NO06G04620, NO06G04620 (gene) Nannochloropsis oceanica

Overview
NameNO06G04620
Unique NameNO06G04620
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4923
Alignment locationchr6:1325199..1330121 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1325199..1330121 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G04620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR049ncniR049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G04620.1NO06G04620.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G04620.1NO06G04620.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G04620 ID=NO06G04620|Name=NO06G04620|organism=Nannochloropsis oceanica|type=gene|length=4923bp
TTTCGAACGTTGTAATCTTTTTCTTTTTTGGGGGGTTCACACATCCCTCC
TCCTATCGAGAGCGCGATGTACTGCTGACCGTCAGGAAAACCCGGGGACC
TGACATTGGCGGAGGATGAAAGGTACACCCTGGGTGTCGTCGTTGGTGTC
CATGTTCATGCTGGGAAGGCGGACAAATTGACCCACATGGCTCCCCGTCA
GAATTTTGGCCTCGATGACGCGAGGAGAAAGATGCAGGATGAGCAAACGT
GTCTCATTTGCAAGGCCTTGAACCGGGTCTGCGTTCCGCAACAGGATGAC
AGGTATGCCCACTTTTAGCCGTAGTTGGTGCAGGGCGAAGCCGGGCGGGT
TCTTGGAGTTTAAGAGCTCCGTGGGGTAAGCACCCTCGTTCTCGTCCTGC
TCCAGCCTGTCTGCTGAGGGGGGAATGGGGTCGCTGTTGAGCTCTGGCGG
AGGATGCATGAAGGGGGGCAGGAGGTATTCCAACTGAGGTGAAGGCAGAG
ACGGGGTGGCATATGGGCTACCTACAGTTGAAGTGGGTATAGGGGTGCCC
GTCCATCCCCGACCGCGAGGAGGAGGTCCGCAATCAATTGGAGGAGGGTA
GCATCCTGGCCCGCGTCATGCGCCGAACGAGTACGCATGTTTTCCTTAAG
GGTAAGGACGCGGAAAGTTGTCAGAGAGGGCTGCAAATCAGAGAAACGCG
CACGGTAGCATTTGGGTCGTCGTCTCGGATCACTGGGTGGATTTGGCAGA
GATCCCCCCAAAGAACAACGACTTTTCCACCGAGCGGAATATGTGCAAGG
TCCGGGTGAGCCATGAAGGCCATTCGCAGTGCTTCATCGAGGGCCTCGAG
GTTGCCCTGGTGCAGCAAAGAGGTCCCGTCAATGAGGATGAGGCGAGTGG
CAAGGAATATGCAACCTCTCTCATTGTTGGGCGTGTTGTCGCACGATTGG
CCGATGGCCGTGTCCCGTGGGGGCCTGCACCTGGAGTGGAATGTGGCCCC
GCCCTCCATGAACAACGCCGCGATGCCTGAGGCGGCCATCGTAAGAGCAT
TGGCGCCGCAAGAGCATTGGCGCCTTGGAACCAGACCTGGTTCAGGAGCA
CTTGATTCAGGTGCGTCTTGCCACATCCCTATTGGCTTATCTCGTCCGAC
ATTACGTTATTCTGCCAATCTACCTAAAGTGTTTATCGATTTTTTGTGTC
TGTCGCGCACTCAAAACGATGGTTCTCCGCGTTCTTCTCTTTCCACAAAC
CACTGAAGCACATGCACGCTTACCGAAACACATGTAGAAAAATACAATGC
ACAAACCTCTATGCAGTCTTTGTGACGTCGTCCTGTGGTTTGTGTGGTTT
TGAGCTTCCCTTGCCTCAATTTGGAGTGTTCCGCGTCCCACGGGTCCACA
AATAATCGTTTCCTTTCCAATTGATGATGACGCATTCAAAATATGGGCAT
TGGCCATGGACCTCGCATCCTTCACCAAGTGGGATGCGTCTTGATTCAGC
ATCATCATCACCGCTCCTCACTCAGAGCACCGCACCACTATGCCTTTTGT
GCACCTGGGCTGGGGCATGAATGGTGGTCAAGACGACGAGAACGGCCATg
taagtggtaacgagcatgacgagaatgatgctcagcagtgagtgccatct
tcgacaagcatattttgacagccaattcatgaacagcgacgatgattaca
cacacacagCCATGTGGAGTCGCAGGCCAGGGCCGGGGCCGGGGTCGGGG
CCGAGGCCGAGGCAGGGGGTTACCGCGTTATAATTCTGTCCGGAGGCCAC
GCAACCAAGTCGAGCGAGAAGCTGACAGACAGGGCTGATTAAGCCGACGC
ATTTGTGCAGGCTCGCCACCCATCCGGAGTGTTTCTCATCTATACCCCTG
GGAGATGTGGCAAGACGCACCTGAATCAAGTGCTCCTGAACCAGGTCTGG
TTCCAAGGCGCCAATGCTCTTGCGATGGCCGCCTCAGGCATCGCGGCGTT
GCTCATGGAGGGTGGGGCCACATTCCACTCCAGGTGCAAGCCCCCACGGG
ACACGGCCATCGGCCAATCGTGCGACAACACGCCCAACAATGAGAGAGGT
TGCATATTCCTTGCCACTCGCCTCATCCTCATTGACGAGACCTGTATTAA
TACTTGCTCATAGACTGCATTGAATGTGGCAAGTGCGGGAGGGGGCTGGC
CGTGGAGAGGAGAGTGGGTGACCATCATGGTGATATTGGTGGGGTCTCCT
ACTCTCGAAAGTGCGACGTACAGTTGACCTTGAGCAATAACCGGGGACGG
CAAGTAAATTGCGACTTTGGGAAGGTCTGTTCCTAAGATTTGTTTATAGT
GATGGCGAAGGCAGGCCGGACCGGGCACTAACGTCGGCGGAGAATGACTT
GATTGCGTGGCCTCCACCCAGAATTATTACGCGGGCGCCTGTGCCCCGGC
CCCGGCCTCGGCCCCGGCCCTAGCCTGCGACTCCACATGGCTGAGATTGT
ACTGCATCATTCTCGCCGTTCGTGGATTGGCTGCCAAAATTTGTCGCACG
TTGAAGACGGCACCCACGACCCAACTGCTGCGCCTCATTCTCGTCTTGTT
CGTTACCACTTGCATGACCTTTCTCATTGTCTTGACCACCATTCATTCCC
CCGCCCTAGTGGTCAATGGTCATGGCGGTGCTGTGCTGTGAGCAAATGTG
GGAGAGTGGGAGAATGGCGTCGAACTGTGTTGCGAGGGGGAGCGGTCTGG
GCGATGGCCCATAGCAAATGACCATATTTTGAATTCGTCGTCATCAATAC
CAACCTCGACCCTTCCACCCCCTATAAACATGGAGAAGAGCAAAGAAGGG
AGCAATACTACTCAGTGCATGGTCAGCAAATCGGAGTACACTCTTATTAT
GCTTATCTCATTCGTGAGGGGTTGAGGAGGGGTTGAGGGAAGAGAAAGGT
GACCCGAGGGGAGTTGGAGAGGGAGTGATGATTTGTGGACCCGCGGGCTG
CGGACCACTCCACATTGAGGAATTTTTGTCTGTCTGTTTGTCTGTCTGTC
GCGCACTTAAAACGATGATTTTCCGCGTTCTTCTCTTTCCACAAACCACC
AACGCACATGCATGCTAAGCAATATACTTGAAGCAATATACAATGCAAAA
GATTCTATGCAGTCTTTGTGACATCGTCCCGTGGTTTGTGTGCTTTTGAG
CTTCCCGTCCCTCAATTTGGAGTGTTCCGCAGCCCGCGGGTCCACAAATC
ATCACTCCTTCTCCAACTCCCCTCGGGTCACCTTCCTCTTCCTTCAACCC
CTCACAAAAGAAATAAGCATTATAACGGCGCACATCCATTTGCTGACCAT
GCACTAGGTGTAAAGCATTGCTCCCTTCTTTGCTCTTTTCCATGTTTATT
GAGGGTGGAGGGTGGCATTAATGATGACACATTCCAAATATGGGCGTTGG
CGATAAGCCATCCCCCAGACCGCTTTCCCTTGCAACACAGCTGAACACCA
TCCCCCTACTCTCCCACCCCGGCTAGCACCGCCATGTCTATTGTGCACCT
GGGCGGGGGGCATGAATGGCGGTGAAGGCTGCCGCTTGGGGCAACATTTC
AGAATGCCTTCGCGTCCATTTAGGGTACAATCGCCTCGCCCTTTCCACCA
AAGTCGCTCAAGCTCTCCCTGACCTGGACAAACTGTAGCGCGACACCTTC
GACTCCGTCACTGAGGCCATTGCACGGTGGCCGTACGCGCCGCAAGAAGC
CGACGTATTTTGTGCAGGTTAGCCACCCATCCGGAGTGTTTTCCCGGACC
TTGCACATATTCCGCTCGGTGGAAAAGTCGTTGTTCTTTGGGGGGATCTC
TGTCAAATCCACCCAGTGGTCCGAGACGACGACCCAAATGCTACCGTGCG
CGCTTCCCTGATTTGCAGCCTACTCTGTCAACGTGTCCCCGTCCTTATCC
TGGAGGAAAACATGCGTATTTGTGAAGCATATGATGCGAACCAGGATGCT
GTCCTCCTCCAATTGATTGCAGATCTTCTTCTCGAGGTCGGAAAAGGACG
AGCACTCCTACTCCCTCCAACTGTAGGTAGCCCCCATGCCACTCCGCCTC
CGCCTCCACATCCGTTGGAATACGTCCTGTCCCCCTTCATGCATTTTACC
AGAGCTCAACAACGACTCCATTCGGCTCCTCGACCACGTCTGCGGGGATT
TCAATGACGCGCGGAGTACAACGGAGAAACTCTCATTGAGGCGCTATTCT
CATCCCCAAGAACCAGCACTCCTTCCACGTTTTAGACATGTCTTATCCCT
CTCGATAGCAGATAAGAGCTGACTTGAAGAGCCACTCTTCCTCTTGCTTG
TGCTCTTGCGCATAATAAACGAGGAAATTCCCCTCGCTCATTCTCGCCCT
TGACGTCAACCTCCCAATGCGCGCTGCCTCGTCAACTCCGTGATTTGAGC
CAGCCGGAAACTACCACGGCATGTCCAGTTCTTGGGCTTGTCCTCCGAAT
ATGCTTTGCGCTGGTCCACGTCCGCTAGCATCAGCATTCAATCGTCCACC
TTGAATTTGGCCGTCACAGCCCACCCCCGCTCGAAGGTGGAGCCAAAGGT
GATGCGCTTTTCCTGGATAGCAGGAACGAATTTCTGCAGGTCTGTCCACT
ATTCGTTTCCCTCCTCTATGATAAGTCCGACGCCACAAGCTCGCACTTAT
CATATTCCATGTTTCTGCAACGCTGGCACGTGCAGGAGGTGGGAAATATC
AAAACGTACCCACCGCACGTCACAAAGCTATGATGAGACTTGATCCCCGC
CATATCCCTCACCACATCCTTGTCCACACCCACCAACTCCACAAATACGA
AGGTGCGGGAATTCGCCTTCAGCTGGATGCCCGTCTCCGCCTCCCACTCC
TCGCTGTCGTGGTACTATTTGTG
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protein sequence of NO06G04620.1

>NO06G04620.1-protein ID=NO06G04620.1-protein|Name=NO06G04620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=148bp
MKAIRSASSRASRLPWCSKEVPSMRMRRVARNMQPLSLLGVLSHDWPMAV
SRGGLHLEWNVAPPSMNNAAMPEAAIVRALAPQEHWRLGTRPGSGALDSG
ASCHIPIGLSRPTLRYSANLPKVFIDFLCLSRTQNDGSPRSSLSTNH*
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Synonyms
Publications