NO06G04310, NO06G04310 (gene) Nannochloropsis oceanica

Overview
NameNO06G04310
Unique NameNO06G04310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3397
Alignment locationchr6:1209060..1212456 +

Link to JBrowse

Properties
Property NameValue
DescriptionLL-diaminopimelate aminotransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1209060..1212456 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008483transaminase activity
GO:0030170pyridoxal phosphate binding
GO:0016740transferase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR015424PyrdxlP-dep_Trfase
IPR019942DapL_aminotrans
IPR004839Aminotransferase_I/II
Homology
BLAST of NO06G04310 vs. NCBI_GenBank
Match: XP_005855409.1 (LL-diaminopimelate aminotransferase [Nannochloropsis gaditana CCMP526] >EKU20940.1 LL-diaminopimelate aminotransferase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 754.6 bits (1947), Expect = 1.800e-214
Identity = 375/448 (83.71%), Postives = 405/448 (90.40%), Query Frame = 0
Query:    1 MMRQTLLLALALLATSSHAFLAPLPTATATRARSAG-VMHMSGVERNPNFDKLVGGYLFPEIGRRRTAFLEANPTAKIISLGIGDTTQPIPPHILSGLVQGAARLGTPEGYSGYGDEKGAGMLREKIAAKLYGNRITADEVFVSDGAKCDIGRLQMMFGQNVVTAVQDPSYPVYVDTAVIMGQTGGIDEESRQFDGIVYMPCTPSNDFFPDLTKLSKRPDVIYFCSPNNPTGVSATRAQLESLVAYARAQGSIIVFDAAYAPFIRDPALPKSIFEIEGALECAIEVNSFSKYAGFTGVRLGWTVVPKQLKFKDGSSVHSDFNRIMGTAFNGASNVVQPGGLAILDDEGMAEIQTLINYYLANAAKLRQTVEAMGYKAYGGDNGPYVYVDLGGKSSWDMFSEILEKAQIVTTPGAGFGPGGEGFLRLSAFASKENVEEACERLQKVMAK 448
            MMRQ  LLA+AL ATSS AFL P P    +R      V+ MSGVERNPNF KL+GGYLFPEI RRR+AFLEANP AKIISLGIGDTTQPIPPHILSGLV GA++LGTP GYSGYG ++G   LREKIA+ LYGNRI  D+VFVSDGAKCDIGRLQ+MFG+NVVTAVQDPSYPVYVDTAVIMGQTG I+E+SRQFDGIVYMPC P NDFFPDL  L +RPDVIYFCSPNNPTGV+ATR QLE+LV+YAR QGS+IVFDAAYAPFIRDP+LPKSIFEIEGALECAIEVNSFSKYAGFTGVRLGWTVVPKQLKF+DGSS+H+DFNR+M T FNGASN+VQ GGLAILD EG+AEIQTLI+YYLANAAKLR TVEAMGYKAYGGDNGPYVYVDLGGKSSWD+FSEILEKAQIVTTPGAGFGPGGEGFLRLSAFASKENV+EACERLQKVM K
Sbjct:    1 MMRQVALLAVALCATSSLAFLTPPPRPVRSRCGVRDRVLQMSGVERNPNFGKLMGGYLFPEIARRRSAFLEANPEAKIISLGIGDTTQPIPPHILSGLVHGASKLGTPPGYSGYGPDQGVKDLREKIASTLYGNRIDPDDVFVSDGAKCDIGRLQVMFGKNVVTAVQDPSYPVYVDTAVIMGQTGLINEQSRQFDGIVYMPCNPGNDFFPDLAALPQRPDVIYFCSPNNPTGVAATRPQLEALVSYAREQGSVIVFDAAYAPFIRDPSLPKSIFEIEGALECAIEVNSFSKYAGFTGVRLGWTVVPKQLKFRDGSSMHADFNRMMSTTFNGASNIVQDGGLAILDKEGLAEIQTLISYYLANAAKLRATVEAMGYKAYGGDNGPYVYVDLGGKSSWDVFSEILEKAQIVTTPGAGFGPGGEGFLRLSAFASKENVDEACERLQKVMVK 448          
BLAST of NO06G04310 vs. NCBI_GenBank
Match: EWM26452.1 (ll-diaminopimelate aminotransferase [Nannochloropsis gaditana])

HSP 1 Score: 753.4 bits (1944), Expect = 3.900e-214
Identity = 374/448 (83.48%), Postives = 405/448 (90.40%), Query Frame = 0
Query:    1 MMRQTLLLALALLATSSHAFLAPLPTATATRARSAG-VMHMSGVERNPNFDKLVGGYLFPEIGRRRTAFLEANPTAKIISLGIGDTTQPIPPHILSGLVQGAARLGTPEGYSGYGDEKGAGMLREKIAAKLYGNRITADEVFVSDGAKCDIGRLQMMFGQNVVTAVQDPSYPVYVDTAVIMGQTGGIDEESRQFDGIVYMPCTPSNDFFPDLTKLSKRPDVIYFCSPNNPTGVSATRAQLESLVAYARAQGSIIVFDAAYAPFIRDPALPKSIFEIEGALECAIEVNSFSKYAGFTGVRLGWTVVPKQLKFKDGSSVHSDFNRIMGTAFNGASNVVQPGGLAILDDEGMAEIQTLINYYLANAAKLRQTVEAMGYKAYGGDNGPYVYVDLGGKSSWDMFSEILEKAQIVTTPGAGFGPGGEGFLRLSAFASKENVEEACERLQKVMAK 448
            MMR+  LLA+AL ATSS AFL P P    +R      V+ MSGVERNPNF KL+GGYLFPEI RRR+AFLEANP AKIISLGIGDTTQPIPPHILSGLV GA++LGTP GYSGYG ++G   LREKIA+ LYGNRI  D+VFVSDGAKCDIGRLQ+MFG+NVVTAVQDPSYPVYVDTAVIMGQTG I+E+SRQFDGIVYMPC P NDFFPDL  L +RPDVIYFCSPNNPTGV+ATR QLE+LV+YAR QGS+IVFDAAYAPFIRDP+LPKSIFEIEGALECAIEVNSFSKYAGFTGVRLGWTVVPKQLKF+DGSS+H+DFNR+M T FNGASN+VQ GGLAILD EG+AEIQTLI+YYLANAAKLR TVEAMGYKAYGGDNGPYVYVDLGGKSSWD+FSEILEKAQIVTTPGAGFGPGGEGFLRLSAFASKENV+EACERLQKVM K
Sbjct:    1 MMREVALLAVALCATSSLAFLTPPPRPVRSRCGVRDRVLQMSGVERNPNFGKLMGGYLFPEIARRRSAFLEANPEAKIISLGIGDTTQPIPPHILSGLVHGASKLGTPPGYSGYGPDQGVKDLREKIASTLYGNRIDPDDVFVSDGAKCDIGRLQVMFGKNVVTAVQDPSYPVYVDTAVIMGQTGLINEQSRQFDGIVYMPCNPGNDFFPDLAALPQRPDVIYFCSPNNPTGVAATRPQLEALVSYAREQGSVIVFDAAYAPFIRDPSLPKSIFEIEGALECAIEVNSFSKYAGFTGVRLGWTVVPKQLKFRDGSSMHADFNRMMSTTFNGASNIVQDGGLAILDKEGLAEIQTLISYYLANAAKLRATVEAMGYKAYGGDNGPYVYVDLGGKSSWDVFSEILEKAQIVTTPGAGFGPGGEGFLRLSAFASKENVDEACERLQKVMVK 448          
BLAST of NO06G04310 vs. NCBI_GenBank
Match: CBJ29029.1 (LL-diaminopimelate aminotransferase diaminopimelate aminotransferase [Ectocarpus siliculosus])

HSP 1 Score: 595.1 bits (1533), Expect = 1.800e-166
Identity = 303/461 (65.73%), Postives = 359/461 (77.87%), Query Frame = 0
Query:    8 LALALLATSSHAFL-----------APLPTAT----ATRARSAGVMHM------SGVERNPNFDKLVGGYLFPEIGRRRTAFLEANPTAK-IISLGIGDTTQPIPPHILSGLVQGAARLGTPEGYSGYGDEKGAGMLREKIAAKLYGNRITADEVFVSDGAKCDIGRLQMMFGQNVVTAVQDPSYPVYVDTAVIMGQTGGIDEESRQFDGIVYMPCTPSNDFFPDLTKLSKRPDVIYFCSPNNPTGVSATRAQLESLVAYARAQGSIIVFDAAYAPFIRDPALPKSIFEIEGALECAIEVNSFSKYAGFTGVRLGWTVVPKQLKFKDGSSVHSDFNRIMGTAFNGASNVVQPGGLAILDDEGMAEIQTLINYYLANAAKLRQTVEAMGYKAYGGDNGPYVYVDLGGKSSWDMFSEILEKAQIVTTPGAGFGPGGEGFLRLSAFASKENVEEACERLQKVMA 447
            + L+LLA    AF+           AP PT+     ++R R++  M        +GV+RN NF KL  GYLFP I +RR A+LEANP  + IISLGIGDTTQPIPPHILSGLV GA  LGT EGY+GYG E+G   +REKI+ KLY   I  DEVFVSDGAKCDIGRLQMMFG  VV+AVQDPSYPVYVDT+V++GQTG ++EE+ Q+D IVYMPC PSNDFFPDL K     DVIYFCSPNNPTG  ATR QLE+LVA+A A+GSI+VFDAAYAPFIR P +PKSIFEIEG+  C IEVNSFSKYAGFTG RLGWTV+P ++KF DG+ V +DFNR+M TAFNGASN+VQ GG+  LDDEGMAEI TL++YYL NA  L++ +E+ G+K++GG + PYVYVDL GK+SWD+FSEILEKAQ+VT PGAGFGPGGEGFLRLSAFA +E+  EA ERL+ V+A
Sbjct:    9 VCLSLLAAPGLAFVGTPFIAQQVRHAPAPTSRSVTGSSRPRASTRMVATPDKVGTGVKRNENFAKLKAGYLFPGIAKRRNAYLEANPDCRPIISLGIGDTTQPIPPHILSGLVGGAKTLGTKEGYTGYGAEQGKADIREKISEKLYNGLIKPDEVFVSDGAKCDIGRLQMMFGSGVVSAVQDPSYPVYVDTSVMVGQTGEVNEETMQYDNIVYMPCKPSNDFFPDL-KALPHADVIYFCSPNNPTGAVATREQLEALVAHANAKGSIVVFDAAYAPFIRTPGVPKSIFEIEGSRTCCIEVNSFSKYAGFTGARLGWTVIPNEVKFSDGTPVRNDFNRVMTTAFNGASNIVQSGGMTCLDDEGMAEIDTLMDYYLENAKILKEGIESCGFKSHGGKDAPYVYVDLEGKASWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAVLA 468          
BLAST of NO06G04310 vs. NCBI_GenBank
Match: EJK62555.1 (hypothetical protein THAOC_16827 [Thalassiosira oceanica])

HSP 1 Score: 581.6 bits (1498), Expect = 2.000e-162
Identity = 298/444 (67.12%), Postives = 345/444 (77.70%), Query Frame = 0
Query:    6 LLLALALLATSSHAFLAPLPTATATRARSAGVMHMSGVERNPNFDKLVGGYLFPEIGRRRTAFLEANP--TAKIISLGIGDTTQPIPPHILSGLVQGAARLGTPEGYSGYGDEKGAGMLREKIAAKLYGNRITADEVFVSDGAKCDIGRLQMMFGQNVVTAVQDPSYPVYVDTAVIMGQTGGIDEESRQFDGIVYMPCTPSNDFFPDLTKLSKRPDVIYFCSPNNPTGVSATRAQLESLVAYARAQGSIIVFDAAYAPFIRDPALPKSIFEIEGALECAIEVNSFSKYAGFTGVRLGWTVVPKQLKFKDGSSVHSDFNRIMGTAFNGASNVVQPGGLAILDDEGMAEIQTLINYYLANAAKLRQTVEAMGYKAYGGDNGPYVYVDL-GGKSSWDMFSEILEKAQIVTTPGAGFGPGGEGFLRLSAFASKENVEEACERLQKVMA 447
            L LA +++A +  AF      A A   RS+  +H SGV RNPNF KL GGYLFPEIGRRRTA+L  NP    +IISLGIGDTTQPIP HILSGLV  A++LGT EGYSGYG E+G G LR KIA KLY   I ADEVFVSDGAKCDI R+Q +FG  V TAVQDPSYPVYVDT+V+MGQTG I+ E+ Q+D IVYMPCT  N+FFPD+  L  R D++YFCSPNNPTG +ATR QLE LV   + +GSI+VFDAAYAPFIR   +PKSIFEI+GA E AIE NSFSKYAGFTGVRLGWTVVP +L F DG+ V  DFNR+M TAFNGASN+VQ GGLA LDDEG+ EI TLI+YYL NA  L++ +E++GY  +GG + PYV+V L  GK SWD FSEILEK Q+VT PGAGFGPGGEG+LRLSAFA ++ V EACERL+K MA
Sbjct:    3 LSLAFSMIAVAG-AF------APAQNGRSSTELH-SGVTRNPNFAKLAGGYLFPEIGRRRTAYLAENPDMADRIISLGIGDTTQPIPEHILSGLVGSASKLGTKEGYSGYGAEQGMGDLRAKIAEKLYDGNIKADEVFVSDGAKCDIMRVQQVFGPGVTTAVQDPSYPVYVDTSVMMGQTGDINSETSQYDNIVYMPCTAENNFFPDIENL-PRADIVYFCSPNNPTGAAATREQLEMLVKVCKERGSILVFDAAYAPFIRSEGVPKSIFEIDGAREVAIECNSFSKYAGFTGVRLGWTVVPDELTFSDGTKVRDDFNRVMTTAFNGASNIVQGGGLACLDDEGLTEINTLIDYYLENAKLLKEAMESIGYDVFGGADAPYVFVKLPDGKKSWDTFSEILEKTQVVTIPGAGFGPGGEGYLRLSAFAPRDTVIEACERLKKAMA 437          
BLAST of NO06G04310 vs. NCBI_GenBank
Match: XP_002285992.1 (aspartate aminotransferase [Thalassiosira pseudonana CCMP1335] >EED95633.1 aspartate aminotransferase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 579.3 bits (1492), Expect = 1.000e-161
Identity = 286/409 (69.93%), Postives = 329/409 (80.44%), Query Frame = 0
Query:   40 MSGVERNPNFDKLVGGYLFPEIGRRRTAFLEANP--TAKIISLGIGDTTQPIPPHILSGLVQGAARLGTPEGYSGYGDEKGAGMLREKIAAKLYGNRITADEVFVSDGAKCDIGRLQMMFGQNVVTAVQDPSYPVYVDTAVIMGQTGGIDEESRQFDGIVYMPCTPSNDFFPDLTKLSKRPDVIYFCSPNNPTGVSATRAQLESLVAYARAQGSIIVFDAAYAPFIRDPALPKSIFEIEGALECAIEVNSFSKYAGFTGVRLGWTVVPKQLKFKDGSSVHSDFNRIMGTAFNGASNVVQPGGLAILDDEGMAEIQTLINYYLANAAKLRQTVEAMGYKAYGGDNGPYVYVDL-GGKSSWDMFSEILEKAQIVTTPGAGFGPGGEGFLRLSAFASKENVEEACERLQKVM 446
            MS V RNPNF KLVGGYLFPEIGRRR A+L  NP   ++IISLGIGDTTQPIP HILSGLV  A++LGT EGYSGYG E+G G LR KIA KLY   I   EVFVSDGAKCDI R+Q +FG  VVTAVQDPSYPVYVDT+V+MGQTG I+  + Q+D IVYMPC   NDFFPD+ + + R D++YFCSPNNPTG +AT+ QLE LV   + +GSI+VFDAAYAPFIR   +PKSIFEIEGA E AIE NSFSKYAGFTGVRLGWTVVP +L F DGS V  DFNR+M TAFNGASN+VQ GGLA LDDEG+AEI TLI+YYL NA  L++ +E++GYK YGG + PYV+V L  GKSSWD FSEILEKAQ+VT PGAGFGPGGEG+LRLSAFA ++ V EAC RL++ +
Sbjct:    1 MSKVVRNPNFAKLVGGYLFPEIGRRRNAYLAENPEMASRIISLGIGDTTQPIPDHILSGLVNSASKLGTKEGYSGYGAEQGMGDLRAKIADKLYNGIIKDSEVFVSDGAKCDIMRVQQVFGPGVVTAVQDPSYPVYVDTSVMMGQTGDINSSTNQYDNIVYMPCNAENDFFPDI-ESTPRADIVYFCSPNNPTGAAATKEQLEKLVKVCKERGSILVFDAAYAPFIRSEGVPKSIFEIEGAREVAIECNSFSKYAGFTGVRLGWTVVPDELTFADGSKVRDDFNRVMTTAFNGASNIVQGGGLACLDDEGLAEIDTLIDYYLENAKLLKEAMESIGYKVYGGTDAPYVFVKLPEGKSSWDTFSEILEKAQVVTIPGAGFGPGGEGYLRLSAFAPRDTVIEACSRLKETL 408          
BLAST of NO06G04310 vs. NCBI_GenBank
Match: GAX24847.1 (LL-diaminopimelate aminotransferase [Fistulifera solaris])

HSP 1 Score: 572.8 bits (1475), Expect = 9.500e-160
Identity = 296/445 (66.52%), Postives = 340/445 (76.40%), Query Frame = 0
Query:    6 LLLALALLATSSHAFLAPLPTATATRARSAGVMHMSGVERNPNFDKLVGGYLFPEIGRRRTAFLEANPTAK--IISLGIGDTTQPIPPHILSGLVQGAARLGTPEGYSGYGDEKGAGMLREKIAAKLYGNRITADEVFVSDGAKCDIGRLQMMFGQNVVTAVQDPSYPVYVDTAVIMGQTGGIDEESRQFDGIVYMPCTPSNDFFPDLTKLSKRPDVIYFCSPNNPTGVSATRAQLESLVAYARAQGSIIVFDAAYAPFIRDPALPKSIFEIEGALECAIEVNSFSKYAGFTGVRLGWTVVPKQLKFKDGSSVHSDFNRIMGTAFNGASNVVQPGGLAILDDEGMAEIQTLINYYLANAAKLRQTVEAMGYKAYGGDNGPYVYVDLGGK--SSWDMFSEILEKAQIVTTPGAGFGPGGEGFLRLSAFASKENVEEACERLQKVMA 447
            L +A + L  SS AF    P   +TRA +      +GVERN NF KL GGYLFPEI RRRT++LE NP  K  +ISLGIGDTTQPIPPHIL+GLV+GA +LGT EGYSGYG E+G   LR KIA KLY   I+ADEVFVSDGAK DI RLQ MFG  VV+AVQDPSYPVYVDT+VIMGQTG  D  S+Q+D ++YMPCTP N FFPD + +  R D++Y CSPNNPTG +AT+ QLE LV   + +GSI+VFDAAYAPFIR   +PKSIFEIEGA E AIEVNSFSKYAGFTGVRLGWTV+P  LKFKDGS V +DFNRIM T FNGASN+VQ GGLA LDDEG+AEI  LI+YYL NA  LR+T E +GY  YGG + PYV+V L      SWD F  ILEK Q+VT PGAGFGPGGEGFLRLSAFA +E V EAC+RL++ +A
Sbjct:    3 LSIAFSFLLASSTAFHLQSP---STRASAL----YAGVERNANFAKLAGGYLFPEIARRRTSYLEENPEMKDRVISLGIGDTTQPIPPHILNGLVEGAKQLGTKEGYSGYGAEQGMQSLRAKIAEKLYNGIISADEVFVSDGAKPDIMRLQQMFGPKVVSAVQDPSYPVYVDTSVIMGQTGEQDTNSKQYDKVIYMPCTPENGFFPDYSSV-PRADIVYLCSPNNPTGAAATKEQLEGLVKLCKERGSILVFDAAYAPFIRSEGVPKSIFEIEGAREVAIEVNSFSKYAGFTGVRLGWTVIPGDLKFKDGSLVRNDFNRIMTTTFNGASNIVQAGGLACLDDEGLAEIDALIDYYLKNANILRETFEKIGYDVYGGVDAPYVFVKLPASMGGSWDAFQTILEKTQVVTIPGAGFGPGGEGFLRLSAFAPREAVVEACKRLEEALA 439          
BLAST of NO06G04310 vs. NCBI_GenBank
Match: XP_009034889.1 (hypothetical protein AURANDRAFT_36703 [Aureococcus anophagefferens] >EGB10053.1 hypothetical protein AURANDRAFT_36703 [Aureococcus anophagefferens])

HSP 1 Score: 572.0 bits (1473), Expect = 1.600e-159
Identity = 287/415 (69.16%), Postives = 327/415 (78.80%), Query Frame = 0
Query:   32 ARSAGVMHMSGVERNPNFDKLVGGYLFPEIGRRRTAFLEANP--TAKIISLGIGDTTQPIPPHILSGLVQGAARLGTPEGYSGYGDEKGAGMLREKIAAKLYGNRITADEVFVSDGAKCDIGRLQMMFGQNVVTAVQDPSYPVYVDTAVIMGQTGGIDEESRQFDGIVYMPCTPSNDFFPDLTKLSKRPDVIYFCSPNNPTGVSATRAQLESLVAYARAQGSIIVFDAAYAPFIRDPALPKSIFEIEGALECAIEVNSFSKYAGFTGVRLGWTVVPKQLKFKDGSSVHSDFNRIMGTAFNGASNVVQPGGLAILDDEGMAEIQTLINYYLANAAKLRQTVEAMGYKAYGGDNGPYVYVDLGGKSSWDMFSEILEKAQIVTTPGAGFGPGGEGFLRLSAFASKENVEEACERLQKV 445
            A SAG ++   V RN NF KL GGYLFPEIGRRRTAF E NP    KIISLGIGDTT+PIP HILSGLV GA +LGT EGYSGYG E+G G LREKIAA  YG+R+ A EVFVSDGAKCDI RLQ+MFG +VV+AVQDPSYPVYVDT+V+MGQTG +++E+ QFD +VYMPC  ++DFFPDL K+  R DV YFCSPNNPTG  ATRAQLE+LVA A   GSI+VFDAAYAPFIR    P SIFEIEG+ +CAIEVNSFSKYAGFTG RLGWTVVP +L + DGSSV  DFNR+M T FNGASN+VQ GG+A LD EG  EI TLI+YYL NA  LR   + +G   YGG + PYV+VDL G SSWD FS ILE+AQ+VT PGAGFGPGGEG+LR SAFA +E   EA ER+ K+
Sbjct:   13 AASAGALN---VVRNKNFGKLQGGYLFPEIGRRRTAFAEKNPELAEKIISLGIGDTTKPIPEHILSGLVNGAKKLGTVEGYSGYGAEQGKGDLREKIAASCYGDRVKASEVFVSDGAKCDISRLQLMFGSDVVSAVQDPSYPVYVDTSVMMGQTGEVNKETGQFDKLVYMPCAAADDFFPDLAKV-PRADVYYFCSPNNPTGAVATRAQLEALVARALKDGSILVFDAAYAPFIRSEGTPTSIFEIEGSRQCAIEVNSFSKYAGFTGARLGWTVVPDELTYSDGSSVRDDFNRVMTTGFNGASNIVQEGGMACLDPEGKKEIDTLIDYYLGNAEILRGLADDLGLDHYGGVDSPYVFVDLKGHSSWDTFSTILEEAQVVTIPGAGFGPGGEGYLRFSAFAPREACLEARERISKI 423          
BLAST of NO06G04310 vs. NCBI_GenBank
Match: XP_002183711.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44893.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 572.0 bits (1473), Expect = 1.600e-159
Identity = 291/446 (65.25%), Postives = 343/446 (76.91%), Query Frame = 0
Query:    6 LLLALALLATSSHAFLAPLPTATATRARSAGVMHMSGVERNPNFDKLVGGYLFPEIGRRRTAFLEANPTAK--IISLGIGDTTQPIPPHILSGLVQGAARLGTPEGYSGYGDEKGAGMLREKIAAKLYGNRITADEVFVSDGAKCDIGRLQMMFGQNVVTAVQDPSYPVYVDTAVIMGQTGGIDEESRQFDGIVYMPCTPSNDFFPDLTKLSKRPDVIYFCSPNNPTGVSATRAQLESLVAYARAQGSIIVFDAAYAPFIRDPALPKSIFEIEGALECAIEVNSFSKYAGFTGVRLGWTVVPKQLKFKDGSSVHSDFNRIMGTAFNGASNVVQPGGLAILDDEGMAEIQTLINYYLANAAKLRQTVEAMGYKAYGGDNGPYVYVDL----GGKSSWDMFSEILEKAQIVTTPGAGFGPGGEGFLRLSAFASKENVEEACERLQKVM 446
            L LAL+ + T + AF+   P    + A S   +   GVERNPNF KL+GGYLFPEIGRRRT +LE NP  K  +ISLGIGDTTQPIP +ILSGLV GA++LGT EGYSGYG+E G   LREKIA KLY   I A+EVFVSDGAKCDI RLQ MFG  V++AVQDPSYPVYVDT+V+MGQTG ID E+ Q+  IVYMPCT  N FFPD   +  R D++Y CSPNNPTG +AT+ QL  +V   + +GSI+VFDAAYAPFIR   +PKSIFEIEGA + AIEVNSFSKYAGFTGVRLGWTV+P  LKF DG+ V +DFNR+M TAFNGASN+VQ GGLA LDD+G+ EI TLI+YYL NA  LR+T+E++GY  YGG + PYV+V L    GG  SWD F  ILEK Q+VT PGAGFGPGGEG+LRLSAFA +++V EACERL+K +
Sbjct:    3 LSLALSFVVTGASAFVPQQPLTPRSPATSLAAV---GVERNPNFAKLIGGYLFPEIGRRRTQYLEENPEMKDRVISLGIGDTTQPIPEYILSGLVGGASKLGTKEGYSGYGNEAGMLDLREKIADKLYKGIIAAEEVFVSDGAKCDIMRLQQMFGAKVISAVQDPSYPVYVDTSVMMGQTGEIDSETNQYKNIVYMPCTSENGFFPDYASM-PRADIVYLCSPNNPTGAAATKEQLVEMVKLCKERGSILVFDAAYAPFIRSKDVPKSIFEIEGARDVAIEVNSFSKYAGFTGVRLGWTVIPNNLKFADGTPVRNDFNRVMSTAFNGASNIVQAGGLACLDDDGLKEIDTLIDYYLGNAKILRETMESIGYDVYGGIDAPYVFVKLPESMGG--SWDAFQTILEKTQVVTIPGAGFGPGGEGYLRLSAFAPRDSVIEACERLKKAL 442          
BLAST of NO06G04310 vs. NCBI_GenBank
Match: GAX09421.1 (LL-diaminopimelate aminotransferase [Fistulifera solaris])

HSP 1 Score: 572.0 bits (1473), Expect = 1.600e-159
Identity = 293/443 (66.14%), Postives = 337/443 (76.07%), Query Frame = 0
Query:    8 LALALLATSSHAFLAPLPTATATRARSAGVMHMSGVERNPNFDKLVGGYLFPEIGRRRTAFLEANPTAK--IISLGIGDTTQPIPPHILSGLVQGAARLGTPEGYSGYGDEKGAGMLREKIAAKLYGNRITADEVFVSDGAKCDIGRLQMMFGQNVVTAVQDPSYPVYVDTAVIMGQTGGIDEESRQFDGIVYMPCTPSNDFFPDLTKLSKRPDVIYFCSPNNPTGVSATRAQLESLVAYARAQGSIIVFDAAYAPFIRDPALPKSIFEIEGALECAIEVNSFSKYAGFTGVRLGWTVVPKQLKFKDGSSVHSDFNRIMGTAFNGASNVVQPGGLAILDDEGMAEIQTLINYYLANAAKLRQTVEAMGYKAYGGDNGPYVYVDLGGK--SSWDMFSEILEKAQIVTTPGAGFGPGGEGFLRLSAFASKENVEEACERLQKVMA 447
            +A + L  SS AF    P+ T++ A  A      GVERN NF KL GGYLFPEI RRRT++LE NP  K  +ISLGIGDTTQPIPPHIL+GLV+GA +LGT EGYSGYG E+G   LR KIA KLY   I ADEVFVSDGAK DI RLQ MFG  VV+AVQDPSYPVYVDT+VIMGQTG  D   +Q++ ++YMPCTP N FFPD + +  R D++Y CSPNNPTG +AT+ QLE LV   + +GSI+VFDAAYAPFIR   +PKSIFEIEGA E AIEVNSFSKYAGFTGVRLGWTV+P  LKFKDGS V +DFNRIM T FNGASN+VQ GGLA LDDEG+AEI  LI+YYL NA  LR+T E +GY  YGG + PYV+V L      SWD F  ILEK Q+VT PGAGFGPGGEGFLRLSAFA +E V EAC+RL++ +A
Sbjct:   59 IAFSFLFASSTAFHLQNPSTTSSSALYA------GVERNANFAKLAGGYLFPEIARRRTSYLEENPAMKDRVISLGIGDTTQPIPPHILNGLVEGAKQLGTKEGYSGYGAEQGMQKLRAKIAEKLYNGIIAADEVFVSDGAKPDIMRLQQMFGPKVVSAVQDPSYPVYVDTSVIMGQTGEQDTNLKQYENVIYMPCTPENGFFPDYSSV-PRADIVYLCSPNNPTGAAATKEQLEGLVKLCKERGSILVFDAAYAPFIRSEGVPKSIFEIEGAREVAIEVNSFSKYAGFTGVRLGWTVIPGDLKFKDGSLVRNDFNRIMTTTFNGASNIVQAGGLACLDDEGLAEIDALIDYYLKNANILRETFEKIGYDVYGGVDAPYVFVKLPASMGGSWDAFQTILEKTQVVTIPGAGFGPGGEGFLRLSAFAPREAVVEACKRLEEALA 494          
BLAST of NO06G04310 vs. NCBI_GenBank
Match: KOO24755.1 (ll-diaminopimelate aminotransferase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 565.1 bits (1455), Expect = 2.000e-157
Identity = 291/448 (64.96%), Postives = 350/448 (78.12%), Query Frame = 0
Query:    6 LLLALALLATSSHAFLAPLP-TATATRARSAGVMHMSGVERNPNFDKLVGGYLFPEIGRRRTAFLEANP-TAKIISLGIGDTTQPIPPHILSGLVQGAARLGTPEGYSGYGDEKGAGMLREKIAAKLYGNRITADEVFVSDGAKCDIGRLQMMFGQNVVTAVQDPSYPVYVDTAVIMGQTGGIDEESRQFDGIVYMPCTPSNDFFPDLTKLSKRPDVIYFCSPNNPTGVSATRAQLESLVAYARAQGSIIVFDAAYAPFIRDPALPKSIFEIEGALECAIEVNSFSKYAGFTGVRLGWTVVPKQLKFKDGSSVHSDFNRIMGTAFNGASNVVQPGGLAILDDEGMAEIQTL------INYYLANAAKLRQTVEAMGYKAYGGDNGPYVYVDLGGKSSWDMFSEILEKAQIVTTPGAGFGPGGEGFLRLSAFASKENVEEACERLQKVM 446
            +L A+ LL   S AF+   P  A+A+R   +G+  MS V RN N  KL  GYLFPEIGRRRTA++EANP T  IISLGIGDTT P+P HIL+GL  GAA+LGT EGY+GYG E+G   LR KIA  LY ++I   EVFVSDG+KCDIGRLQMMFG +  TAVQDPSYPVYVDT+VIMGQTG +++E +Q++ IVYMPC P N++FPDL K + R D+IYFCSPNNPTG +A+RAQL  LV +A   GSIIVFDAAYAPFIR P +PKSIFEI GA  C+IEVNSFSKYAGFTGVRLGWTVVPK+L F DGS V +D+NRIM TAFNGASN+VQ G LA LD EG+AEI+ L      I+YY+ NA  L++T+  +G + +GGDN PY++V L G+SSWDMFS+IL +AQ+VT PGAGFGPGGEGFLRLSAFA +++  EAC+RL+ VM
Sbjct:    1 MLYAVTLLLPLS-AFVGNAPDAASASRVDQSGIA-MSAVARNVNMGKLQAGYLFPEIGRRRTAYIEANPNTRPIISLGIGDTTLPVPEHILNGLKAGAAKLGTKEGYTGYGPEQGIAQLRSKIAKNLYDDKIDPSEVFVSDGSKCDIGRLQMMFGSSTKTAVQDPSYPVYVDTSVIMGQTGLMNQERKQYENIVYMPCNPGNNWFPDL-KNTPRADIIYFCSPNNPTGAAASRAQLTELVNWANKMGSIIVFDAAYAPFIRSPDVPKSIFEIPGARTCSIEVNSFSKYAGFTGVRLGWTVVPKELTFADGSPVAADYNRIMCTAFNGASNIVQSGVLAALDPEGLAEIKALAEIKVMIDYYMENARILKETMLDIGMEVHGGDNAPYIFVGLKGQSSWDMFSKILSEAQVVTIPGAGFGPGGEGFLRLSAFAPRDSCIEACKRLRTVM 445          
The following BLAST results are available for this feature:
BLAST of NO06G04310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855409.11.800e-21483.71LL-diaminopimelate aminotransferase [Nannochlorops... [more]
EWM26452.13.900e-21483.48ll-diaminopimelate aminotransferase [Nannochlorops... [more]
CBJ29029.11.800e-16665.73LL-diaminopimelate aminotransferase diaminopimelat... [more]
EJK62555.12.000e-16267.12hypothetical protein THAOC_16827 [Thalassiosira oc... [more]
XP_002285992.11.000e-16169.93aspartate aminotransferase [Thalassiosira pseudona... [more]
GAX24847.19.500e-16066.52LL-diaminopimelate aminotransferase [Fistulifera s... [more]
XP_009034889.11.600e-15969.16hypothetical protein AURANDRAFT_36703 [Aureococcus... [more]
XP_002183711.11.600e-15965.25predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX09421.11.600e-15966.14LL-diaminopimelate aminotransferase [Fistulifera s... [more]
KOO24755.12.000e-15764.96ll-diaminopimelate aminotransferase [Chrysochromul... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL088nonsL088Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR049ncniR049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR144ngnoR144Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000006NSK000006Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G04310.1NO06G04310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|605110gene_9606Nannochloropsis oceanica (N. oceanica CCMP1779)gene
DAPATgene4072Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G04310.1NO06G04310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G04310 ID=NO06G04310|Name=NO06G04310|organism=Nannochloropsis oceanica|type=gene|length=3397bp
AATAGGTAGCATCTTTTTGTTTTCATACTTTCCGCGGTCTTCATGATGCG
ACAAACCCTTCTCCTGGCCCTGGCCCTCCTCGCGACCTCCTCCCATGCCT
TCCTGGCGCCCTTACCTACTGCTACTGCCACCCGCGCCCGCAGCGCTGGT
GTCATGCACATGTCCGGCGTGGAGCGCAATCCGAACTTTGACAAGCTTGT
CGGCGGgtacgtatatctttacaaagtgtgatgtctgtgctcgaaccatc
cgctcgaaaaccgatttgattcctcacctttttccgacatcccgtagcct
tggtgcgcataaaatgtttcgcctgtccatgtttctttgtttttcgtacg
ctgcttattttgtccttctgtaatgtttccaaggtggtcatccttataac
cctccgccgtacctcgctcgccttcctttcccactcattttctccgttcc
ccctctactcccccctgtgaacccccttccctcagTTACTTATTCCCCGA
GATCGGCCGTCGACGCACTGCGTTTTTGGAGGCCAACCCAACCGCCAAGA
TTATCTCTCTGGGCATTGGCGACACGACCCAGCCGATCCCTCCTCACATC
CTGTCAGGCCTCGTACAGGGGGCTGCAAGGCTCGGCACGCCCGAGGGCTA
TTCCGGgtaagaagagagagagcgagctgcacgaggagagggactgagtg
gtagaagggcaccatgggttctttttcgagtcctctcgagtggaggaaaa
ggggcagagaggcttttggaaaattgcattgctgaaaagttgcagatcaa
gatgagggcttttgtcactgttcacccttgctttttattctcccccctcc
ctccttcgcttggtgccttacccagGTACGGCGACGAGAAGGGCGCGGGC
ATGCTTCGTGAGAAGATTGCGGCCAAGCTGTACGGAAACCGGATCACGGC
GGACGAGGTGTTTGTCTCGGACGGGGCCAAGTGCGACATCGGGCGGCTGC
AGATGATGTTCGGACAGAACGTGGTGACGGCCGTGCAGGACCCGTCGTAT
CCGGTGTATGTGGACACCGCCGTGATTATGGGGCAGACGGGGGGCATCGA
CGAGGAGAGCAGGCAATTCGATGgtgcgtgtgttggcggctgtattatta
ttgttatgatgattgtgtcgtacatgtggctaagatcatttgtagtgatt
agtgcaagatgctattataattatctctctgtatatatggcgagtagtag
tagtacaagtagtcgtggagggagaggaaggaggattgctgcctgtctca
gcgcagcccccccccttcactgactctccttttctcctcccccccccccc
ttcactgactctcctcttctcctccccccccttctcctcctctctcagGC
ATCGTCTACATGCCCTGCACCCCCTCCAATGACTTCTTCCCCGACCTGAC
CAAGCTCTCCAAGCGCCCGGACGTGATCTACTTCTGCTCCCCCAACAACC
CCACTGGCGTCTCAGCCACCCGCGCCCAGCTCGAGTCCCTCGTCGCCTAT
GCACGAGCGCAGGGGTCCATTATCGTCTTTGATGCCGCCTACGCGCCCTT
TATCCGCGACCCGGCCCTCCCCAAGTCCATATTCGAGATTGAGGGCGCGC
TGGAGTGTGCCATAGAGGTCAACTCCTTTTCCAAGgtgaaggggggggga
aggagggaaggacaggggcggagggtgaagaaggagatgggagtgaagga
gaggggaggaagtgtttctcaccttccggtgatgccatgtgcttcacctg
tgattttctcacctcagccttctctccctcctttctcgccccccccctcc
cttccctcctctctcccttcatcgtgttgcagTACGCGGGCTTTACGGGA
GTGCGCTTGGGCTGGACCGTCGTGCCTAAGCAGCTTAAGTTCAAGGACGG
GAGCTCGgtacgtgttaggcacgaggggaagaagggagggatggagggag
ggacaagaggagtgagggaaggaaggaaggaaggaaggaatgcgaatggg
aaagaagggaaggaagcgattttgtatgtggagttggcggggcaaggagc
ttgggaaggcatgtcaggtggacttgaatggaatgtgaggtggacttaga
aggcatgggaggtgggattggaaagtcggagtagcagcactgaggcctcc
tgctctgacactcattcgctctccctccctgcctccttccttccctccct
tccttcctcccttccttcctcccagGTGCACAGCGACTTCAACCGTATTA
TGGGCACGGCCTTCAACGGGGCCTCCAACGTGGTGCAGCCAGGTGGCCTC
GCTATCCTCGACGACGAAGGGATGGCCGAGATTCAGgtaaggaaaaaggc
agggaaggagggagggagggaaggaggaagggaggggaggagggagcaga
aggcctctatgcaggtggagtagcgtaagagactacgagttgaaaagcag
ctttctctcgtgcttcaatacgcctcgacacatttcaatattcctcaaca
tgtctcaatggctcgcctgaacctcagtcccgccctcaaacgtgccgcct
acaccccctgatgaatgcctccctcccttcctccctccctccctccctcc
agACCCTCATCAACTACTACCTGGCAAATGCGGCCAAACTCCGGCAGACG
GTGGAGGCCATGGGTTACAAGgtacgtcgatgtgctaaagggagggagcg
aggagaagtgggaaggaatgaaggacgccaatctcgcatcaaacacaagc
acgagagaggcgctgcgaggctgggtcttgtaagggagaaaatccaatgc
ggcctcgtcattcacttgtgtcattattctcctctgcttccctccccact
tttcgtgcccagGCATACGGTGGTGACAACGGCCCATACGTGTACGTGGA
TTTGGGCGGTAAGAGCAGCTGGGACATGTTCTCCGAGATTTTGGAGAAGG
CCCAGATCGTCACCACCCCGGGCGCTGGATTCGGCCCGGGAGGGGAGGGT
TTCTTGCGCCTGAGTGCCTTTGCCTCCAAAGAAAACGTTGAGGAGGCGTG
CGAGCGCTTGCAAAAGGTCATGGCCAAAAGCCAGTGAGCGGGGGGGTTGG
AGTGTGAAAGGCGAAGGGACACGTCCGTGAGGAGGGATGTGGACTGTTGT
TGCATCGAGCGTGGAAAAAGCAGTAAGAAAATACCTTGATTGAGCCTGAA
AGTAATACCCTGATTGCAAAATGTCATGGTTAAGAGCCAGTGAGAGGGGG
GGGGGGTTGAGGAGGGGCTTGGACTTTTGTTGCGAACTTGGAAACAAACA
AAAAGAAAATACCTTGATAAATCCTTAAAGTAACACCCTGAACGAAG
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protein sequence of NO06G04310.1

>NO06G04310.1-protein ID=NO06G04310.1-protein|Name=NO06G04310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=450bp
MMRQTLLLALALLATSSHAFLAPLPTATATRARSAGVMHMSGVERNPNFD
KLVGGYLFPEIGRRRTAFLEANPTAKIISLGIGDTTQPIPPHILSGLVQG
AARLGTPEGYSGYGDEKGAGMLREKIAAKLYGNRITADEVFVSDGAKCDI
GRLQMMFGQNVVTAVQDPSYPVYVDTAVIMGQTGGIDEESRQFDGIVYMP
CTPSNDFFPDLTKLSKRPDVIYFCSPNNPTGVSATRAQLESLVAYARAQG
SIIVFDAAYAPFIRDPALPKSIFEIEGALECAIEVNSFSKYAGFTGVRLG
WTVVPKQLKFKDGSSVHSDFNRIMGTAFNGASNVVQPGGLAILDDEGMAE
IQTLINYYLANAAKLRQTVEAMGYKAYGGDNGPYVYVDLGGKSSWDMFSE
ILEKAQIVTTPGAGFGPGGEGFLRLSAFASKENVEEACERLQKVMAKSQ*
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Synonyms
Publications