NO07G03960, NO07G03960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G03960 vs. NCBI_GenBank
Match: EWM26967.1 (tryptophan-rich sensory-like protein [Nannochloropsis gaditana]) HSP 1 Score: 227.3 bits (578), Expect = 6.300e-56 Identity = 127/225 (56.44%), Postives = 153/225 (68.00%), Query Frame = 0 Query: 9 SRCLCLVLMALMVAVHGFRLPTNMAQRHHITSRFSLLKPHTRSLATMPT-----------------------VVAPLRSDYLEDLP--VSNKGPPVQWGALGTWVVATALQFATITAVMAFMETAFIKLNASKQVSLWVVRAFFAFMSLRSRVFSILDNSRPSVEKEERKRILKKRPSWMPPAKAFPVIWISIGVLRTIASSLIYQTTNTLLAPALLALILHLSI 209 + CL L L+ L+ A H FRL + + PH + P+ VVA ++YL++LP S KGPP+QWGALGTW++ATALQFATI A M ME AF++ N SKQ S+W+VRAFFAFMSLRSRVFSILDNSRP+V E+RKR L+KRPSWMPPAKAFPVIWISIGVLRTIASSL+Y+TTNTLL+PALLA +LHL + Sbjct: 15 ANCLVLGLLLLLAATHAFRLKGLPSTTRQTSKLLLHPSPHQTLITGQPSRPTRITIAYLSSFARRVAPSRSMVVAASGTEYLDNLPSRASKKGPPMQWGALGTWILATALQFATIVAFMYGMEKAFLRFNLSKQASIWLVRAFFAFMSLRSRVFSILDNSRPTVAMEDRKRRLRKRPSWMPPAKAFPVIWISIGVLRTIASSLVYETTNTLLSPALLAFVLHLCV 239
BLAST of NO07G03960 vs. NCBI_GenBank
Match: CBJ30165.1 (tryptophan-rich sensory-like protein [Ectocarpus siliculosus]) HSP 1 Score: 197.2 bits (500), Expect = 7.000e-47 Identity = 99/204 (48.53%), Postives = 142/204 (69.61%), Query Frame = 0 Query: 83 ALGTWVVATALQFATITAVMAFMETAFIKLNASKQVSLWVVRAF---FAFMSLRSRVFSILDNSRPSVEKEERKRILKKRPSWMPPAKAFPVIWISIGVLRTIASSLIYQTT-NTLLAPALLALILHLSIGDTWNTITNVEDRQGASVPGVFLVWLSVVNAVVQFYNTLPLAGKVLAPSAVWITVANVLVFSIWRLNGSEPMYP 283 A+ ++ TA +F I ++A M+ + +K W R F F++++SR FS+L+ RPS+ KE+ ++I ++RP WMPP KAFPVIWI+IGVLR ++++++++ L+A + A++LHLS+GDTWN I NVE + G +V GVFLVWLSV NAV ++Y LP AG VL PS +WI+VAN+LV SIWRLNG EP+YP Sbjct: 92 AVAKYIAGTAGEFTIIMGLLALMQGKLLPRLPAK----WAQRTVFLTFGFLAMKSRTFSLLNARRPSLAKEKEEKIERRRPDWMPPIKAFPVIWITIGVLRALSTAMVWEALGGNLVATPIAAMVLHLSVGDTWNHINNVEKKLGVAVSGVFLVWLSVANAVYRYYQVLPKAGLVLLPSLLWISVANLLVQSIWRLNGKEPLYP 291
BLAST of NO07G03960 vs. NCBI_GenBank
Match: XP_005834354.1 (hypothetical protein GUITHDRAFT_69647 [Guillardia theta CCMP2712] >EKX47374.1 hypothetical protein GUITHDRAFT_69647 [Guillardia theta CCMP2712]) HSP 1 Score: 181.4 bits (459), Expect = 4.000e-42 Identity = 97/240 (40.42%), Postives = 152/240 (63.33%), Query Frame = 0 Query: 46 KPHTRSLATMPTVVAPLRSDYLEDLPVSNKGPPVQWGALGTWVVATALQFATITAVMAFMETAFIKLNASKQVSLWVVRAFFAFMSLRSRVFSILDNSRPSVEKEERKRILKKRPSWMPPAKAFPVIWISIGVLRTIASSLIYQTT-NTLLAPALLALILHLSIGDTWNTITNVEDRQGASVPGVFLVWLSVVNAVVQFYNTLPLAGKVLAPSAVWITVANVLVFSIWRLNGSEPMYPFR 285 KP + +++ LR+ E V + V + +GTW AT ++ A ++A M ++T L L ++ FFA M+L+SR+FSILD SRP++ + + KRPSW PP FP++W +IG+LRT++S ++++ +L L+A++ HLSIGDTWN I NVE R+G++V GV VW SVV ++ T+PLAG +LAPS +W+++A+VL+F+IW+LNG EP+ P++ Sbjct: 23 KPRLQRQGASRNLLSDLRATLSEGGNVEKR---VDYAKVGTWFGATVVEVALLSAAMFAVQTIGGYLPPIGYKCLAIL--FFASMALKSRIFSILDASRPTMGEVQE----TKRPSWTPPPIVFPIVWSTIGILRTVSSVVVWEAVGRQMLVLPLIAMMTHLSIGDTWNNINNVERRKGSAVAGVAFVWTSVVTCTYLYWQTIPLAGMILAPSVLWLSIASVLIFNIWKLNGYEPILPYK 253
BLAST of NO07G03960 vs. NCBI_GenBank
Match: XP_022838978.1 (TspO/MBR-related protein [Ostreococcus tauri] >CEF97935.1 TspO/MBR-related protein [Ostreococcus tauri]) HSP 1 Score: 180.3 bits (456), Expect = 8.800e-42 Identity = 93/211 (44.08%), Postives = 138/211 (65.40%), Query Frame = 0 Query: 79 VQWGALGTWVVATALQFATITAVMAFMETA-FIKLNASKQVSLWVVRAFFAF-MSLRSRVFSILDNSRPSVEKEERKRILKKRPSWMPPAKAFPVIWISIGVLRTIASSLIYQTTNTLLAPALLALILHLSIGDTWNTITNVEDRQGASVPGVFLVWLSVVNAVVQFYNTLPLAGKVLAPSAVWITVANVLVFSIWRLNGSEPMYPFRKRE 288 + +GA+ +V ATA + + I A + F++ A KL+AS + + A F ++LRSRVFS L+ SRP + E + +KRPSW PPA FP++WIS+ LR++++ L++ TT LL PA+++L+ HLSIGDTWN+I NVE + G + GV V S N V Q+Y LP AG ++AP A+W+TVA LV+ IW +NG + +YP + R+ Sbjct: 31 LDFGAVARYVAATAFEVSAIGAFLYFVQMAGLAKLHASNLGAAKAITAVIFFGLALRSRVFSPLNASRPKIANERLSKKQRKRPSWTPPAVVFPLVWISMAFLRSLSTMLVFTTTGNLLHPAVMSLVAHLSIGDTWNSINNVEKKLGVAAIGVLFVVGSAYNVVAQYYKVLPTAGYMIAPLAIWLTVATALVWGIWNINGRQVLYPTKPRK 241
BLAST of NO07G03960 vs. NCBI_GenBank
Match: OUS48030.1 (tryptophan-rich sensory protein [Ostreococcus tauri]) HSP 1 Score: 180.3 bits (456), Expect = 8.800e-42 Identity = 93/211 (44.08%), Postives = 138/211 (65.40%), Query Frame = 0 Query: 79 VQWGALGTWVVATALQFATITAVMAFMETA-FIKLNASKQVSLWVVRAFFAF-MSLRSRVFSILDNSRPSVEKEERKRILKKRPSWMPPAKAFPVIWISIGVLRTIASSLIYQTTNTLLAPALLALILHLSIGDTWNTITNVEDRQGASVPGVFLVWLSVVNAVVQFYNTLPLAGKVLAPSAVWITVANVLVFSIWRLNGSEPMYPFRKRE 288 + +GA+ +V ATA + + I A + F++ A KL+AS + + A F ++LRSRVFS L+ SRP + E + +KRPSW PPA FP++WIS+ LR++++ L++ TT LL PA+++L+ HLSIGDTWN+I NVE + G + GV V S N V Q+Y LP AG ++AP A+W+TVA LV+ IW +NG + +YP + R+ Sbjct: 95 LDFGAVARYVAATAFEVSAIGAFLYFVQMAGLAKLHASNLGAAKAITAVIFFGLALRSRVFSPLNASRPKIANERLSKKQRKRPSWTPPAVVFPLVWISMAFLRSLSTMLVFTTTGNLLHPAVMSLVAHLSIGDTWNSINNVEKKLGVAAIGVLFVVGSAYNVVAQYYKVLPTAGYMIAPLAIWLTVATALVWGIWNINGRQVLYPTKPRK 305
BLAST of NO07G03960 vs. NCBI_GenBank
Match: XP_002502255.1 (tryptophan-rich sensory-like protein [Micromonas commoda] >ACO63513.1 tryptophan-rich sensory-like protein [Micromonas commoda]) HSP 1 Score: 175.6 bits (444), Expect = 2.200e-40 Identity = 96/229 (41.92%), Postives = 142/229 (62.01%), Query Frame = 0 Query: 65 DYLEDLPVSNKGPP----VQWGALGTWVVATALQFATITAVMAFMETAFIKLNASKQVSLWVVRAFFAFMSLRSRVFSILDNSRPSVEKEERKRILKKRPSWMPPAKAFPVIWISIGVLRTIASSLIYQTTNTLLAPALLALILHLSIGDTWNTITNVEDRQGASVPGVFLVWLSVVNAVVQFYNTLPLAGKVLAPSAVWITVANVLVFSIWRLN-----GSEPMYPFR 285 D +E + S++ P V GA+ + + TA+QF+ + ++ + +V A+F F +L+SRVFS L+ SRP VE E+ ++RPSWMPP AFP+IW +I VLR ++S +++ TT TL PA A++LHL++GDTWN+I N E R G +V GV V SV N V Q+++ P AG ++APSAVWITVA VLV++IW++N EP++P + Sbjct: 145 DDIEPVVTSSESPDAGMVVDGGAIWRYFLCTAVQFSVMVWFSMWLNVGISRSPLDLTYQKALVGAWFGFNALKSRVFSPLNASRPKVEGEKDAIKERRRPSWMPPPIAFPIIWTTIAVLRAVSSVVVFSTTGTLNNPAHFAMLLHLAVGDTWNSINNAEKRLGTAVVGVCAVLASVYNVVYQYWSVTPTAGVLIAPSAVWITVATVLVYTIWKINPREDGTREPLWPMK 373
BLAST of NO07G03960 vs. NCBI_GenBank
Match: CEM28829.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 163.3 bits (412), Expect = 1.100e-36 Identity = 87/193 (45.08%), Postives = 124/193 (64.25%), Query Frame = 0 Query: 92 ALQFATITAVMAFMETAFIKLNAS--KQVSLWVVRAFFAFMSLRSRVFSILDNSRPSVEKEERKRILKKRPSWMPPAKAFPVIWISIGVLRTIASSLIYQTTNTLLAPALLALILHLSIGDTWNTITNVEDRQGASVPGVFLVWLSVVNAVVQFYNTLPLAGKVLAPSAVWITVANVLVFSIWRLNGSEPMYP 283 ALQ+A I +A ++ L +S V + +FFA M++RSR+FS+L+N RP+ E ++ RPSWMPP FP +W +I +LRT++S+LI++ L P + AL+LHLSIGDTWNTI NV+ R+G + V LV S + A ++ LP+AG +L P +W++VA VLV IWRLNG EP+YP Sbjct: 5 ALQWACILVTLAALDRGMPLLPSSLPSFVPTALTASFFALMAVRSRLFSVLNNQRPTPLSERKEIAEGTRPSWMPPPIVFPFVWGTIAMLRTLSSTLIWRQAGAFLTPPIAALMLHLSIGDTWNTIQNVDRRRGTAASVVLLVLASSIAANRLYFAALPIAGWILLPQTMWLSVATVLVCDIWRLNGCEPLYP 197
BLAST of NO07G03960 vs. NCBI_GenBank
Match: WP_039724631.1 (TspO and MBR like protein [Lyngbya confervoides] >KIF20500.1 TspO and MBR like protein [Aphanocapsa montana BDHKU210001] >KIF42287.1 TspO and MBR like protein [Lyngbya confervoides BDU141951]) HSP 1 Score: 162.9 bits (411), Expect = 1.500e-36 Identity = 95/211 (45.02%), Postives = 134/211 (63.51%), Query Frame = 0 Query: 80 QWGALGT--WVVATALQFATITAVMAFMETAFIKLNASKQVSLW----VVRAFFAFMSLRSRVFSILDNSRPSVEKEERKRILKKRPSWMPPAKAFPVIWISIGVLRTIASSLIYQTT-NTLLAPALLALILHLSIGDTWNTITNVEDRQGASVPGVFL-VWLSVVNAVVQFYNTLPLAGKVLAPSAVWITVANVLVFSIWRLNGSEPMYP 283 +W T +V AT Q + +TA++ FM+ F +L + S W + AFFAF++LRSR+FS+LDN+R S + +RP W PP AFP++W+SI VLR +++ L++ T T L L+ ++HLS+GDTWNTI VE R G +VP V + LSV+ V +Y TLPLAG ++APSA W+ +A VL S+WRLNG EP+YP Sbjct: 34 KWDRAATLNYVGATIAQISVMTALLWFMDLGFERLPLATLPS-WSATAIAVAFFAFITLRSRLFSLLDNTRNS-----GRYNAIQRPGWAPPPLAFPIVWMSIAVLRVVSAYLVWSTLGQTFLCWPLVLYMIHLSLGDTWNTIFTVEGRLGHAVPVVIVGPLLSVIVVTVSYYLTLPLAGWIIAPSAAWLAIATVLCISLWRLNGVEPLYP 238
BLAST of NO07G03960 vs. NCBI_GenBank
Match: WP_087590022.1 (TspO protein [unicellular cyanobacterium SU3]) HSP 1 Score: 162.5 bits (410), Expect = 1.900e-36 Identity = 82/162 (50.62%), Postives = 115/162 (70.99%), Query Frame = 0 Query: 126 FFAFMSLRSRVFSILDNSRPSVEKEERKRILKKRPSWMPPAKAFPVIWISIGVLRTIASSLIYQTTN-TLLAPALLALILHLSIGDTWNTITNVEDRQGASVPGVFL-VWLSVVNAVVQFYNTLPLAGKVLAPSAVWITVANVLVFSIWRLNGSEPMYPFRK 286 FFA ++LRSR+FS LDN+R S ++ RP+W PP AFP+IW++IGVLR I+S L++Q + LA L+A ++HL++GDTWNTI VE + GA+VP V + WLS + + ++ T LAG +LAPS +WITVA +LV+SIWRLNG EP+YP ++ Sbjct: 95 FFAVLTLRSRLFSPLDNTRSSGRYQQ-----VTRPNWAPPPLAFPIIWMTIGVLRVISSVLVWQAVDENFLAVPLIAFVIHLALGDTWNTIFTVEGKLGAAVPVVIMGPWLSAIVVTILYWQTALLAGLLLAPSLIWITVACILVYSIWRLNGCEPLYPLKR 251
BLAST of NO07G03960 vs. NCBI_GenBank
Match: WP_015083192.1 (TspO and MBR-like protein [Anabaena sp. 90] >AFW96637.1 TspO and MBR like protein [Anabaena sp. 90]) HSP 1 Score: 161.8 bits (408), Expect = 3.200e-36 Identity = 90/208 (43.27%), Postives = 128/208 (61.54%), Query Frame = 0 Query: 83 ALGTWVVATALQFATITAVMAFMETAFIKLNASKQVSLW----VVRAFFAFMSLRSRVFSILDNSRPSVEKEERKRILKKRPSWMPPAKAFPVIWISIGVLRTIASSLIYQTTN-TLLAPALLALILHLSIGDTWNTITNVEDRQGASVPGVFL-VWLSVVNAVVQFYNTLPLAGKVLAPSAVWITVANVLVFSIWRLNGSEPMYPFR 285 A+ + + T LQ + V+ ME I ++ + W V FF +S+RSR+FS+LDN+R ++ RP W PP AFP++W+ I VLR I+S L++Q N L L+ ++HL++GDTWNTI VE R GA+VP V L WLS + ++ T+PLAG +L+ S VW+TVA+VLVFSIW+LNGSEP+YP + Sbjct: 43 AVLVYKLGTILQIGVMILVLLGMEKLVILIDNNSAFPSWFSTLVTALFFGLLSIRSRIFSLLDNTRSRTTYDQ-----VIRPRWSPPPLAFPIVWMFIAVLRVISSVLVWQEMNHQFLVLPLILFVVHLALGDTWNTIFTVERRLGAAVPVVILGPWLSAIVVTAIYWQTVPLAGMILSFSCVWLTVASVLVFSIWQLNGSEPLYPLK 245 The following BLAST results are available for this feature:
BLAST of NO07G03960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03960 ID=NO07G03960|Name=NO07G03960|organism=Nannochloropsis oceanica|type=gene|length=3132bpback to top protein sequence of NO07G03960.1 >NO07G03960.1-protein ID=NO07G03960.1-protein|Name=NO07G03960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=289bpback to top Synonyms
Publications
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