NO07G01670, NO07G01670 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01670 vs. NCBI_GenBank
Match: EWM27180.1 (uracil-dna glycosylase superfamily [Nannochloropsis gaditana]) HSP 1 Score: 319.7 bits (818), Expect = 1.000e-83 Identity = 149/198 (75.25%), Postives = 164/198 (82.83%), Query Frame = 0 Query: 112 GGLLEKFGSPEIPLRLILVGHNPSAAAWRDGHYYSNPSNRMWRLLSGAGIIPANYTALDDDKCPATCGIGFTDLGHGIPGTDSSQFRPKVLHMWRESLYQRLRGHSDRAGAPPKIVAFTGKRQFKELFYDSPAYKKKGLISYGLQTMRPEGFPFTVEETQLFVLTSSSGAAAMSNEAREAPYKELAVLLQQFPWGAPP 310 GGL EK+G PE PLRL+LVGHNPSAAAWRDGHYYSNPSNRMW LL IIP YTA DDD+CP+TCGIGFTDLG+G PGTDSS F+ VLH WR SLYQRL H+ RAGAPPKIVAFTGKRQF+ELF+DS AYK ISYGLQ+ RP+GFPF +ET+LFVLTSSSGAAAMSN ARE PY+ELA LL+Q PW PP Sbjct: 195 GGLREKYGDPERPLRLVLVGHNPSAAAWRDGHYYSNPSNRMWSLLRNVKIIPEGYTAKDDDRCPSTCGIGFTDLGYGNPGTDSSNFKAPVLHAWRRSLYQRLLSHARRAGAPPKIVAFTGKRQFRELFFDSKAYKSIS-ISYGLQSARPDGFPFNADETKLFVLTSSSGAAAMSNAAREMPYQELAELLKQIPWEVPP 391
BLAST of NO07G01670 vs. NCBI_GenBank
Match: CBJ48449.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 216.1 bits (549), Expect = 1.600e-52 Identity = 113/241 (46.89%), Postives = 140/241 (58.09%), Query Frame = 0 Query: 113 GLLEKF---GSPEIPLRLILVGHNPSAAAWRDGHYYSNPSNRMWRLLSGAGIIPANYTALDDDKCPATCGIGFTDLGHGIPGTDSSQFRPKVLHMWRESLYQRLRGHSDRAGAP---------------------------------------------PKIVAFTGKRQFKELFYDSPAYK-------KKGLISYGLQ--TMRPEGFPFTVEETQLFVLTSSSGAAAMSNEAREAPYKEL 297 GL+EK+ G PE PLRLI+VGHNPS AW GHYY NPSNRMW+LLS AGIIP +TA +D+ CP T G+GFTD+G IPGT SS+F K LH WR Y RL H++RA A P+I+AF GKRQ++ELF+D+ A K G +GLQ +RP G+PF E T++FV+ SSSGAAAM+NEARE PY++L Sbjct: 66 GLVEKYRSPGEPEWPLRLIIVGHNPSEKAWELGHYYGNPSNRMWKLLSSAGIIPPGFTASNDEDCPITSGVGFTDVGFSIPGTVSSEFGKKELHSWRRGFYDRLTAHAERAAATVAASKSYPAEPATERGTDSTSAAGKGADQGVATAATIKAKIEDGCPRIIAFAGKRQWEELFFDASAKDKAKTKGGKTGPFRFGLQPADLRPPGWPFPAERTEMFVVPSSSGAAAMTNEARETPYRDL 306
BLAST of NO07G01670 vs. NCBI_GenBank
Match: XP_001703403.1 (predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 188.3 bits (477), Expect = 3.600e-44 Identity = 99/210 (47.14%), Postives = 123/210 (58.57%), Query Frame = 0 Query: 113 GLLEKFGSPEIPLRLILVGHNPSAAAWRDGHYYSNPSNRMWRLLSGAGIIPANYT--ALDDDKCPATCGIGFTDLGHGIPGTDSSQFRPKVLHMWRESLYQRLRGHSDRAG----------APPKIVAFTGKRQFKELFY--DSPAYKKKGLISYGLQTMRPEGFPFTVEETQLFVLTSSSGAAAMSNEAREAPYKELAVLLQQFPWGAP 309 G+ EK G + PLRL++VGHNPS AWR GHYYSNPSN +W LL GI P + DD PA G+GF D+G G+PGTDSS+F+ +V W Y RLR H RA P++VAFTGKRQ+ EL PA K + +G Q P G+P T+++V TS+SGAA M+ EARE PY +LA L Q PW P Sbjct: 118 GVPEKLG--DDPLRLVIVGHNPSEHAWRSGHYYSNPSNHLWPLLRRTGIAPPDRIRGPQDDGLMPAVAGVGFLDVGCGVPGTDSSRFKSEVFEGWSRGFYSRLRAHMRRAATSIGCRCGLCGAPRLVAFTGKRQYLELMNVGAGPARNKVKTVEFGRQAALPPGWPLP-PSTEVWVCTSTSGAAPMTREAREQPYVQLAERLAQLPWPLP 324
BLAST of NO07G01670 vs. NCBI_GenBank
Match: PNW85305.1 (hypothetical protein CHLRE_03g180100v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 188.3 bits (477), Expect = 3.600e-44 Identity = 99/210 (47.14%), Postives = 123/210 (58.57%), Query Frame = 0 Query: 113 GLLEKFGSPEIPLRLILVGHNPSAAAWRDGHYYSNPSNRMWRLLSGAGIIPANYT--ALDDDKCPATCGIGFTDLGHGIPGTDSSQFRPKVLHMWRESLYQRLRGHSDRAG----------APPKIVAFTGKRQFKELFY--DSPAYKKKGLISYGLQTMRPEGFPFTVEETQLFVLTSSSGAAAMSNEAREAPYKELAVLLQQFPWGAP 309 G+ EK G + PLRL++VGHNPS AWR GHYYSNPSN +W LL GI P + DD PA G+GF D+G G+PGTDSS+F+ +V W Y RLR H RA P++VAFTGKRQ+ EL PA K + +G Q P G+P T+++V TS+SGAA M+ EARE PY +LA L Q PW P Sbjct: 209 GVPEKLG--DDPLRLVIVGHNPSEHAWRSGHYYSNPSNHLWPLLRRTGIAPPDRIRGPQDDGLMPAVAGVGFLDVGCGVPGTDSSRFKSEVFEGWSRGFYSRLRAHMRRAATSIGCRCGLCGAPRLVAFTGKRQYLELMNVGAGPARNKVKTVEFGRQAALPPGWPLP-PSTEVWVCTSTSGAAPMTREAREQPYVQLAERLAQLPWPLP 415
BLAST of NO07G01670 vs. NCBI_GenBank
Match: XP_002946706.1 (hypothetical protein VOLCADRAFT_116135 [Volvox carteri f. nagariensis] >EFJ51932.1 hypothetical protein VOLCADRAFT_116135 [Volvox carteri f. nagariensis]) HSP 1 Score: 185.3 bits (469), Expect = 3.000e-43 Identity = 97/205 (47.32%), Postives = 124/205 (60.49%), Query Frame = 0 Query: 113 GLLEKFGSPEIPLRLILVGHNPSAAAWRDGHYYSNPSNRMWRLLSGAGIIPANYT-ALDDDKCPATCGIGFTDLGHGIPGTDSSQFRPKVLHMWRESLYQRLRGHSDRAGA----------PPKIVAFTGKRQFKELF-YDSPAYKKKGLISYGLQTMRPEGFPFTVEETQLFVLTSSSGAAAMSNEAREAPYKELAVLLQQFPW 306 G+ EK G + PLRLI+VGHNPSA AW+ GHYYSNPSN MWRLL GI P+ A DDD+ P G+GF D+G G PGTDSS F+ +V W + Y RLR H RA A P VAF+GKRQF EL D + + +G Q + P +PF T ++V +S+SGAAA++ + RE PY++LA L+ PW Sbjct: 72 GVPEKLG--DQPLRLIIVGHNPSAHAWQSGHYYSNPSNHMWRLLVATGIAPSWVRGAQDDDRLPGAVGVGFLDVGCGHPGTDSSSFKSEVFLSWSRAFYTRLRDHMARAAASIGCTCGCCGAPCFVAFSGKRQFLELLNVDRAPRDRVKTVEHGPQVLLPREWPFPRTRTAVWVCSSTSGAAALTRQQREEPYRQLAEKLKGVPW 274
BLAST of NO07G01670 vs. NCBI_GenBank
Match: KXZ56817.1 (hypothetical protein GPECTOR_1g736 [Gonium pectorale]) HSP 1 Score: 182.2 bits (461), Expect = 2.600e-42 Identity = 97/215 (45.12%), Postives = 127/215 (59.07%), Query Frame = 0 Query: 116 EKFGSPEIPLRLILVGHNPSAAAWRDGHYYSNPSNRMWRLLSGAGII-PANYTALDDDKCPATCGIGFTDLGHGIPGTDSSQFRPKVLHMWRESLYQRLRGHSDRAGA----------PPKIVAFTGKRQFKELFYDSPAYKKKG-LISYGLQTMRPEGFPFTVEETQLFVLTSSSGAAAMSNEAREAPYKELAVLL--QQFPWGAPPPTKTTRG 317 EK G + PLRL++VGHNPS AW+ GHYYSNPSN MWR+L GI P A DDD+ P G+GF D+G G PGTDSS F +V W + Y RL+ H RA A P++VAF+GKRQF EL + + + + +G Q+ P G+PF T+++V +S+SGAAAM+ E RE PYK LA L +++P PP G Sbjct: 43 EKLG--DAPLRLVIVGHNPSEHAWQSGHYYSNPSNLMWRILISTGIAPPGTRGAEDDDRLPREAGVGFLDVGCGHPGTDSSSFASEVFDAWSRAFYSRLKAHMARAAASIGCTCGLCGAPRLVAFSGKRQFLELLNVGRSGRDRAKTVEFGPQSELPRGWPFP-RSTEVWVCSSTSGAAAMTKEQREGPYKRLAERLAREEWPRRGPPACAAATG 254
BLAST of NO07G01670 vs. NCBI_GenBank
Match: PNH04627.1 (hypothetical protein TSOC_009204 [Tetrabaena socialis]) HSP 1 Score: 176.0 bits (445), Expect = 1.800e-40 Identity = 98/224 (43.75%), Postives = 124/224 (55.36%), Query Frame = 0 Query: 113 GLLEKFGSPEIPLRLILVGHNPSAAAWRDGHYYSNPSNRMWRLLSGAGIIPANYTA-LDDDKCPATCGIGFTDLGHGIPGTD-------------------SSQFRPKVLHMWRESLYQRLRGHSDRAGA----------PPKIVAFTGKRQFKELFYDSPAYKKKG-LISYGLQTMRPEGFPFTVEETQLFVLTSSSGAAAMSNEAREAPYKELAVLLQQFPW 306 G+ EK G + PLRL++VGHNPSA AW+ GHYYSNPSN MWR+L GI P DD PA G+GF D+G G PGTD SS+F+ V W + Y RLR H RA A P +VAF+GKRQF EL A +++ + +G Q P G+P TQ++V +S+SGAAAM+ E RE PY++LA L Q PW Sbjct: 184 GVPEKLG--DAPLRLVIVGHNPSAHAWQSGHYYSNPSNHMWRILIRTGIAPPGTRGPQDDGTLPAAAGVGFLDVGCGHPGTDRRGGGDYAFPAYSPPPRPRSSEFKSAVFERWARAFYTRLRDHMARAAASIGCTCGRCGAPCLVAFSGKRQFLELLNLGRAPRERAKTVEHGPQAALPSGWPLPA-ATQVWVCSSTSGAAAMTREQREGPYEQLAAALAQLPW 404
BLAST of NO07G01670 vs. NCBI_GenBank
Match: XP_005847338.1 (hypothetical protein CHLNCDRAFT_134530 [Chlorella variabilis] >EFN55236.1 hypothetical protein CHLNCDRAFT_134530 [Chlorella variabilis]) HSP 1 Score: 161.8 bits (408), Expect = 3.600e-36 Identity = 98/256 (38.28%), Postives = 130/256 (50.78%), Query Frame = 0 Query: 112 GGL-LEKFGSPEIPLRLILVGHNPSAAAWRDGHYYSNPSNRMWRLLSGAGIIP--ANYTALDDDKCPATCGIGFTDLGHGIPGTDSSQFRPKVLHMWRESLYQRLRGHSDRAGA----------PPKIVAFTGKRQFKELF-------------------------------------------------YDSPAYKKKGLISYGLQTMRPEGFPFTVEETQLFVLTSSSGAAAMSNEAREAPYKELAVLLQQFPW 306 GGL LEK G + PLRL++VGHNPS AW H+YSNP+N WR+L GI P A A DD K PA G+GFTD+G G PGTDSSQF + WR + YQR+ + RA A P IVAF+GKRQF+ELF + ++ + G Q + PEG+P + +T+++V+TS+SGAA M+ + R AP++ LA L+Q PW Sbjct: 70 GGLALEKMG--DAPLRLVIVGHNPSEHAWASSHFYSNPTNWFWRILRDTGIAPPAAISGAADDGKMPAVAGVGFTDVGSGAPGTDSSQFTAQDFEAWRPAFYQRMATQARRASAAIGCTCGACGAPCIVAFSGKRQFQELFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLQARRPRRVDTGRQWVLPEGWPLPL-DTEVWVMTSTSGAAPMTRQQRLAPWQALAERLRQEPW 322
BLAST of NO07G01670 vs. NCBI_GenBank
Match: XP_002905155.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY53537.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 159.8 bits (403), Expect = 1.400e-35 Identity = 86/194 (44.33%), Postives = 120/194 (61.86%), Query Frame = 0 Query: 121 PEIPLRLILVGHNPSAAAWRDGHYYSNPSNRMWRLLSGA-------GIIPANYTALDDDKCPATCGIGFTDLGHGIPGTDSSQFRPKVLHMWRESLYQRLRGHSDRAGAPPKIVAFTGKRQFKELFYDSPAYKKKGLISYGLQTMRPEGFPFTVE-ETQLFVLTSSSGAAAMSNEAREAPYKELAVLLQQFPWG 307 PE LRL++VGHNPS AW+ G+ YSNP+NRMW LL+G GI+P+ + + P G+GFT +G PG D+S++ + WR S +QRLR H+ P ++AF+GKRQF LF SPA K + SYG Q+ P G+P + +++++VL SSSG AAM+ R PY++LA L+Q PWG Sbjct: 49 PERRLRLLIVGHNPSDHAWKTGYSYSNPTNRMWMLLTGTLSPHSWEGIVPSTARIDEQNILPDVHGVGFTSIGLE-PGNDASKYGKATMEAWRTSFFQRLRRHA--LPHAPILIAFSGKRQFSYLF--SPALSK--IESYGKQSKLPPGWPHELRADSEVWVLPSSSGRAAMTTAQRTLPYQQLAERLRQIPWG 235
BLAST of NO07G01670 vs. NCBI_GenBank
Match: XP_002504840.1 (predicted protein [Micromonas commoda] >ACO66098.1 predicted protein [Micromonas commoda]) HSP 1 Score: 159.5 bits (402), Expect = 1.800e-35 Identity = 87/222 (39.19%), Postives = 118/222 (53.15%), Query Frame = 0 Query: 121 PEIPLRLILVGHNPSAAAWRDGHYYSNPSNRMWRLLSGAGIIPANYTALDDDKCPATCGIGFTDLGHGIPGTDSSQFRPKVLHMWRESLYQRLRGH----SDRAGAP-----------------PKIVAFTGKRQFKELFYDSPAYKKKGLISYGLQTMR--PEGFPFTVEETQLFVLTSSSGAAAMSNEAREAPYKELAVLLQQFPWGAPPPTKTTRGRNL 320 PE+PL+L+++GHNPS +W G YSNPSN W+LL+ I+P ++T D + P GIGFTD G +PG D+ + + WR LY RLRGH +D +G P +VAF+GKRQ+ +LF P+ + G Q P G+P E T+++V+ SSSG AAM+ EARE P+ EL L PW P RG L Sbjct: 89 PEVPLKLLIIGHNPSEHSWGSGWSYSNPSNNFWKLLAKGRIVPEDWTKEDCPRLPGDLGIGFTDAG-TVPGNDAGAYNRATMKKWRSDLYARLRGHVARCADASGDEDARVGHRSSMSIASRHGPDVVAFSGKRQYAQLFDAVPS-----RVDAGRQPPESLPPGWPLCPERTEVWVMPSSSGRAAMTREAREGPWVELGTRLATIPW----PRAEYRGAEL 300 The following BLAST results are available for this feature:
BLAST of NO07G01670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01670 ID=NO07G01670|Name=NO07G01670|organism=Nannochloropsis oceanica|type=gene|length=3063bpback to top protein sequence of NO07G01670.1 >NO07G01670.1-protein ID=NO07G01670.1-protein|Name=NO07G01670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=321bpback to top protein sequence of NO07G01670.2 >NO07G01670.2-protein ID=NO07G01670.2-protein|Name=NO07G01670.2|organism=Nannochloropsis oceanica|type=polypeptide|length=321bpback to top Synonyms
Publications
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