NO07G01090, NO07G01090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01090 vs. NCBI_GenBank
Match: EWM27261.1 (dead-box atp-dependent rna helicase [Nannochloropsis gaditana]) HSP 1 Score: 779.2 bits (2011), Expect = 8.400e-222 Identity = 385/400 (96.25%), Postives = 392/400 (98.00%), Query Frame = 0 Query: 168 VWGHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAISFVTQKHARISRELSKILEESGNVVPAALRNM-GGGGYGRGRY 567 V GHGIPKPVFTFEEASMPEYVLQEVMKQGFD PTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLE GDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDL+RGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQS+ARDFLKDPYQVTVGSLDL+ANKDIKQEVMVCEDRDKYGLLLRALKENNTGG++LVFVETKRGCDQLQRSL MDGF AVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYA+SFVTQKHARISREL+KILEESGN VPAALR M GGGGYGRGRY Sbjct: 90 VQGHGIPKPVFTFEEASMPEYVLQEVMKQGFDRPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLESGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLKRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSLARDFLKDPYQVTVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHARISRELAKILEESGNQVPAALRGMGGGGGYGRGRY 489
BLAST of NO07G01090 vs. NCBI_GenBank
Match: CBJ28373.1 (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 610.1 bits (1572), Expect = 6.800e-171 Identity = 300/386 (77.72%), Postives = 333/386 (86.27%), Query Frame = 0 Query: 168 VWGHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAISFVTQKHARISRELSKILEESGNVVPAAL 554 + G GIPKP TFEEASMPEYVL+EVMKQGF APTPIQSQGWPMALLGRDM+GISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLV+APTRELA+QIK+ECDKFGRSS IKNTCVYGGVPKR QV DL RG+EIV+ATPGRLID LESG TNLRRVTYLVLDEADRMLDMGFEPQ+R IVSQIRPDRQTLMWSATWPKEVQ++ARDFL YQVTVGSL+L+ANKDIKQ + ED +KY L + L+++ G++LVFVETK+GCD L RSL DG+QA IHGDK+Q++RD+ L+ FK G +LVATDVAARGLDVKDIQMV NFDFPNNMEDYIHR+GR GRAGAKG A+SF K++R REL KIL ES N VP L Sbjct: 116 IQGEGIPKPAMTFEEASMPEYVLREVMKQGFSAPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQQHGHNGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPEL 501
BLAST of NO07G01090 vs. NCBI_GenBank
Match: CBN73878.1 (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 599.4 bits (1544), Expect = 1.200e-167 Identity = 292/378 (77.25%), Postives = 332/378 (87.83%), Query Frame = 0 Query: 168 VWGHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAISFVTQKHARISRELSKILEES 546 + G GIPKPV TFEEASMPEYVL+EV+KQGF PTPIQSQGWPMALLGRDM+GISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLV+APTRELA+QIK+ECDKFG SS IKNTCVYGGVPKR QVYDL RG+EIV+ATPGRLID LESG TNLRRVTYLVLDEADRMLDMGFEPQ+RSIVSQIRPDRQTLMWSATWPKEV+ +ARDFL++ YQVTVGSL+LSANKDI+Q V + ED KY +L + L+E+N GR+L+FVETK+GCD L RSL +G+ A+AIHGDK+Q +RD L FKEGRS ILVATDVAARGLDVKDI+MV NFDFP ME Y+HR+GR GRAG KG AISF K+++ +REL +IL+++ Sbjct: 51 IQGDGIPKPVMTFEEASMPEYVLREVLKQGFPKPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKRSQVYDLSRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLELSANKDIQQVVEIVEDFGKYRVLAKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALAIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNSKCARELIRILKQA 428
BLAST of NO07G01090 vs. NCBI_GenBank
Match: XP_002294093.1 (atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335] >EED88448.1 atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 588.6 bits (1516), Expect = 2.100e-164 Identity = 292/397 (73.55%), Postives = 334/397 (84.13%), Query Frame = 0 Query: 170 GHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTG-GRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAIS-FVTQKHARISRELSKILEESGNVVPAALRN---MGGGGY 562 G GIPKP TFEEASMPEYVL EV+K GFD PTPIQSQGWPMAL G++M+GISATGSGKTLAFLLPAMIHINAQ YL+ G+GPIVLVLAPTRELA+QIK+ECDKFG SS IKNT VYGGVPK +QV LR G+EIV+ATPGRLIDHLE G TNL+RVTYLVLDEADRMLDMGFEPQLR IVSQIRPDRQ LMWSATWPKEVQ++ARD+L D YQVTVGSLDL+ NKD+ Q + VC D+DKY LLR L+EN T R+LVFVETK+GCD L RSL MDGFQA A+HGDKSQ++RDW LR+FK ++ +LVATDVAARGLDV DI+MV NFDFPN+ E YIHR+GRTGRAG KG+A+S FVT+K+ R++R++ +IL + VP L N GGG Y Sbjct: 61 GEGIPKPCMTFEEASMPEYVLSEVIKCGFDKPTPIQSQGWPMALKGKNMVGISATGSGKTLAFLLPAMIHINAQQYLKPGEGPIVLVLAPTRELAVQIKEECDKFGASSEIKNTVVYGGVPKSKQVRSLREGVEIVIATPGRLIDHLEQGNTNLKRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQVLMWSATWPKEVQNLARDYLSDFYQVTVGSLDLAGNKDVTQMIDVCSDQDKYRNLLRYLRENLTSKDRVLVFVETKKGCDMLTRSLRMDGFQARAMHGDKSQEERDWVLREFKSCQATLLVATDVAARGLDVDDIKMVVNFDFPNDTETYIHRIGRTGRAGKKGFAVSFFVTEKNGRMARDIIEILNRTQQNVPPELLNAVQTGGGRY 457
BLAST of NO07G01090 vs. NCBI_GenBank
Match: XP_002176921.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51384.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 579.3 bits (1492), Expect = 1.300e-161 Identity = 289/399 (72.43%), Postives = 329/399 (82.46%), Query Frame = 0 Query: 168 VWGHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKEN-NTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAIS-FVTQKHARISRELSKILEESGNVVPAALRNMGGGGYGRG 565 V GH +PKPV TF+EASMPEYVL EV+K GFD PTPIQSQGWPMAL GR+M+G+SATGSGKTLAFLLPAMIHINAQPYL+ GDGPIVLVLAPTRELA+QIK+ECDKFG SS IKNT VYGGV K Q+ +LR G EI +ATPGRLIDHLE G TNL+RVTYLVLDEADRMLDMGFEPQLR IVSQIRPDRQ LMWSATWPKEVQ++A D+L+D YQVTVGSLDLSANKD+ Q + VC D DKY L R L+EN + R+LVFVETK+GCD L RSL DGFQA A+HGDKSQ++RDW LR+FK +S +LVATDVAARGLDV DI++V NFDFP M+ YIHRVGRTGRAG KG+A+S FV K+AR++REL IL + VP L+ + GRG Sbjct: 120 VRGHDVPKPVMTFDEASMPEYVLNEVLKCGFDKPTPIQSQGWPMALKGRNMVGVSATGSGKTLAFLLPAMIHINAQPYLKPGDGPIVLVLAPTRELAVQIKEECDKFGSSSEIKNTVVYGGVKKHTQLRELRAGAEICIATPGRLIDHLEQGNTNLKRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQVLMWSATWPKEVQALANDYLQDFYQVTVGSLDLSANKDVTQIIEVCTDMDKYRNLQRYLRENLSPKDRVLVFVETKKGCDMLTRSLRSDGFQARAMHGDKSQEERDWALREFKGMQSTLLVATDVAARGLDVDDIRIVVNFDFPKEMDSYIHRVGRTGRAGKKGFAVSFFVPDKNARLARELVDILNRTSQNVPQELQALTSFSGGRG 518
BLAST of NO07G01090 vs. NCBI_GenBank
Match: OEU22687.1 (DEAD-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 571.2 bits (1471), Expect = 3.500e-159 Identity = 279/399 (69.92%), Postives = 328/399 (82.21%), Query Frame = 0 Query: 168 VWGHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNT-GGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAIS-FVTQKHARISRELSKILEESGNVVPAALRNMGGGGYGRG 565 V G +PKP TFEEASMPEY+L EV+K GF +PTPIQSQGWPMAL G++ +G+SATGSGKTLAFLLP MIHINAQPYL+ G+GPIVLV+APTRELA+QIK+ECDKFG+SS IKNT VYGGVPK +Q+ DL+ G EIV+ATPGRLIDHL+ G TNL+RVTYLVLDEADRMLDMGFEPQLR IVSQIRPDRQ LMWSATWPKE+Q +ARD+L + YQVTVGS DL+ NKD+ Q + VC+D DKY LLR L+EN T R+LVFVETK+GCD L RSL MDGFQA A+HGDKSQQ+RDW L +FK +S +L ATDVAARGLDV DI+MV NFD PNNMEDY+HR+GRTGRAG KG A+S FV +K+ R+++EL IL+ + +P L + GRG Sbjct: 25 VVGKDVPKPCLTFEEASMPEYILSEVLKCGFQSPTPIQSQGWPMALKGQNTVGVSATGSGKTLAFLLPGMIHINAQPYLKPGEGPIVLVVAPTRELAVQIKEECDKFGKSSDIKNTVVYGGVPKSKQIRDLQSGTEIVIATPGRLIDHLDQGNTNLKRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQVLMWSATWPKEIQGLARDYLGEYYQVTVGSQDLTGNKDVTQIIEVCQDPDKYRSLLRYLRENLTPKDRVLVFVETKKGCDMLTRSLRMDGFQARAMHGDKSQQERDWALGEFKNCQSTLLCATDVAARGLDVDDIKMVVNFDMPNNMEDYVHRIGRTGRAGKKGTAVSFFVGEKNGRMAKELMDILKRTDQNIPPELNALASFSGGRG 423
BLAST of NO07G01090 vs. NCBI_GenBank
Match: GAX14556.1 (ATP-dependent RNA helicase DDX5/DBP2 [Fistulifera solaris]) HSP 1 Score: 569.7 bits (1467), Expect = 1.000e-158 Identity = 285/412 (69.17%), Postives = 331/412 (80.34%), Query Frame = 0 Query: 167 AVWGHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKEN-NTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAIS-FVTQKHARISRELSKILEESGNVVPAALRNM----------GGGGYGRGRY 567 +V G +PKPV TF+EASMPEYVL EV+K GFD PTPIQSQGWPMAL GR+M+GISATGSGKTLAFLLPAM+HINAQ YL+ GDGPIVLVLAPTRELA+QIK+ECDKFG SS IKNT VYGGV K QV LR G+EI++ATPGRLIDHLE G TNLRRVTYLV+DEADRMLDMGFEPQ+R I SQIRPDRQ LMWSATWPKEVQ++A D+L+D YQVTVGSLDLS NK+I Q + VC D+DKY LLR L+EN + R+LVFVETK+GCD L RSL DG+ A A+HGDKSQ++RDWTLR+FK S +LVATDVAARGLDV DI++V NFDFP ME Y+HR+GRTGR G G A+S FV +K+ R++REL +IL+ + V+P L+ M GG G G RY Sbjct: 136 SVSGTDVPKPVMTFDEASMPEYVLTEVLKCGFDTPTPIQSQGWPMALKGRNMVGISATGSGKTLAFLLPAMVHINAQAYLKPGDGPIVLVLAPTRELAVQIKEECDKFGASSDIKNTVVYGGVKKGTQVQALRAGIEILIATPGRLIDHLEQGNTNLRRVTYLVMDEADRMLDMGFEPQIRKICSQIRPDRQVLMWSATWPKEVQALANDYLRDYYQVTVGSLDLSGNKNITQMIEVCTDQDKYRNLLRILRENYSAKDRVLVFVETKKGCDMLCRSLRADGYTARAMHGDKSQEERDWTLREFKNKNSTLLVATDVAARGLDVDDIRIVINFDFPKEMESYVHRIGRTGRGGKTGLAVSFFVAEKNGRLARELVEILKRTSQVIPPELQAMASFSSGAPKRGGRGGGGRRY 547
BLAST of NO07G01090 vs. NCBI_GenBank
Match: GAX22086.1 (ATP-dependent RNA helicase DDX5/DBP2 [Fistulifera solaris]) HSP 1 Score: 567.4 bits (1461), Expect = 5.000e-158 Identity = 283/409 (69.19%), Postives = 330/409 (80.68%), Query Frame = 0 Query: 167 AVWGHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKEN-NTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAIS-FVTQKHARISRELSKILEESGNVVPAALRNMGG--------GGYGRGR 566 +V G +PKPV TF+EASMPEYVL EV+K GF+ PTPIQSQGWPMAL GR+M+GISATGSGKTLAFLLPAM+HINAQ YL+ GDGPIVLVLAPTRELA+QIK+ECDKFG SS IKNT VYGGV K QV LR G+EI++ATPGRLIDHLE G TNLRRVTYLV+DEADRMLDMGFEPQ+R I SQIRPDRQ LMWSATWPKEVQ++A D+L+D YQVTVGSLDLS NK+I Q + VC D+DKY LLR L+EN + R+LVFVETK+GCD L RSL DG+ A A+HGDKSQ++RDWTLR+FK S +LVATDVAARGLDV DI++V NFDFP ME Y+HR+GRTGR G G A+S FV +K+ R++REL +IL+ + V+P L+ M GG G GR Sbjct: 147 SVSGMDVPKPVMTFDEASMPEYVLTEVLKCGFNTPTPIQSQGWPMALKGRNMVGISATGSGKTLAFLLPAMVHINAQAYLKPGDGPIVLVLAPTRELAVQIKEECDKFGASSDIKNTVVYGGVKKGTQVQALRAGIEILIATPGRLIDHLEQGNTNLRRVTYLVMDEADRMLDMGFEPQIRKICSQIRPDRQVLMWSATWPKEVQALANDYLRDYYQVTVGSLDLSGNKNITQMIEVCTDQDKYRNLLRILRENYSAKDRVLVFVETKKGCDMLCRSLRADGYTARAMHGDKSQEERDWTLREFKNKNSTLLVATDVAARGLDVDDIRIVINFDFPKEMESYVHRIGRTGRGGKTGLAVSFFVAEKNGRLARELVEILKRTSQVIPPELQAMASFSSGAPKRGGRGGGR 555
BLAST of NO07G01090 vs. NCBI_GenBank
Match: XP_008867623.1 (hypothetical protein H310_04867 [Aphanomyces invadans] >ETW03394.1 hypothetical protein H310_04867 [Aphanomyces invadans]) HSP 1 Score: 556.6 bits (1433), Expect = 8.900e-155 Identity = 269/394 (68.27%), Postives = 321/394 (81.47%), Query Frame = 0 Query: 167 AVWGHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAISFVTQKHARISRELSKILEESGNVVPAALRNMGGGG 561 +V G G+PK V TFEEAS P+YVL EV++ GF +PTPIQ QGWPMAL GRDM+GISATGSGKTLAFLLPA++HINAQPYL+ GDGPIVLV+APTRELA+QIKQECDKFG SS IKNTCVYGGVPKR Q+ DL RG+EI + TPGR+ID L TNLRRVTYLVLDEADRMLDMGFEPQLR IVSQIRPDRQTLMWSATWPKE+ S+A DFL D QVTVGSL+L+ANK+I Q V V D DKYG L+ L++ GGR+++F ETKRG D+L R+L + AIHG+KSQ++RDW L++FKEG++ ILVATDVA+RGLD+KDI+ V NFD P N+EDYIHR+GRT RAG KG A+S+ T ++ RI+ ++ +IL E+G VP L N+ G G Sbjct: 121 SVNGKGVPKHVETFEEASFPQYVLDEVVRLGFASPTPIQCQGWPMALSGRDMVGISATGSGKTLAFLLPAIVHINAQPYLQPGDGPIVLVIAPTRELAVQIKQECDKFGSSSKIKNTCVYGGVPKRGQIEDLSRGVEICICTPGRMIDLLNINKTNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEIVSLAHDFLNDFIQVTVGSLELTANKNITQVVKVMTDMDKYGALMDLLRDVYEGGRIIIFCETKRGADELCRNLKGTRYATRAIHGNKSQEERDWVLKEFKEGKAQILVATDVASRGLDIKDIRYVINFDMPKNIEDYIHRIGRTARAGMKGTAVSYFTAENGRIAGDMIRILSEAGQEVPRELENLRGYG 514
BLAST of NO07G01090 vs. NCBI_GenBank
Match: XP_009040608.1 (hypothetical protein AURANDRAFT_70381 [Aureococcus anophagefferens] >EGB04694.1 hypothetical protein AURANDRAFT_70381 [Aureococcus anophagefferens]) HSP 1 Score: 555.1 bits (1429), Expect = 2.600e-154 Identity = 282/404 (69.80%), Postives = 322/404 (79.70%), Query Frame = 0 Query: 170 GHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARG---LDVK-DIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAISFVTQKHARISRELSKILEESGNVVPAALRNMGGGG------YGR 564 G G+PKPV TFEEASMP+YVL EVMKQGF P+PIQ+QGWPMALLGRDMIGIS TGSGKTLAFLLP MIHINAQPYL+ GDGPIVLVLAPTRELA+QIK ECDKFG SS IKNTCVYGG PKR Q DL+RG+EIV+ATPGRLID LESG+TNLRRVTYLVLDEADRMLDMGFEPQLR IVSQIRPDRQTLMWSATWPKEV++MA DFLKD YQVTVGSL+LSANKDI Q V +D KY + LKE+ +M+VFVETKRGCDQL RSL+ +GF A IHGDK+Q +RDW L +F+ G+ +LVATD A R L + +MV NFDFP+N+EDY+HR+GR GRAG KG A+SF TQK ++ + L KIL ++G +P L+ M G YGR Sbjct: 141 GRGVPKPVSTFEEASMPDYVLTEVMKQGFKEPSPIQAQGWPMALLGRDMIGISRTGSGKTLAFLLPGMIHINAQPYLQPGDGPIVLVLAPTRELAVQIKVECDKFGASSQIKNTCVYGGAPKRTQTGDLQRGVEIVIATPGRLIDFLESGVTNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVRNMANDFLKDFYQVTVGSLELSANKDITQYVECVDDGAKYRRMTDFLKEHGV-DKMIVFVETKRGCDQLSRSLAHEGFPARCIHGDKAQDERDWVLNEFRSGKCPLLVATDRAPRARARLTARLRRRMVVNFDFPSNLEDYVHRIGRCGRAGQKGTALSFFTQKSSKWASGLCKILGDAGQKIPPELQQMQSYGXXXXXRYGR 543 The following BLAST results are available for this feature:
BLAST of NO07G01090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01090 ID=NO07G01090|Name=NO07G01090|organism=Nannochloropsis oceanica|type=gene|length=4521bpback to top protein sequence of NO07G01090.1 >NO07G01090.1-protein ID=NO07G01090.1-protein|Name=NO07G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=567bpback to top Synonyms
Publications
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