NO07G00750.1, NO07G00750.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G00750.1
Unique NameNO07G00750.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1047
Alignment locationchr7:255467..256513 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:255467..256513 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO07G00750.1 vs.
Match: EWM27328.1 (hypothetical protein Naga_100393g5 [Nannochloropsis gaditana])

HSP 1 Score: 288.1 bits (736), Expect = 3.600e-74
Identity = 176/349 (50.43%), Postives = 227/349 (65.04%), Query Frame = 0 
Query:    1 MVKRCWMLPTAAAVVVSTFLLSSTPAPAEAFLPPVPAPPAHFAAIPSSISVLSSR---ARLGAVQMIRPAGLQSSLLNRFRSKPSASPDRPGVGPPRNNKDEDEKTKKQAAATSSSVRGSSIAGSMKGSDEAGQMVDKAAGLGQKLSRFTAAVLEEEGDEESA-----RVLKTMKGIPDNFLKSSIPADEENIRGASAVVGALAGFVLGGPLLALIGASWTSYSCTVAQSDAGEAARGTGQWALNLHNFVAKVNRKKSFVQKLSLSLGGLYRRFRKEVAPEASVLDKAEASLQSTLDFTGRISQEFDLPGVVGKAVVKTGELSVVAVKSLVKYNDENKVTDKLWAWVRK 342
            MV RCW LP A A+     LL   P    AFL P+          PS      S    A+   ++M+ P+  Q+S L R RS+ S   D+P V P  + K++ E+T  +AA+TS+S R S   G +K SD    M        Q+LSRFTAAV+EEE    SA     R LKT+KGIPD FLK  I A++  +R ASAVVGALAGF LGGPLLAL+GA+WTSYSCTV  SDAGEAARGTG+WALN+HNF+AK+NRK  +VQKLS  LGG YRRFRKE AP+A+ LD AE+S+QS L+ T ++ ++ D+ G V KA++K GE S   ++SL++ N+EN+VT++LW  V K
Sbjct:    1 MVNRCWTLPMAMAIFAPVLLLGGIPL-TNAFLHPLRPAKTDSLLAPSQRHAAISGPMYAQRDVMKMVNPSEWQASWLQRIRSRVSPPVDKPSVSPVPSQKEKKEQTPAKAASTSNS-RSSPTVG-VKNSDAKVPMPP------QQLSRFTAAVIEEESAHASAVEAEKRELKTLKGIPDTFLKDDIVANDNTVRQASAVVGALAGFALGGPLLALVGAAWTSYSCTVTPSDAGEAARGTGKWALNVHNFMAKMNRKHGYVQKLSQGLGGWYRRFRKETAPDATFLDVAESSVQSALEATDQLRKDLDVAGPVEKALIKGGEWSAGGLRSLIRLNEENRVTERLWEVVAK 340
The following BLAST results are available for this feature:
BLAST of NO07G00750.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27328.13.600e-7450.43hypothetical protein Naga_100393g5 [Nannochloropsi... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G00750NO07G00750Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G00750.1NO07G00750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G00750.1.cds1NO07G00750.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G00750.1 ID=NO07G00750.1|Name=NO07G00750.1|organism=Nannochloropsis oceanica|type=mRNA|length=1047bp
ATGGTGAAGCGGTGCTGGATGCTGCCTACGGCAGCGGCTGTCGTCGTTTC
TACCTTCTTGCTGAGCAGCACTCCCGCTCCCGCGGAAGCATTTCTCCCGC
CCGTTCCGGCCCCCCCCGCTCATTTTGCTGCCATTCCCTCTTCTATCTCC
GTCCTCTCTTCCCGTGCTCGGCTTGGGGCGGTGCAAATGATCAGACCGGC
GGGTTTGCAATCGTCGTTGTTGAATCGGTTTCGGTCGAAGCCTAGTGCGT
CGCCCGACAGGCCCGGTGTCGGACCACCACGGAACAACAAGGATGAGGAC
GAGAAGACCAAGAAGCAAGCGGCAGCGACAAGTAGCAGCGTTCGCGGGTC
GAGCATTGCAGGCAGTATGAAAGGCAGTGACGAAGCCGGTCAAATGGTTG
ATAAGGCTGCAGGGCTGGGGCAAAAGCTAAGTCGGTTCACTGCGGCGGTC
CTTGAGGAAGAGGGTGACGAGGAGAGCGCGAGGGTTTTGAAAACTATGAA
GGGCATCCCAGACAATTTTCTCAAGAGCTCCATCCCTGCTGACGAGGAAA
ATATACGAGGAGCTTCGGCTGTTGTGGGTGCACTCGCGGGCTTTGTCTTG
GGTGGGCCTCTCTTGGCCCTGATAGGGGCGTCGTGGACGAGTTATTCCTG
CACGGTCGCTCAGTCAGACGCGGGAGAAGCAGCGCGAGGCACAGGGCAAT
GGGCGCTAAACTTGCACAATTTCGTGGCGAAGGTCAATCGGAAAAAATCC
TTCGTCCAGAAGTTGTCTTTGTCATTGGGTGGATTGTACCGGCGGTTTAG
AAAGGAGGTGGCTCCCGAGGCAAGTGTACTTGACAAGGCTGAGGCTTCCT
TGCAATCGACCCTGGATTTCACGGGAAGGATCAGCCAGGAATTTGATTTG
CCAGGCGTGGTGGGAAAGGCTGTCGTGAAGACGGGAGAGTTGAGTGTGGT
GGCGGTGAAGAGCTTAGTGAAATACAATGACGAGAATAAGGTGACGGATA
AGTTGTGGGCCTGGGTGCGGAAGGAGGTGTTGAAGGAGAAAAAGTAG
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protein sequence of NO07G00750.1

>NO07G00750.1-protein ID=NO07G00750.1-protein|Name=NO07G00750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=349bp
MVKRCWMLPTAAAVVVSTFLLSSTPAPAEAFLPPVPAPPAHFAAIPSSIS
VLSSRARLGAVQMIRPAGLQSSLLNRFRSKPSASPDRPGVGPPRNNKDED
EKTKKQAAATSSSVRGSSIAGSMKGSDEAGQMVDKAAGLGQKLSRFTAAV
LEEEGDEESARVLKTMKGIPDNFLKSSIPADEENIRGASAVVGALAGFVL
GGPLLALIGASWTSYSCTVAQSDAGEAARGTGQWALNLHNFVAKVNRKKS
FVQKLSLSLGGLYRRFRKEVAPEASVLDKAEASLQSTLDFTGRISQEFDL
PGVVGKAVVKTGELSVVAVKSLVKYNDENKVTDKLWAWVRKEVLKEKK*
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mRNA from alignment at chr7:255467..256513+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G00750.1 ID=NO07G00750.1|Name=NO07G00750.1|organism=Nannochloropsis oceanica|type=mRNA|length=1047bp|location=Sequence derived from alignment at chr7:255467..256513+ (Nannochloropsis oceanica)
ATGGTGAAGCGGTGCTGGATGCTGCCTACGGCAGCGGCTGTCGTCGTTTC
TACCTTCTTGCTGAGCAGCACTCCCGCTCCCGCGGAAGCATTTCTCCCGC
CCGTTCCGGCCCCCCCCGCTCATTTTGCTGCCATTCCCTCTTCTATCTCC
GTCCTCTCTTCCCGTGCTCGGCTTGGGGCGGTGCAAATGATCAGACCGGC
GGGTTTGCAATCGTCGTTGTTGAATCGGTTTCGGTCGAAGCCTAGTGCGT
CGCCCGACAGGCCCGGTGTCGGACCACCACGGAACAACAAGGATGAGGAC
GAGAAGACCAAGAAGCAAGCGGCAGCGACAAGTAGCAGCGTTCGCGGGTC
GAGCATTGCAGGCAGTATGAAAGGCAGTGACGAAGCCGGTCAAATGGTTG
ATAAGGCTGCAGGGCTGGGGCAAAAGCTAAGTCGGTTCACTGCGGCGGTC
CTTGAGGAAGAGGGTGACGAGGAGAGCGCGAGGGTTTTGAAAACTATGAA
GGGCATCCCAGACAATTTTCTCAAGAGCTCCATCCCTGCTGACGAGGAAA
ATATACGAGGAGCTTCGGCTGTTGTGGGTGCACTCGCGGGCTTTGTCTTG
GGTGGGCCTCTCTTGGCCCTGATAGGGGCGTCGTGGACGAGTTATTCCTG
CACGGTCGCTCAGTCAGACGCGGGAGAAGCAGCGCGAGGCACAGGGCAAT
GGGCGCTAAACTTGCACAATTTCGTGGCGAAGGTCAATCGGAAAAAATCC
TTCGTCCAGAAGTTGTCTTTGTCATTGGGTGGATTGTACCGGCGGTTTAG
AAAGGAGGTGGCTCCCGAGGCAAGTGTACTTGACAAGGCTGAGGCTTCCT
TGCAATCGACCCTGGATTTCACGGGAAGGATCAGCCAGGAATTTGATTTG
CCAGGCGTGGTGGGAAAGGCTGTCGTGAAGACGGGAGAGTTGAGTGTGGT
GGCGGTGAAGAGCTTAGTGAAATACAATGACGAGAATAAGGTGACGGATA
AGTTGTGGGCCTGGGTGCGGAAGGAGGTGTTGAAGGAGAAAAAGTAG
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Coding sequence (CDS) from alignment at chr7:255467..256513+

>NO07G00750.1 ID=NO07G00750.1|Name=NO07G00750.1|organism=Nannochloropsis oceanica|type=CDS|length=1047bp|location=Sequence derived from alignment at chr7:255467..256513+ (Nannochloropsis oceanica)
ATGGTGAAGCGGTGCTGGATGCTGCCTACGGCAGCGGCTGTCGTCGTTTC
TACCTTCTTGCTGAGCAGCACTCCCGCTCCCGCGGAAGCATTTCTCCCGC
CCGTTCCGGCCCCCCCCGCTCATTTTGCTGCCATTCCCTCTTCTATCTCC
GTCCTCTCTTCCCGTGCTCGGCTTGGGGCGGTGCAAATGATCAGACCGGC
GGGTTTGCAATCGTCGTTGTTGAATCGGTTTCGGTCGAAGCCTAGTGCGT
CGCCCGACAGGCCCGGTGTCGGACCACCACGGAACAACAAGGATGAGGAC
GAGAAGACCAAGAAGCAAGCGGCAGCGACAAGTAGCAGCGTTCGCGGGTC
GAGCATTGCAGGCAGTATGAAAGGCAGTGACGAAGCCGGTCAAATGGTTG
ATAAGGCTGCAGGGCTGGGGCAAAAGCTAAGTCGGTTCACTGCGGCGGTC
CTTGAGGAAGAGGGTGACGAGGAGAGCGCGAGGGTTTTGAAAACTATGAA
GGGCATCCCAGACAATTTTCTCAAGAGCTCCATCCCTGCTGACGAGGAAA
ATATACGAGGAGCTTCGGCTGTTGTGGGTGCACTCGCGGGCTTTGTCTTG
GGTGGGCCTCTCTTGGCCCTGATAGGGGCGTCGTGGACGAGTTATTCCTG
CACGGTCGCTCAGTCAGACGCGGGAGAAGCAGCGCGAGGCACAGGGCAAT
GGGCGCTAAACTTGCACAATTTCGTGGCGAAGGTCAATCGGAAAAAATCC
TTCGTCCAGAAGTTGTCTTTGTCATTGGGTGGATTGTACCGGCGGTTTAG
AAAGGAGGTGGCTCCCGAGGCAAGTGTACTTGACAAGGCTGAGGCTTCCT
TGCAATCGACCCTGGATTTCACGGGAAGGATCAGCCAGGAATTTGATTTG
CCAGGCGTGGTGGGAAAGGCTGTCGTGAAGACGGGAGAGTTGAGTGTGGT
GGCGGTGAAGAGCTTAGTGAAATACAATGACGAGAATAAGGTGACGGATA
AGTTGTGGGCCTGGGTGCGGAAGGAGGTGTTGAAGGAGAAAAAGTAG
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Synonyms
Publications