NO06G04100, NO06G04100 (gene) Nannochloropsis oceanica

Overview
NameNO06G04100
Unique NameNO06G04100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3433
Alignment locationchr6:1146607..1150039 -

Link to JBrowse

Properties
Property NameValue
DescriptionRibonucleoside-diphosphate reductase small chain
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1146607..1150039 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR009078Ferritin-like_SF
IPR000358RNR_small
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO06G04100 vs. NCBI_GenBank
Match: CBJ27053.1 (Ribonucleoside-diphosphate reductase small chain [Ectocarpus siliculosus])

HSP 1 Score: 509.2 bits (1310), Expect = 1.500e-140
Identity = 246/331 (74.32%), Postives = 280/331 (84.59%), Query Frame = 0
Query:  190 WVEPICRNDPSRFVLFPMKHPDLWEMYKRHEASFWTAEEVDLSQDMGDWQRLTPSEKHFVSMVLAFFASSDGIVMENLAHRFCREVQVTEARCFYGFQITMESIHQETYALLLDTYIKDPEEKAKLFNAYAEIPCIKKKASWAMRWIGSQASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSKLERTQLSRERVLEIIKEAVEVEQGFVCEALPCSLIGMNKDMMSTYILYVADRLLVALGYEKHYNVQNPFEWMELISLQGKTNFFEKRVGEYQKAGVMSKYNKSGGAGGVAPRTFSTDADF 521
            +VEPICR DPSRFVLFP+KHP+LW+MYK+ +ASFWT EEVDLSQD  DW+ LT +E+HF+SMVLAFFA+SDGIVMENL  RF +EVQ+ EARCFYGFQI MESIHQE YALLLDTYIKD +E+  LFNAY +IPC+K+KA WAMRWIGS A+FAERLVAFAAVEG+FFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L++ LE  + SRE V+ I++EAVEVE+ F+C ALPCSLIGMN  +MS YI +VADRLL +LGY K Y  QNPF+WM+LISLQGKTNFFEKRVGEYQKAGVM      GG  G   R F  DADF
Sbjct:  179 FVEPICRADPSRFVLFPIKHPELWDMYKKAKASFWTVEEVDLSQDSRDWEALTGNEQHFISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDNLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFASLE-NKPSRETVMAIVREAVEVEKSFICGALPCSLIGMNAGVMSQYIEFVADRLLGSLGYGKSYGTQNPFDWMDLISLQGKTNFFEKRVGEYQKAGVMG----GGGGPGEDRRNFRLDADF 504          
BLAST of NO06G04100 vs. NCBI_GenBank
Match: XP_005705903.1 (ribonucleotide reductase small subunit [Galdieria sulphuraria] >EME29383.1 ribonucleotide reductase small subunit [Galdieria sulphuraria])

HSP 1 Score: 480.3 bits (1235), Expect = 7.400e-132
Identity = 231/326 (70.86%), Postives = 271/326 (83.13%), Query Frame = 0
Query:  195 CRNDPSRFVLFPMKHPDLWEMYKRHEASFWTAEEVDLSQDMGDWQRLTPSEKHFVSMVLAFFASSDGIVMENLAHRFCREVQVTEARCFYGFQITMESIHQETYALLLDTYIKDPEEKAKLFNAYAEIPCIKKKASWAMRWIGSQASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSKLERTQLSRERVLEIIKEAVEVEQGFVCEALPCSLIGMNKDMMSTYILYVADRLLVALGYEKHYNVQNPFEWMELISLQGKTNFFEKRVGEYQKAGVMSKYNKSGGAGGVAPRTFSTDADF 521
            C     R+ LFP++HP++W+MYK+HEASFWTAEE+DLS D+ DW++L   E+HF+S VLAFFASSDGIV+ENLA RFCR+VQ+ EARCFYGFQI ME+IH ETY+LL+DTYI+D +EKA+LF A   IPCI+KKA WA+RWI S ASFAERLVAFAAVEGIFFSGSFC+IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS L   +L RE +  II +AV  E+ F+CE+LP +LIGMN DMMS YI +VADRLLVALGYEK++  +NPF+WMELISL+GKTNFFEKRVGEYQKAGV+   N SG A     + F  DADF
Sbjct:   59 CSGSSERYTLFPIRHPEIWKMYKKHEASFWTAEEIDLSSDLEDWKKLNADERHFISHVLAFFASSDGIVLENLAERFCRDVQIPEARCFYGFQIAMENIHSETYSLLIDTYIRDAQEKARLFEAMERIPCIEKKAQWALRWIQSSASFAERLVAFAAVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLPE-KLPRETIEAIIVDAVSCEKEFICESLPVALIGMNSDMMSQYIEFVADRLLVALGYEKYFQSRNPFDWMELISLEGKTNFFEKRVGEYQKAGVV---NDSGEA-----QEFRLDADF 375          
BLAST of NO06G04100 vs. NCBI_GenBank
Match: XP_015893811.1 (PREDICTED: ribonucleoside-diphosphate reductase small chain [Ziziphus jujuba])

HSP 1 Score: 479.9 bits (1234), Expect = 9.700e-132
Identity = 232/329 (70.52%), Postives = 269/329 (81.76%), Query Frame = 0
Query:  192 EPICRNDPSRFVLFPMKHPDLWEMYKRHEASFWTAEEVDLSQDMGDWQRLTPSEKHFVSMVLAFFASSDGIVMENLAHRFCREVQVTEARCFYGFQITMESIHQETYALLLDTYIKDPEEKAKLFNAYAEIPCIKKKASWAMRWIGSQASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSKLERTQLSRERVLEIIKEAVEVEQGFVCEALPCSLIGMNKDMMSTYILYVADRLLVALGYEKHYNVQNPFEWMELISLQGKTNFFEKRVGEYQKAGVMSKYNKSGGAGGVAPRTFSTDADF 521
            EP+   +P RF +FP+++P +WEMYK+ EASFWTAEEVDLSQD+  W+ LTP EKHF+S VLAFFA+SDGIV+ENLA RF +EVQV EAR FYGFQI +E+IH E Y+LLL+TYIKDP EK +LF+A   +PC+ KKA WA+RWI    SFAERLVAFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+ L R +LS ERV  I+++AV++E+ FVC+ALPC+L+GMN D+MS YI +VADRLL ALGY K YNVQNPF+WMELISLQGKTNFFEKRVGEYQKA VMS  N  GG        F  D DF
Sbjct:   81 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDVRHWENLTPDEKHFISHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDPVEKNRLFHAIETVPCVAKKAEWALRWIDGTESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYT-LMRKKLSEERVKGIVRDAVDIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLGALGYGKIYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSINGDGGT-----HVFKMDEDF 403          
BLAST of NO06G04100 vs. NCBI_GenBank
Match: XP_007215664.1 (ribonucleoside-diphosphate reductase small chain [Prunus persica] >ONI19944.1 hypothetical protein PRUPE_3G306600 [Prunus persica])

HSP 1 Score: 477.2 bits (1227), Expect = 6.300e-131
Identity = 231/329 (70.21%), Postives = 269/329 (81.76%), Query Frame = 0
Query:  192 EPICRNDPSRFVLFPMKHPDLWEMYKRHEASFWTAEEVDLSQDMGDWQRLTPSEKHFVSMVLAFFASSDGIVMENLAHRFCREVQVTEARCFYGFQITMESIHQETYALLLDTYIKDPEEKAKLFNAYAEIPCIKKKASWAMRWIGSQASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSKLERTQLSRERVLEIIKEAVEVEQGFVCEALPCSLIGMNKDMMSTYILYVADRLLVALGYEKHYNVQNPFEWMELISLQGKTNFFEKRVGEYQKAGVMSKYNKSGGAGGVAPRTFSTDADF 521
            EP+   +P RF +FP+++P++WEMYK+ EASFWTAEEVDL QD+  W+ LTP EKHF++ VLAFFA+SDGIV+ENLA RF +EVQV+EAR FYGFQI +E+IH E Y+LLL+TYIKD +EK +LF+A   IPC+ KKA WA+RWI    SFAER+VAFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS L R +LS +RV  II+ AVE+E+ FVCEALPC+L+GMN D+MS YI +VADRLL  LGY K YNVQNPF+WMELISLQGKTNFFEKRVGEYQKA VM+  N     G V    F  DADF
Sbjct:    7 EPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLCQDLRHWETLTPGEKHFITHVLAFFAASDGIVLENLAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIDTIPCVTKKAQWALRWIDGSESFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL-RKKLSEDRVKSIIRNAVEIEREFVCEALPCALVGMNGDLMSQYIEFVADRLLGELGYSKIYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMNSIN-----GNVDSHIFKMDADF 329          
BLAST of NO06G04100 vs. NCBI_GenBank
Match: XP_021823019.1 (ribonucleoside-diphosphate reductase small chain [Prunus avium] >XP_021803600.1 ribonucleoside-diphosphate reductase small chain [Prunus avium])

HSP 1 Score: 477.2 bits (1227), Expect = 6.300e-131
Identity = 231/329 (70.21%), Postives = 268/329 (81.46%), Query Frame = 0
Query:  192 EPICRNDPSRFVLFPMKHPDLWEMYKRHEASFWTAEEVDLSQDMGDWQRLTPSEKHFVSMVLAFFASSDGIVMENLAHRFCREVQVTEARCFYGFQITMESIHQETYALLLDTYIKDPEEKAKLFNAYAEIPCIKKKASWAMRWIGSQASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSKLERTQLSRERVLEIIKEAVEVEQGFVCEALPCSLIGMNKDMMSTYILYVADRLLVALGYEKHYNVQNPFEWMELISLQGKTNFFEKRVGEYQKAGVMSKYNKSGGAGGVAPRTFSTDADF 521
            EP+   +P RF +FP+++P++WEMYK+ EASFWTAEEVDL QD+  W+ L P EKHF++ VLAFFA+SDGIV+ENLA RF +EVQV+EAR FYGFQI +E+IH E Y+LLL+TYIKD +EK +LF+A   IPC+ KKA WA+RWI    SFAER+VAFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS L R +LS +RV  II+ AVE+E+ FVCEALPC+L+GMN D+MS YI +VADRLL  LGY K YNVQNPFEWMELISLQGKTNFFEKRVGEYQKA VM+  N     G V    F  DADF
Sbjct:    7 EPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLCQDLRHWELLAPGEKHFITHVLAFFAASDGIVLENLAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIDTIPCVTKKAQWALRWIDGSESFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL-RKKLSEDRVKSIIRNAVEIEREFVCEALPCALVGMNGDLMSQYIEFVADRLLAELGYGKMYNVQNPFEWMELISLQGKTNFFEKRVGEYQKASVMNSIN-----GNVDSHVFKMDADF 329          
BLAST of NO06G04100 vs. NCBI_GenBank
Match: XP_008231112.1 (PREDICTED: ribonucleoside-diphosphate reductase small chain [Prunus mume])

HSP 1 Score: 476.9 bits (1226), Expect = 8.200e-131
Identity = 231/329 (70.21%), Postives = 269/329 (81.76%), Query Frame = 0
Query:  192 EPICRNDPSRFVLFPMKHPDLWEMYKRHEASFWTAEEVDLSQDMGDWQRLTPSEKHFVSMVLAFFASSDGIVMENLAHRFCREVQVTEARCFYGFQITMESIHQETYALLLDTYIKDPEEKAKLFNAYAEIPCIKKKASWAMRWIGSQASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSKLERTQLSRERVLEIIKEAVEVEQGFVCEALPCSLIGMNKDMMSTYILYVADRLLVALGYEKHYNVQNPFEWMELISLQGKTNFFEKRVGEYQKAGVMSKYNKSGGAGGVAPRTFSTDADF 521
            EP+   +P RF +FP+++P++WEMYK+ EASFWTAEEVDL QD+  W+ LTP EKHF++ VLAFFA+SDGIV+ENLA RF +EVQV+EAR FYGFQI +E+IH E Y+LLL+TYIKD +EK +LF+A   IPC+ KKA WA+RWI    SFAER+VAFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS L R +LS +RV  II+ AVE+E+ FVCEALPC+L+GMN D+MS YI +VADRLL  LGY K YNVQNPF+WMELISLQGKTNFFEKRVGEYQKA VM+  N     G V    F  DADF
Sbjct:    7 EPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLCQDLRHWETLTPGEKHFITHVLAFFAASDGIVLENLAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIDTIPCVTKKAQWALRWIDGSESFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL-RKKLSEDRVKSIIRNAVEIEREFVCEALPCALVGMNGDLMSQYIEFVADRLLGELGYGKIYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMNSIN-----GNVDSHVFKMDADF 329          
BLAST of NO06G04100 vs. NCBI_GenBank
Match: XP_018860165.1 (PREDICTED: ribonucleoside-diphosphate reductase small chain [Juglans regia])

HSP 1 Score: 474.9 bits (1221), Expect = 3.100e-130
Identity = 229/329 (69.60%), Postives = 270/329 (82.07%), Query Frame = 0
Query:  192 EPICRNDPSRFVLFPMKHPDLWEMYKRHEASFWTAEEVDLSQDMGDWQRLTPSEKHFVSMVLAFFASSDGIVMENLAHRFCREVQVTEARCFYGFQITMESIHQETYALLLDTYIKDPEEKAKLFNAYAEIPCIKKKASWAMRWIGSQASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSKLERTQLSRERVLEIIKEAVEVEQGFVCEALPCSLIGMNKDMMSTYILYVADRLLVALGYEKHYNVQNPFEWMELISLQGKTNFFEKRVGEYQKAGVMSKYNKSGGAGGVAPRTFSTDADF 521
            EP+   +P RF +FP+++P++WEMYK+ EASFWTAEEVDLSQD+  W+ LTP EKHF+S VLAFFA+SDGIV+ENLA RF +EVQV EAR FYGFQI +E+IH E Y+LLL+TYIKD +EK +LF+A   +PC+ KKA WA+RWI    SFAERL+AFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+ L R +LS +RV  I+++AVE+E+ FVC+ALPC+L+GMN D+MS YI +VADRLL A G  K YNVQNPF+WMELISLQGKTNFFEKRVGEYQKA VMS  N +GG   V    F  D DF
Sbjct:    7 EPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDLRQWEALTPDEKHFISHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKHRLFHAIETVPCVAKKAQWALRWIDGSESFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLL-RKKLSEQRVKGIVRDAVEIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLGAFGCGKIYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGGTHV----FKLDEDF 330          
BLAST of NO06G04100 vs. NCBI_GenBank
Match: XP_010249023.1 (PREDICTED: ribonucleoside-diphosphate reductase small chain-like [Nelumbo nucifera])

HSP 1 Score: 474.6 bits (1220), Expect = 4.100e-130
Identity = 229/329 (69.60%), Postives = 271/329 (82.37%), Query Frame = 0
Query:  192 EPICRNDPSRFVLFPMKHPDLWEMYKRHEASFWTAEEVDLSQDMGDWQRLTPSEKHFVSMVLAFFASSDGIVMENLAHRFCREVQVTEARCFYGFQITMESIHQETYALLLDTYIKDPEEKAKLFNAYAEIPCIKKKASWAMRWIGSQASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSKLERTQLSRERVLEIIKEAVEVEQGFVCEALPCSLIGMNKDMMSTYILYVADRLLVALGYEKHYNVQNPFEWMELISLQGKTNFFEKRVGEYQKAGVMSKYNKSGGAGGVAPRTFSTDADF 521
            EP+   +P RF +FP+++P++WEMYK+ EASFWTAEEVDLSQD+ DW+ LT  EKHF+++VLAFFA+SDGIV+ENLA RF +EVQ +EAR FYGFQI +E+IH E Y+LLL++YIKD  EK +LF+A   IPC++KKA W +RWI S  SFAERLVAFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY  L++ +LS ERV  I+ EAVE+E+ FVC+ALPC+L+GMN D+MS YI +VADRLL ALGY K YNVQNPF+WMELISLQGKTNFFEKRVG+YQKA VMS  N  GG+       F  D DF
Sbjct:    7 EPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDLRDWENLTHGEKHFITLVLAFFAASDGIVIENLASRFMKEVQNSEARAFYGFQIAIENIHSEMYSLLLESYIKDAAEKNRLFHAIETIPCVEKKAQWTLRWITSSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYEFLKQ-KLSEERVKGIVAEAVEIEREFVCDALPCALVGMNADLMSQYIEFVADRLLGALGYGKIYNVQNPFDWMELISLQGKTNFFEKRVGDYQKASVMSSLNGEGGS-----HAFKLDEDF 329          
BLAST of NO06G04100 vs. NCBI_GenBank
Match: XP_022895054.1 (ribonucleoside-diphosphate reductase small chain [Olea europaea var. sylvestris])

HSP 1 Score: 473.8 bits (1218), Expect = 6.900e-130
Identity = 228/329 (69.30%), Postives = 270/329 (82.07%), Query Frame = 0
Query:  192 EPICRNDPSRFVLFPMKHPDLWEMYKRHEASFWTAEEVDLSQDMGDWQRLTPSEKHFVSMVLAFFASSDGIVMENLAHRFCREVQVTEARCFYGFQITMESIHQETYALLLDTYIKDPEEKAKLFNAYAEIPCIKKKASWAMRWIGSQASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSKLERTQLSRERVLEIIKEAVEVEQGFVCEALPCSLIGMNKDMMSTYILYVADRLLVALGYEKHYNVQNPFEWMELISLQGKTNFFEKRVGEYQKAGVMSKYNKSGGAGGVAPRTFSTDADF 521
            EPI  ++P RF +FP+++P++WEMYK+ EASFWTAEEVDLSQD   W++LT  EKHF+  VLAFFA+SDGIV+ENLA RF +EVQ++EAR FYGFQI +E+IH E Y+LLL++YIKD EEK +LF+A   IPC++KKA WA+RWI    SFAER++AFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS L R +LS +RV  +I +AVE+E+ FVC+ALPC+L+GMN D+MS YI +VADRLL ALGY K YNVQNPF+WMELISLQGKTNFFEKRVGEYQKA VMS  N +G         F  D DF
Sbjct:    7 EPILASNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDTQHWEKLTEDEKHFIKHVLAFFAASDGIVLENLAGRFMKEVQISEARAFYGFQIAIENIHSEMYSLLLESYIKDSEEKNRLFHAIETIPCVEKKAKWALRWIDGSESFAERILAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL-RMKLSEDRVKGLIADAVEIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLNALGYSKLYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGDT-----HVFKIDEDF 329          
BLAST of NO06G04100 vs. NCBI_GenBank
Match: PON95383.1 (Ribonucleotide reductase small subunit [Trema orientalis])

HSP 1 Score: 473.8 bits (1218), Expect = 6.900e-130
Identity = 226/329 (68.69%), Postives = 269/329 (81.76%), Query Frame = 0
Query:  192 EPICRNDPSRFVLFPMKHPDLWEMYKRHEASFWTAEEVDLSQDMGDWQRLTPSEKHFVSMVLAFFASSDGIVMENLAHRFCREVQVTEARCFYGFQITMESIHQETYALLLDTYIKDPEEKAKLFNAYAEIPCIKKKASWAMRWIGSQASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSKLERTQLSRERVLEIIKEAVEVEQGFVCEALPCSLIGMNKDMMSTYILYVADRLLVALGYEKHYNVQNPFEWMELISLQGKTNFFEKRVGEYQKAGVMSKYNKSGGAGGVAPRTFSTDADF 521
            EP+   +P RF +FP+++P++WEMYK+ EASFWTAEEVDLSQD+  W+ +TP EKHF+S VLAFFA+SDGIV+ENLA RF +EVQV EAR FYGFQI +E+IH E Y+LLL+TYIKD  EK +LF+A   +PC+ +KA WA+RWI    SFAERL+AFA VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+ L + +LS ERV  I+++AV++E+ FVC+ALPC+L+GMN D+MS YI +VADRLL ALGY K YN QNPF+WMELISLQGKTNFFEKRVGEYQKA VMS  N +GG        F  D DF
Sbjct:    7 EPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESMTPDEKHFISHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSAEKDRLFHAIETVPCVARKAQWALRWIDGSESFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYT-LMKKKLSEERVRGIVRDAVDIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLGALGYGKMYNAQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSINGNGG-----NHVFKLDEDF 329          
The following BLAST results are available for this feature:
BLAST of NO06G04100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ27053.11.500e-14074.32Ribonucleoside-diphosphate reductase small chain [... [more]
XP_005705903.17.400e-13270.86ribonucleotide reductase small subunit [Galdieria ... [more]
XP_015893811.19.700e-13270.52PREDICTED: ribonucleoside-diphosphate reductase sm... [more]
XP_007215664.16.300e-13170.21ribonucleoside-diphosphate reductase small chain [... [more]
XP_021823019.16.300e-13170.21ribonucleoside-diphosphate reductase small chain [... [more]
XP_008231112.18.200e-13170.21PREDICTED: ribonucleoside-diphosphate reductase sm... [more]
XP_018860165.13.100e-13069.60PREDICTED: ribonucleoside-diphosphate reductase sm... [more]
XP_010249023.14.100e-13069.60PREDICTED: ribonucleoside-diphosphate reductase sm... [more]
XP_022895054.16.900e-13069.30ribonucleoside-diphosphate reductase small chain [... [more]
PON95383.16.900e-13068.69Ribonucleotide reductase small subunit [Trema orie... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G04100.1NO06G04100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597904gene_6742Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100410g1gene4121Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G04100.1NO06G04100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G04100 ID=NO06G04100|Name=NO06G04100|organism=Nannochloropsis oceanica|type=gene|length=3433bp
TTCTTTTTGTGGAAAATCCCTGGGACACAAGCGTAACATAAATACAAACA
CCTTACACCCTTCCGTGTATTGTTGACTTTCAAATACAAGCATACGTGAA
TATCGGCAGGTAGTCTCTGCGACAGTCCATCAAGTCTAAGACGTGAGAGC
CGTCCGTCCACTAAAGCGAGCGCGCGGGCTGAAGCAAGCGCACGATGATA
AGGAAGAATTTCACCCACTACGGGTTGGCGTGGTCGGCTATGCCACATTG
TCCGACTGTATATCGTTCTCAAGAGCGGTAAAATTCCAGGCCTAGCGCCG
TGCTGTAGTGTGCGGTTAATGGCCAGCGCGTTTCGTTCACACGTTCGCTC
AAGCCGCGAAGTCAAGTGGAAGAAGAAGGTCATGACCAAACAAGCAGACT
CGGACTAGACCTGTCGCGTAGCCGCCCAATATGCCGTATCAATTCTTCTC
GAACTGCTTCACCCATTCTATCCCCCTCTATTCCACGCACCCAAACCACA
GCCAGACATAGCAACTATGAGTCGCGACGACCACCAAGAGCAGCAACAGC
AGCCGCCGCAGCACCATGAAGAGCACCAGCAGCAGCAAAGGAGATGGAGG
CGCCGCCCAGCCCGGTCCAGCGTCATCTTTACCACCGCGGCTACTGTTGC
ACTCTCGTGCCTCTGCAGTCCGTCCACCTCCTCCTCGCCCTTTCTTTTCG
CCTGTGCTACCGCGGCACCCAACAAGCCATCAAATCAGCAGCAGCACTCA
TTACCACCACTGTCACCATTTTCTTTTCGCCTACACAAGCTGAAGGGCGG
CGCCAGTGAAGGGGAGGGTACAAGGAAGAATGAGGTAGGGAAGGAGGGCT
CAGGTTTTGCCACACCACTGGTGCGAGGCGGGATGACACGACTGACGAAA
GAAGGGAGAAAGGATGGCATGGGGATGGAAGAAGCGGAAGACCGGTTAGG
GGGAGGAGGAGGAGAGGGAGGGGGACGAGCAGAAGCAGCAGTGAAGCAAT
CACCAGCCCCACAACCAGCAGCAGCAGCTGCAGCATCCGGAACGGTGATG
GGGAAAGAGGAAGCGAGGAAGGTGGAGGGGGAATGGGTTGAGCCAATCTG
TCGAAACGATCCCTCCCGATTCGTGTTGTTCCCGATGAAGCACCCGGACC
TATGGGAGATGTACAAGAGGCACGAGGCCAGTTTTTGGACGGCGGAGGAG
GTGGATTTGAGCCAGGACATGGGTGACTGGCAGgtaaggagagagggagg
gaaggagggagggaaggaagaagggagggagggagggaaggagggaagga
gagagggagggcagggtctccaggcactcaagagacgaagaaaaactccg
ctcacgctcagcgccgaacggaattcctcttctccccctccctccgtccg
tcccgttccgtgcagAGATTGACCCCGTCGGAGAAGCATTTTGTGAGCAT
GGTACTTGCCTTCTTCGCCTCCTCGGACGGCATTGTAATGGAGAATCTGG
CCCACCGCTTCTGTCGGGAAGTGCAGgtgaagaagggagggagggaggga
gggagggagggagggagggagggagggattggacgttaaaacacgggcgt
tctagaaggcgactgcgggtgcctgtcgacggcgtcttccatcataacat
ttccctctctttttttcacctcaacccccttccttcctccctccctcttt
tcccagGTGACGGAGGCCCGGTGTTTTTACGGCTTTCAGATCACGATGGA
GAGCATCCACCAGGAGACATACGCCCTCCTCCTCGACACGTACATCAAGg
tgcgaccaccttgccctccctccctccctccctccttccttccctccctt
ggtgtctagatggatagatggatggcagcacattcacgtttcgacctacc
tccattcctttccctgtccttccctccctccctccctccttcccccctcc
ctaatgccctccctccctccctccctccctccctccctccctccctccct
cccttatgccctccctccttccctccctccccagGACCCCGAGGAGAAAG
CGAAGCTTTTCAACGCCTATGCTGAGATTCCCTGCATCAAGAAGAAAGCC
TCATGGGCCATGCGCTGGATCGGGAGCCAGGCCTCGTTTGCCGAGCGACT
Ggtagggagggagggagggagggagggagggagggagggagcgagggagc
gagggagggcgtggagggcggatttcttttcgtgatttaaccactccatg
tgtgcttcgtcgacggctgatcgatctccctccctccctctttcccttct
ttcctccctccctccctccctcacctatcagGTGGCCTTCGCAGCTGTGG
AGGGAATCTTTTTCTCGGGCTCCTTTTGCGCCATTTTCTGGCTGAAGAAG
CGAGGGCTCATGCCGgttagtagtgggtcctcgggagggaaggaggcagg
gaaggagggagggagggagagaaggagaatcgcttccaactcatgtcgcc
cgacgatgacgccccctacggcagGGACTGACTTTCTCGAACGAGCTCAT
CTCCCGCGATGAGGGCTTGCACTGCGACTTTGCTTGCCTCCTCTACTCCA
AACTAGAACGGACACAGCTGgtaggcactcgaccccttcctccctccctc
cctccttcctcccctccctccctgttcatcatcctccttctttccgcact
tgttgcgcctctcaaccaagccatccctccctccctccctccctccctcc
ctccctttccacgccaaatcaatcagAGTCGGGAGCGTGTGTTGGAGATC
ATTAAGGAGGCGGTGGAGGTGGAGCAAGGCTTTGTCTGCGAGGCCTTACC
CTGCTCCTTGATCGGGATGAACAAAGACATGATGTCCACCTACATCCTTT
ATGTCGCCGACCGCCTCTTGgtaaggagggagggggggaggaagtgaggg
aaggagaggccctagtctcgtatgtgctgatcgttctcttccttgctatg
ttccttcttcgcgcattttttttttttttcagGTGGCTCTAGGGTACGAG
AAACACTACAATGTCCAGAACCCCTTTGAGTGGATGGAGCTCATTTCGCT
GCAGgtgcgttctaccctccctccctcccccccctccctccctccttctg
ccaccacggacaagcccaacttcgccgagcgaggtgtcggagatattcaa
agtgcctgttatcatgaaacatcctaaaaaggcctccctccctccctccc
tcccacgtccatctcagGGCAAGACCAATTTTTTCGAAAAGCGCGTGGGG
GAGTACCAGAAAGCGGGCGTCATGTCTAAATATAACAAGAGCGGAGGGGC
AGGAGGCGTCGCCCCCAGGACATTCAGCACTGACGCGGATTTTTAAGGGA
GGGAAGGAGGGCGGGAGGGAGGGAAGAGGGGAG
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protein sequence of NO06G04100.1

>NO06G04100.1-protein ID=NO06G04100.1-protein|Name=NO06G04100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=521bp
MSRDDHQEQQQQPPQHHEEHQQQQRRWRRRPARSSVIFTTAATVALSCLC
SPSTSSSPFLFACATAAPNKPSNQQQHSLPPLSPFSFRLHKLKGGASEGE
GTRKNEVGKEGSGFATPLVRGGMTRLTKEGRKDGMGMEEAEDRLGGGGGE
GGGRAEAAVKQSPAPQPAAAAAASGTVMGKEEARKVEGEWVEPICRNDPS
RFVLFPMKHPDLWEMYKRHEASFWTAEEVDLSQDMGDWQRLTPSEKHFVS
MVLAFFASSDGIVMENLAHRFCREVQVTEARCFYGFQITMESIHQETYAL
LLDTYIKDPEEKAKLFNAYAEIPCIKKKASWAMRWIGSQASFAERLVAFA
AVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSK
LERTQLSRERVLEIIKEAVEVEQGFVCEALPCSLIGMNKDMMSTYILYVA
DRLLVALGYEKHYNVQNPFEWMELISLQGKTNFFEKRVGEYQKAGVMSKY
NKSGGAGGVAPRTFSTDADF*
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Synonyms
Publications