NO07G00750, NO07G00750 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO07G00750 vs. NCBI_GenBank
Match: EWM27328.1 (hypothetical protein Naga_100393g5 [Nannochloropsis gaditana]) HSP 1 Score: 271.2 bits (692), Expect = 4.600e-69 Identity = 169/349 (48.42%), Postives = 215/349 (61.60%), Query Frame = 0 Query: 1 MVKRCWMLPTAAAVVVSTFLLSSTPAPAEAFLPPV-PAPPAHFAAIPSSISVLSS--RARLGAVQMIRPAGLQSSLLNRFRSKPSASPDRPGVGPPRXXXXXXXXXXXXXXXXXXXVRGSSIAGSMKGSDEAGQMVDKAAGLGQKLSRFTAAVLEEEGDEESA-----RVLKTMKGIPDNFLKSSIPADEENIRGASAVVGALAGFVLGGPLLALIGASWTSYSCTVAQSDAGEAARGTGQWALNLHNFVAKVNRKKSFVQKLSLSLGGLYRRFRKEVAPEASVLDKAEASLQSTLDFTGRISQEFDLPGVVGKAVVKTGELSVVAVKSLVKYNDENKVTDKLWAWVRK 342 MV RCW LP A A+ LL P AFL P+ PA A + +S A+ ++M+ P+ Q+S L R RS+ S D+P V P R S G +K SD M Q+LSRFTAAV+EEE SA R LKT+KGIPD FLK I A++ +R ASAVVGALAGF LGGPLLAL+GA+WTSYSCTV SDAGEAARGTG+WALN+HNF+AK+NRK +VQKLS LGG YRRFRKE AP+A+ LD AE+S+QS L+ T ++ ++ D+ G V KA++K GE S ++SL++ N+EN+VT++LW V K Sbjct: 1 MVNRCWTLPMAMAIFAPVLLLGGIPL-TNAFLHPLRPAKTDSLLAPSQRHAAISGPMYAQRDVMKMVNPSEWQASWLQRIRSRVSPPVDKPSVSPV-PSQKEKKEQTPAKAASTSNSRSSPTVG-VKNSDAKVPMPP------QQLSRFTAAVIEEESAHASAVEAEKRELKTLKGIPDTFLKDDIVANDNTVRQASAVVGALAGFALGGPLLALVGAAWTSYSCTVTPSDAGEAARGTGKWALNVHNFMAKMNRKHGYVQKLSQGLGGWYRRFRKETAPDATFLDVAESSVQSALEATDQLRKDLDVAGPVEKALIKGGEWSAGGLRSLIRLNEENRVTERLWEVVAK 340
BLAST of NO07G00750 vs. NCBI_GenBank
Match: EWM30517.1 (hypothetical protein Naga_100013g33 [Nannochloropsis gaditana]) HSP 1 Score: 77.8 bits (190), Expect = 7.400e-11 Identity = 54/171 (31.58%), Postives = 85/171 (49.71%), Query Frame = 0 Query: 178 IPADEENIRGASAVVGALAGFVLGGPLLALIGASWTSYSCTVAQSDAGEAARGTGQWALNLHNFVAKVNRKKSFVQKLSLSLGGLYRRFRKEVAPEASVLDKAEASLQSTLDFTGRISQEFDLPGVVGKAVVKTGELSVVAVKSLVKYNDENKVTDKLWAWVRKEVLKEKK 349 +P + + I ++A+VG AG V GP+L ++ T+Y+ +D GEAARG G+ AL + N++ K+N K K+S S L + KE E SV+ K E + +ST + QE+DL AV T + S A+ ++ N+ +K V K K+ Sbjct: 61 VPVNPQTIETSAAIVGTSAGIVFLGPVLGIVLGLLTNYAAK-TDNDVGEAARGVGKTALEVFNYIVKINSKYQIGTKVSNSASSLVSKL-KENDGEDSVVAKLEETFESTKTKLSDLDQEYDLVSKAKSAVGLTVDFSNSAIDKALELNEXXXXXXXXXXXXKKAVNKAKE 229
BLAST of NO07G00750 vs. NCBI_GenBank
Match: CBJ33389.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 70.5 bits (171), Expect = 1.200e-8 Identity = 46/167 (27.54%), Postives = 80/167 (47.90%), Query Frame = 0 Query: 177 SIPADEENIRGASAVVGALAGFVLGGPLLALIGASWTSYSCTVAQSDAGEAARGTGQWALNLHNFVAKVNRKKSFVQKLSLSLGGLYRRFRKEVAPEASVLDKAEASLQSTLDFTGRISQEFDLPGVVGKAVVKTGELSVVAVKSLVKYNDENKVTDKLWAWVRKEV 344 ++ + EN ++ V+G LAGF +GGP+LA + A +Y + +++AG A RG A+ NF+ +N K K L K + E +++ ++S E+DLP +A+ GEL+ A+ ++ E KVTDK+ ++K + Sbjct: 18 TVAVNTENTEFSAGVLGGLAGFFVGGPVLAAVLAVAANYG-SKQENEAGVAVRGVSANAIEAFNFLTTLNSKYDVTGKAGAQLDKAVTEL-KSTGEAGDTIXXVEKTVKDLTSQATKLSSEYDLPAKAKQALGVAGELADTAIVKGIELEKEYKVTDKVKDSIKKSI 182
BLAST of NO07G00750 vs. NCBI_GenBank
Match: XP_002176613.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51076.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 65.9 bits (159), Expect = 2.900e-7 Identity = 42/170 (24.71%), Postives = 80/170 (47.06%), Query Frame = 0 Query: 179 PADEENIRGASAVVGALAGFVLGGPLLALIGASWTSYSCTVAQSDAGEAARGTGQWALNLHNFVAKVNRKKSFVQKLSLSLGGLYRRFRKEVAPEASVLDKAEASLQSTLDFTGRISQEFDLPGVVGKAVVKTGELSVVAVKSLVKYNDENKVTDKLWAWVRKEVLKEKK 349 P EE + + ++G AGF++GGP++ I A+ +Y+ + D + + + + ++N+ A ++ K ++K SL G + + + + + K E +L +T I+ E+DL G A+ G+L +K K+TDK A + V K K+ Sbjct: 68 PIKEETVEFTAGILGGAAGFLVGGPVVGAITAAAANYASKM-DGDVPDIVQAVSKTGIQIYNYFATLDEKYEILKKAQDSLQGTLDKLKAQETVDKEAIAKVEKALSNTKSKIEEINDEYDLVGGGLTALGVVGDLVEKTIKKAGXXXXXXKLTDKAMASINSAVTKAKE 236 The following BLAST results are available for this feature:
BLAST of NO07G00750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G00750 ID=NO07G00750|Name=NO07G00750|organism=Nannochloropsis oceanica|type=gene|length=1047bpback to top protein sequence of NO07G00750.1 >NO07G00750.1-protein ID=NO07G00750.1-protein|Name=NO07G00750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=349bpback to top Synonyms
Publications
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