NO06G04350, NO06G04350 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO06G04350
Unique Name	NO06G04350
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2898
Alignment location	chr6:1221968..1224865 +

Link to JBrowse

Properties


Property Name	Value
Description	Ribosomal protein S8e/ribosomal biogenesis NSA2

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr6	genome	chr6:1221968..1224865 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR022309	Ribosomal_S8e/biogenesis_NSA2

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Homology

[Close]

BLAST of NO06G04350 vs. NCBI_GenBank
Match: EWM26455.1 (Ribosomal protein S8e/ribosomal biogenesis NSA2 [Nannochloropsis gaditana])

HSP 1 Score: 499.6 bits (1285), Expect = 5.900e-138
Identity = 253/260 (97.31%), Postives = 259/260 (99.62%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSRFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKHANEEGAPEGAVPAYLIDREGVSRAKVLSNTVKQKRAERAGKWSVPLPKVKPVADDEMFRVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 261
            MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRS+FAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNK AN+EGAPEGAVPAYLIDREG+SRAKVLSN+VKQKRAE+AGKWSVPLPKVKPVADDEMF+VMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV
Sbjct:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260

[Close]

BLAST of NO06G04350 vs. NCBI_GenBank
Match: XP_005854765.1 (ribosome biogenesis nsa2-like protein [Nannochloropsis gaditana CCMP526] >XP_005855410.1 ribosome biogenesis nsa2-like protein [Nannochloropsis gaditana CCMP526] >EKU20941.1 ribosome biogenesis nsa2-like protein [Nannochloropsis gaditana CCMP526] >EKU21592.1 ribosome biogenesis nsa2-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 469.5 bits (1207), Expect = 6.600e-129
Identity = 254/328 (77.44%), Postives = 259/328 (78.96%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSRFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKHANEEGAPEGAVPAYLIDREGVSRAKVLSNTVKQKRAERAGKWSVPLPKVKPVADDEMFRVMQSGKRK--------------------------------------------------------------------AKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 261
            MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRS+FAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNK AN+EGAPEGAVPAYLIDREGVSRAKVLSN+VKQKRAE+AGKWSVPLPKVKPVADDEMF+VMQSGKRK                                                                    AKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV
Sbjct:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGVSRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKGRKLITTCFAFPPFYSAPFYPFYPPLLVENVSERNHFAHPAPSRPLAFLEPRRGYTRTIFSPRLARFTAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 328

[Close]

BLAST of NO06G04350 vs. NCBI_GenBank
Match: CBJ30688.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 439.5 bits (1129), Expect = 7.300e-120
Identity = 216/260 (83.08%), Postives = 244/260 (93.85%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSRFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKHANEEGAPEGAVPAYLIDREGVSRAKVLSNTVKQKRAERAGKWSVPLPKVKPVADDEMFRVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 261
            MPQH+YME H+K+HGER+DR E+ RKK+AREVH+RS FAQKVHG+RAKLY  KR+KEKA MRKT+AMHQE+TNKHAN++  P+GAVPAYL+DREGVSRAKVLSNTVKQKR E+AGKW VP+PKVKPVADDEMF+V++SGKRK K+WKRMVTKVTFVGE FTRKAPK+ERFIRPTGLRFKKAHVTHP+L+ATF LDILGVKKNPSSP+YT LGV+TKGTVIEVNVS+LGLVT SGKVVWGKYAQVTN+PELDGCINAVLLV
Sbjct:    1 MPQHEYMEAHKKRHGERMDRAEKRRKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 260

[Close]

BLAST of NO06G04350 vs. NCBI_GenBank
Match: OQS01040.1 (ribosome biogenesis protein NSA2 [Achlya hypogyna])

HSP 1 Score: 429.1 bits (1102), Expect = 9.800e-117
Identity = 209/260 (80.38%), Postives = 239/260 (91.92%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSRFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKHANEEGAPEGAVPAYLIDREGVSRAKVLSNTVKQKRAERAGKWSVPLPKVKPVADDEMFRVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 261
            MPQH++ME H+K+HG RLD  ER RK+EAREVHRRS+FAQKVHGLRAKLYN KR+KEKA M+KTLAMH E+TNKHAN++  P+GAVPAYL+DREGVSRAKVLSNTVKQKR E+AGKW VP+PKVKP+ADDEMF+V++SGKR+ K+WKRM+TK TFVGENFTRK PK+ERFIRP  +RFKKAHVTHP+L+ TF LDILGVKKNP+SP+YT LGV+TKGT+IEVNVSELGLVTTSGKVVWGKYAQVTNNPE DGCINAVLLV
Sbjct:    1 MPQHEHMEMHKKRHGVRLDHAERTRKREAREVHRRSQFAQKVHGLRAKLYNQKRFKEKAAMKKTLAMHNERTNKHANDDNIPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPAAMRFKKAHVTHPELKTTFQLDILGVKKNPNSPLYTQLGVMTKGTIIEVNVSELGLVTTSGKVVWGKYAQVTNNPENDGCINAVLLV 260

[Close]

BLAST of NO06G04350 vs. NCBI_GenBank
Match: OQS07100.1 (ribosome biogenesis protein NSA2 [Thraustotheca clavata])

HSP 1 Score: 427.9 bits (1099), Expect = 2.200e-116
Identity = 208/260 (80.00%), Postives = 239/260 (91.92%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSRFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKHANEEGAPEGAVPAYLIDREGVSRAKVLSNTVKQKRAERAGKWSVPLPKVKPVADDEMFRVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 261
            MPQH++ME H+K+HG RLD  ER RK+EAREVHRRS+FAQKVHGLRAKLYN KR+KEKA M+KTLAMH E+TNKHAN++  P+GAVP+YL+DREGVSRAKVLSNTVKQKR E+AGKW VP+PKVKP+ADDEMF+V++SGKR+ K+WKRM+TK TFVGENFTRK PK+ERFIRP  +RFKKAHVTHP+L+ TF LDILGVKKNP+SP+YT LGV+TKGT+IEVNVSELGLVTTSGKVVWGKYAQVTNNPE DGCINAVLLV
Sbjct:    1 MPQHEHMEMHKKRHGVRLDHAERTRKREAREVHRRSQFAQKVHGLRAKLYNQKRFKEKAAMKKTLAMHNERTNKHANDDNIPDGAVPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPAAMRFKKAHVTHPELKTTFQLDILGVKKNPNSPLYTQLGVMTKGTIIEVNVSELGLVTTSGKVVWGKYAQVTNNPENDGCINAVLLV 260

[Close]

BLAST of NO06G04350 vs. NCBI_GenBank
Match: XP_008608269.1 (ribosome biogenesis protein N [Saprolegnia diclina VS20] >XP_012201543.1 ribosome biogenesis protein N [Saprolegnia parasitica CBS 223.65] >EQC38677.1 ribosome biogenesis protein N [Saprolegnia diclina VS20] >KDO27768.1 ribosome biogenesis protein N [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 426.8 bits (1096), Expect = 4.900e-116
Identity = 207/260 (79.62%), Postives = 239/260 (91.92%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSRFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKHANEEGAPEGAVPAYLIDREGVSRAKVLSNTVKQKRAERAGKWSVPLPKVKPVADDEMFRVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 261
            MPQH++ME H+K+HG R+D  ER RK+EAREVHRRS+FAQKVHGLRAKLYN KR+KEKA M+KT+AMH E+TNKHAN++  P+GAVPAYL+DREGVSRAKVLSNTVKQKR E+AGKW VP+PKVKP+ADDEMF+V++SGKR+ K+WKRM+TK TFVGENFTRK PK+ERFIRP  +RFKKAHVTHP+L+ TF LDILGVKKNP+SP+YT LGV+TKGT+IEVNVSELGLVTTSGKVVWGKYAQVTNNPE DGCINAVLLV
Sbjct:    1 MPQHEHMEMHKKRHGVRMDMVERTRKREAREVHRRSQFAQKVHGLRAKLYNQKRFKEKAAMKKTIAMHNERTNKHANDDNIPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPAAMRFKKAHVTHPELKTTFQLDILGVKKNPNSPLYTQLGVMTKGTIIEVNVSELGLVTTSGKVVWGKYAQVTNNPENDGCINAVLLV 260

[Close]

BLAST of NO06G04350 vs. NCBI_GenBank
Match: XP_008862009.1 (hypothetical protein H310_00853 [Aphanomyces invadans] >XP_009829542.1 hypothetical protein H257_06127 [Aphanomyces astaci] >ETV80595.1 hypothetical protein H257_06127 [Aphanomyces astaci] >ETW08204.1 hypothetical protein H310_00853 [Aphanomyces invadans])

HSP 1 Score: 425.2 bits (1092), Expect = 1.400e-115
Identity = 207/260 (79.62%), Postives = 237/260 (91.15%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSRFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKHANEEGAPEGAVPAYLIDREGVSRAKVLSNTVKQKRAERAGKWSVPLPKVKPVADDEMFRVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 261
            MPQH++ME H+K+HG R D  ER RKKEAREVHRRS FAQKVHGLRAKLYN KR+KEKA M+KTLAMH E+TNKHAN++  P+GAVP+YL+DREGVSRAKVLSNTVKQKR E+AGKW VP+PKVKP+ADDEMF+V++SGKR+ K+WKRM+TK TFVGENFTRK PK+ERFIRP  +RFKKAHVTHP+L+ TF LDILGVKKNPSSP+YT LGV+TKGT+IEVNVSELGLVTT+GKVVWGK+AQVTNNPE DGCINAVLLV
Sbjct:    1 MPQHEHMEMHKKRHGVRYDHHERARKKEAREVHRRSAFAQKVHGLRAKLYNQKRFKEKAAMKKTLAMHNERTNKHANDDNIPDGAVPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPAAMRFKKAHVTHPELKTTFQLDILGVKKNPSSPLYTQLGVMTKGTIIEVNVSELGLVTTTGKVVWGKFAQVTNNPENDGCINAVLLV 260

[Close]

BLAST of NO06G04350 vs. NCBI_GenBank
Match: XP_002907883.1 (ribosome biogenesis protein NSA2 [Phytophthora infestans T30-4] >XP_008893091.1 hypothetical protein PPTG_01518 [Phytophthora parasitica INRA-310] >XP_009526307.1 hypothetical protein PHYSODRAFT_351148 [Phytophthora sojae] >EEY60966.1 ribosome biogenesis protein NSA2 [Phytophthora infestans T30-4] >EGZ17249.1 hypothetical protein PHYSODRAFT_351148 [Phytophthora sojae] >ETI45371.1 hypothetical protein F443_10029 [Phytophthora parasitica P1569] >ETK85330.1 hypothetical protein L915_09823 [Phytophthora parasitica] >ETL38756.1 hypothetical protein L916_09730 [Phytophthora parasitica] >ETL91876.1 hypothetical protein L917_09653 [Phytophthora parasitica] >ETM45168.1 hypothetical protein L914_09700 [Phytophthora parasitica] >ETN21283.1 hypothetical protein PPTG_01518 [Phytophthora parasitica INRA-310] >ETO74018.1 hypothetical protein F444_10118 [Phytophthora parasitica P1976] >ETP15184.1 hypothetical protein F441_09972 [Phytophthora parasitica CJ01A1] >ETP43256.1 hypothetical protein F442_09933 [Phytophthora parasitica P10297] >KUF91761.1 Ribosome biogenesis protein NSA2 [Phytophthora nicotianae] >KUF93246.1 hypothetical protein AM588_10005262 [Phytophthora nicotianae] >OWZ20594.1 Ribosome biogenesis protein N [Phytophthora megakarya] >POM70277.1 Ribosome biogenesis protein NSA2 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 421.8 bits (1083), Expect = 1.600e-114
Identity = 205/260 (78.85%), Postives = 238/260 (91.54%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSRFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKHANEEGAPEGAVPAYLIDREGVSRAKVLSNTVKQKRAERAGKWSVPLPKVKPVADDEMFRVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 261
            MPQH++ME HRK+HG R+D  E+ RKKEAREVHRRS+FAQKVHGLRAKLYN KR+KEKA M+KTLA+H E+TNKHAN++  P+GAVP+YL+DREGVSRAKVLSNTVKQKR E+AGKW VP+PKVKP+ADDEMF+V++SGKR+ K+WKRM+TK TFVGENFTRK PK+ERFIRP+ +RFKKAHVTHP+L+ TF LDILGVKKNP SP+YT LGV+TKGT+IEVNVSELGLVTTSGKVVWGKYAQ+TN PE DGCINAVLLV
Sbjct:    1 MPQHEHMEMHRKRHGVRMDAAEKKRKKEAREVHRRSQFAQKVHGLRAKLYNQKRFKEKAAMKKTLALHNERTNKHANDDEIPDGAVPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPSAMRFKKAHVTHPELKTTFQLDILGVKKNPQSPLYTQLGVMTKGTIIEVNVSELGLVTTSGKVVWGKYAQITNVPENDGCINAVLLV 260

[Close]

BLAST of NO06G04350 vs. NCBI_GenBank
Match: XP_009036538.1 (hypothetical protein AURANDRAFT_60066 [Aureococcus anophagefferens] >EGB08531.1 hypothetical protein AURANDRAFT_60066 [Aureococcus anophagefferens])

HSP 1 Score: 418.7 bits (1075), Expect = 1.300e-113
Identity = 206/260 (79.23%), Postives = 238/260 (91.54%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSRFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKHANEEGAPEGAVPAYLIDREGVSRAKVLSNTVKQKRAERAGKWSVPLPKVKPVADDEMFRVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 261
            MPQH++++QHRK+HGERLD  E+ RKKEAR VH  ++FA+KVHGLRAKLYN +R+KEKA MRKT+AMH+EK  +  N++GA +GAVPA+L+DREG SRAK+LSN++KQKRAE+AGKWSVP+PKVKPVADDEMFRV QSGKRK KSWKR+VTKVTFV  NFTRK PK+ERFIRP+GL  KKAHVTHP+L+ATFCLDI+GVKKNPSS MYTTLGVITKGTVIEVNVSELGLVTT+G+VVWGKYAQVTNNPELDGCINAVLLV
Sbjct:    1 MPQHEHIDQHRKRHGERLDAPEKRRKKEARSVHENAKFAKKVHGLRAKLYNKQRFKEKATMRKTIAMHEEKEARARNDDGANDGAVPAFLLDREGASRAKILSNSIKQKRAEKAGKWSVPIPKVKPVADDEMFRVQQSGKRKKKSWKRVVTKVTFVDPNFTRKPPKYERFIRPSGLSMKKAHVTHPELKATFCLDIIGVKKNPSSQMYTTLGVITKGTVIEVNVSELGLVTTTGRVVWGKYAQVTNNPELDGCINAVLLV 260

[Close]

BLAST of NO06G04350 vs. NCBI_GenBank
Match: XP_024584079.1 (ribosome biogenesis protein nsa2 [Plasmopara halstedii] >CEG47710.1 ribosome biogenesis protein nsa2 [Plasmopara halstedii])

HSP 1 Score: 418.7 bits (1075), Expect = 1.300e-113
Identity = 204/260 (78.46%), Postives = 237/260 (91.15%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSRFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKHANEEGAPEGAVPAYLIDREGVSRAKVLSNTVKQKRAERAGKWSVPLPKVKPVADDEMFRVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 261
            MPQH++ME HRK+HG R+D  E+ RKKEAREVHRRS+FAQKVHGLRAKLYN KR+KEKA M+KTLA+H E+TNKHAN++  P+GAVP+YL+DREGVSRAKVLSNTVKQKR E+AGKW VP+PKVKP+ADDEMF+V++SGKR+ K+WKRM+TK TFVGENFTRK PK+ERFIRP+ +RFKKAHVTHP+L+ TF L ILGVKKNP SP+YT LGV+TKGT+IEVNVSELGLVTTSGKVVWGKYAQ+TN PE DGCINAVLLV
Sbjct:    1 MPQHEHMEMHRKRHGVRMDAAEKKRKKEAREVHRRSQFAQKVHGLRAKLYNQKRFKEKAAMKKTLALHNERTNKHANDDEIPDGAVPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPSAMRFKKAHVTHPELKTTFQLAILGVKKNPQSPLYTQLGVMTKGTIIEVNVSELGLVTTSGKVVWGKYAQITNVPENDGCINAVLLV 260

The following BLAST results are available for this feature:

BLAST of NO06G04350 vs. NCBI_GenBank

BLAST of NO06G04350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM26455.1	5.900e-138	97.31	Ribosomal protein S8e/ribosomal biogenesis NSA2 [N...	[more]
XP_005854765.1	6.600e-129	77.44	ribosome biogenesis nsa2-like protein [Nannochloro...	[more]
CBJ30688.1	7.300e-120	83.08	conserved unknown protein [Ectocarpus siliculosus]	[more]
OQS01040.1	9.800e-117	80.38	ribosome biogenesis protein NSA2 [Achlya hypogyna]	[more]
OQS07100.1	2.200e-116	80.00	ribosome biogenesis protein NSA2 [Thraustotheca cl...	[more]
XP_008608269.1	4.900e-116	79.62	ribosome biogenesis protein N [Saprolegnia diclina...	[more]
XP_008862009.1	1.400e-115	79.62	hypothetical protein H310_00853 [Aphanomyces invad...	[more]
XP_002907883.1	1.600e-114	78.85	ribosome biogenesis protein NSA2 [Phytophthora inf...	[more]
XP_009036538.1	1.300e-113	79.23	hypothetical protein AURANDRAFT_60066 [Aureococcus...	[more]
XP_024584079.1	1.300e-113	78.46	ribosome biogenesis protein nsa2 [Plasmopara halst...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL091	nonsL091	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL088	nonsL088	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR049	ncniR049	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR147	ngnoR147	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR144	ngnoR144	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK000013	NSK000013	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO06G04350.1	NO06G04350.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
Naga_100144g5	gene4077	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO06G04350.1	NO06G04350.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO06G04350 ID=NO06G04350|Name=NO06G04350|organism=Nannochloropsis oceanica|type=gene|length=2898bp
AAACAATAGGCAGCTCGTGGTTGGTCAAGGAAGAAGCAAAACACAAGGAG
CGACTGTCGTCGTATCCAGTCCAGAAGTAGCGCGCACTCCCTACGCATCA
GAGCCTTACAGATCAGCAACCATGgtacgtctgccagaaggaggagactg
tgatgacttttttagggggggaggcttaccgtcaatgctccaagtccacg
cagtagttgagtctactgtgcactatcatcttcctcctcaccctccctgc
ctccctcttttcctcgcatgaccacagCCGCAACATGACTACATGGAGCA
ACACCGGAAGAAGCACGGGGAGCGCCTCGACCGGGAGGAGCGACTgtacg
ttaagagggctgggggcaaagggggaagggagtatgggagaaaggagggg
atggggtgggaggcgatgctgtgtcaacgtgtccactcaaggtgaatttt
ttccacccgcgggcatacgccaagttatgcctggcacctctctcattgat
gttcctcacgagctagtaaaggtctctaaacgctttgactatatcgtcat
caagtcgatttccctcacttccttccccctcctttcccttcctcccgttc
tcccaccctcctccccttttaccccgacagGCGCAAGAAGGAGGCGCGTG
AGGTGCACCGTCGCTCCAGATTCGCGCAGAAAGTACACGGGCTGAGGGCC
AAGCTGTACAATGCCAAGCGCTATAAGGAGAAGGCCCAGATGCGCAAGAC
gtacgtatcttatgcccctcttatcccactctcctttcccccagccttgg
tcttctgcaccattcaccctcttcctgctccctctctcctccctgctctt
cgtcctcttcccactgctcgcccatgcttgctcatcataccacaacaact
tttaatcccgctttccttccctccttcccaatctccctccctccctccct
ccctctccttccagCCTGGCCATGCACCAGGAGAAGACGAACAAACACGC
CAACGAGGAGGGCGCGCCAGAGGGGGCCGTTCCCGCCTACCTGATCGACC
GAGAGGGCGTCTCACGGGCGAAAgtaagggagtgggggagggagcggggg
atggatggggagcagtggcttgagggttatgtgtgggatgcctggcaacg
acgacttatccttctttaacccatccctccctccctccctccctccctcc
ctccctccctctcccctacctccagGTCCTTTCCAACACGGTCAAGCAAA
AGCGGGCGGAGCGGGCAGGGAAGTGGAGCGTGCCGCTGCCCAAGGTGAAG
CCGGTGGCCGACGACGAGATGTTCCGGGTCATGCAGTCGGGCAAACGCAA
GGgtacgtccgttaccccctcccttcctcccgcccgccctcccttccctc
cctctccggtttggtcacgcggatcatcataaacgcctcctgtctcccct
ccctccctctctccctccagCCAAGTCATGGAAGCGGATGGTGACCAAGG
TCACTTTCGTCGGCGAAAACTTCACCCGCAAAGCTCCCAAgtaggtggag
ggagggagggagggagggagggagggagggagggagggagggagggaagg
agggaagaaggaggggtagtttaacagggagggagggagggagggaagga
gggaaggagggaaggagggagggaaggagggcttgcacggaatatacagg
tgtctacctgttgatggatatttggaacacgccgaagaggcatccgcatt
gatgccgtgcgggttccacttacacccctcctcctccccctccctccctc
cctccctttctccctccctccctcctttagGTTCGAACGTTTCATTCGCC
CTACCGGCCTGCGCTTCAAGAAGGCCCATGTCACCCACCCGGACCTGCAG
gtaggccctcccaccctccctcccttccaatggacacactacgcgccatt
cctcccttgccttgtcttaccccccctccctccttccctccctccctccg
ctttgcagGCGACCTTCTGCCTGGATATCTTGGGCGTGAAAAAGAATCCC
TCCTCGCCCATGTACACCACTCTCGGAGTCATCACGAAGGGCACCGTCAT
CGAGgtagggggggagggagggaggggggaagggaaagtcagggcccagc
aggccgagacatcgttgccttcatctctctttcagccatctggactccct
ctcatgcttcttaccctccctccctccctccctgtctagGTGAACGTATC
GGAGTTGGGCTTGGTGACGACGAGTGGGAAAGTTGTGTGGGGGAAATACG
CTCAAgtaggttcgagggagggaggaagggagggaggaagggaatggaaa
ggagtgaaaagaattgaggatacatattggacgcatcattgactctctcg
tctctttgctacttcctccctccttcctttcctccctccttccctccctc
cctcccttcagGTGACCAATAATCCGGAATTGGATGGCTGCATCAACGCA
GTGCTCCTCGTCTAAGCAGCCTTCCCTCCCTTCCTCCCTTCCTTCCTCCT
CCTCCTCCTATTTCTACTCCTATTCCCCGTTGTAAGATAGAAGTGATTCG
ATCCCTTTTCCCTCCTCTCCAGTACAAGAAAAATAGACAAGCCACAGTTG
AAGAAAGAAGAAAGAGAAGGAAAAGAAGGAGAGAAAAAAAAATAGTTGAA
GAACAAGAAAGAGCGTTATGACGTTAAGAGGAAAGAAGAAAACCGTTTTT
CAAAGGGGCGTTTATTTCTTTTTGTATTTCCTAACCGTCCGTAGCTCTCC
TCCCTCTGCAAACTCTCTTGTCTTAGATCACTGTCGTACAACCAACCCTG
CCTTTCCTCCTCCTCCTCCATCTCCTCCTTCTCCTCCTCCGCCTCTTG

protein sequence of NO06G04350.1

>NO06G04350.1-protein ID=NO06G04350.1-protein|Name=NO06G04350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=261bp
MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSRFAQKVHGLRAKLY
NAKRYKEKAQMRKTLAMHQEKTNKHANEEGAPEGAVPAYLIDREGVSRAK
VLSNTVKQKRAERAGKWSVPLPKVKPVADDEMFRVMQSGKRKAKSWKRMV
TKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVK
KNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPEL
DGCINAVLLV*

Synonyms

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