NO06G03820, NO06G03820 (gene) Nannochloropsis oceanica

Overview
NameNO06G03820
Unique NameNO06G03820
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2396
Alignment locationchr6:1060854..1063249 -

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Properties
Property NameValue
DescriptionAtp-dependent rna helicase ddx55
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1060854..1063249 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0016787hydrolase activity
GO:0003723RNA binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014014RNA_helicase_DEAD_Q_motif
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
IPR025313DUF4217
IPR014001Helicase_ATP-bd
Homology
BLAST of NO06G03820 vs. NCBI_GenBank
Match: EWM26360.1 (atp-dependent rna helicase ddx55 [Nannochloropsis gaditana])

HSP 1 Score: 865.5 bits (2235), Expect = 1.200e-247
Identity = 451/611 (73.81%), Postives = 493/611 (80.69%), Query Frame = 0
Query:   19 HPLSFQALKPALHANMLAAIGALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMILRRERQLKKHEVGAIIISPTRELAKQIFKVATHFCSHAGLRTPLLLIGGTDVVGDNFNRFSQDGADILVATPGRLHDVLERYAHLFDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQRTKEVQATPQTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASILTQHPMFKKALG-----GGGREGESG---GSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWSTDTRGIEYKDKKREAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQILEEWEELGREERLFKRLRNHKISREEYEK 622
            H L+FQA+ P+LH   LAA+ AL FTQMTPVQAST+PLFLTNKDVCVEAVTGSGKTLAF++PAVEMILRR+  LKKHEVGAIIISPTRELAKQI KV THFCSH GLR PLLL+GGTD+VGDNF RFSQDGADILV TPGRLHDVLERY H   +RELEVLILDEADTLLNMGFKATLTAIL HLPKQRRTGLFSATQTREVR+LARAG+RNPATVAVQVVNQ+T+EVQATPQTL NF+WTC +PEEKLGRLLAFL++H++ KVMVFFITCAAVDYFA ILTQHP F++ LG     G G++ + G   GS VA LHGKMVQKKRDGML RFT AA  GG VLLCTDVAARGLDVPDVDWI+QYEPPQDPSFFIHRVGRTARAGR+G+SLTFLLEAE PYVEFLRLK VPLA LEE+EV LP  DP G  V+EGVK LA++DREVLE+GT+A+TAFVRAYKEHQCQFIFRF QLDL  LARAY LLRLPKMPEL+HHPI V F++W+TDTR IEY+DKKREAAR                                                       QQI+EEWEELGREERLFKRLR  KISREEYEK
Sbjct:   13 HRLAFQAMIPSLHERTLAAVAALNFTQMTPVQASTIPLFLTNKDVCVEAVTGSGKTLAFVIPAVEMILRRKSPLKKHEVGAIIISPTRELAKQILKVTTHFCSHTGLRPPLLLVGGTDIVGDNFKRFSQDGADILVGTPGRLHDVLERYGHAIGVRELEVLILDEADTLLNMGFKATLTAILDHLPKQRRTGLFSATQTREVRQLARAGMRNPATVAVQVVNQQTREVQATPQTLLNFHWTCARPEEKLGRLLAFLSRHREKKVMVFFITCAAVDYFARILTQHPAFRRVLGTDQGEGNGKKRKVGGLQGSRVAVLHGKMVQKKRDGMLARFTQAASEGGGVLLCTDVAARGLDVPDVDWIVQYEPPQDPSFFIHRVGRTARAGRVGRSLTFLLEAEEPYVEFLRLKGVPLAALEEDEVRLPNEDPAGTGVVEGVKALALRDREVLERGTRAFTAFVRAYKEHQCQFIFRFAQLDLGALARAYGLLRLPKMPELSHHPIAVDFQEWATDTRSIEYQDKKREAAR-KMRLAEAARERDRVKEQAAGRKVVRGRTGKGEEEGRVVEPGQEKRQRKKRKGKHQQIVEEWEELGREERLFKRLRQRKISREEYEK 622          
BLAST of NO06G03820 vs. NCBI_GenBank
Match: XP_002290486.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED92238.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 479.2 bits (1232), Expect = 2.300e-131
Identity = 279/609 (45.81%), Postives = 380/609 (62.40%), Query Frame = 0
Query:   23 FQALKPALHANMLAAI--GALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMILRRERQLKKHEVGAIIISPTRELAKQIFKVATHFCSHAGLRTPLLLIGGTDV--VGDNFNRFSQDGADILVATPGRLHDVLERYAHLFDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVREL-ARAGLRNPATVAVQV---VNQRTKEVQATPQTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASILTQHPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWSTD--TRGIEYKDKKREAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQILEEWEELGREERLFKRLRNHKISREEYEK 622
            F ++ P L  ++L  +      F   TPVQ++T+PLFLT+ DV V AVTGSGKTLAF++P VEMILRR   LK H+VGA+++ PTRELA+Q F V    C   G+  PLLL+GG  V  V  +  +F +  +DI++ TPGR+ DVL R+ ++ D+ ELEVLILDE+D LL+MGF+ TLT+IL  LP+ RRTGLFSAT T  V++L  ++G+RNP  V V V   V  +    QATP +L+N+Y      +EKL RLL+FLT+H  +KV+VFF+TCA V+Y++S+L +  +  K            G    ALHGK+VQK+R+  + RF       G+ LLCTDVAARGLD+ DV W IQ++ P DPS ++HRVGR+ARAGR+GKSL FL   E  YV+FLRL+ VP+ +LE++EV+   S+     VL  ++ L +KDR+VLE+GTKAYT+++RAYKEH C FIFRF  LDL  LA +++LLRLPKMPEL     K+ F+    +     I + DK REAAR                                                        +I +EW+EL +EERL+K+LR +KI++EEY++
Sbjct:    1 FTSINPPLSPSILTFLTKPPYNFPTPTPVQSTTIPLFLTHHDVFVRAVTGSGKTLAFLIPVVEMILRRTVLLKGHQVGALVLEPTRELARQTFSVCRDLCGECGMNEPLLLVGGASVSAVAHDLQQFQKLKSDIVIGTPGRVEDVLTRFDNI-DVSELEVLILDESDVLLDMGFEVTLTSILSRLPRMRRTGLFSATNTSGVKKLCVKSGMRNPVVVDVAVSAIVKSKGNSQQATPSSLTNYY-IISPLDEKLSRLLSFLTQHSNEKVIVFFLTCACVEYYSSVLKELKLPCK------------GYEYEALHGKLVQKRREKAMERFREKT--EGSALLCTDVAARGLDISDVSWTIQFDAPVDPSSYVHRVGRSARAGRVGKSLVFLTRKEEAYVDFLRLRKVPVRELEDDEVS--GSNVFVPDVLPSIRKLVLKDRDVLEKGTKAYTSYIRAYKEHHCGFIFRFASLDLGVLATSFSLLRLPKMPELRDKLGKLNFQAAGPEINIHAIPFLDKTREAAR---QKRLAAELAAGGKNAKQIKAEERAAERIRKQKERRQAEIAKGRNPNKKRGRQARIFDEWDELAKEERLYKKLRTNKITKEEYDR 588          
BLAST of NO06G03820 vs. NCBI_GenBank
Match: XP_009515846.1 (hypothetical protein PHYSODRAFT_309392 [Phytophthora sojae] >EGZ28571.1 hypothetical protein PHYSODRAFT_309392 [Phytophthora sojae])

HSP 1 Score: 462.6 bits (1189), Expect = 2.200e-126
Identity = 333/614 (54.23%), Postives = 425/614 (69.22%), Query Frame = 0
Query:   21 LSFQALKPALHANMLAAIGALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMI--------LRRERQLKKHEVGAIIISPTRELAKQIFKVATHFCSHAGLRTPLLL-IGGTDVVGD-NFNRFSQDGADILVATPGRLHDVLER-YAHLFDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQRTKEVQATPQTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASILTQHPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWSTDTRGIEYKDKKREAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQILEEWEELGREERLFKRLRNHKISREEYEKEL 624
            + F   +PAL   +LA   ALGF  MTPVQA+T+PLFL+NKDVCV+A TGSGKTLAF++P V+++        +   R     ++ A++ISPTRELA+QIF+ A  F +HA     LLL +GGT V  D +  R +     +++ TPGR  D+L R      + RE E+LILDEADTLL+MGF+ +L  IL HLPKQRRTGLFSATQT+EV+ LARAGLRNPAT++VQV N      Q TP TL N+Y      +++L  L  F+   K +K++VFF TC +VD+FA +L +  +FK     G ++       V ALHGKM QKKR      F++   G   +L+CTDV ARG+D+PDVDWI+QY+PPQDP+FF+HRVGRTARAGR G +L+FL   E  YV FL+++ VP      EE+ LP    E   VL  VK   ++DR++LE+GTKA+ AFVR+YKEHQCQFIFRF +LDL  +AR + LL+LPK+ EL +  +++ FEK    T  I++KDK RE       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QQI+EEW+EL  EE+L+K+L+  KI+ EEYE  L
Sbjct:    1 MRFHDFQPALCPEILAETDALGFEHMTPVQAATLPLFLSNKDVCVDACTGSGKTLAFVLPIVQLLKTKLADGSITAPRHADVTKLVAMVISPTRELARQIFECAEKFVAHALPSVQLLLFVGGTSVDEDLSLIRGAVGKCSVVIGTPGRTEDLLNRCVGSSVETREFEMLILDEADTLLDMGFEVSLNKILEHLPKQRRTGLFSATQTQEVKALARAGLRNPATISVQVAN----NTQVTPSTLQNYYCLVGH-DQRLSALHNFVHSKKGEKLIVFFSTCGSVDFFARVLEE--LFK-----GTKD-----MPVVALHGKMPQKKRTTNYDLFSSLKSG---LLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVGRTARAGRSGCALSFLSSNEDAYVNFLKIRKVPC-----EEMTLPLDTMED--VLPKVKSFILEDRDLLEKGTKAFMAFVRSYKEHQCQFIFRFKELDLGAVARGFCLLQLPKINELRN--VRINFEKTDIKTTDIKFKDKARE-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQQIVEEWDELAEEEQLYKKLKKGKITEEEYEMAL 578          
BLAST of NO06G03820 vs. NCBI_GenBank
Match: EJK55144.1 (hypothetical protein THAOC_25148 [Thalassiosira oceanica])

HSP 1 Score: 461.5 bits (1186), Expect = 5.000e-126
Identity = 276/658 (41.95%), Postives = 388/658 (58.97%), Query Frame = 0
Query:   22 SFQALKPALHANMLAAIG--ALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMILRRERQLKKHEVGAIIISPTRELAKQIFKVATHFCSHAGLRTPLLLIGGTDVVGDNFNRFSQDGA-------DILVATPGRLHDVLERYAHLFDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVREL-ARAGLRNPATVAVQVVNQRTK-------EVQATPQTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASILTQ-HPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPES-DPEGAL-----------------------------------VLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWSTD--TRGIEYKDKKREAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQILEEWEELGREERLFKRLRNHKISREEYEKEL 624
            SF +++P L   +L  +      F   TPVQ +T+PLFLT+ DV V AVTGSGKTLAF++P VEMILRR   LK +++GA+I+ PTRELA+Q F V    C   G+  PLLL+GG    G + +  S D A       DI+V TPGR+ DVL RY ++ D+ E+EVLILDE+D LL+MGF+ TLT+IL  LP+ RRTGLFSAT T  V+ L  ++G+RNP  V V + +++ +       + QATP +L+N Y+     +EKL RLLAFL +H ++KV++FF+TCA V+Y++++L +  P  K             G    +LHGK+VQK+R+  +GRF  ++   G+ LLCTDVAARGLD+PD+DW IQ++ P DPS ++HRVGR+ARAGR G SL FL   E  Y++FL+L+ VP+ ++ + EV  P S + +GA                                    VL  ++ L   DR+VLE+GTKAYT+++RAYKEH C FIFRF  LDL  LA +++LLRLPKMPEL     K+ F     +     I++KDK+RE+AR                                                       Q+I +EW+EL +EERL+K+LR++KI++ EY++++
Sbjct:   16 SFASIQPPLSPAILEFLSKPPYNFPSPTPVQDTTIPLFLTHHDVFVRAVTGSGKTLAFLIPVVEMILRRTVMLKSNQIGALILEPTRELARQTFGVCRDLCQSCGINEPLLLVGGGGSKGASVSAVSYDLAQFAKLQSDIIVGTPGRVEDVLTRYDNI-DVSEMEVLILDESDVLLDMGFEVTLTSILSRLPRMRRTGLFSATNTSGVKRLCVKSGMRNPVVVDVAINSEQNEHEMQAKDQKQATPSSLTN-YFLVSPLDEKLSRLLAFLNQHAEEKVIIFFLTCACVEYYSTVLQKLRPPAK-------------GYAFESLHGKLVQKRREKAMGRFRESS--NGSALLCTDVAARGLDLPDIDWTIQFDAPVDPSSYVHRVGRSARAGRSGNSLVFLTRKEEAYIDFLKLRKVPVREMPDTEVCKPPSAEDDGATSTKIVETTTKRKHASKPADERQIMSAAGSDLRVKDVLPDIRKLVCDDRDVLEKGTKAYTSYIRAYKEHHCGFIFRFASLDLGVLATSFSLLRLPKMPELRDKLGKLNFTPAGPEINIHAIQFKDKQRESAR---QKRLKAELAAGGKNAKQIKAEQRAAERIQKQKERRSNEIAKGRNPNKKRGKQQRIFDEWDELAKEERLYKKLRSNKITKSEYDRQM 653          
BLAST of NO06G03820 vs. NCBI_GenBank
Match: CBJ27307.1 (DEAD box helicase [Ectocarpus siliculosus])

HSP 1 Score: 459.1 bits (1180), Expect = 2.500e-125
Identity = 262/492 (53.25%), Postives = 331/492 (67.28%), Query Frame = 0
Query:   54 VPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMILRRERQLKKHEVGAIIISPTRELAKQIFKVATHFCSHAGLRTPLLLIGGTDVVGDNFNRFSQDGADILVATPGRLHDVLERYAHLFDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQR---------TKEVQATPQTLSNFYWTCKKPEEKLGRLLAFL-TKHKKDKVMVFFITCAAVDYFASILTQHPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWST-DTRGIEYKDKKREAAR 535
            +PLF+ NKDVCVEAVTGSGKTLAF+VPA+EMILRRE  LK+++VGAII++PTRELA QIF V + F        PLLL+GGT  V +    F + GA ILV TPGR+ D+L  Y ++FD RELE L+LDEADTLL+MGF  TL +I   LPKQRRTGLFSATQTRE + LARAGLRNPATV+V V ++           ++ QATP +L NFY  C +PEEKL +L+ FL  + + +K +VF  TCA VD+F+  L+Q P  K             G  V +LHG+MVQK+R          AV  G       VAARG+D+PDV WI+Q++PPQDPS+F+HRVGRTARAG+ G+SLT L  AE  Y+ FL  + VPL ++E        +    + +LE VK +   DR+VLE+GTKA+ +FVR YKEHQC FIFRF  LDL  +ARA+ LLRLPK+ EL++  +  +FEK  T D   I+Y DK RE AR
Sbjct:    1 MPLFMCNKDVCVEAVTGSGKTLAFVVPAIEMILRREVDLKRNQVGAIILTPTRELANQIFGVVSKFSEALDEAKPLLLVGGTS-VEECLAAFRKGGASILVGTPGRVEDMLNNY-NVFDTRELEALVLDEADTLLDMGFAGTLNSIFSLLPKQRRTGLFSATQTRETKALARAGLRNPATVSVAVRSKSGGAGAGGVPGQKTQATPSSLENFYIVC-EPEEKLAQLVGFLKARPEGEKTIVFLSTCAGVDFFSKTLSQLPSVKAL-----------GLRVESLHGRMVQKRR---------TAVKDG------HVAARGIDIPDVAWIVQFDPPQDPSYFVHRVGRTARAGKKGRSLTLLCPAEDAYIPFLANRKVPLREME------AFTSVNASEILEEVKGMVKTDRDVLEKGTKAFISFVRGYKEHQCSFIFRFNDLDLAAVARAFCLLRLPKIAELSNPAVAESFEKEKTVDFTAIKYADKAREKAR 457          
BLAST of NO06G03820 vs. NCBI_GenBank
Match: GAQ90565.1 (DEAD-box ATP-dependent RNA helicase family protein [Klebsormidium nitens])

HSP 1 Score: 459.1 bits (1180), Expect = 2.500e-125
Identity = 264/521 (50.67%), Postives = 344/521 (66.03%), Query Frame = 0
Query:   23 FQALKPALHANMLAAIGALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMILRRERQLKKHEVGAIIISPTRELAKQIFKVATHFCSHA-GLRTPLLLIGGTDVVGDNFNRFSQDGADILVATPGRLHDVLERYAHLFDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQR--TKEVQATPQTLSNFYWTCKKPEEKLGRLLAFL-TKHKKDKVMVFFITCAAVDYFASILTQHPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFE-----KWSTDTRGIEYKDKKREAAR 535
            F  LKPAL    L  + + GF + TPVQAS +PLFL+NKDV VEAVTGSGKTLAF++P VEM+ + E  LK+H+VGA+IISPTRELA+QI+ VA  F     GLR   LL+GGTD VG +  R  ++GA++L+ TPGRL D++ER A   +L+ LEVL+LDEAD LL+MGF+  +TAIL  LPKQRRTGLFSATQT  V ELARAGLRNP  V V+V   R        TP +LS  Y  C + EEK+ +L+ FL T+ +  K +V+F+TCA VDY+ ++L + P  KK               + ALHG+M Q  R+  L  F+A   G   +L CTDVAARGLD+P VDWI+Q++PPQDPS FIHRVGRTAR GR G+++ +LL  E  Y EFLRL+ VPL +L  +   LP        + E ++  A  DR++LE+GT+A  +FVR YKEHQC++IFR+  L L  LA A+ LL+LP+MPEL +   K  F        + D+  + +KD +RE  R
Sbjct:   14 FSDLKPALSEETLQVLNSQGFERTTPVQASAIPLFLSNKDVAVEAVTGSGKTLAFVLPIVEMLRKLEGSLKRHQVGAVIISPTRELAQQIYSVAVPFVETVKGLRAS-LLVGGTD-VGADVRRLKEEGANVLIGTPGRLDDIMER-ASFLELKRLEVLVLDEADRLLDMGFQRQVTAILQRLPKQRRTGLFSATQTEAVEELARAGLRNPVRVEVKVTGSRQGAHGELKTPASLSIKYLVC-EVEEKVPQLVDFLQTQARGHKCIVYFLTCACVDYWGTVLPRLPGLKKL-------------PIVALHGRMKQSVREKALADFSAMPAG---ILFCTDVAARGLDIPGVDWIVQFDPPQDPSSFIHRVGRTARMGREGRAIVYLLPEEDTYAEFLRLRKVPLVEL-PKTAGLPS-------LTESLRTAATADRDILEKGTRAMVSFVRGYKEHQCKYIFRYKDLPLGRLAMAFGLLQLPRMPELQNGRGKYKFSTDGFVPAAVDSDSVRFKDAQREKQR 506          
BLAST of NO06G03820 vs. NCBI_GenBank
Match: XP_009827342.1 (hypothetical protein H257_04500 [Aphanomyces astaci] >ETV83912.1 hypothetical protein H257_04500 [Aphanomyces astaci])

HSP 1 Score: 454.1 bits (1167), Expect = 8.000e-124
Identity = 297/622 (47.75%), Postives = 380/622 (61.09%), Query Frame = 0
Query:   21 LSFQALKPALHANMLAAIGALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMILRR-----------ERQLKKH-EVGAIIISPTRELAKQIFKVATHFCSHAGLRTPLLL-IGGTDVVGDNFN-RFSQDGADILVATPGRLHDVLERYAHL--FDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQRTKEVQATPQTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASI---LTQHPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWSTDTRGIEYKDKKREAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQILEEWEELGREERLFKRLRNHKISREEYEKEL 624
            + F   KP L A +LA I  LGFT MTPVQ++T+PLFLTNKDV V+A TGSGKTL+F++P VEM+ RR               KKH ++ A+++SPTRELA+QI+  A  F S       +LL +GGT V  D    R ++    ++V TPGR+ D+  R A L   D +E EVLILDEADTLL+MGF  ++  ILG LPKQRRTGLFSATQT+EV+ LARAGLRNPATV+VQ+ +  TK    TP TL+N Y+T  + + KL  LL F+     +K +VFF TCA+VD++ ++   LT+H                  +NV  LHGKM  KKR      F  A  G   +L+CTDV ARG+D+PDVDWIIQ++PPQDP+FF+HRVGRTARAGR G +LTFL   E  YV FL ++ VPL +++     +P S  E   VL+ VK L + DR+VLE+GTKA+ +FVR+YKEHQCQFIFRF  L+L  +A  +ALL+LPK+ EL      +AF         I YKDK RE  R                                         XX XXXXXXXX   QQI+EEWEEL +EE LFK+ +  KI++EEY+  L
Sbjct:    1 MKFSECKPPLCAEVLAGIEELGFTDMTPVQSATMPLFLTNKDVAVDASTGSGKTLSFVLPTVEMLRRRLLATQDDDVANVLATKKHSQLMAMLLSPTRELARQIYDQAVFFFSRVLPDVHVLLFVGGTSVDEDMAAIRAAKGYVSVIVGTPGRIEDMFNRIAELAILDTKEFEVLILDEADTLLDMGFDISINNILGKLPKQRRTGLFSATQTQEVKALARAGLRNPATVSVQLAS-NTK----TPSTLTN-YFTPVEYDAKLATLLQFVQNKPSEKHIVFFSTCASVDFYGAVLAHLTKH-----------------SNNVVTLHGKMQPKKRIAHYDEFVHAPAG---LLVCTDVVARGIDLPDVDWIIQFDPPQDPNFFVHRVGRTARAGRSGSALTFLSSNEDAYVNFLNIRKVPLTEMQ-----VPVSTEEAEHVLDQVKALQLTDRDVLEKGTKAFISFVRSYKEHQCQFIFRFRDLNLAKVATGFALLQLPKINELRCLD-NIAFTPSGVKIVDIPYKDKAREKQR--------QKKLVEIAAEHKAEKLDRFEKKQLDKKRKAAVDXXGXXXXXXXXGMHQQIVEEWEELEKEEHLFKKFKRGKITKEEYDAAL 582          
BLAST of NO06G03820 vs. NCBI_GenBank
Match: XP_008872119.1 (hypothetical protein H310_08222 [Aphanomyces invadans] >ETV99563.1 hypothetical protein H310_08222 [Aphanomyces invadans])

HSP 1 Score: 452.2 bits (1162), Expect = 3.000e-123
Identity = 284/619 (45.88%), Postives = 364/619 (58.80%), Query Frame = 0
Query:   21 LSFQALKPALHANMLAAIGALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMILRRERQLKKHEVG------------AIIISPTRELAKQIFKVATHFCSHAGLRTPLLL-IGGTDVVGDNFN-RFSQDGADILVATPGRLHDVLERYAHL--FDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQRTKEVQATPQTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASILTQHPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWSTDTRGIEYKDKKREAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQILEEWEELGREERLFKRLRNHKISREEYEKEL 624
            + F    P L A +L  I  LGFT+MTPVQ++T+PLFLTNKDV V+A TGSGKTLAF++P VEM+ RR    +  +V             A+++SPTRELA+QI+  A +F S       +LL +GGT V  D    R ++    ++V TPGR+ D+L R A L   D +E EVLILDEADTLL+MGF  ++  IL  LPKQRRTGLFSATQT+EV+ LARAGLRNPATV+VQ+ +  TK    TP TL+NFY T  + + KL  LL F+     +K +VFF TCA+VD+F ++L               + E    +V  LHGKM  KKR      F  A  G   +L+CTDV ARG+D+PDVDWIIQ++PPQDP+FF+HRVGRTARAGR G +LTFL   E  YV FL ++ VPL     EE+ +  S  +   VLE VK L + DR+V+E+GTKA+ +FVR+YKEHQCQFIFRF  L+L  +A  +AL +LPK+ EL      VAF         I YKDK RE  R                                                       QQI+EEWEEL +EE LFK+ +  K+++EEYE  L
Sbjct:    1 MKFSECTPPLCAEVLTGIHELGFTEMTPVQSATIPLFLTNKDVAVDASTGSGKTLAFVLPTVEMLRRRLLATQDDDVANVLSTKKYSQLMAMVLSPTRELARQIYDQAVYFFSRVLPDVHVLLFVGGTSVEEDMAAIRAAKGHVSVIVGTPGRIEDMLNRVAELAILDTKEFEVLILDEADTLLDMGFDVSINNILSKLPKQRRTGLFSATQTQEVKALARAGLRNPATVSVQLAS-NTK----TPSTLTNFY-TAVEYDAKLATLLRFVQSKPTEKHIVFFSTCASVDFFGAVLAHL-----------TKAEVPDVSVVTLHGKMQPKKRIAHYDEFVQATSG---LLVCTDVVARGIDLPDVDWIIQFDPPQDPNFFVHRVGRTARAGRSGSALTFLSPNEDAYVNFLSIRKVPL-----EEMNVTASAEDAVAVLEQVKALQLTDRDVVEKGTKAFISFVRSYKEHQCQFIFRFKDLNLAKVATGFALFQLPKINELRCLD-NVAFTPSGVKVVDIPYKDKAREKQR--------QKKLLEIAAEHKAEKLDRFEKKQADKKRKLAAVEDGPRRREKKKGMHQQIVEEWEELEKEEHLFKKFKRGKLTKEEYEAAL 585          
BLAST of NO06G03820 vs. NCBI_GenBank
Match: OWZ24543.1 (DEAD/DEAH box RNA helicase [Phytophthora megakarya])

HSP 1 Score: 451.8 bits (1161), Expect = 4.000e-123
Identity = 264/525 (50.29%), Postives = 347/525 (66.10%), Query Frame = 0
Query:   21 LSFQALKPALHANMLAAIGALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMI--------LRRERQLKKHEVGAIIISPTRELAKQIFKVATHFCSHAGLRTPLLL-IGGTDVVGD-NFNRFSQDGADILVATPGRLHDVLER-YAHLFDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQRTKEVQATPQTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASILTQHPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWSTDTRGIEYKDKKREAAR 535
            + F   +PAL   +LA   ALGF  MTPVQA+T+PLFL+NKDVCV+A TGSGKTLAF++P V+++        +   R     ++ A++ISPTRELA+QIF+ A  F + A     LLL +GGT V  D    R +     +++ TPGR  D+L R      + RE E+LILDEADTLL+MGF+ +L  IL HLPKQRRTGLFSATQT+EV+ LARAGLRNPAT++VQV N      Q TP TL N+Y      +++L  L  F+   K +K++VFF TC +VD+F+ +L +  +FK     G ++       V ALHGKM QKKR      F+A   G   +L+CTDV ARG+D+PDVDWI+QY+PPQDP+FF+HRVGRTARAGR G +L+FL   E  YV FL+++ VP      EE+ LP    E   VL  VK   M+DR++LE+GTKA+ AFVR+YKEHQCQFIFRF +LDL  +AR + LL+LPK+ EL +  +++ FEK    T  I++KDK RE  R
Sbjct:    1 MRFHDFQPALCPEILAETDALGFEHMTPVQAATLPLFLSNKDVCVDACTGSGKTLAFVLPIVQLLKAKLADGSITAPRHSNVTKLAAMVISPTRELARQIFECAEKFFTRALPSVQLLLFVGGTSVDEDLALIRGAVGKCSVVIGTPGRTEDLLNRCVGSSVETREFEMLILDEADTLLDMGFEVSLNKILEHLPKQRRTGLFSATQTQEVKALARAGLRNPATISVQVAN----NTQVTPATLENYYCLVGH-DQRLSALQHFVQSKKGEKLIVFFSTCGSVDFFSRVLEE--LFK-----GNKD-----FPVVALHGKMPQKKRTTNYDHFSALKSG---LLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVGRTARAGRSGCALSFLSSNEDAYVNFLKIRKVPC-----EEMTLPLDTMED--VLPKVKSFIMEDRDLLEKGTKAFMAFVRSYKEHQCQFIFRFKELDLGAVARGFCLLQLPKINELRN--VRIDFEKTDIKTTDIKFKDKAREKER 496          
BLAST of NO06G03820 vs. NCBI_GenBank
Match: ETI43712.1 (hypothetical protein F443_11444, partial [Phytophthora parasitica P1569] >ETK83771.1 hypothetical protein L915_11136, partial [Phytophthora parasitica])

HSP 1 Score: 450.3 bits (1157), Expect = 1.200e-122
Identity = 265/528 (50.19%), Postives = 345/528 (65.34%), Query Frame = 0
Query:   21 LSFQALKPALHANMLAAIGALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMI--------LRRERQLKKHEVGAIIISPTRELAKQIFKVATHFCSHAGLRTPLLL-IGGTDVVGD-NFNRFSQDGADILVATPGRLHDVLER-YAHLFDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQRTKEVQATPQTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASILTQHPMFKKALGGGGREGESGGSN---VAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWSTDTRGIEYKDKKREAAR 535
            + F   KPAL   +LA   ALGF  MTPVQA+T+PLFL+NKDVCV+A TGSGKTL+F++P V+++        +   R     ++ A+IISPTRELA+QIF+ A  F + A     LLL +GGT V  D +  R +     +++ TPGR  D+L R      + RE E+LILDEADTLL+MGF+ +L  IL HLPKQRRTGLFSATQT+EV+ LARAGLRNPAT++VQV N      Q TP TL N+Y      +++L  L  F+   K +K++VFF TC +VD+F+ +L +  +FK             G N   V ALHGKM QKKR      F+    G   +L+CTDV ARG+D+PDVDWI+QY+PPQDP+FF+HRVGRTARAGR G +L+FL   E  YV FL+++ VP      EE+ LP    E   VL  VK   ++DR++LE+GTKA+ AFVR+YKEHQCQFIFRF +LDL   AR + LL+LPK+ EL +  +++ FEK    T  I+YKDK RE  R
Sbjct:   16 MRFHDFKPALCPEILAETDALGFEHMTPVQAATLPLFLSNKDVCVDACTGSGKTLSFVLPIVQLLKAKLADGSITAPRHADLTKLVAMIISPTRELARQIFECAEKFFTRALPSVQLLLFVGGTSVDEDLSLIRGAVGKCSVVIGTPGRTEDLLNRCVGSSVETREFEMLILDEADTLLDMGFEVSLNKILEHLPKQRRTGLFSATQTQEVKALARAGLRNPATISVQVAN----NTQVTPATLQNYYCLVGH-DQRLSALHHFVQSKKGEKLIVFFSTCGSVDFFSRVLEE--LFK-------------GKNDFPVVALHGKMPQKKRTTNYDHFSTLKSG---LLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVGRTARAGRSGCALSFLSSNEDAYVNFLKIRKVPC-----EEMTLPLDTMED--VLPKVKSFILEDRDLLEKGTKAFMAFVRSYKEHQCQFIFRFKELDLGAAARGFCLLQLPKINELRN--VRINFEKTDIKTTDIKYKDKAREKER 511          
The following BLAST results are available for this feature:
BLAST of NO06G03820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26360.11.200e-24773.81atp-dependent rna helicase ddx55 [Nannochloropsis ... [more]
XP_002290486.12.300e-13145.81predicted protein, partial [Thalassiosira pseudona... [more]
XP_009515846.12.200e-12654.23hypothetical protein PHYSODRAFT_309392 [Phytophtho... [more]
EJK55144.15.000e-12641.95hypothetical protein THAOC_25148 [Thalassiosira oc... [more]
CBJ27307.12.500e-12553.25DEAD box helicase [Ectocarpus siliculosus][more]
GAQ90565.12.500e-12550.67DEAD-box ATP-dependent RNA helicase family protein... [more]
XP_009827342.18.000e-12447.75hypothetical protein H257_04500 [Aphanomyces astac... [more]
XP_008872119.13.000e-12345.88hypothetical protein H310_08222 [Aphanomyces invad... [more]
OWZ24543.14.000e-12350.29DEAD/DEAH box RNA helicase [Phytophthora megakarya... [more]
ETI43712.11.200e-12250.19hypothetical protein F443_11444, partial [Phytopht... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000095NSK000095Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03820.1NO06G03820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597793gene_6713Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100031g29gene4150Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03820.1NO06G03820.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03820 ID=NO06G03820|Name=NO06G03820|organism=Nannochloropsis oceanica|type=gene|length=2396bp
AACAGAGCATAATGGCCACCGCGACCACCTCCAGCAGCGGTGGGGGCGGC
CCCAAGAAGCCTCTCCATCCCTTGTCGTTCCAGgtatatttcctttcgct
ttcatatcctatggtcccaaccgacctcccctgtctctccctgcgtccac
acctttccactccctgttcattactatcgatcaatgcaaacaccttttcc
agGCATTAAAACCCGCCTTACACGCCAATATGCTCGCGGCCATCGGTGCC
CTGGGCTTCACGCAAATGACCCCCGTACAAGCCTCCACCGTCCCTCTCTT
CCTCACCAACAAGGACGTGTGTGTCGAAGCCGTCACGGGCTCCGGCAAAA
CCCTGGCCTTCATCGTACCGGCCGTGGAGATGATATTACGACGGGAAAGA
CAGCTGAAGAAACACGAGGTGGGTGCCATAATTATTTCGCCGACACGGGA
ACTGGCCAAGCAGATCTTCAAAGTCGCGACGCACTTTTGCTCTCACGCGG
GCTTGAGGACCCCGTTGCTTTTAATAGGCGGCACCGATGTTGTAGGGGAC
AATTTCAACCGCTTCTCACAAGATGGCGCGGATATTTTGGTGGCGACGCC
AGGGAGGTTGCATGATGTGTTGGAACGCTATGCCCATCTGTTTGATCTGA
GAGAGCTCGAAGTCCTCATCCTCGACGAAGCTGACACTTTACTCAACATG
GGCTTCAAGGCCACCTTAACGGCCATTCTGGGCCACCTTCCCAAGCAACG
ACGTACGGGTTTATTTAGTGCCACGCAGACGAGAGAGGTGAGGGAGCTGG
CAAGGGCGGGATTGAGGAACCCGGCGACGGTAGCGGTACAGGTGGTGAAC
CAACGGACGAAGGAAGTTCAAGCCACTCCCCAGACACTGTCAAATTTCTA
TTGGACGTGCAAAAAGCCCGAGGAAAAACTGGGGAGGCTGTTGGCGTTTC
TGACGAAGCATAAGAAGGATAAGGTGATGGTCTTTTTCATAACTTGTGCG
GCAGTCGACTACTTTGCGTCTATTTTGACACAGCACCCTATGTTCAAGAA
GGCACTAGGAGGTGGGGGGAGGGAGGGAGAAAGTGGGGGGAGCAACGTGG
CGGCGTTGCATGGAAAAATGGTGCAGAAGAAAAGGGATGGTATGCTGGGT
CGATTCACTGCAGCAGCAGTCGGTGGAGGGGCTGTGTTGTTGTGCACAGA
TGTTGCGGCGCGGGGGTTAGACGTGCCAGATGTAGACTGGATCATCCAGT
ACGAGCCACCGCAAGACCCTTCCTTTTTTATTCACCGCGTGGGGAGGACG
GCGCGGGCGGGGAGGATGGGGAAGTCTTTGACGTTCTTGCTGGAGGCGGA
GGCGCCGTATGTCGAGTTTTTGCGGTTGAAGAGTGTGCCCTTGGCGCAGC
TGGAGGAGGAGGAGGTGGCCTTACCGGAAAGCGACCCGGAGGGGGCTTTG
GTGCTTGAGGGGGTGAAAGATTTGGCGATGAAGGATAGGGAGGTGTTAGA
ACAGGGGACCAAGGCATACACGGCCTTCGTGCGGGCGTACAAGGAGCATC
AGTGTCAGTTTATTTTCCGATTTGTGCAGTTGGACCTGGAAGGGTTGGCA
CGTGCTTATGCTTTATTGAGGCTACCGAAGATGCCGGAGCTGACGCACCA
CCCGATCAAGGTGGCTTTCGAGAAGTGGTCAACGGACACCCGAGGCATTG
AATATAAGGATAAAAAGAGGGAGGCGGCTCGGAGGAAAAGGATGGAGGAG
ACGGCGAGTGAGAGGGAGAGGGAGCAGCGGAAGGCGGAGATGAGAAAGAC
GAAAAAGGAGGGGGATATGGAAAAGAAGAAGGTAGGAGATGGTATTGGAG
AGGAGGAAGCGGAGAAGAGACAAAGGAAAAAAAAGAAGGGGAAGCACCAG
CAGATTTTGGAGGAGTGGGAGGAGTTGGGGAGGGAGGAGAGGTTGTTCAA
GAGGCTCCGGAATCACAAAATCAGCAGAGAAGAATACGAGAAGGAGTTGA
GGAAGAGGGGGAGTGATGAGGAGGGGGTGGAAGAGAAGGAGGATGAGAGT
GGCGATGGTGGTAGCGGGGGGGATGATGAGGAAGAAGGGTCGATGTCGTC
ATCGGGTTTGATGAATGATGAGGACAGGAGTGAGATTGAGGATGATGACA
ACGAGGGGCAGCCACACAAAAAGAGGCAGGGTGTAGGAAGAGGAGCACAG
CGGCCGCAGCGACACAAACAGCAGCAGCAGCAGCAGTCAAAGAAAAAGAG
TCTTTTGCACAGCAACAAGATGAAGCAGAAGCAGAGGCAGAAGGCGGGCG
GGTGGGTCTCGCAAAAACGAGGGTGAGAAAAAGACCTGGGACGTGTTTCA
AATTGACAAGATAATTAAAGAAAGCAAGCGACGAAAAATTTTCGAA
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protein sequence of NO06G03820.1

>NO06G03820.1-protein ID=NO06G03820.1-protein|Name=NO06G03820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=732bp
MATATTSSSGGGGPKKPLHPLSFQALKPALHANMLAAIGALGFTQMTPVQ
ASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMILRRERQLKKHEVGAI
IISPTRELAKQIFKVATHFCSHAGLRTPLLLIGGTDVVGDNFNRFSQDGA
DILVATPGRLHDVLERYAHLFDLRELEVLILDEADTLLNMGFKATLTAIL
GHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQRTKEVQATP
QTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASILT
QHPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGG
AVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSL
TFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAM
KDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPK
MPELTHHPIKVAFEKWSTDTRGIEYKDKKREAARRKRMEETASEREREQR
KAEMRKTKKEGDMEKKKVGDGIGEEEAEKRQRKKKKGKHQQILEEWEELG
REERLFKRLRNHKISREEYEKELRKRGSDEEGVEEKEDESGDGGSGGDDE
EEGSMSSSGLMNDEDRSEIEDDDNEGQPHKKRQGVGRGAQRPQRHKQQQQ
QQSKKKSLLHSNKMKQKQRQKAGGWVSQKRG*
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Synonyms
Publications