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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr7 | genome | chr7:355587..360107 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO07G01090.1 vs.
Match: EWM27261.1 (dead-box atp-dependent rna helicase [Nannochloropsis gaditana]) HSP 1 Score: 778.9 bits (2010), Expect = 1.100e-221 Identity = 386/403 (95.78%), Postives = 393/403 (97.52%), Query Frame = 0
Query: 165 VWAVWGHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAISFVTQKHARISRELSKILEESGNVVPAALRNM-GGGGYGRGRY 567
V V GHGIPKPVFTFEEASMPEYVLQEVMKQGFD PTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLE GDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDL+RGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQS+ARDFLKDPYQVTVGSLDL+ANKDIKQEVMVCEDRDKYGLLLRALKENNTGG++LVFVETKRGCDQLQRSL MDGF AVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYA+SFVTQKHARISREL+KILEESGN VPAALR M GGGGYGRGRY
Sbjct: 87 VITVQGHGIPKPVFTFEEASMPEYVLQEVMKQGFDRPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLESGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLKRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSLARDFLKDPYQVTVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHARISRELAKILEESGNQVPAALRGMGGGGGYGRGRY 489
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G01090.1 ID=NO07G01090.1|Name=NO07G01090.1|organism=Nannochloropsis oceanica|type=mRNA|length=1701bp ATGATTAAGGCGCCATCGGGATCATCCTTACGACTGGACGTGGCGGAAAG CAACCATCTCTGTGCGAATGAGAATCAGGAGCCACGCGTGTTCTGCCACC AGAGCAAGTGGCGCCACACATGTCTCGACTCATCCTTAAGCAGCTTATTT TACCGACGGCGTCACATTGTGACCTCCATGTCGTCCTCGCCCAGCCTGGC CTCCTCCTACCCCATCGACCATCGATCCTGTGTCCCACGTCGTCCTCATT CCCATTCCTCCGCCCCCTCCTCGCCACGAATCACAGAAACTTACATCAAG CGAATCCAAGCGAAACCAGTATGTCTTACGGCTCTTACGGCGGCGGCGGT GGATCTCGGGGTGGTGGCGGCTACGGCGGCGGCGGCAGCTATGGTGGTGG CGGCAGTGGTTACGGCAGCTACGGCGGGGGCGGCGGGGGCGGCTACGGTG GTGGCGGCGGCGGCTTTGGTGGCGGCCGTGGGGGTGGTGATCGTATGGGC GGTCTGGGGGCATGGGATCCCTAAGCCTGTGTTTACATTTGAAGAGGCGT CCATGCCCGAATACGTGCTGCAGGAGGTTATGAAGCAGGGATTTGACGCG CCCACCCCTATCCAGAGCCAAGGATGGCCCATGGCGTTGTTGGGCCGGGA CATGATTGGGATCTCGGCGACAGGGTCGGGGAAGACATTGGCGTTCTTGC TGCCGGCCATGATTCACATTAATGCTCAGCCTTACCTTGAACAAGGGGAT GGACCCATCGTCCTCGTCCTGGCCCCGACCCGCGAGCTCGCCCTGCAGAT CAAGCAGGAATGTGACAAATTTGGAAGGAGTTCGTCGATCAAAAATACGT GTGTCTACGGTGGAGTGCCCAAGCGGGAGCAGGTCTATGATTTACGCCGG GGGATGGAGATCGTGGTGGCGACGCCGGGGCGATTGATCGACCATTTGGA ATCAGGCATGACCAACCTGCGCAGGGTCACCTACTTGGTGCTGGACGAGG CGGACCGGATGCTCGACATGGGTTTCGAACCCCAGCTTCGTTCCATCGTC TCCCAGATCCGCCCCGACCGACAAACACTCATGTGGTCCGCCACCTGGCC CAAGGAAGTGCAGAGCATGGCCCGCGACTTCCTCAAGGACCCTTATCAGG TGACCGTCGGCTCGCTGGACCTGAGTGCCAACAAAGACATCAAGCAAGAG GTGATGGTGTGTGAGGACCGGGACAAGTACGGCTTGCTGTTGCGGGCGCT CAAGGAGAACAATACGGGAGGCCGTATGCTTGTATTCGTGGAGACCAAGC GCGGATGTGATCAGCTACAGCGTTCTTTGTCGATGGACGGCTTCCAGGCG GTGGCGATCCACGGAGACAAAAGTCAGCAGGACCGTGATTGGACACTCAG ACAGTTTAAGGAAGGAAGGAGTAACATCCTGGTGGCGACGGACGTAGCGG CCCGTGGGTTGGACGTGAAGGACATTCAGATGGTGGCCAATTTTGATTTC CCGAACAATATGGAGGATTATATTCATCGGGTGGGGCGGACGGGGAGGGC GGGGGCGAAGGGGTATGCGATTTCGTTTGTCACGCAAAAACATGCTCGGA TCTCGCGGGAGTTGAGCAAGATTTTGGAGGAGAGTGGCAATGTTGTCCCT GCGGCATTAAGGAACATGGGTGGAGGGGGATACGGTCGTGGGCGCTACTA A back to topprotein sequence of NO07G01090.1 >NO07G01090.1-protein ID=NO07G01090.1-protein|Name=NO07G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=567bp MIKAPSGSSLRLDVAESNHLCANENQEPRVFCHQSKWRHTCLDSSLSSLF YRRRHIVTSMSSSPSLASSYPIDHRSCVPRRPHSHSSAPSSPRITETYIK RIQAKPVCLTALTAAAVDLGVVAATAAAAAMVVAAVVTAATAGAAGAATV VAAAALVAAVGVVIVWAVWGHGIPKPVFTFEEASMPEYVLQEVMKQGFDA PTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGD GPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRR GMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIV SQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQE VMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQA VAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDF PNNMEDYIHRVGRTGRAGAKGYAISFVTQKHARISRELSKILEESGNVVP AALRNMGGGGYGRGRY* back to topmRNA from alignment at chr7:355587..360107- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G01090.1 ID=NO07G01090.1|Name=NO07G01090.1|organism=Nannochloropsis oceanica|type=mRNA|length=4521bp|location=Sequence derived from alignment at chr7:355587..360107- (Nannochloropsis oceanica) ATGATTAAGGCGCCATCGGGATCATCCTTACGACTGGACGTGGCGGAAAG
CAACCATCTCTGTGCGAATGAGAATCAGGAGCCACGCGTGTTCTGCCACC
AGAGCAAGTGGCGCCACACATGTCTCGACTCATCCTTAAGCAGCTTATTT
TACCGACGGCGTCACATTGTGACCTCCATGTCGTCCTCGCCCAGCCTGGC
CTCCTCCTACCCCATCGACCATCGATCCTGTGTCCCACGTCGTCCTCATT
CCCATTCCTCCGCCCCCTCCTCGCCACGAATCACAGAAACTTACATCAAG
CGAATCCAAGCGAAACCAGTATGTCTTACGGCTCTTACGGCGGCGGCGGT
GGATCTCGGGGTGGTGGCGGGTACGTCCAATGTCTTGACTTTCTTTCCCT
CCCATTCGCAGGGTTCTTCGATTCCATGGCCCACTCATTTTCCTAAACAC
GCCCTTTTTGTTCCCCACACGCATATGCGTATGCACTTGTGTCCTCATTC
CTTTCCGTTTACTCATTAGCAATGACGGTGGCAGATGCATGGGCGGATTT
GAATTCTGTATGTCTATCACGATGGTCTCTCGCGGCATCACATAAACCCT
CTCCAAACCTCAAATCTCATCCACCCTTTCACTTTCTCTTTACGCGCACG
TGTGACCTTTGCTCATTCTCTTTCTCTTCCTTCCAGCTACGGCGGCGGCG
GCAGGTACGTTTCATTGCACTTATCTATCTACCTAGCTCAAGGTAGTTGT
ATGCGTGCTCGTGTGCCAGCCCGACTGCCTACCCCAATCTTGTATGCGTG
CTCGTGTGCCAGCCCGACTGCCTACCCCAATCTTCTTCCTTTGATCAACG
TCCTCACCTCCCCTCTTCCACGCGCACACACGCTTTGAATATGATCGGCA
TGCCTTTTCTCCTCTCTCTCACACATTAGCTATGGTGGTGGCGGCAGTGG
TTACGGCAGGTATGGTGCGCTCTTTCGCGTGTCTTATTGTGCTTGTGCCT
GTATGTGCATTCATCCGTGTCACTGACAGGAATCAAACTACGTATTGTAT
GTGTCACCTCACACAATTTTCTTTTCATCCCACACACAACGCCATATTTC
AACTCTCATTTTCCTCTCCTACACTCGCCCTCATATTCCCTTCTCTCTTC
CTTACGAAATCAATAGCTACGGCGGGGGCGGCGGGGGCGGCTACGGTGGT
GGCGGCGGCGGCTTTGGTGGCGGCCGTGGGGGTGGTGATCGTATGGGCGG
TCTGGGTGCGGGTCTGAGAAGCATACACTGGGACCTGAATAAACTCCCTC
CCTTCGAGAAAAACTTTTACATCGAGCACCCCGACGTGACGAAACGAGAG
GAGACCGAGGCGGCACGCTGGAGGACGAAGCATGGCATTACCGTGCAGGG
GCATGGGATCCCTAAGCCTGTGTTTACATTTGAAGAGGCGTCCATGCCCG
AATACGTGCTGCAGGAGGTTATGAAGCAGGGATTTGACGCGCCCACCCCT
ATCCAGAGCCAAGGATGGCCCATGGCGTTGTTGGGCCGGGACATGATTGG
GATCTCGGCGACAGGGTCGGGGAAGACATTGGCGTTCTTGCTGCCGGCCA
TGATTCACATTAATGCTCAGGTGCACATTTTTTCTTTTTCTACATTTGAT
TTTGAGGAATACAGTAATATTAGGTGTAGGAGTAGTAGGAAATGTAGTGT
TACTAAGGGCAGAAGAATTACGTGGTCGGGAGGGGGAGGTGGAGGAGGAA
GAGGTTAGTGGTTTGAGAGTTCGGGGGGAGAGATACACGCGCGTGTGTAT
GATGACTGGAAGGCAAGTCGTTCTCTCATTAGGGCACGCCTCTCTCTACC
CTTCCCCTTTTGCTGGATAAGAAGGGAGGGACGGGATACCGCACGCGGGA
GAAGCAGTGCGACCGAAAGCACGCGCATTTTAAAACGAGAGGCCTCTTCG
GTGAATCCTTCCCTCTTTTTTTACTCTCTTTGTGCATGAGGGCTAAGGGA
AGGACAGGCTCACACAAAAAGCAGGCACACGTCGTGGGACAGGAGAGAGG
ATCGAATTGTGGGGGGAACATGAGGCCAACGGTAGGGGATGGGGTTGGGT
TGGAAACTTCCTCCCTTTCCTCTCTCTTCCCTATCATCTCTTTTCCTCCT
CTCCTTCCTTCAGGGCAGAGCCACTGAAAATGAAATTGAAGGCTCTGTCT
AGGTCAAAGGCTGGGGCGGCGGCGACGCCCACAGCGCCGCCTCCGCCGCT
TCCTCCTCCTCTTGTTGTTGGAGCCCTTGCTGCGGGTGCCGTTGGCGAAA
GCTGGTGGCCACAAGCATTGGCGTGGCTATCTATCGCTTCCTCCACATGC
AACCCAAGCCACAGAAACGCCAATCATGGTCATCCTTGTCCTCTTCCTCA
TCCTGCTCTCCTCTCTCACACAGTACGTACCGCGTGATTCTGCTCGTTGC
TCGTCCTTTTCTTTTCGTTGTTGAATAATTTGTCTCTTCTCTTCCTCCCT
GTCTCTTTCTTGAAGGGCGGGAGAATAAAGAAAAGACATTGAAAAAATGA
CAAAAAGGAAGGATAAAAGACGAAAAGTTCACACCAACGGTACAAGCTCC
GAAAGAGAAAGATGAGCTTTTAAGGCGCTGGAAAGAGACGACGAAGGAGG
ATGTTGTGGTGTTTGGGCCTTTCGTATTTTGAATTGGAATCGAAGCGATG
CGCACGAATGATATTCAAAGGAAGAATAGAACCTGTCGTCACTCACAGTG
TGGTGAATGTATGGCAGTGACGGTGCTGACGCGCATATCCATGTGTTAGT
GTGTGAGGCCACGAGATGCATTCCCTATGATCATTTCGGGAATGACATGC
GAGACATGTGGGCGTGTCTAGGATGTGCGTGAATGTGGATAGTTAAATAA
TAAAGGCTTTATATATAAGTGTGTGTGTGGGTGTGTGCATATGTGTGTGT
GTATGTATGTGTGTGTATATGTGTGTATGTATGTATACATATATGTGTGT
GTGCAAGTGCTTTGGTCTTCGCTTTGTGCGACAAAGGATGGCATTATCCC
TATTAACCCTAACCTTAACCCTATATCTATATACGTATGTACCTCGCTTT
TCTTCGGATCTTAAGTCTTTTTTTCCCTCTGCCTCCATCAAATACTTCTT
TACCCCCCTCCCTCCTTCCCGTGCGCCGTCGAATCACCTGACGACTTACT
CATTGTCATCCCCTACCCTCACTGCGTTAATATGATGGGAAACGAAGGTA
CAGAATCTTGATACTTTTCTACCGAATCTTCTCAACTCTCTCTCCCTCCC
TTCTTCCCTCCCTCCCTACCCCCGCTTCCCCCAGCCTTACCTTGAACAAG
GGGATGGACCCATCGTCCTCGTCCTGGCCCCGACCCGCGAGCTCGCCCTG
CAGATCAAGCAGGAATGTGACAAATTTGGAAGGAGTTCGTCGATCAAAAA
TACGTGTGTCTACGGTGGAGTGCCCAAGCGGGAGCAGGTCTATGATTTAC
GCCGGGGGATGGAGATCGTGGTGGCGACGCCGGGGCGATTGATCGACCAT
TTGGAATCAGGTAAGCTATTGATTCGGCTTTTACCTGCATCCATTCGCCT
CCATAAATCCTCATCATTCCTTAATTCACGGTTCCCTCTTCTGAAAGGCA
TGACCAACCTGCGCAGGGTCACCTACTTGGTGCTGGACGAGGCGGACCGG
ATGCTCGACATGGGTTTCGAACCCCAGCTTCGTTCCATCGTCTCCCAGAT
CCGCCCCGACCGACAAACACTCATGTGGTGAGCTACGCCCCATCTCCCCC
TATCCCTCTCCTGCCTAACCTCTCCAGCCCCAGCTATCTTCATTTCACCC
TTACCTCTCTTCTCTCGTCCCCCCTCTCTTTTTACCTCCCTTCTTCGCAC
CCTAGGTCCGCCACCTGGCCCAAGGAAGTGCAGAGCATGGCCCGCGACTT
CCTCAAGGACCCTTATCAGGTGACCGTCGGCTCGCTGGACCTGAGTGCCA
ACAAAGACATCAAGCAAGAGGTGATGGTGTGTGAGGACCGGGACAAGTAC
GGCTTGCTGTTGCGGGCGCTCAAGGAGAACAATACGGGAGGCCGTATGCT
TGTATTCGTGGAGACCAAGCGCGGATGTGATCAGCTACAGCGTTCTTTGT
CGATGGACGGCTTCCAGGCGGTGGCGATCCACGGAGACAAAAGTCAGCAG
GACCGTGATTGGACACTCAGACAGTTTAAGGAAGGAAGGAGTAACATCCT
GGTGGCGACGGACGTAGCGGCCCGTGGGTTGGACGTGAAGGACATTCAGA
TGGTGGCCAATTTTGATTTCCCGAACAATATGGAGGATTATATTCATCGG
GTGGGGCGGACGGGGAGGGCGGGGGCGAAGGGGTATGCGATTTCGTTTGT
CACGCAAAAACATGCTCGGATCTCGCGGGAGTTGAGCAAGATTTTGGAGG
AGAGTGGCAATGTTGTCCCTGCGGCATTAAGGAACATGGGTGGAGGGGGA
TACGGTCGTGGGCGCTACTAA back to topCoding sequence (CDS) from alignment at chr7:355587..360107- >NO07G01090.1 ID=NO07G01090.1|Name=NO07G01090.1|organism=Nannochloropsis oceanica|type=CDS|length=1701bp|location=Sequence derived from alignment at chr7:355587..360107- (Nannochloropsis oceanica) ATGATTAAGGCGCCATCGGGATCATCCTTACGACTGGACGTGGCGGAAAG CAACCATCTCTGTGCGAATGAGAATCAGGAGCCACGCGTGTTCTGCCACC AGAGCAAGTGGCGCCACACATGTCTCGACTCATCCTTAAGCAGCTTATTT TACCGACGGCGTCACATTGTGACCTCCATGTCGTCCTCGCCCAGCCTGGC CTCCTCCTACCCCATCGACCATCGATCCTGTGTCCCACGTCGTCCTCATT CCCATTCCTCCGCCCCCTCCTCGCCACGAATCACAGAAACTTACATCAAG CGAATCCAAGCGAAACCAGTATGTCTTACGGCTCTTACGGCGGCGGCGGT GGATCTCGGGGTGGTGGCGGCTACGGCGGCGGCGGCAGCTATGGTGGTGG CGGCAGTGGTTACGGCAGCTACGGCGGGGGCGGCGGGGGCGGCTACGGTG GTGGCGGCGGCGGCTTTGGTGGCGGCCGTGGGGGTGGTGATCGTATGGGC GGTCTGGGGGCATGGGATCCCTAAGCCTGTGTTTACATTTGAAGAGGCGT CCATGCCCGAATACGTGCTGCAGGAGGTTATGAAGCAGGGATTTGACGCG CCCACCCCTATCCAGAGCCAAGGATGGCCCATGGCGTTGTTGGGCCGGGA CATGATTGGGATCTCGGCGACAGGGTCGGGGAAGACATTGGCGTTCTTGC TGCCGGCCATGATTCACATTAATGCTCAGCCTTACCTTGAACAAGGGGAT GGACCCATCGTCCTCGTCCTGGCCCCGACCCGCGAGCTCGCCCTGCAGAT CAAGCAGGAATGTGACAAATTTGGAAGGAGTTCGTCGATCAAAAATACGT GTGTCTACGGTGGAGTGCCCAAGCGGGAGCAGGTCTATGATTTACGCCGG GGGATGGAGATCGTGGTGGCGACGCCGGGGCGATTGATCGACCATTTGGA ATCAGGCATGACCAACCTGCGCAGGGTCACCTACTTGGTGCTGGACGAGG CGGACCGGATGCTCGACATGGGTTTCGAACCCCAGCTTCGTTCCATCGTC TCCCAGATCCGCCCCGACCGACAAACACTCATGTGGTCCGCCACCTGGCC CAAGGAAGTGCAGAGCATGGCCCGCGACTTCCTCAAGGACCCTTATCAGG TGACCGTCGGCTCGCTGGACCTGAGTGCCAACAAAGACATCAAGCAAGAG GTGATGGTGTGTGAGGACCGGGACAAGTACGGCTTGCTGTTGCGGGCGCT CAAGGAGAACAATACGGGAGGCCGTATGCTTGTATTCGTGGAGACCAAGC GCGGATGTGATCAGCTACAGCGTTCTTTGTCGATGGACGGCTTCCAGGCG GTGGCGATCCACGGAGACAAAAGTCAGCAGGACCGTGATTGGACACTCAG ACAGTTTAAGGAAGGAAGGAGTAACATCCTGGTGGCGACGGACGTAGCGG CCCGTGGGTTGGACGTGAAGGACATTCAGATGGTGGCCAATTTTGATTTC CCGAACAATATGGAGGATTATATTCATCGGGTGGGGCGGACGGGGAGGGC GGGGGCGAAGGGGTATGCGATTTCGTTTGTCACGCAAAAACATGCTCGGA TCTCGCGGGAGTTGAGCAAGATTTTGGAGGAGAGTGGCAATGTTGTCCCT GCGGCATTAAGGAACATGGGTGGAGGGGGATACGGTCGTGGGCGCTACTA A back to top
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