTTCTCTTTTCTTCTCTTTTCGCCCCTGAATTTCTTGACTACTTGTT TTGTAGGGAGGCTACCCTCCTCTACGGTGCCGTCGGAGCAGTCCATCTGG CCACCAAGGACGCAGGGCAATCCGCTGGGGAGGTGGACGCGGACATCGAC GACGACGGTGAGATCGAAGCGTTCATCCCCACGACGTTCGGCAAACAAAG TGATATCTACGGCGCGCAATTGGGCACCAAAAAGTTCGATGCCTCGTACC TTGCCCTGGTTGGAAAGGGGCAAGCGGTGGGCTTGGGTACGATTGACAAG GTGTTGGCGACCGATCCACAGTTGAAGACATTTGTGACGAAGTACGCTGG GAACAACAATGCCTTTTTGAAGGATCTGAATGAGTGTTATCTAAAACTGA CGACGTTGGGTTACAAGGGTACGAAGCGAAATGATTAAGACTGGATGGCG GTGGAAAAGATCGTCTTCAGCAGTGCAGGAGAAGGACGGACAAAAGCAAT TAGTTTTACTTGTTTCACATTTATCTCAGAGATTATCTTTGACAAAACAG AGAGGGATGTCCCTGTGTGTCTTCCGCGACACAAAACAGCGAAACAACAT ACTTTAAAAAAAAATCCTATGCACATGCCA
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Coding sequence (CDS) from alignment at chr8:82773..84902+

>NO08G00210.1 ID=NO08G00210.1|Name=NO08G00210.1|organism=Nannochloropsis oceanica|type=CDS|length=1104bp|location=Sequence derived from alignment at chr8:82773..84902+ (Nannochloropsis oceanica)
ATGAAGACTCACCAGCTACGACCCTGTCTGCTTCTGGCCGCCCTCGTGGC
ATTGAGCACGACCACAGGGATCTCTGCATTTGTCCTCCCATGCAGCAGCA
AAAGTGGCAGCAGCCGTGCAGGCCTCCGCATGGCTGCTTCATCGAACAAC
TACGATCGCCGCAGTCTTTTTGTGAAGAGTGCTGCTATGTCCTCTCTCTT
GGCGCTCTCACTCTCGTCTGCTCGCCCTGCCGCGGCCTCGGTCGCCTTTG
ACCCCGACCGTTACGGCGACAAGGAGCTCAAGATTGCCACAGTAAACAAA
TTAAAGCAAAAACTCCGCAATGCCATCGCGGGGGACTTGACGCTGGCCGT
GCCTTTCGTGCGGTTGGCGATTAATGACGCCATTGGCTACGATGCCGCCA
CGGACGGCGGAGGTCCCGACGGTTCCATCACTTTCGAAATGGACCGTGCG
CAGAACGAAGGTCTCAAGCCCGCCCTCGCCGTCCTTACCAAGGTCAAAGG
GGAAATGCAGAGTACCAATGAAGTGACCTTCGGCGATATCTGTGCCTTTG
CCGGTGCTGTCGCGATTGAGAGCACGGGCGGCCCCCGGATCCCTGTGCAG
TTGGGGAGAACCGACTCGGGCCAACCCAACGTGAACAATGTCGGCGATCC
GGGCTATTCCTGGGCCTCCATGACGGGAGAAGGGCTCAAAAACACGTTCA
CCAAGGCCGGTTTGGGACCCCGGGAGGCTACCCTCCTCTACGGTGCCGTC
GGAGCAGTCCATCTGGCCACCAAGGACGCAGGGCAATCCGCTGGGGAGGT
GGACGCGGACATCGACGACGACGGTGAGATCGAAGCGTTCATCCCCACGA
CGTTCGGCAAACAAAGTGATATCTACGGCGCGCAATTGGGCACCAAAAAG
TTCGATGCCTCGTACCTTGCCCTGGTTGGAAAGGGGCAAGCGGTGGGCTT
GGGTACGATTGACAAGGTGTTGGCGACCGATCCACAGTTGAAGACATTTG
TGACGAAGTACGCTGGGAACAACAATGCCTTTTTGAAGGATCTGAATGAG
TGTTATCTAAAACTGACGACGTTGGGTTACAAGGGTACGAAGCGAAATGA
TTAA
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Synonyms
Publications