NO07G03090, NO07G03090 (gene) Nannochloropsis oceanica

Overview
NameNO07G03090
Unique NameNO07G03090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3024
Alignment locationchr7:861644..864667 -

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Properties
Property NameValue
DescriptionLight harvesting complex protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:861644..864667 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO07G03090 vs. NCBI_GenBank
Match: ETP07267.1 (hypothetical protein F441_16406 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 93.2 bits (230), Expect = 2.300e-15
Identity = 109/400 (27.25%), Postives = 170/400 (42.50%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLPPRST-TSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHKPL--VTRVGATIQPGDLLLSNHTSALDILYFASRSLPLFSCFTLAPEIRFSSLSAFG---AVWKAGKVPNKAGQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDV-------PSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAV 452
            MEK+++W+D  TGINPF+P R   TS        +V    L  VR PL+ ++   LFLV+++                                     +++LA+   LG L  L R+   LL     + +L   G+   E+ AN R+LGL     +     TRVG+    GD+L+ N+TS L+I+Y A R  P+F   T +       +   G   A++++  +P  A +     K+    +R    +VV PE  RSNG+ +L F   VL  L                VHL GF         + + G +    F        T+ V  + A+D+          P S+ S   +++ +      E++R LLA ML    + LG +DFV+F  Y+  V
Sbjct:    1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLLSFVALFLVNIV-------------------------------------VSILAVIPFLGRL--LKRITQWLL----CSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVGS----GDVLVCNYTSFLEIMYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKIADVVRRAAGPVVVLPEGARSNGKAVLRFIP-VLQNL-----------PVKTRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVAVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHV 341          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: XP_008618960.1 (hypothetical protein SDRG_14598 [Saprolegnia diclina VS20] >XP_008618961.1 hypothetical protein, variant [Saprolegnia diclina VS20] >EQC27540.1 hypothetical protein SDRG_14598 [Saprolegnia diclina VS20] >EQC27541.1 hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 92.4 bits (228), Expect = 3.900e-15
Identity = 113/392 (28.83%), Postives = 165/392 (42.09%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLPPRSTTSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHK-PLVTRVGATIQPGDLLLSNHTSALDILYFASRSLPLF---SCFTLAPEIRFSSLSAFGAVWKAGKVP-NKAGQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDVPSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAV 452
            MEK+ +W+D  TGINPF+PP     S      G +L  G++A+          W+ L+ LL      +L   L L A  + + P                       LG L  +HR+   + +   L  V+ TM +   E+ AN+R+LGL PPG K P + RV A    GDL++ NH+S  D+LY A R  P F   S    + +    S +  GA+ +A   P +     V L  VL   +R    +VVF E  RSNG+ +L F                     S  +H+        ++  THT GS+L    R+L     ++ V  + A  V              T +T       +R LLA ML    + +   DFV+F KY+  V
Sbjct:    1 MEKYNRWSDLTTGINPFVPPPHKLPSNVVLRWGQILVGGVVAL--------ARWVLLLPLL------VLWSLLELVALLLGYVP----------------------FLGRL--VHRVVDWVCV--GLILVVTTMFVK--EEDANVRRLGLLPPGSKAPSLRRVAA----GDLIVCNHSSVFDVLYLAFRYSPTFVFPSEKESSAKGLVQSCTVLGALRQAMSPPLSSLSSPVKLADVL---RRASGPVVVFAEGTRSNGKAVLPF------------HVDLTALPTSTRIHIVAIRYEYKNVAPTHTCGSALVQLCRVLSHVYHSMKVLRLPAEYV--------------TDAT------SVRTLLASMLRTKAVDVTCADFVSFNKYWEHV 311          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: XP_012213178.1 (hypothetical protein SPRG_18350 [Saprolegnia parasitica CBS 223.65] >KDO16113.1 hypothetical protein SPRG_18350 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 92.0 bits (227), Expect = 5.100e-15
Identity = 109/393 (27.74%), Postives = 158/393 (40.20%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLPPRSTTSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHK-PLVTRVGATIQPGDLLLSNHTSALDILYFASRSLPLFSCFTLAPEIR----FSSLSAFGAVWKAGKVP-NKAGQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDVPSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAV 452
            MEK+ +W+D  TGINPF+PP     S      G +L  G++A+          W+ L+ LL       L  SLL                          L+AL   LG +P + RL   ++    +  +L    +   E+ AN+R+LGL PPG K P +  V A    GDL++ NH+S  D+LY A R  P F  F    E        S + FGA+ +A   P +     V L  VL  A      +VVF E  RSNG+ +L F                     S  +H+        ++  THT GS+L    R+       + + ++ A  V                      +  +R LLA ML    + +   DFV+F KY+  V
Sbjct:    1 MEKYNRWSDLTTGINPFVPPPHKLPSNVVLRWGQILVGGVVAL--------ARWVLLLPLL-------LLWSLL-------------------------ELIAL--LLGYIPLIGRLIHRVVDWVCVGLILVVTTMFVKEEDANVRRLGLLPPGFKTPSLRGVAA----GDLVVCNHSSVFDVLYLAFRYSPTF-VFPCEKESSAKGLVQSCTVFGALRQAMSPPLSSLSSPVKLADVLGRAS---GPVVVFAEGTRSNGKAVLPF------------HVDLTALPTSTRIHIVAIRYEYKNIAPTHTCGSALLQLCRVFSHVYHAMKIMHLPAEYVTD--------------------ASAVRALLASMLRTKAIDVSCADFVSFNKYWQHV 311          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: XP_012202384.1 (hypothetical protein SPRG_07719 [Saprolegnia parasitica CBS 223.65] >KDO27007.1 hypothetical protein SPRG_07719 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 92.0 bits (227), Expect = 5.100e-15
Identity = 110/393 (27.99%), Postives = 158/393 (40.20%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLPPRSTTSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHK-PLVTRVGATIQPGDLLLSNHTSALDILYFASRSLPLFSCFTLAPEIR----FSSLSAFGAVWKAGKVP-NKAGQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDVPSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAV 452
            MEK+ +W+D  TGINPF+PP     S      G +L  G++A+          W+ L+ LL       L  SLL                          L+AL   LG +P L RL   ++    +  +L    +   E+ AN+R+LGL PPG K P + RV A    GDL++ NH+S  D+LY A R  P F  F    E        S + FGA+ +    P +     V L  VL  A      +VVF E  RSNG+ +L F                     S  +H+        ++  THT GS+L    R+       + + ++ A  V                      +  +R LLA ML    + +   DFV+F KY+  V
Sbjct:    1 MEKYNRWSDLTTGINPFVPPPHKLPSNVVLRWGQLLVGGVVAL--------ARWVLLLPLL-------LLWSLL-------------------------ELIAL--LLGYVPLLGRLVHRVVDWVCVGLILVVTTMFVKEEDANVRRLGLLPPGSKAPSLRRVAA----GDLVVCNHSSVFDVLYLAFRYSPTF-VFPCEKESSAKGLVQSCTIFGALRQTMSPPLSSLSSPVKLADVLGRAS---GPVVVFAEGTRSNGKAVLPF------------HVDLTALPTSTRIHIVAIRYEYKNIAPTHTCGSALLQLCRVFSHVYHAMKIMHLPAEYVTD--------------------ASAVRALLASMLRTKAIDVSCADFVSFNKYWQHV 311          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: OWZ04045.1 (hypothetical protein PHMEG_00024124 [Phytophthora megakarya])

HSP 1 Score: 89.7 bits (221), Expect = 2.500e-14
Identity = 101/398 (25.38%), Postives = 167/398 (41.96%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLPPRSTTSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHKPLVTRVGATIQPGDLLLSNHTSALDILYFASRSLPLFSCFTLAPEIRFSSL----SAFGAVWKAGKVPNKAGQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDV-------PSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAV 452
            MEK+++WAD  TGINPF+P R   +S      G  +++        L  ++GS   +++LL  P   + T +L+L    V+                          + ++P L R    L      + ++   G+   E+ AN R+LGL     K   ++    + PGD+++ N+TS L+ILY A R  P+F  F    +     L        A++++  +P    +     K+    +R    +VV PE  RSNG+ +L F   VL  L                VHL  F         +H+ G +    F        T+ VT + A+D+          P ++ S   +++ +      E++R LLA ML    + LG +DFV+F  Y+  V
Sbjct:    1 MEKYSRWADLTTGINPFVPQRRRFTS------GWPVTI--------LQAVSGS---VLALLRFPLVLVCTVALVLINVVVS-------------------------IVAVIPFLGRFLKRLTEWLLCSLIILLFGVFTSEEGANTRRLGLATA--KTKSSKGSTRVAPGDVVVCNYTSFLEILYLAKRFSPVF-VFAAEGKSNDGGLVHVCGLLEALYRSLAMPVSVERVKPTRKIADVVRRASGPVVVLPEGARSNGKAVLKFIP-VLQNL-----------PVKTRVHLVAFRYEFKHFSPSHSAGGAWSHLFWTAFHLYHTMRVTVLSAKDLNLDDLTPTKLPSNKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWKHV 341          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: OQR93195.1 (hypothetical protein ACHHYP_02803 [Achlya hypogyna])

HSP 1 Score: 88.6 bits (218), Expect = 5.700e-14
Identity = 106/393 (26.97%), Postives = 155/393 (39.44%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLPPRSTTSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLL--LRPALAAVLKTMGISFIEQHANLRKLGLRPPGHK-PLVTRVGATIQPGDLLLSNHTSALDILYFASRSLPLFS--CFTLAPEIRFSSLSAFGAVWKAGKVPNKAGQGVTLDKVLAEAKR-ERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDVPSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAV 452
            MEK+ +W+D  TGINPF+PP     S  A                                   W  I  G ++  A +V   P L              L  L + L  +P L RL    +  +   L  ++ TM +   E+ AN R+LGL PPG K P + RV A    GD+++ NH+S  D+LY A R  P F+  C   + +    + + FGA+ +A   P  +   ++  + LA+  R     +VVF E  RSNG+ +L F   + +                  VH+        ++  THT GS L    R+      T  VT + A  V                    Q    +R LLA ML    + +   DFV+F KY+  V
Sbjct:    1 MEKYNRWSDLTTGINPFVPPPHKLPSNVA---------------------------------LRWLQIAVGGVVALARWVLLLPVLLVWA---------VLEFLSLVLEYIPLLGRLVHRTVDWVFVGLIFIIVTMFVK--EEDANARRLGLLPPGSKAPSIARVKA----GDVVICNHSSVFDVLYMAYRYSPTFAFPCEKESGKGLVETFTVFGAIRQAMAPPLAS---LSNPRKLADVARCASGPVVVFAEGTRSNGKAVLPFHVALEE------------LPPHTRVHIAAIRYEYKNVSPTHTCGSGLWHLCRLFSHAYHTQRVTRLPAELV--------------------QDPSAVRSLLAAMLRTKAIDVSCADFVSFNKYWVHV 310          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: XP_009836920.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV73494.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 83.2 bits (204), Expect = 2.400e-12
Identity = 85/273 (31.14%), Postives = 126/273 (46.15%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLPPRSTTSSTAAKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACY--VNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHKPLVTRVGATIQPGDLLLSNHTSALDILYFASRSLP--LFSCFTLAPEIRFSSLSAFGAVWKAGKVP-NKAGQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGL 333
            MEK+++W+D  TGINPF+PP     + A      V   G+LA+          W+ L        F ++ G +LL+A +  ++H P L                           +HR    ++L   L  V+ T+ I   ++ AN R+LGL  PG KP        I+ GD++++NH+S LDILYF  R  P  +F C + A +    +    GA  +A   P     + V L  VL   +R    +VVFPE  RSNG+ +L F   +LD L
Sbjct:    1 MEKYSRWSDLTTGINPFVPPPHQLPANAILRWTQVFFGGILALL--------RWILL--------FPLVLGLVLLSAVHTILDHVPFLGR------------------------VIHRATDWIVL--GLILVVTTIFIK--DEAANARRLGLLTPGTKPPAL---GGIKAGDVIVANHSSVLDILYFGFRYSPVFVFPCASDASKNLVQTFGLLGAFAQAMAPPLTSLTRPVKLQDVL---RRTSSPVVVFPEGTRSNGKAVLTF-LPILDSL 222          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: KUF95738.1 (hypothetical protein AM588_10010546 [Phytophthora nicotianae])

HSP 1 Score: 81.3 bits (199), Expect = 9.100e-12
Identity = 81/288 (28.12%), Postives = 125/288 (43.40%), Query Frame = 0
Query:  176 PPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHKPL--VTRVGATIQPGDLLLSNHTSALDILYFASRSLPLFSCFTLAPEIRFSSLSAFG---AVWKAGKVPNKAGQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDV-------PSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAV 452
            P L RL   +      + +L   G+   E+ AN R+LGL     +     TRVG+    GD+L+ N+TS L+ILY A R  P+F   T +       +   G   A++++  +P  A +     K+    +R    +VV PE  RSNG+ +L F   VL  L                VHL GF         + + G +    F        T+ VT + A+D+          P S+ S   +++ +      E++R LLA ML    + LG +DFV+F  Y+  V
Sbjct:   40 PFLGRLLKRITQWLLCSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVGS----GDVLVCNYTSFLEILYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKITDVVRRAAGPVVVLPEGARSNGKAVLRFIP-VLQNL-----------PIKTRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVTVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHV 311          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: GAY01331.1 (Hypothetical protein PINS_009158, partial [Pythium insidiosum])

HSP 1 Score: 80.5 bits (197), Expect = 1.500e-11
Identity = 88/308 (28.57%), Postives = 137/308 (44.48%), Query Frame = 0
Query:  172 LGLLPPLHRLFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHKPLVTRVGATIQPGDLLLSNHTSALDILYFASRSLPLFSCFTL--APEIRFSSLSAFGAVWKAGKVPNKAGQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGL---AGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDV------PSYPG--------SRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAAVQIKDDKAAA 461
            LG +P L RL   L+     + +L  MG+   E+ AN R+LGL     K       A +  GD+++ NHTS +++LY A R  P+F   T   A +          A+ +A  +P  A    T  K++    R    +V+FPE  RSNG+ +L F   +L+ L    G G            VH+  F     +   +H+ G + +           ++ VT++ A+D+      P+           S  +S NK  + + AQ  E +RGLLA ML    + L   DFV+F +Y+  V     K+AA
Sbjct:   79 LGFVPLLGRLLKRLVEXLXCSLLLLLMGVLVTEEDANTRRLGLVANNAKGKHASSSARVGAGDVVVXNHTSXVEVLYLARRFSPVFLFVTEEGASKGLVHVCGLIEALVRALSLP-VAHDRATPRKLVDVIARASGPVVIFPEGARSNGKSVLRF-LPILEHLPLTQGTG-----ARKVXTRVHVVAFRYEYKNXSPSHSAGXAWKHVLWTFFYAYHSLRVTHLNAKDLDLQALTPTISSSSSFRAAKSAAASDNKHATLSGAQ-VERLRGLLAAMLRSKPVDLTVKDFVSFNRYWDHVTGGGKKSAA 378          
BLAST of NO07G03090 vs. NCBI_GenBank
Match: XP_009531573.1 (hypothetical protein PHYSODRAFT_562532 [Phytophthora sojae] >EGZ14144.1 hypothetical protein PHYSODRAFT_562532 [Phytophthora sojae])

HSP 1 Score: 75.5 bits (184), Expect = 5.000e-10
Identity = 108/400 (27.00%), Postives = 161/400 (40.25%), Query Frame = 0
Query:   65 MEKFAKWADKGTGINPFLPPRSTTSSTAAKAGGLVLSLGLLAV-RLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHR-----LFSLLLLRPALAAVLKTMGISFIEQHANLRKLGLRPPGHKPLVTRVGATIQPGDLLLSNHTSALDILYFASRSLPLFSCFTLAPEIRFSSLSAFG---AVWKAGKVPNKAGQGVTLDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEXXXXXXXXSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDV-------PSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYY 449
            MEK+++W+D  TGINPF+P R   +S    +   V+S  LLA+ R PL+ +    L LV+++                                     +++LA+   LG L  L R     L SLLLL   +  V  + G S                       RVG    PGD+++ N+TS L++LY A R  P+F   T         +   G   A++++  +P  A +     K+    KR    +VV PE  RSNG+ +L F   VL  L                VHL  F         +HT G +    F        T+ VT + A+D+          P S+ S     + +      E++R LLA ML    + LG +DFV+F  Y+
Sbjct:    1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVSILQVVSGSLLALARFPLVLVGSVALVLVNVV-------------------------------------VSILAVIPFLGRL--LKRATEWLLCSLLLL---IFGVFSSSGSS-----------------------RVG----PGDVVVCNYTSFLEVLYLAKRFSPVFVFATEGKSDDGGLVHVCGLVEALYRSLALPVSAERVKPTRKIADVVKRASGPVVVLPEGARSNGKAVLRFIP-VLQNL-----------PTKTRVHLVAFRYEFKRFSPSHTAGGAWSHLFWTAFHLYHTMRVTVLNAKDLNLDDLTPTKLPSSKSSKKQGDSKTLSTDQVEKLRSLLAAMLRTKAVDLGPEDFVSFNNYW 319          
The following BLAST results are available for this feature:
BLAST of NO07G03090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETP07267.12.300e-1527.25hypothetical protein F441_16406 [Phytophthora para... [more]
XP_008618960.13.900e-1528.83hypothetical protein SDRG_14598 [Saprolegnia dicli... [more]
XP_012213178.15.100e-1527.74hypothetical protein SPRG_18350 [Saprolegnia paras... [more]
XP_012202384.15.100e-1527.99hypothetical protein SPRG_07719 [Saprolegnia paras... [more]
OWZ04045.12.500e-1425.38hypothetical protein PHMEG_00024124 [Phytophthora ... [more]
OQR93195.15.700e-1426.97hypothetical protein ACHHYP_02803 [Achlya hypogyna... [more]
XP_009836920.12.400e-1231.14hypothetical protein, variant [Aphanomyces astaci]... [more]
KUF95738.19.100e-1228.13hypothetical protein AM588_10010546 [Phytophthora ... [more]
GAY01331.11.500e-1128.57Hypothetical protein PINS_009158, partial [Pythium... [more]
XP_009531573.15.000e-1027.00hypothetical protein PHYSODRAFT_562532 [Phytophtho... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000550NSK000550Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03090.3NO07G03090.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G03090.2NO07G03090.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G03090.1NO07G03090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581026gene_2641Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100056g41gene3484Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03090.3NO07G03090.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G03090.2NO07G03090.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G03090.1NO07G03090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03090 ID=NO07G03090|Name=NO07G03090|organism=Nannochloropsis oceanica|type=gene|length=3024bp
TTCATTTGTTGCATTCTTTTCATTCATTCATCCCATTTATTTAATTTATT
TCCCTCGTGGGGGCGTTATCCACAACACCACATGGTTACACGCACTCGCC
ACCTGCTCGTAGACCGGGTTACACTTCACCTGCCTCACAGGGCCTGTATG
CCCACTCAATCGACACACCACCCCGTCCATTACCCTCTCCTCCGTCGCAT
CAAACACACATACCTCCCCCTCCTCCGAGCCCGTCAAAATGTGGTTCACA
TCCGAGGTATAACAAGCTGTGATATTCAATCCCTTCTCATTCTTATAGCC
GGTCAGAAACCTCGTCACTTGCAAATCGTAAGTGTCAATCACAAGCGTCA
TCCCTCCCTTGGTCGACACCAGTAAATTCTTCCCGTCCGCGCTAAAGCTC
ATGTCAATCCACGGAGCCTGTACCAACTTACGAGCCACCTCAGGGTCAAT
CGTTGGTTGTTGTGCAAGCAACGTCTGTCGTAACTCATTCTCAGAGATCC
CGAAATTTTCAAAAGCCCCTTCACTGAACTTCCTCGCGTCATACAATTTC
AACAAATGTCTGTCTTGCACCTGCGCGCACACTGCAAAAACCAACCCCGA
CGGGTCAAACTCCGCTAAAACAGGACAAGGACTACTGCTGCTGTTGCTGT
AGCTTCCCCCACCACCTATCTGAATGTTGCCCTGGCCCAAGCACTTGGGT
TGCTGCAATGTCCATATCCGAACGGTACCATCAACCGATGCGCTCATAAA
TCGATCGTCTGTGTAAGACATGGCCAACGCTGTCACTCGCGCTTCATGGC
CCGAAAAAAAACGCAAGTACTGGTTGTCGTACAGGGACAGATAACGAATG
TCATGCGCCGTCGTTCCCAAGGCGGATGCTGTCTGGCTTGCCGAGGGCCG
GCTACTGCACAAAACACTCTGGGCATGATGCGTGAACCTGGCCAGCTCCA
CCCCATACTTCTTGCAAAATAGTTTCTTCCGCGCTTTGCCCTCCAAGGCA
TTTATCAGGTGCACGGTTCCGTCCTCCGCCGCGGTCACTAAATACTCACC
TTCCCGATGATAATCCAAGCAAGTGACTGGAGCCGTCCCCGAAACCACGC
AGCCACGTTGCAGCTCCTGCACCCGGACGGCTTCCAGGCCACTCATCCCG
CTACTTCCGCACGTCATCGTCAATTTCCAACTGCGTAGGTGTGTGAGGTG
GTATACGTGTGGTTTAGAATGGCCAAATTGCTGTGTGGAAGAAGTAAGGC
TTTCATCATCAAAGCGGCATTCTTCATCTGCCACTTTGTACTTCGGCACA
TCCACCACTCACAGCCCTTCCATCCAATTCACACCCCAGCACCAAAGGTA
AAACGACAAGGAAGCTTATCGGCCCGCTCGCCAGCTTGCCGCAGCCCTAG
CTTCCAGTCAATGGAGgtcagttagctcctgtacgcatgccccaacatgc
cctccctctccatcctcatttctctcatttcccctttcatttgtgttcat
ccttgaagAAATTCGCCAAGTGGGCCGATAAAGGTACGGGTATCAACCCT
TTTTTGCCACCACGCTCCACCACCTCCTCCACGGCAGCCAAGGCAGGGGG
CCTGGTTCTCAGTCTCGGCCTGCTCGCCGTGCGCCTGCCCCTCCTCTGTA
TCACAGGCAGCTGGCTCTTCCTCGTCAGTCTTCTCACCACCCCTTGGTTC
GACATTTTGACTGGCAGTCTCCTTCTTGCCGCCTGCTATGTCAATCACGC
ACCAAACCTACACACCGGAGGCTCTCCCACTCCCGAGCAAACAAGCATCA
CTCTCCTAGCCCTAGGAGTAAGCCTGGGCCTCCTCCCCCCCCTCCATCGT
CTTTTCTCCCTCCTCCTCCTCCGCCCAGCCCTTGCCGCTGTCCTCAAAAC
TATGGGCATATCCTTTATTGAACAACATGCGAATTTACGGAAGCTCGGTT
TGAGGCCACCAGGGCACAAGCCTCTAGTTACACGCGTGGGTGCGACCATT
CAACCCGGGGACCTCCTCCTGAGCAATCACACCTCTGCCTTGGACATCCT
TTATTTTGCCAGTCGTTCCTTACCGTTGTTTTCATGTTTCACGCTTGCCC
CCGAGATAAGATTTAGCTCCCTGTCGGCTTTCGGAGCGGTGTGGAAGGCA
GGCAAAGTACCTAATAAAGCAGGCCAAGGAGTGACTTTGGACAAGGTCTT
AGCAGAAGCCAAGAGGGAGAGAAGGTCATTGGTAGTGTTTCCGGAGATGG
TACGATCGAATGGGGAAGGAATATTGGCCTTTCCCAAGGGAGTGTTGGAC
GGTTTAGCGGGGGCAGGGGAGGGAGGGGGAGGAGCAGCAGGAGGAAGCGT
AGGAGTGCATTTGTTTGGGTTTAGGTGCGTTGTGGGAGAGGAGGGGGAAT
ACGGGAGGGAGAGAAGATGAAAGCAAGCTTGGAATACACCGTGATGCAGC
TGCGGGGGTCAAGCATATTATGCACTCCCGTAAACATTCTCTTCGACGGA
AAGGGTCATAGAAAGCGATGCCAGTGGCGCCTGAGGAGGGTGGGTTGGGA
GACGTTGCCTTAATGCTGCCTATGGATGTCATGTCTTGAACATGGATTCC
ACTACGTTCTTCCTATCTTTCTTCTCTCATACACATGCATATGTCTTCCC
ACACGACAGTGCCGTCAAAGGCGACCTTCTTGCCACGCATACCGTTGGTA
GCAGCTTGCGTTTCTTTTTCAGGATCCTCTGCCGACCGCGAACCACCGTC
CACGTCACTTACGTCTGCGCGCGAGACGTGCCTTCTTATCCCGGAAGCCG
CTGCAGCAGTGGGAATAAAAGCACCAGCAGCACACCAGCGCAATGGAGTG
AGGAAATTAGAGGCCTTCTGGCCGGTATGTTGGGACGACCTAAGCTTGGG
TTGGGGTACGATGATTTCGTAACCTTTGGTAAATATTATGCGGCAGTTCA
GATTAAAGATGATAAAGCAGCAGCGGCGTTGGCGAGTGCGAGGGAGAAGC
TGTAGCGATGAGGAAGGGAGGGGG
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protein sequence of NO07G03090.3

>NO07G03090.3-protein ID=NO07G03090.3-protein|Name=NO07G03090.3|organism=Nannochloropsis oceanica|type=polypeptide|length=428bp
MPQHALPLHPHFSHFPFHLCSSLKKFAKWADKGTGINPFLPPRSTTSSTA
AKAGGLVLSLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAAC
YVNHAPNLHTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALA
AVLKTMGISFIEQHANLRKLGLRPPGHKPLVTRVGATIQPGDLLLSNHTS
ALDILYFASRSLPLFSCFTLAPEIRFSSLSAFGAVWKAGKVPNKAGQGVT
LDKVLAEAKRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEGGGGA
AGGSVGVHLFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCA
RDVPSYPGSRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFV
TFGKYYAAVQIKDDKAAAALASAREKL*
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protein sequence of NO07G03090.2

>NO07G03090.2-protein ID=NO07G03090.2-protein|Name=NO07G03090.2|organism=Nannochloropsis oceanica|type=polypeptide|length=370bp
MAKLLCGRSKAFIIKAAFFICHFVLRHIHHSQPFHPIHTPAPKVKRQGSL
SARSPACRSPSFQSMEKFAKWADKGTGINPFLPPRSTTSSTAAKAGGLVL
SLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNL
HTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGI
SFIEQHANLRKLGLRPPGHKPLVTRVGATIQPGDLLLSNHTSALDILYFA
SRSLPLFSCFTLAPEIRFSSLSAFGAVWKAGKVPNKAGQGVTLDKVLAEA
KRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEGGGGAAGGSVGVH
LFGFRCVVGEEGEYGRERR*
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protein sequence of NO07G03090.1

>NO07G03090.1-protein ID=NO07G03090.1-protein|Name=NO07G03090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=470bp
MAKLLCGRSKAFIIKAAFFICHFVLRHIHHSQPFHPIHTPAPKVKRQGSL
SARSPACRSPSFQSMEKFAKWADKGTGINPFLPPRSTTSSTAAKAGGLVL
SLGLLAVRLPLLCITGSWLFLVSLLTTPWFDILTGSLLLAACYVNHAPNL
HTGGSPTPEQTSITLLALGVSLGLLPPLHRLFSLLLLRPALAAVLKTMGI
SFIEQHANLRKLGLRPPGHKPLVTRVGATIQPGDLLLSNHTSALDILYFA
SRSLPLFSCFTLAPEIRFSSLSAFGAVWKAGKVPNKAGQGVTLDKVLAEA
KRERRSLVVFPEMVRSNGEGILAFPKGVLDGLAGAGEGGGGAAGGSVGVH
LFGFSAVKGDLLATHTVGSSLRFFFRILCRPRTTVHVTYVCARDVPSYPG
SRCSSGNKSTSSTPAQWSEEIRGLLAGMLGRPKLGLGYDDFVTFGKYYAA
VQIKDDKAAAALASAREKL*
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Synonyms
Publications