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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr6 | genome | chr6:1325199..1330121 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO06G04620.1 ID=NO06G04620.1|Name=NO06G04620.1|organism=Nannochloropsis oceanica|type=mRNA|length=4813bp
TTTCGAACGTTGTAATCTTTTTCTTTTTTGGGGGGTTCACACATCCCTCC
TCCTATCGAGAGCGCGATGTACTGCTGACCGTCAGGAAAACCCGGGGACC
TGACATTGGCGGAGGATGAAAGGTACACCCTGGGTGTCGTCGTTGGTGTC
CATGTTCATGCTGGGAAGGCGGACAAATTGACCCACATGGCTCCCCGTCA
GAATTTTGGCCTCGATGACGCGAGGAGAAAGATGCAGGATGAGCAAACGT
GTCTCATTTGCAAGGCCTTGAACCGGGTCTGCGTTCCGCAACAGGATGAC
AGGTATGCCCACTTTTAGCCGTAGTTGGTGCAGGGCGAAGCCGGGCGGGT
TCTTGGAGTTTAAGAGCTCCGTGGGGTAAGCACCCTCGTTCTCGTCCTGC
TCCAGCCTGTCTGCTGAGGGGGGAATGGGGTCGCTGTTGAGCTCTGGCGG
AGGATGCATGAAGGGGGGCAGGAGGTATTCCAACTGAGGTGAAGGCAGAG
ACGGGGTGGCATATGGGCTACCTACAGTTGAAGTGGGTATAGGGGTGCCC
GTCCATCCCCGACCGCGAGGAGGAGGTCCGCAATCAATTGGAGGAGGGTA
GCATCCTGGCCCGCGTCATGCGCCGAACGAGTACGCATGTTTTCCTTAAG
GGTAAGGACGCGGAAAGTTGTCAGAGAGGGCTGCAAATCAGAGAAACGCG
CACGGTAGCATTTGGGTCGTCGTCTCGGATCACTGGGTGGATTTGGCAGA
GATCCCCCCAAAGAACAACGACTTTTCCACCGAGCGGAATATGTGCAAGG
TCCGGGTGAGCCATGAAGGCCATTCGCAGTGCTTCATCGAGGGCCTCGAG
GTTGCCCTGGTGCAGCAAAGAGGTCCCGTCAATGAGGATGAGGCGAGTGG
CAAGGAATATGCAACCTCTCTCATTGTTGGGCGTGTTGTCGCACGATTGG
CCGATGGCCGTGTCCCGTGGGGGCCTGCACCTGGAGTGGAATGTGGCCCC
GCCCTCCATGAACAACGCCGCGATGCCTGAGGCGGCCATCGTAAGAGCAT
TGGCGCCGCAAGAGCATTGGCGCCTTGGAACCAGACCTGGTTCAGGAGCA
CTTGATTCAGGTGCGTCTTGCCACATCCCTATTGGCTTATCTCGTCCGAC
ATTACGTTATTCTGCCAATCTACCTAAAGTGTTTATCGATTTTTTGTGTC
TGTCGCGCACTCAAAACGATGGTTCTCCGCGTTCTTCTCTTTCCACAAAC
CACTGAAGCACATGCACGCTTACCGAAACACATGTAGAAAAATACAATGC
ACAAACCTCTATGCAGTCTTTGTGACGTCGTCCTGTGGTTTGTGTGGTTT
TGAGCTTCCCTTGCCTCAATTTGGAGTGTTCCGCGTCCCACGGGTCCACA
AATAATCGTTTCCTTTCCAATTGATGATGACGCATTCAAAATATGGGCAT
TGGCCATGGACCTCGCATCCTTCACCAAGTGGGATGCGTCTTGATTCAGC
ATCATCATCACCGCTCCTCACTCAGAGCACCGCACCACTATGCCTTTTGT
GCACCTGGGCTGGGGCATGAATGGTGGTCAAGACGACGAGAACGGCCATC
CATGTGGAGTCGCAGGCCAGGGCCGGGGCCGGGGTCGGGGCCGAGGCCGA
GGCAGGGGGTTACCGCGTTATAATTCTGTCCGGAGGCCACGCAACCAAGT
CGAGCGAGAAGCTGACAGACAGGGCTGATTAAGCCGACGCATTTGTGCAG
GCTCGCCACCCATCCGGAGTGTTTCTCATCTATACCCCTGGGAGATGTGG
CAAGACGCACCTGAATCAAGTGCTCCTGAACCAGGTCTGGTTCCAAGGCG
CCAATGCTCTTGCGATGGCCGCCTCAGGCATCGCGGCGTTGCTCATGGAG
GGTGGGGCCACATTCCACTCCAGGTGCAAGCCCCCACGGGACACGGCCAT
CGGCCAATCGTGCGACAACACGCCCAACAATGAGAGAGGTTGCATATTCC
TTGCCACTCGCCTCATCCTCATTGACGAGACCTGTATTAATACTTGCTCA
TAGACTGCATTGAATGTGGCAAGTGCGGGAGGGGGCTGGCCGTGGAGAGG
AGAGTGGGTGACCATCATGGTGATATTGGTGGGGTCTCCTACTCTCGAAA
GTGCGACGTACAGTTGACCTTGAGCAATAACCGGGGACGGCAAGTAAATT
GCGACTTTGGGAAGGTCTGTTCCTAAGATTTGTTTATAGTGATGGCGAAG
GCAGGCCGGACCGGGCACTAACGTCGGCGGAGAATGACTTGATTGCGTGG
CCTCCACCCAGAATTATTACGCGGGCGCCTGTGCCCCGGCCCCGGCCTCG
GCCCCGGCCCTAGCCTGCGACTCCACATGGCTGAGATTGTACTGCATCAT
TCTCGCCGTTCGTGGATTGGCTGCCAAAATTTGTCGCACGTTGAAGACGG
CACCCACGACCCAACTGCTGCGCCTCATTCTCGTCTTGTTCGTTACCACT
TGCATGACCTTTCTCATTGTCTTGACCACCATTCATTCCCCCGCCCTAGT
GGTCAATGGTCATGGCGGTGCTGTGCTGTGAGCAAATGTGGGAGAGTGGG
AGAATGGCGTCGAACTGTGTTGCGAGGGGGAGCGGTCTGGGCGATGGCCC
ATAGCAAATGACCATATTTTGAATTCGTCGTCATCAATACCAACCTCGAC
CCTTCCACCCCCTATAAACATGGAGAAGAGCAAAGAAGGGAGCAATACTA
CTCAGTGCATGGTCAGCAAATCGGAGTACACTCTTATTATGCTTATCTCA
TTCGTGAGGGGTTGAGGAGGGGTTGAGGGAAGAGAAAGGTGACCCGAGGG
GAGTTGGAGAGGGAGTGATGATTTGTGGACCCGCGGGCTGCGGACCACTC
CACATTGAGGAATTTTTGTCTGTCTGTTTGTCTGTCTGTCGCGCACTTAA
AACGATGATTTTCCGCGTTCTTCTCTTTCCACAAACCACCAACGCACATG
CATGCTAAGCAATATACTTGAAGCAATATACAATGCAAAAGATTCTATGC
AGTCTTTGTGACATCGTCCCGTGGTTTGTGTGCTTTTGAGCTTCCCGTCC
CTCAATTTGGAGTGTTCCGCAGCCCGCGGGTCCACAAATCATCACTCCTT
CTCCAACTCCCCTCGGGTCACCTTCCTCTTCCTTCAACCCCTCACAAAAG
AAATAAGCATTATAACGGCGCACATCCATTTGCTGACCATGCACTAGGTG
TAAAGCATTGCTCCCTTCTTTGCTCTTTTCCATGTTTATTGAGGGTGGAG
GGTGGCATTAATGATGACACATTCCAAATATGGGCGTTGGCGATAAGCCA
TCCCCCAGACCGCTTTCCCTTGCAACACAGCTGAACACCATCCCCCTACT
CTCCCACCCCGGCTAGCACCGCCATGTCTATTGTGCACCTGGGCGGGGGG
CATGAATGGCGGTGAAGGCTGCCGCTTGGGGCAACATTTCAGAATGCCTT
CGCGTCCATTTAGGGTACAATCGCCTCGCCCTTTCCACCAAAGTCGCTCA
AGCTCTCCCTGACCTGGACAAACTGTAGCGCGACACCTTCGACTCCGTCA
CTGAGGCCATTGCACGGTGGCCGTACGCGCCGCAAGAAGCCGACGTATTT
TGTGCAGGTTAGCCACCCATCCGGAGTGTTTTCCCGGACCTTGCACATAT
TCCGCTCGGTGGAAAAGTCGTTGTTCTTTGGGGGGATCTCTGTCAAATCC
ACCCAGTGGTCCGAGACGACGACCCAAATGCTACCGTGCGCGCTTCCCTG
ATTTGCAGCCTACTCTGTCAACGTGTCCCCGTCCTTATCCTGGAGGAAAA
CATGCGTATTTGTGAAGCATATGATGCGAACCAGGATGCTGTCCTCCTCC
AATTGATTGCAGATCTTCTTCTCGAGGTCGGAAAAGGACGAGCACTCCTA
CTCCCTCCAACTGTAGGTAGCCCCCATGCCACTCCGCCTCCGCCTCCACA
TCCGTTGGAATACGTCCTGTCCCCCTTCATGCATTTTACCAGAGCTCAAC
AACGACTCCATTCGGCTCCTCGACCACGTCTGCGGGGATTTCAATGACGC
GCGGAGTACAACGGAGAAACTCTCATTGAGGCGCTATTCTCATCCCCAAG
AACCAGCACTCCTTCCACGTTTTAGACATGTCTTATCCCTCTCGATAGCA
GATAAGAGCTGACTTGAAGAGCCACTCTTCCTCTTGCTTGTGCTCTTGCG
CATAATAAACGAGGAAATTCCCCTCGCTCATTCTCGCCCTTGACGTCAAC
CTCCCAATGCGCGCTGCCTCGTCAACTCCGTGATTTGAGCCAGCCGGAAA
CTACCACGGCATGTCCAGTTCTTGGGCTTGTCCTCCGAATATGCTTTGCG
CTGGTCCACGTCCGCTAGCATCAGCATTCAATCGTCCACCTTGAATTTGG
CCGTCACAGCCCACCCCCGCTCGAAGGTGGAGCCAAAGGTGATGCGCTTT
TCCTGGATAGCAGGAACGAATTTCTGCAGGTCTGTCCACTATTCGTTTCC
CTCCTCTATGATAAGTCCGACGCCACAAGCTCGCACTTATCATATTCCAT
GTTTCTGCAACGCTGGCACGTGCAGGAGGTGGGAAATATCAAAACGTACC
CACCGCACGTCACAAAGCTATGATGAGACTTGATCCCCGCCATATCCCTC
ACCACATCCTTGTCCACACCCACCAACTCCACAAATACGAAGGTGCGGGA
ATTCGCCTTCAGCTGGATGCCCGTCTCCGCCTCCCACTCCTCGCTGTCGT
GGTACTATTTGTG back to topprotein sequence of NO06G04620.1 >NO06G04620.1-protein ID=NO06G04620.1-protein|Name=NO06G04620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=148bp
MKAIRSASSRASRLPWCSKEVPSMRMRRVARNMQPLSLLGVLSHDWPMAV
SRGGLHLEWNVAPPSMNNAAMPEAAIVRALAPQEHWRLGTRPGSGALDSG
ASCHIPIGLSRPTLRYSANLPKVFIDFLCLSRTQNDGSPRSSLSTNH* back to topmRNA from alignment at chr6:1325199..1330121- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO06G04620.1 ID=NO06G04620.1|Name=NO06G04620.1|organism=Nannochloropsis oceanica|type=mRNA|length=4923bp|location=Sequence derived from alignment at chr6:1325199..1330121- (Nannochloropsis oceanica)
TTTCGAACGTTGTAATCTTTTTCTTTTTTGGGGGGTTCACACATCCCTCC
TCCTATCGAGAGCGCGATGTACTGCTGACCGTCAGGAAAACCCGGGGACC
TGACATTGGCGGAGGATGAAAGGTACACCCTGGGTGTCGTCGTTGGTGTC
CATGTTCATGCTGGGAAGGCGGACAAATTGACCCACATGGCTCCCCGTCA
GAATTTTGGCCTCGATGACGCGAGGAGAAAGATGCAGGATGAGCAAACGT
GTCTCATTTGCAAGGCCTTGAACCGGGTCTGCGTTCCGCAACAGGATGAC
AGGTATGCCCACTTTTAGCCGTAGTTGGTGCAGGGCGAAGCCGGGCGGGT
TCTTGGAGTTTAAGAGCTCCGTGGGGTAAGCACCCTCGTTCTCGTCCTGC
TCCAGCCTGTCTGCTGAGGGGGGAATGGGGTCGCTGTTGAGCTCTGGCGG
AGGATGCATGAAGGGGGGCAGGAGGTATTCCAACTGAGGTGAAGGCAGAG
ACGGGGTGGCATATGGGCTACCTACAGTTGAAGTGGGTATAGGGGTGCCC
GTCCATCCCCGACCGCGAGGAGGAGGTCCGCAATCAATTGGAGGAGGGTA
GCATCCTGGCCCGCGTCATGCGCCGAACGAGTACGCATGTTTTCCTTAAG
GGTAAGGACGCGGAAAGTTGTCAGAGAGGGCTGCAAATCAGAGAAACGCG
CACGGTAGCATTTGGGTCGTCGTCTCGGATCACTGGGTGGATTTGGCAGA
GATCCCCCCAAAGAACAACGACTTTTCCACCGAGCGGAATATGTGCAAGG
TCCGGGTGAGCCATGAAGGCCATTCGCAGTGCTTCATCGAGGGCCTCGAG
GTTGCCCTGGTGCAGCAAAGAGGTCCCGTCAATGAGGATGAGGCGAGTGG
CAAGGAATATGCAACCTCTCTCATTGTTGGGCGTGTTGTCGCACGATTGG
CCGATGGCCGTGTCCCGTGGGGGCCTGCACCTGGAGTGGAATGTGGCCCC
GCCCTCCATGAACAACGCCGCGATGCCTGAGGCGGCCATCGTAAGAGCAT
TGGCGCCGCAAGAGCATTGGCGCCTTGGAACCAGACCTGGTTCAGGAGCA
CTTGATTCAGGTGCGTCTTGCCACATCCCTATTGGCTTATCTCGTCCGAC
ATTACGTTATTCTGCCAATCTACCTAAAGTGTTTATCGATTTTTTGTGTC
TGTCGCGCACTCAAAACGATGGTTCTCCGCGTTCTTCTCTTTCCACAAAC
CACTGAAGCACATGCACGCTTACCGAAACACATGTAGAAAAATACAATGC
ACAAACCTCTATGCAGTCTTTGTGACGTCGTCCTGTGGTTTGTGTGGTTT
TGAGCTTCCCTTGCCTCAATTTGGAGTGTTCCGCGTCCCACGGGTCCACA
AATAATCGTTTCCTTTCCAATTGATGATGACGCATTCAAAATATGGGCAT
TGGCCATGGACCTCGCATCCTTCACCAAGTGGGATGCGTCTTGATTCAGC
ATCATCATCACCGCTCCTCACTCAGAGCACCGCACCACTATGCCTTTTGT
GCACCTGGGCTGGGGCATGAATGGTGGTCAAGACGACGAGAACGGCCATG
TAAGTGGTAACGAGCATGACGAGAATGATGCTCAGCAGTGAGTGCCATCT
TCGACAAGCATATTTTGACAGCCAATTCATGAACAGCGACGATGATTACA
CACACACAGCCATGTGGAGTCGCAGGCCAGGGCCGGGGCCGGGGTCGGGG
CCGAGGCCGAGGCAGGGGGTTACCGCGTTATAATTCTGTCCGGAGGCCAC
GCAACCAAGTCGAGCGAGAAGCTGACAGACAGGGCTGATTAAGCCGACGC
ATTTGTGCAGGCTCGCCACCCATCCGGAGTGTTTCTCATCTATACCCCTG
GGAGATGTGGCAAGACGCACCTGAATCAAGTGCTCCTGAACCAGGTCTGG
TTCCAAGGCGCCAATGCTCTTGCGATGGCCGCCTCAGGCATCGCGGCGTT
GCTCATGGAGGGTGGGGCCACATTCCACTCCAGGTGCAAGCCCCCACGGG
ACACGGCCATCGGCCAATCGTGCGACAACACGCCCAACAATGAGAGAGGT
TGCATATTCCTTGCCACTCGCCTCATCCTCATTGACGAGACCTGTATTAA
TACTTGCTCATAGACTGCATTGAATGTGGCAAGTGCGGGAGGGGGCTGGC
CGTGGAGAGGAGAGTGGGTGACCATCATGGTGATATTGGTGGGGTCTCCT
ACTCTCGAAAGTGCGACGTACAGTTGACCTTGAGCAATAACCGGGGACGG
CAAGTAAATTGCGACTTTGGGAAGGTCTGTTCCTAAGATTTGTTTATAGT
GATGGCGAAGGCAGGCCGGACCGGGCACTAACGTCGGCGGAGAATGACTT
GATTGCGTGGCCTCCACCCAGAATTATTACGCGGGCGCCTGTGCCCCGGC
CCCGGCCTCGGCCCCGGCCCTAGCCTGCGACTCCACATGGCTGAGATTGT
ACTGCATCATTCTCGCCGTTCGTGGATTGGCTGCCAAAATTTGTCGCACG
TTGAAGACGGCACCCACGACCCAACTGCTGCGCCTCATTCTCGTCTTGTT
CGTTACCACTTGCATGACCTTTCTCATTGTCTTGACCACCATTCATTCCC
CCGCCCTAGTGGTCAATGGTCATGGCGGTGCTGTGCTGTGAGCAAATGTG
GGAGAGTGGGAGAATGGCGTCGAACTGTGTTGCGAGGGGGAGCGGTCTGG
GCGATGGCCCATAGCAAATGACCATATTTTGAATTCGTCGTCATCAATAC
CAACCTCGACCCTTCCACCCCCTATAAACATGGAGAAGAGCAAAGAAGGG
AGCAATACTACTCAGTGCATGGTCAGCAAATCGGAGTACACTCTTATTAT
GCTTATCTCATTCGTGAGGGGTTGAGGAGGGGTTGAGGGAAGAGAAAGGT
GACCCGAGGGGAGTTGGAGAGGGAGTGATGATTTGTGGACCCGCGGGCTG
CGGACCACTCCACATTGAGGAATTTTTGTCTGTCTGTTTGTCTGTCTGTC
GCGCACTTAAAACGATGATTTTCCGCGTTCTTCTCTTTCCACAAACCACC
AACGCACATGCATGCTAAGCAATATACTTGAAGCAATATACAATGCAAAA
GATTCTATGCAGTCTTTGTGACATCGTCCCGTGGTTTGTGTGCTTTTGAG
CTTCCCGTCCCTCAATTTGGAGTGTTCCGCAGCCCGCGGGTCCACAAATC
ATCACTCCTTCTCCAACTCCCCTCGGGTCACCTTCCTCTTCCTTCAACCC
CTCACAAAAGAAATAAGCATTATAACGGCGCACATCCATTTGCTGACCAT
GCACTAGGTGTAAAGCATTGCTCCCTTCTTTGCTCTTTTCCATGTTTATT
GAGGGTGGAGGGTGGCATTAATGATGACACATTCCAAATATGGGCGTTGG
CGATAAGCCATCCCCCAGACCGCTTTCCCTTGCAACACAGCTGAACACCA
TCCCCCTACTCTCCCACCCCGGCTAGCACCGCCATGTCTATTGTGCACCT
GGGCGGGGGGCATGAATGGCGGTGAAGGCTGCCGCTTGGGGCAACATTTC
AGAATGCCTTCGCGTCCATTTAGGGTACAATCGCCTCGCCCTTTCCACCA
AAGTCGCTCAAGCTCTCCCTGACCTGGACAAACTGTAGCGCGACACCTTC
GACTCCGTCACTGAGGCCATTGCACGGTGGCCGTACGCGCCGCAAGAAGC
CGACGTATTTTGTGCAGGTTAGCCACCCATCCGGAGTGTTTTCCCGGACC
TTGCACATATTCCGCTCGGTGGAAAAGTCGTTGTTCTTTGGGGGGATCTC
TGTCAAATCCACCCAGTGGTCCGAGACGACGACCCAAATGCTACCGTGCG
CGCTTCCCTGATTTGCAGCCTACTCTGTCAACGTGTCCCCGTCCTTATCC
TGGAGGAAAACATGCGTATTTGTGAAGCATATGATGCGAACCAGGATGCT
GTCCTCCTCCAATTGATTGCAGATCTTCTTCTCGAGGTCGGAAAAGGACG
AGCACTCCTACTCCCTCCAACTGTAGGTAGCCCCCATGCCACTCCGCCTC
CGCCTCCACATCCGTTGGAATACGTCCTGTCCCCCTTCATGCATTTTACC
AGAGCTCAACAACGACTCCATTCGGCTCCTCGACCACGTCTGCGGGGATT
TCAATGACGCGCGGAGTACAACGGAGAAACTCTCATTGAGGCGCTATTCT
CATCCCCAAGAACCAGCACTCCTTCCACGTTTTAGACATGTCTTATCCCT
CTCGATAGCAGATAAGAGCTGACTTGAAGAGCCACTCTTCCTCTTGCTTG
TGCTCTTGCGCATAATAAACGAGGAAATTCCCCTCGCTCATTCTCGCCCT
TGACGTCAACCTCCCAATGCGCGCTGCCTCGTCAACTCCGTGATTTGAGC
CAGCCGGAAACTACCACGGCATGTCCAGTTCTTGGGCTTGTCCTCCGAAT
ATGCTTTGCGCTGGTCCACGTCCGCTAGCATCAGCATTCAATCGTCCACC
TTGAATTTGGCCGTCACAGCCCACCCCCGCTCGAAGGTGGAGCCAAAGGT
GATGCGCTTTTCCTGGATAGCAGGAACGAATTTCTGCAGGTCTGTCCACT
ATTCGTTTCCCTCCTCTATGATAAGTCCGACGCCACAAGCTCGCACTTAT
CATATTCCATGTTTCTGCAACGCTGGCACGTGCAGGAGGTGGGAAATATC
AAAACGTACCCACCGCACGTCACAAAGCTATGATGAGACTTGATCCCCGC
CATATCCCTCACCACATCCTTGTCCACACCCACCAACTCCACAAATACGA
AGGTGCGGGAATTCGCCTTCAGCTGGATGCCCGTCTCCGCCTCCCACTCC
TCGCTGTCGTGGTACTATTTGTG back to topCoding sequence (CDS) from alignment at chr6:1325199..1330121- >NO06G04620.1 ID=NO06G04620.1|Name=NO06G04620.1|organism=Nannochloropsis oceanica|type=CDS|length=444bp|location=Sequence derived from alignment at chr6:1325199..1330121- (Nannochloropsis oceanica)
ATGAAGGCCATTCGCAGTGCTTCATCGAGGGCCTCGAGGTTGCCCTGGTG
CAGCAAAGAGGTCCCGTCAATGAGGATGAGGCGAGTGGCAAGGAATATGC
AACCTCTCTCATTGTTGGGCGTGTTGTCGCACGATTGGCCGATGGCCGTG
TCCCGTGGGGGCCTGCACCTGGAGTGGAATGTGGCCCCGCCCTCCATGAA
CAACGCCGCGATGCCTGAGGCGGCCATCGTAAGAGCATTGGCGCCGCAAG
AGCATTGGCGCCTTGGAACCAGACCTGGTTCAGGAGCACTTGATTCAGGT
GCGTCTTGCCACATCCCTATTGGCTTATCTCGTCCGACATTACGTTATTC
TGCCAATCTACCTAAAGTGTTTATCGATTTTTTGTGTCTGTCGCGCACTC
AAAACGATGGTTCTCCGCGTTCTTCTCTTTCCACAAACCACTGA back to top
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