NO06G04580.1, NO06G04580.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO06G04580.1
Unique Name	NO06G04580.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	5459
Alignment location	chr6:1309712..1315441 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr6	genome	chr6:1309712..1315441 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO06G04580.1 vs.
Match: EWM20218.1 (hypothetical protein Naga_100748g2 [Nannochloropsis gaditana])

HSP 1 Score: 262.3 bits (669), Expect = 2.300e-66
Identity = 122/260 (46.92%), Postives = 166/260 (63.85%), Query Frame = 0

Query:  103 TYQYSDPVETLITILAGVSTRGVSWTSPTELAPFRHLLPSIVRTVECGFRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEFLSPWAYKFVRTLQGMGSPYGVVGPWCNQSNTKILNHDFTHRTHMDIFED-YYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKILEYMVMHNVPND 362
            T   S+    L+ IL  V+TRG+++  P ELA F++LLPS+  T ECG+ Y V++GYD GD FYDTP G E    W +   Q I  N  + + +    V+N ++KPGPVFN +A  AY  GADY YRVNDD+EFL  W   F++ L+  G PYGVVGP C   NT IL HDFTHR HM+IF+  YYP  L+DW++DDWI+ VYG  RTR+ E +E++HH      RY VD+  +K L+ L+ KG  +I  +  ++ +P +
Sbjct:   74 TESLSERGRPLVAILVAVTTRGLTFDQPNELALFKYLLPSLWLTAECGYDYRVVVGYDEGDPFYDTPAGVEAVQNWIEHCRQCIPGNVGLWMAVHFVSVKNDLKKPGPVFNKMAEAAYDLGADYFYRVNDDTEFLQTWTTPFIQVLEEFGPPYGVVGPLCKHGNTAILTHDFTHRMHMEIFDRLYYPEELSDWWMDDWITSVYGEARTRRMEAVEVIHHVEGTR-RYDVDFAHKKVLQALIDKGHQRIEGWRKVNLIPKE 332

The following BLAST results are available for this feature:

BLAST of NO06G04580.1 vs.

BLAST of NO06G04580.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM20218.1	2.300e-66	46.92	hypothetical protein Naga_100748g2 [Nannochloropsi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO06G04580	NO06G04580	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO06G04580.1	NO06G04580.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO06G04580.1.cds1	NO06G04580.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04580.1.cds2	NO06G04580.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04580.1.cds3	NO06G04580.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04580.1.cds4	NO06G04580.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04580.1.cds5	NO06G04580.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr6:1309712..1315441+
coding sequence from alignment at chr6:1309712..1315441+

mRNA sequence

>NO06G04580.1 ID=NO06G04580.1|Name=NO06G04580.1|organism=Nannochloropsis oceanica|type=mRNA|length=5459bp
CCCGAAGCTCGAGCGGGGTTGGAGGCTCCCACCTCTATCGTAAATTGCTA
TGACACAATTATCAACGACTAAAGCAATTTCAGACCCCAAAACACACTGG
AAACCCTCAACGTCGAAACCCCCCAACGTCATGACGTACGTCGACGTTGG
AATTCTGGTCGACGTTGACGCGTCGACGTCAGGAATCTAACGTCGACCCA
ACCCTGGTCGCAGACATGTATCATCATATTATGATGATACATGTCTGCAA
AAAAACTTGGACATTTTGTTCGCGCAACCGGCGAATCCGTGCCGTGGGTT
AGTTGTGCTAGCTGACGATCAACCATAAGTTGTAGATGTCTCAACTTTCT
CACAACTATGACAACTATTAGTCGTGCACAATCGCAGGACGGGATAACTG
ACAACCAACTAAGTAGTTGCGGTAGTTGTCCAACGTGTTGTTAGAACCAT
AATTTGAAGGGCTAACGATTCTGTCTAGCTTAGTACTTGACCAAACGATG
TAAAAAGAACTAAGTCCGATAAGGTGTTGTCCTTGTTTAGAAGGTCCTCG
ACATTAACAACAAGAGACAAAATTCGACTTGGACCACTCATAGCCAAAAA
CTAAGCACTTGCGCTTCATCTTAACTTAGTTCGCTCAAGGGGTGGGGTTG
GGGTCCCCCTAAGCCTCTCTCGATATAACCTATAAATAAGAGTTAGTCCG
CACGCGGCGCGAACGCGCTCTAACTTTGTCATGCGCACGACTTTTATGTT
TCTTTACTTGGGAAACTCCTAATTTCTATATGAATCTATATACTTGGTCC
GTGTCATGACGAGAAAATCTAGATCCCAATCTATTTCGGGAAAGTTACAG
GTATTTCTCAAATGTTCATTGCATTCTTCCTGGGAGAAGACAACCTTGTA
TTCATCTTGAAAGTTTTTCAGGAAAATACGTGGTCGAGTGATATCTTCAT
TTATTGATTGGCAGTAATCTGCTCCCCCTGCCACAATCTTGACTTCACCG
TGCAAAACCAAGGTACGGCTTGCTTTGGCTTGTCCCCAGAGCTCGCCTTG
CGCTGGTATAAGCTTACCTTGGAATGTAGGGCTTAGGGCTCCGACCCGTA
TATCAGGTAGGTCATCAAAGGCCTTTGCCAGCGGTGGTTGATCATTTAGT
GTACGACCGGTTTTGAAGAGTTCCTCTTTCCAGCGTTCCCACAATACATC
AATAATCGGACGCTTTGCCCAAGCCATCACGCCGTTATCGAAAGCGGGTA
GGATGCCTGCAGATACGCCCAGAAAGTCATAATACTGCAGGAGCTGAAAA
ACCTGCGATATATTACCACAAACAGTCCGGTCACTATCCAGCTGCAATGT
ATAAAAATAGGGACTTTTGGATAAATATAGCGCACGTGTCCACCACTGCC
GTCCATGTGCATCCTGTGGGCTCTCAATAATATCAGCATCTGCGATTGGG
ATGACATGGTCGACTCCCCAGGTATCTCTGACGTCATCTAGAGATAAGGG
AACATTGGTTGCGACAGTCACATTAATGCATGGATTATATCGTCGAACAC
TATCGATGCTATCGCGTGCACGCATCAAGATACGCTTGGCATGCTTATGA
TCTTTATGGTAGGCAAAGTACAAAACCCCTTTGTCGGGCTCTGTTACGCA
GTATAGCTTCTCAGATGTTCTGACCATACGTTCGCTGCTAGGAAATGAGT
ACCAGGGAAGAGATATCAAAGTACCGCATGATAAAATGATGACAAGTGTG
GTCAAGCCATTCAGACGGTGAAAGCGGGGATCTTTCCCCATTATATGCTT
GAGAATAGTACACAGTGTTTTGTATCTTCCCTATGCAAAGAACCTACTCA
TATGCTAATGTGATTTACTGGTTTATTTTTGTCCTCGATTACAGAAGTAA
AGCTTCGAAAAATCACATTGCATTGCAATTGGAAACCGCGAAACCGTCTA
CGGAATATACAGAAAGTTGTGTACGTTAATGTGCCCTTTTTATTATTTGG
GGGGTTTAATCACCTTCACGTGCTTTGCCACCGACATGATGGCATCTCTT
TCTCTCTTGACGTTAGCACCACAACAAGCTAGTCCCGCATGACGGGGTAG
CTGCCGGCATCAGGCTACTGGCGCTTTCGCGGAATGGTGACGCCATCCGG
CTTTGAACAAGCCACTTCTTTGGCTGCCGGTCATGTGTTAAATGATCCGA
TCAAGACCAGAAGCGCGTGAGTAGAAGTCCTGGTATGTTGCCGTTCTTTG
GATGTTCTATGTTACATTTTCGATGTTCTGTCTTGAAATGAGTCAAATAG
CTCCTTCTAGCCATGGAACATAGTAAGCGGGTCGCGACGCCATGATTTTG
ATGCTCTATGGTGAATTTTGCTCGTTTTGTGACAAAAAAAGAGTCCTAGC
ACGAAAATCCCGTAGCACGTTCAAATGTGTTCGTAAGCATATGTGTATTT
GGTATCTCTTGATTTTAATGTTGTATGTTCTATGTCATACGTAGATTTTT
CTGAAAAAGTAAAAAAAGTAAATTGTAAAACCTTATAATAGGTTGAAATC
TTTTCCTCCATATTGTCCGCTCCAATATTAAAAAACATGCTCGAACCCCG
AATTCTCGATCCCCGACATATTTATCGATATACCGGGCTCGGGTCATACA
TTTTTGAACTAGTTCGACCATTTCCTGGAAGCCAAAGAGAAGGCGGTCAG
CTCGAACCTCTTAGTGAGAGGATCGGGAAAAAAACAAAAAACATAAAGCT
CTTGATTTTCCTGTTTTCAAATTTTTCTGCGCAGAGAGTGAGTAATTAAG
TCGCATCTTCCATTTAGGGGTCCCTGATATCAGTCCCTAGGAATATCCCC
TCCACCCGACCTATTCTCCCCAAACACTCTCCACCGGCTTAACCCGGCTA
GAAGTACGGACTATCCGATCTATCCGGCAAGAGAAAACTAGCCAGCGCTA
ATCCTTGCTTGTACCGAAGGGCTTTGCACAATGTTTCCCCAAGCCTTCCC
CACGATTGTCACGATAATGCCCTTCGAATTCCCTAGAATGTAAAAAATTA
CCTGAAATATGACTCATGCATTTCTTGCACGGCATATCACTTAAGAAACA
CATTTAAGGTATGCGCCGACATAGGAAACACCATTTCCTCTTTTTGGTGC
TGTTAATTGGAGCCTGTGGCCTTCATTGCATTCTGGTATTTGAGCGACAG
ATACGCGACGATTGGAGCTACAAAGCTCCCCCAGCACACAAGGAAAGACA
TTCCTTGTACTTCGCTTCATCAGACATGCATATAGATGAGACTTTGCAGG
CATGTTCAGAATATGAGCCGCAATCCACACAAAATTTAATTGCGTGGACA
GATAAGTCATGGAAAGAACTCGTTTGCCCCGGCCCTGATGTTATACCATC
GCGACTACTATGTAGCACTTATCAATACAGCGACCCAGTAGAGACTTTGA
TCACTATTTTGGCAGGAGTATCGACTCGAGGAGTGTCTTGGACCTCTCCT
ACGGAGCTCGCACCATTTCGGCATTTGCTTCCATCGATTGTAAGGACTGT
GGAATGCGGATTTCGCTACGAGGTGATCCTGGGTTACGATAGCGGTGATA
AATTTTACGACACTCCATTAGGCCAGGAGGTGACTTTCAGATGGTTCCAG
ACACATGTGCAAAACATCCTAGCAAATGCGAACATCAATATTATGCTTGT
TTTGAAGAAAGTAGAAAACAAAATCCAGAAGCCAGGTCCGGTATTCAACG
ATATAGCTCGCATGGCCTACAGCCGGGGCGCTGACTACCTTTATCGCGTA
AATGACGACTCGGAATTCCTCAGCCCTTGGGCTTACAAGTTCGTAAGAAC
TCTTCAAGGGATGGGCAGCCCATATGGTGTCGTTGGACCATGGTGTAACC
AGAGTAATACAAAGATATTGAACCATGACTTTACACATCGTACCCATATG
GACATTTTTGAAGATTATTACCCCCCTCTCCTTACAGACTGGTATCTGGA
CGATTGGATATCTATGGTATACGGCAGCACCAGGACGAGACAATTTGAGA
ATATTGAGATACTTCATCACACTGGAAACCAAAATGTACGGTATACGGTT
GACTACTATCGACGGAAGTATTTGGAAGATCTTGTTGTAAAAGGAAAGGG
CAAGATACTAGAGTATATGGTGATGCATAATGTACCAAATGATGAAATCG
AGGCGTTCGATGCATCTCGCTTCAAAAACTTCACCATTAAACTGGTCAAG
TAAGTGGGATGTAGTAAGAACAAAATAGCCTTGTTAAATTGCCTTGATAA
GCCATGGATGACATAGAGTATGCGAACTTTCCTTCATTGGTTTTGAGGAT
TTTAGAAGAAAAGGGTAGTGGGTCTGTGGAAATCGAGTAACTCTTGATGG
CCTTGTCAGGAGGGTTCATGTGGACTCAATTTCCCATCACGCTCTTGGGT
CCCAGCCATGCACTTTTTCTTTATCATGCATGTTTCGATCCATTACATGC
TTTCTGCTCTCTCTGGCGCAATAGAACACCTTAGAGAATGCTCATTTTTG
ATCAACGATTTGCTTAGAATTCCGGAGGGGTGCCTGATAATTGCCGATGG
TTATGATATTCGAAGCTTTTATTTCATTTCTTCTCACTCTGTGATGATGG
TATGCATGTAAAACTTGAAACATTTGGAGCGCTGAGGAACTTTCTGTCTC
AAGAGCCCTCTCTCGAGGTTTCCCGCAGGAAATGCGCCTGAAAAATGAGC
TGATGGAGAAATTCGCGAAAACCTACTTTCAATGTTTGTTGACATTTTCC
GTCTTTCTTGCCTCACAAATAAAGCGGGAGTATAGGAATGCTCAGAAGGC
GTTTCTGTCACACGGGCCTTCTCTGGAGGCTTCGCGCCACACGTTGGATG
ACTACCAATATTCCATAGTCAGTCGCTAAACCTCCTGTCTTGCGATTGTG
CATGACTATTTGTCGTTACAATCGTCCACTCCAACGATTATGCACGACTA
TGGCGATTTAAACGACTCTCACGACAATGACGACTCCCACTGACTACACA
GAAACTATACAGAGAGTTATGTAAGGTTTTTGCTCTTTTCACTTTTTTGG
GGTTTCAATCACCATTACGAGCCTTGCTACCGGCATAGTGACATCACCTT
CTATCATATTTTGAGCACCAAAATAACCCCGCCCCGCATGAGGGGGTAGA
TGCCAGCATCAGGCCAGTGGTGTTTTCGCGGGACAAAATGTCTCTGATCA
TATCTGTGGGACTATCTGATCGTATCTGTGGGATATTCAGACTTACTTGA
GGTGAAAGGGAAAAAAAGAAATTTTGTGTTGCTTTGCGACTGACCTTCGG
TCTGCATGAGAGCAAAGTCAAACTCACAAAGGAAAGAAGGAAAGAACTAA
AGTTTCATTACACACAATGGTTCACGTACGGTAAACCAGCGAAAATCAAT
TTACGTAGT

protein sequence of NO06G04580.1

>NO06G04580.1-protein ID=NO06G04580.1-protein|Name=NO06G04580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=381bp
MRRHRKHHFLFLVLLIGACGLHCILVFERQIRDDWSYKAPPAHKERHSLY
FASSDMHIDETLQACSEYEPQSTQNLIAWTDKSWKELVCPGPDVIPSRLL
CSTYQYSDPVETLITILAGVSTRGVSWTSPTELAPFRHLLPSIVRTVECG
FRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKK
VENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEFLSPWAYKFVRTLQG
MGSPYGVVGPWCNQSNTKILNHDFTHRTHMDIFEDYYPPLLTDWYLDDWI
SMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKIL
EYMVMHNVPNDEIEAFDASRFKNFTIKLVK*

mRNA from alignment at chr6:1309712..1315441+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO06G04580.1 ID=NO06G04580.1|Name=NO06G04580.1|organism=Nannochloropsis oceanica|type=mRNA|length=5730bp|location=Sequence derived from alignment at chr6:1309712..1315441+ (Nannochloropsis oceanica)
CCCGAAGCTCGAGCGGGGTTGGAGGCTCCCACCTCTATCGTAAATTGCTA
TGACACAATTATCAACGACTAAAGCAATTTCAGACCCCAAAACACACTGG
AAACCCTCAACGTCGAAACCCCCCAACGTCATGACGTACGTCGACGTTGG
AATTCTGGTCGACGTTGACGCGTCGACGTCAGGAATCTAACGTCGACCCA
ACCCTGGTCGCAGACATGTATCATCATATTATGATGATACATGTCTGCAA
AAAAACTTGGACATTTTGTTCGCGCAACCGGCGAATCCGTGCCGTGGGTT
AGTTGTGCTAGCTGACGATCAACCATAAGTTGTAGATGTCTCAACTTTCT
CACAACTATGACAACTATTAGTCGTGCACAATCGCAGGACGGGATAACTG
ACAACCAACTAAGTAGTTGCGGTAGTTGTCCAACGTGTTGTTAGAACCAT
AATTTGAAGGGCTAACGATTCTGTCTAGCTTAGTACTTGACCAAACGATG
TAAAAAGAACTAAGTCCGATAAGGTGTTGTCCTTGTTTAGAAGGTCCTCG
ACATTAACAACAAGAGACAAAATTCGACTTGGACCACTCATAGCCAAAAA
CTAAGCACTTGCGCTTCATCTTAACTTAGTTCGCTCAAGGGGTGGGGTTG
GGGTCCCCCTAAGCCTCTCTCGATATAACCTATAAATAAGAGTTAGTCCG
CACGCGGCGCGAACGCGCTCTAACTTTGTCATGCGCACGACTTTTATGTT
TCTTTACTTGGGAAACTCCTAATTTCTATATGAATCTATATACTTGGTCC
GTGTCATGACGAGAAAATCTAGATCCCAATCTATTTCGGGAAAGTTACAG
GTATTTCTCAAATGTTCATTGCATTCTTCCTGGGAGAAGACAACCTTGTA
TTCATCTTGAAAGTTTTTCAGGAAAATACGTGGTCGAGTGATATCTTCAT
TTATTGATTGGCAGTAATCTGCTCCCCCTGCCACAATCTTGACTTCACCG
TGCAAAACCAAGGTACGGCTTGCTTTGGCTTGTCCCCAGAGCTCGCCTTG
CGCTGGTATAAGCTTACCTTGGAATGTAGGGCTTAGGGCTCCGACCCGTA
TATCAGGTAGGTCATCAAAGGCCTTTGCCAGCGGTGGTTGATCATTTAGT
GTACGACCGGTTTTGAAGAGTTCCTCTTTCCAGCGTTCCCACAATACATC
AATAATCGGACGCTTTGCCCAAGCCATCACGCCGTTATCGAAAGCGGGTA
GGATGCCTGCAGATACGCCCAGAAAGTCATAATACTGCAGGAGCTGAAAA
ACCTGCGATATATTACCACAAACAGTCCGGTCACTATCCAGCTGCAATGT
ATAAAAATAGGGACTTTTGGATAAATATAGCGCACGTGTCCACCACTGCC
GTCCATGTGCATCCTGTGGGCTCTCAATAATATCAGCATCTGCGATTGGG
ATGACATGGTCGACTCCCCAGGTATCTCTGACGTCATCTAGAGATAAGGG
AACATTGGTTGCGACAGTCACATTAATGCATGGATTATATCGTCGAACAC
TATCGATGCTATCGCGTGCACGCATCAAGATACGCTTGGCATGCTTATGA
TCTTTATGGTAGGCAAAGTACAAAACCCCTTTGTCGGGCTCTGTTACGCA
GTATAGCTTCTCAGATGTTCTGACCATACGTTCGCTGCTAGGAAATGAGT
ACCAGGGAAGAGATATCAAAGTACCGCATGATAAAATGATGACAAGTGTG
GTCAAGCCATTCAGACGGTGAAAGCGGGGATCTTTCCCCATTATATGCTT
GAGAATAGTACACAGTGTTTTGTATCTTCCCTATGCAAAGAACCTACTCA
TATGCTAATGTGATTTACTGGTTTATTTTTGTCCTCGATTACAGAAGTAA
AGCTTCGAAAAATCACATTGCATTGCAATTGGAAACCGCGAAACCGTCTA
CGGAATATACAGAAAGTTGTGTACGTTAATGTGCCCTTTTTATTATTTGG
GGGGTTTAATCACCTTCACGTGCTTTGCCACCGACATGATGGCATCTCTT
TCTCTCTTGACGTTAGCACCACAACAAGCTAGTCCCGCATGACGGGGTAG
CTGCCGGCATCAGGCTACTGGCGCTTTCGCGGAATGGTGACGCCATCCGG
CTTTGAACAAGCCACTTCTTTGGCTGCCGGTCATGTGTTAAATGATCCGA
TCAAGACCAGAAGCGCGTGAGTAGAAGTCCTGGTATGTTGCCGTTCTTTG
GATGTTCTATGTTACATTTTCGATGTTCTGTCTTGAAATGAGTCAAATAG
CTCCTTCTAGCCATGGAACATAGTAAGCGGGTCGCGACGCCATGATTTTG
ATGCTCTATGGTGAATTTTGCTCGTTTTGTGACAAAAAAAGAGTCCTAGC
ACGAAAATCCCGTAGCACGTTCAAATGTGTTCGTAAGCATATGTGTATTT
GGTATCTCTTGATTTTAATGTTGTATGTTCTATGTCATACGTAGATTTTT
CTGAAAAAGTAAAAAAAGTAAATTGTAAAACCTTATAATAGGTTGAAATC
TTTTCCTCCATATTGTCCGCTCCAATATTAAAAAACATGCTCGAACCCCG
AATTCTCGATCCCCGACATATTTATCGATATACCGGGCTCGGGTCATACA
TTTTTGAACTAGTTCGACCATTTCCTGGAAGCCAAAGAGAAGGCGGTCAG
CTCGAACCTCTTAGTGAGAGGATCGGGAAAAAAACAAAAAACATAAAGCT
CTTGATTTTCCTGTTTTCAAATTTTTCTGCGCAGAGAGTGAGTAATTAAG
TCGCATCTTCCATTTAGGGGTCCCTGATATCAGTCCCTAGGAATATCCCC
TCCACCCGACCTATTCTCCCCAAACACTCTCCACCGGCTTAACCCGGCTA
GAAGTACGGACTATCCGATCTATCCGGCAAGAGAAAACTAGCCAGCGCTA
ATCCTTGCTTGTACCGAAGGGCTTTGCACAATGTTTCCCCAAGCCTTCCC
CACGATTGTCACGATAATGCCCTTCGAATTCCCTAGAATGTAAAAAATTA
CCTGAAATATGACTCATGCATTTCTTGCACGGCATATCACTTAAGAAACA
CATTTAAGGTATGCGCCGACATAGGAAACACCATTTCCTCTTTTTGGTGC
TGTTAATTGGAGCCTGTGGCCTTCATTGCATTCTGGTATTTGAGCGACAG
ATACGCGACGATTGGAGCTACAAAGCTCCCCCAGCACACAAGGAAAGACA
TTCCTTGTACTTCGCTTCATCAGACATGTACGTGCATTTGATCTTAAGAG
ACAATTTCGATGAGGAACGTTATATTACCCGTGATTGTCTCTTCGAACAG
GCATATAGATGAGACTTTGCAGGCATGTTCAGAATATGAGCCGCAATCCA
CACAAAATTTAATTGCGTGGACAGATAAGTCATGGAAAGAACTCGTTTGC
CCCGGCCCTGATGTTATACCATCGCGACTACTATGTAGCACTTATCAATG
TAAGTAAGGCACATCACAGGTTAACTTGATCCATGTCGTTCAGGAACCCC
ATACAATAAAGACAGCGACCCAGTAGAGACTTTGATCACTATTTTGGCAG
GAGTATCGACTCGAGGAGTGTCTTGGACCTCTCCTACGGAGCTCGCACCA
TTTCGGGTAAGTTCTTTGTCCTATATTTTGAACTAGACGTGATCCTTGAT
TCTCATTGCTGATTATCGAAGCATTTGCTTCCATCGATTGTAAGGACTGT
GGAATGCGGATTTCGCTACGAGGTGATCCTGGGTTACGATAGCGGTGATA
AATTTTACGACACTCCATTAGGCCAGGAGGTGACTTTCAGATGGTTCCAG
GTATTTATAAATATGCATTTTCCCTTGGTCCCTTCAATCTGTTTTTTCTC
ACATTGTCTTAACCCTAACAGACACATGTGCAAAACATCCTAGCAAATGC
GAACATCAATATTATGCTTGTTTTGAAGAAAGTAGAAAACAAAATCCAGA
AGCCAGGTCCGGTATTCAACGATATAGCTCGCATGGCCTACAGCCGGGGC
GCTGACTACCTTTATCGCGTAAATGACGACTCGGAATTCCTCAGCCCTTG
GGCTTACAAGTTCGTAAGAACTCTTCAAGGGATGGGCAGCCCATATGGTG
TCGTTGGACCATGGTGTAACCAGAGTAATACAAAGATATTGAACCATGAC
TTTACACATCGTACCCATATGGACATTTTTGAAGATTATTACCCCCCTCT
CCTTACAGACTGGTATCTGGACGATTGGATATCTATGGTATACGGCAGCA
CCAGGACGAGACAATTTGAGAATATTGAGATACTTCATCACACTGGAAAC
CAAAATGTACGGTATACGGTTGACTACTATCGACGGAAGTATTTGGAAGA
TCTTGTTGTAAAAGGAAAGGGCAAGATACTAGAGTATATGGTGATGCATA
ATGTACCAAATGATGAAATCGAGGCGTTCGATGCATCTCGCTTCAAAAAC
TTCACCATTAAACTGGTCAAGTAAGTGGGATGTAGTAAGAACAAAATAGC
CTTGTTAAATTGCCTTGATAAGCCATGGATGACATAGAGTATGCGAACTT
TCCTTCATTGGTTTTGAGGATTTTAGAAGAAAAGGGTAGTGGGTCTGTGG
AAATCGAGTAACTCTTGATGGCCTTGTCAGGAGGGTTCATGTGGACTCAA
TTTCCCATCACGCTCTTGGGTCCCAGCCATGCACTTTTTCTTTATCATGC
ATGTTTCGATCCATTACATGCTTTCTGCTCTCTCTGGCGCAATAGAACAC
CTTAGAGAATGCTCATTTTTGATCAACGATTTGCTTAGAATTCCGGAGGG
GTGCCTGATAATTGCCGATGGTTATGATATTCGAAGCTTTTATTTCATTT
CTTCTCACTCTGTGATGATGGTATGCATGTAAAACTTGAAACATTTGGAG
CGCTGAGGAACTTTCTGTCTCAAGAGCCCTCTCTCGAGGTTTCCCGCAGG
AAATGCGCCTGAAAAATGAGCTGATGGAGAAATTCGCGAAAACCTACTTT
CAATGTTTGTTGACATTTTCCGTCTTTCTTGCCTCACAAATAAAGCGGGA
GTATAGGAATGCTCAGAAGGCGTTTCTGTCACACGGGCCTTCTCTGGAGG
CTTCGCGCCACACGTTGGATGACTACCAATATTCCATAGTCAGTCGCTAA
ACCTCCTGTCTTGCGATTGTGCATGACTATTTGTCGTTACAATCGTCCAC
TCCAACGATTATGCACGACTATGGCGATTTAAACGACTCTCACGACAATG
ACGACTCCCACTGACTACACAGAAACTATACAGAGAGTTATGTAAGGTTT
TTGCTCTTTTCACTTTTTTGGGGTTTCAATCACCATTACGAGCCTTGCTA
CCGGCATAGTGACATCACCTTCTATCATATTTTGAGCACCAAAATAACCC
CGCCCCGCATGAGGGGGTAGATGCCAGCATCAGGCCAGTGGTGTTTTCGC
GGGACAAAATGTCTCTGATCATATCTGTGGGACTATCTGATCGTATCTGT
GGGATATTCAGACTTACTTGAGGTGAAAGGGAAAAAAAGAAATTTTGTGT
TGCTTTGCGACTGACCTTCGGTCTGCATGAGAGCAAAGTCAAACTCACAA
AGGAAAGAAGGAAAGAACTAAAGTTTCATTACACACAATGGTTCACGTAC
GGTAAACCAGCGAAAATCAATTTACGTAGT

Coding sequence (CDS) from alignment at chr6:1309712..1315441+

>NO06G04580.1 ID=NO06G04580.1|Name=NO06G04580.1|organism=Nannochloropsis oceanica|type=CDS|length=1143bp|location=Sequence derived from alignment at chr6:1309712..1315441+ (Nannochloropsis oceanica)
ATGCGCCGACATAGGAAACACCATTTCCTCTTTTTGGTGCTGTTAATTGG
AGCCTGTGGCCTTCATTGCATTCTGGTATTTGAGCGACAGATACGCGACG
ATTGGAGCTACAAAGCTCCCCCAGCACACAAGGAAAGACATTCCTTGTAC
TTCGCTTCATCAGACATGCATATAGATGAGACTTTGCAGGCATGTTCAGA
ATATGAGCCGCAATCCACACAAAATTTAATTGCGTGGACAGATAAGTCAT
GGAAAGAACTCGTTTGCCCCGGCCCTGATGTTATACCATCGCGACTACTA
TGTAGCACTTATCAATACAGCGACCCAGTAGAGACTTTGATCACTATTTT
GGCAGGAGTATCGACTCGAGGAGTGTCTTGGACCTCTCCTACGGAGCTCG
CACCATTTCGGCATTTGCTTCCATCGATTGTAAGGACTGTGGAATGCGGA
TTTCGCTACGAGGTGATCCTGGGTTACGATAGCGGTGATAAATTTTACGA
CACTCCATTAGGCCAGGAGGTGACTTTCAGATGGTTCCAGACACATGTGC
AAAACATCCTAGCAAATGCGAACATCAATATTATGCTTGTTTTGAAGAAA
GTAGAAAACAAAATCCAGAAGCCAGGTCCGGTATTCAACGATATAGCTCG
CATGGCCTACAGCCGGGGCGCTGACTACCTTTATCGCGTAAATGACGACT
CGGAATTCCTCAGCCCTTGGGCTTACAAGTTCGTAAGAACTCTTCAAGGG
ATGGGCAGCCCATATGGTGTCGTTGGACCATGGTGTAACCAGAGTAATAC
AAAGATATTGAACCATGACTTTACACATCGTACCCATATGGACATTTTTG
AAGATTATTACCCCCCTCTCCTTACAGACTGGTATCTGGACGATTGGATA
TCTATGGTATACGGCAGCACCAGGACGAGACAATTTGAGAATATTGAGAT
ACTTCATCACACTGGAAACCAAAATGTACGGTATACGGTTGACTACTATC
GACGGAAGTATTTGGAAGATCTTGTTGTAAAAGGAAAGGGCAAGATACTA
GAGTATATGGTGATGCATAATGTACCAAATGATGAAATCGAGGCGTTCGA
TGCATCTCGCTTCAAAAACTTCACCATTAAACTGGTCAAGTAA

Synonyms

Publications