NO06G04580, NO06G04580 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G04580 vs. NCBI_GenBank
Match: EWM20218.1 (hypothetical protein Naga_100748g2 [Nannochloropsis gaditana]) HSP 1 Score: 262.3 bits (669), Expect = 2.300e-66 Identity = 122/260 (46.92%), Postives = 166/260 (63.85%), Query Frame = 0 Query: 103 TYQYSDPVETLITILAGVSTRGVSWTSPTELAPFRHLLPSIVRTVECGFRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEFLSPWAYKFVRTLQGMGSPYGVVGPWCNQSNTKILNHDFTHRTHMDIFED-YYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKILEYMVMHNVPND 362 T S+ L+ IL V+TRG+++ P ELA F++LLPS+ T ECG+ Y V++GYD GD FYDTP G E W + Q I N + + + V+N ++KPGPVFN +A AY GADY YRVNDD+EFL W F++ L+ G PYGVVGP C NT IL HDFTHR HM+IF+ YYP L+DW++DDWI+ VYG RTR+ E +E++HH RY VD+ +K L+ L+ KG +I + ++ +P + Sbjct: 74 TESLSERGRPLVAILVAVTTRGLTFDQPNELALFKYLLPSLWLTAECGYDYRVVVGYDEGDPFYDTPAGVEAVQNWIEHCRQCIPGNVGLWMAVHFVSVKNDLKKPGPVFNKMAEAAYDLGADYFYRVNDDTEFLQTWTTPFIQVLEEFGPPYGVVGPLCKHGNTAILTHDFTHRMHMEIFDRLYYPEELSDWWMDDWITSVYGEARTRRMEAVEVIHHVEGTR-RYDVDFAHKKVLQALIDKGHQRIEGWRKVNLIPKE 332
BLAST of NO06G04580 vs. NCBI_GenBank
Match: XP_013761146.1 (hypothetical protein AMSG_02117 [Thecamonas trahens ATCC 50062] >KNC56104.1 hypothetical protein AMSG_02117 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 261.2 bits (666), Expect = 5.200e-66 Identity = 119/264 (45.08%), Postives = 167/264 (63.26%), Query Frame = 0 Query: 108 DPVETLITILAGVSTRGVSWTSPTELAPFRHLLPSIVRTVECGFRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEFLSPWAYKFVRTLQGMGSPYGVVGPWCNQSNTKILNHDFTHRTHMDIFEDYYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKILEYMVMHNVPNDEIEAFDASRF 372 +P I + +TRG++ TS + L+ F +LPS+ RTVE GFRY V++ +D GD FY+ WF + + + LA A+I + L++ N +KPGP FN + R A GA++ YR+NDDSEF++PWA F TL +G PYG VGP C Q NT IL HDF HRTH+DIFE YYPP L DW++DDWIS VYG++RT + + EI+HHT N RY VD+ + L + + GK +I+ +M H++ D I+A++ F Sbjct: 231 EPGPDWIAVCVSSTTRGINPTSLSSLSLFSLMLPSLARTVEPGFRYRVVIIHDVGDAFYEDDGTYAAIEDWFNSRIAHPLAAADIEVQLLMVSFTNTQRKPGPAFNVMLRAAADFGAEWFYRINDDSEFVAPWAVDFTTTLLALGQPYGAVGPLCKQGNTAILTHDFVHRTHLDIFETYYPPALVDWWMDDWISRVYGASRTVKVNSAEIIHHTDNHGTRYQVDFANQPKLAEALEHGKKRIVAWMEEHDIEQDVIDAYNNDNF 494
BLAST of NO06G04580 vs. NCBI_GenBank
Match: XP_009042113.1 (hypothetical protein AURANDRAFT_68227 [Aureococcus anophagefferens] >EGB03183.1 hypothetical protein AURANDRAFT_68227 [Aureococcus anophagefferens]) HSP 1 Score: 252.3 bits (643), Expect = 2.400e-63 Identity = 130/253 (51.38%), Postives = 160/253 (63.24%), Query Frame = 0 Query: 113 LITILAGVSTRGV-SWTSP-----TELAPFRHLLPSIVRTVECGFRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRG-ADYLYRVNDDSEFLSPWAYKFVRTLQGMGSPYGVVGPWCNQSNTKILNHDFTHRTHMDIFE-DYYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKILEYMVMHN 358 L+ + G +TRG W +P ELA F HLLPS VRTV+CGFRY V+LGYD GDKF+D G + WF +V+++LA AN+ L V+NKI+KPGPVF I R AY ADY+YRVNDD+E + WA FV L M + G VGP C Q N KIL HDFTHR HMDIFE YYPP L+DW++DDWIS VYG+ RT + E +E++HHTG RY VD L+ L+ G KI Y+ N Sbjct: 269 LVAVCCGTTTRGKGGWITPRPDALEELAVFDHLLPSFVRTVDCGFRYAVVLGYDVGDKFWDLGDGATLARAWFDENVKSVLAAANVEAELRFAVVDNKIKKPGPVFTAITRHAYYEAKADYIYRVNDDTELATRWAKHFVAALATMDN-VGAVGPMCKQGNRKILTHDFTHRKHMDIFEGTYYPPELSDWWMDDWISGVYGADRTLRGEVVEVVHHTGKHGQRYGVDKSHAGLLKGLLAGGSKKIQAYVAKSN 520
BLAST of NO06G04580 vs. NCBI_GenBank
Match: XP_009042094.1 (hypothetical protein AURANDRAFT_68202 [Aureococcus anophagefferens] >EGB03216.1 hypothetical protein AURANDRAFT_68202 [Aureococcus anophagefferens]) HSP 1 Score: 248.8 bits (634), Expect = 2.700e-62 Identity = 134/318 (42.14%), Postives = 181/318 (56.92%), Query Frame = 0 Query: 62 LQACSEYEPQSTQNLIAWTDKS---WKELVCPG---------PDVIPSRLLCSTYQYSDPVETLITILAGVSTRGV-SWTSP-----TELAPFRHLLPSIVRTVECGFRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSR-GADYLYRVNDDSEFLSPWAYKFVRTLQGMGSPYGVVGPWCNQSNTKILNHDFTHRTHMDIFED-YYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKILEYMVMHNVP 360 LQA +P T + S WKEL C G + +DP + LI + +G +TR W +P +LA F++LLPS RT ECGFRY V+L YD GD+F+D G WF+ + LA AN+++ L KV+N ++KPGPVF + R AY+ ADY+YRVNDD+EF + WA FV L MG+ G VGP C Q NT IL HDFTHRTHMDIF+ YYPP L+DW++DDWI+ VYGS RT + +E++HHTG RY VD+ K ++ L+ G ++ ++ + P Sbjct: 383 LQATHGVKPAMTWGTLDRNPSSFRRWKELGCGGVVERAANXXXXXXXXXXXXXCPKSADP-KPLIAVCSGTTTRQKGGWITPRPGHLEDLAAFQYLLPSFKRTAECGFRYLVVLAYDVGDQFWDRGDGVARARAWFEASIATPLAAANMDVELRFVKVDNAVKKPGPVFAAMTRAAYAAWKADYIYRVNDDTEFKTKWARPFVNALASMGN-VGAVGPLCRQGNTAILTHDFTHRTHMDIFDGAYYPPELSDWWMDDWITGVYGSLRTLMGDRVEVIHHTGKHGQRYAVDFAHEKLVKQLIAAGHARVESFVAARDAP 698
BLAST of NO06G04580 vs. NCBI_GenBank
Match: CBN79406.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 246.1 bits (627), Expect = 1.700e-61 Identity = 129/274 (47.08%), Postives = 163/274 (59.49%), Query Frame = 0 Query: 77 IAWTDKSWKELVCPGPDVIPSRLLCSTYQYSDPVETLITILAGVSTRGVSWTSPTELAPFRHLLPSIVRTVECGFRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEFLSPWAYKFVRTLQGMGSPYGVVGPWCNQSNTKILNHDFTHRTHMDIF-EDYYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKI 350 + W +W+ +C PS SDP LI + AG +TRGV + LA FR LLPS+ RT +CGFRY ++GYD GD F+D G + V A ++I L L +VEN IQKPGPVF + + AY RGA+Y+YRVNDDSE +PWA FV ++ MG PYGVVGP N IL HDFTHR HMDIF + YYPP LTDWY+DDWIS VYG++RT + +N + HHTG RY D + ++ LV+ G KI Sbjct: 12 VDWKTLAWEGGLCRRKRFEPSAT-------SDP---LIAVCAGSTTRGVPFPDEHSLALFRFLLPSLARTADCGFRYLAVVGYDVGDGFFDGAAG--------KAKVARPAALRGLSIELELVRVENAIQKPGPVFTAVTKAAYDRGANYIYRVNDDSEMHTPWARSFVNAIEAMGPPYGVVGP--ESLNKNILVHDFTHRLHMDIFDQQYYPPSLTDWYVDDWISRVYGNSRTIRAKNCRVEHHTGAHGQRYNADTSKASSVDGLVLVGARKI 265
BLAST of NO06G04580 vs. NCBI_GenBank
Match: XP_005819540.1 (hypothetical protein GUITHDRAFT_46116, partial [Guillardia theta CCMP2712] >EKX32560.1 hypothetical protein GUITHDRAFT_46116, partial [Guillardia theta CCMP2712]) HSP 1 Score: 206.1 bits (523), Expect = 2.000e-49 Identity = 98/227 (43.17%), Postives = 137/227 (60.35%), Query Frame = 0 Query: 111 ETLITILAGVSTRGVSWTSPTELAPFRHLLPSIVRTVECGFRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEFLSPWAYKFVRTLQGMGSPY-GVVGPWCNQSNTKILNHDFTHRTHMDIFEDYYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHT----GNQNVRYTVDY 333 + +I I+ G ++RG W S E LL S++RT+E GF Y + +G+D+GD FYD +E +WF+ HV + + I + N ++KPGP+FN +A A+ GAD++YR+NDD+EF + WA FV +L P+ GVVGP C N KIL HDF HRTH IF+ YYP +L+DW++DDWIS VY + T + + + HHT G VRY VDY Sbjct: 2 QPIIAIILGSTSRGYRWDSLEESPLVMVLLSSLLRTLEQGFEYRMYVGFDAGDLFYDDEKRREELTQWFEKHVSSPAKDKGITARFASVRFLNVLRKPGPIFNFLAAAAFEDGADFVYRINDDTEFRTLWAGAFVSSLAAFDPPFLGVVGPTCEDGNRKILTHDFVHRTHSYIFQTYYPVVLSDWWMDDWISKVYPRSNTGRHAMVVVTHHTWMTGGGNPVRYQVDY 228
BLAST of NO06G04580 vs. NCBI_GenBank
Match: XP_005827268.1 (hypothetical protein GUITHDRAFT_113531 [Guillardia theta CCMP2712] >EKX40288.1 hypothetical protein GUITHDRAFT_113531 [Guillardia theta CCMP2712]) HSP 1 Score: 200.3 bits (508), Expect = 1.100e-47 Identity = 111/265 (41.89%), Postives = 155/265 (58.49%), Query Frame = 0 Query: 105 QYSDPVETLITILAGVSTRGVSWTSPTELAPFRHLLPSIVRTVECGFRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEFLS-PWAYKFVRTLQGMG-SPYGVVGPW----CNQSNTKILNHDFTHRTHMDIFEDYYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHT----------GNQNVRYTVDYYRRKYLEDLVVKGKGKILEYM 354 Q S + + T+L G ++ V + + + F LLPS+ RT++ F Y V++GYD+GD FYD +WF+ +V+ I+ L+ N ++KPGPVFN +A A S GAD+L+RVNDD+E S WA K TL GM S GVVGP + + +L HDF HRTHM IFE YYPP+L+DW++DDWIS VYG +RTR+ ++ ++HHT VRY VD+ +KYLE V KG +I E++ Sbjct: 266 QPSGKKQVVATVL-GSTSINVKFRTLEDNPLFTKLLPSLRRTMDGEFEYWVLVGYDTGDLFYDDERTLTSLKKWFRRNVEAPSKEKGIDCKLIFLNFTNVLRKPGPVFNFVAASAVSDGADFLFRVNDDTEIASWGWASKMSSTLAGMSPSLLGVVGPSGRGDSSSEHRYMLTHDFVHRTHMRIFETYYPPVLSDWWMDDWISRVYGRSRTRKLGDVLVVHHTEVVASFHGTDAGDPVRYAVDWAHKKYLEHEVHKGSRRIKEFV 529
BLAST of NO06G04580 vs. NCBI_GenBank
Match: XP_005828785.1 (hypothetical protein GUITHDRAFT_74535, partial [Guillardia theta CCMP2712] >EKX41805.1 hypothetical protein GUITHDRAFT_74535, partial [Guillardia theta CCMP2712]) HSP 1 Score: 185.7 bits (470), Expect = 2.800e-43 Identity = 85/208 (40.87%), Postives = 122/208 (58.65%), Query Frame = 0 Query: 114 ITILAGVSTRGVSWTSPTELAPFRHLLPSIVRTVECGFRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEFLSPWAYKFVRTLQGMGSP-YGVVGPWCNQSNTKILNHDFTHRTHMDIFEDYYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHH 321 + +L V++ G W E+ R LPSI +T E G+ Y V +GYD GD F+D + F+T ++N + + L + EN ++KPGPVFN ++ A GADY+YR+NDD+EF + W ++RTL P GVVGP C + N +IL HDF H TH+ IF +YPP+L DW++DDWIS VY + R+ + + HH Sbjct: 13 VAVLIPVTSHGFRWKGIEEVPLIRFCLPSISQTAELGYDYAVYMGYDVGDLFFDNQQVLQQIKVHFETQIRNPNLQRGVEMQLAVLGFENLLKKPGPVFNFLSSSAALDGADYIYRINDDTEFRTAWTSSYIRTLLSFKPPNVGVVGPTCREGNERILTHDFVHVTHLHIFGVHYPPVLMDWWMDDWISSVYPAENFRKLRTVLVTHH 220
BLAST of NO06G04580 vs. NCBI_GenBank
Match: KOO35391.1 (hypothetical protein Ctob_012549 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 181.0 bits (458), Expect = 6.800e-42 Identity = 85/206 (41.26%), Postives = 126/206 (61.17%), Query Frame = 0 Query: 151 FRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEFL-SPWAYKFVRTLQGMGSP-YGVVGPWCNQSNTKILNHDFTHRTHMDIFEDYYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKILEYMV 355 F Y + + YD+GD+FYD+ + W T + LA + + L + +N + KPGP FN + A+ GADYLYRVNDD++F+ + W V TL+G P GVVGP C++ NT+IL HD HRTH++IFE YYPP+ +DW++DDWI+ VYG+ RTR+ + H T Q RYT+D + L+ + G+ +I +++ Sbjct: 68 FEYWLYVLYDAGDQFYDSESREAEVSSWLTTELVAPLAQRGVRLRFALLRFQNVLHKPGPAFNFMMAAAWEDGADYLYRVNDDTQFVGTEWVGAAVSTLRGYSPPNVGVVGPTCDEGNTRILTHDLVHRTHLEIFEHYYPPIFSDWWMDDWITQVYGTERTRK-AAFRVRHLTSFQGTRYTIDRSHEQRLQAELEAGRQRIERWLL 272
BLAST of NO06G04580 vs. NCBI_GenBank
Match: KOO20866.1 (hypothetical protein Ctob_000130 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 180.6 bits (457), Expect = 8.900e-42 Identity = 85/202 (42.08%), Postives = 121/202 (59.90%), Query Frame = 0 Query: 155 VILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEFLSPWAYKFVRTLQGMGSP-YGVVGPWCNQSNTKILNHDFTHRTHMDIFEDYYPPLLTDWYLDDWISMVYGSTRTRQFEN--IEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKILEYM 354 V + YD GDKFYD+ + W T+V LA A + L + EN ++KPGP+FN + A GADYLYR+NDD+EF++PW + L+G P GVVGP C + NT+I+ HD HRTH++IF+ YYPP+L+DW++DDWI+MVY R F + HH RY+VDY + L+ + G+ +I ++ Sbjct: 62 VYVAYDVGDKFYDSAARELDVRAWLDTYVVGPLATAGVRAQHALLRFENALRKPGPIFNFMMAAAAEDGADYLYRINDDTEFVTPWVGLALSALRGYSPPNVGVVGPICREGNTRIITHDLVHRTHLEIFDYYYPPILSDWWMDDWITMVYDE---RHFTKGPFVVRHHVSMHGTRYSVDYAHEQMLQGELRSGRMQIQAWL 260 The following BLAST results are available for this feature:
BLAST of NO06G04580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G04580 ID=NO06G04580|Name=NO06G04580|organism=Nannochloropsis oceanica|type=gene|length=5730bpback to top protein sequence of NO06G04580.1 >NO06G04580.1-protein ID=NO06G04580.1-protein|Name=NO06G04580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=381bpback to top protein sequence of NO06G04580.2 >NO06G04580.2-protein ID=NO06G04580.2-protein|Name=NO06G04580.2|organism=Nannochloropsis oceanica|type=polypeptide|length=211bpback to top Synonyms
Publications
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