NO06G03570, NO06G03570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G03570 vs. NCBI_GenBank
Match: EWM26345.1 (kdpg and khg aldolase [Nannochloropsis gaditana]) HSP 1 Score: 291.2 bits (744), Expect = 4.100e-75 Identity = 188/349 (53.87%), Postives = 215/349 (61.60%), Query Frame = 0 Query: 1 MRALAGSRSAAW-----PLLLLLGNGGNAWTLTSSFLLQQSSCGTPPSPMSPACRLVERQTHLIKAAARPFVDNDVAWLSRQEPVSSTQQHHDPHHTTIDTIPSTSMSPKEAHALVCLDACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLR------------XXXXXXXXXXXXXXPEQKLLPFALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTAL-RVGQTEKEKE 332 M A G R W LL G+AW S LLQ+ P + L IK AA+PF D+D AW S+TQ + T+P + + +EAHAL CLDACPLVAVLRGV D+ + + TLRQ GLTM+S+PAESPAG EGL+ ++ L P ALGAATV+S QVDLAAAAGASFISCPHTDP I+ RA HG+L LPGILTP+EAFLAL HGA VLKLFPSQA PPGMVASIAA+LPPP RLLVSGGV+A DMPAY A GA GFALGSTLF+ GLK GELA RAR F+ AL R E E E Sbjct: 1 MWATVGGRDTMWLSRYVLFLLWSTTAGDAWGPPRSPLLQRRE-RMPSGLYTSHTGLAYCSQPSIK-AAKPF-DDDPAWFPSPSSFSATQH---AGFSPPSTLPGPATTTREAHALACLDACPLVAVLRGVTTKDMYETLQTLRQAGLTMVSVPAESPAGFEGLKALASLISSSGAASSFWPSHAPTSGSGCDETLPPLALGAATVVSVAQVDLAAAAGASFISCPHTDPDIILRAHKHGILCLPGILTPTEAFLALKHGAKVLKLFPSQAVPPGMVASIAAILPPPTRLLVSGGVKAEDMPAYRAAGAKGFALGSTLFQAGLKGGELASRARAFIQALERAPDGEMEGE 343
BLAST of NO06G03570 vs. NCBI_GenBank
Match: WP_093149650.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Thalassobaculum litoreum] >SDF58424.1 2-dehydro-3-deoxyphosphogalactonate aldolase [Thalassobaculum litoreum DSM 18839]) HSP 1 Score: 145.6 bits (366), Expect = 2.800e-31 Identity = 84/205 (40.98%), Postives = 115/205 (56.10%), Query Frame = 0 Query: 113 LDACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLPFALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVF 318 L CPLVA+LRGV ++ V + L ++G ++ +P SP L+ + +LL +GA TVI PD VD AAG I PH D ++ RAK+ G + +PG TP EAF L GA LKLFP++AAPP ++ ++ AVLP +L GG+ M Y+ GATGF LGS L+KPG E+AE+A+ F Sbjct: 8 LARCPLVAILRGVTPDEVVDVALALEEQGFAIVEVPLNSPRPLDSIARLAAAVG---------DRLL---VGAGTVIEPDSVDDVLAAGGRLIVMPHADAAVVERAKSLGAVAVPGFATPGEAFAMLRAGADALKLFPAEAAPPPVLKAMRAVLPKQVPVLPVGGIMPESMEGYLQAGATGFGLGSALYKPGDTASEVAEKAKAF 200
BLAST of NO06G03570 vs. NCBI_GenBank
Match: WP_028793455.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Thalassobaculum salexigens]) HSP 1 Score: 144.8 bits (364), Expect = 4.800e-31 Identity = 84/205 (40.98%), Postives = 115/205 (56.10%), Query Frame = 0 Query: 113 LDACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLPFALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVF 318 L CPLVA+LRGV ++ V + L ++G ++ +P SP L+ + +LL +GA TVI PD VD AAG I PH D ++ RAK+ G + +PG TP EAF L GA LKLFP++AAPP ++ ++ AVLP +L GG+ M Y+ GATGF LGS L+KPG E+AE+A+ F Sbjct: 8 LARCPLVAILRGVTPDEVLDVALALEEQGFAIVEVPLNSPRPLDSIARLAAAVG---------DRLL---VGAGTVIEPDSVDDVLAAGGRLIVMPHADAAVVERAKSLGAVAVPGFATPGEAFAMLRAGADALKLFPAEAAPPPVLKAMRAVLPKQVPVLPVGGITPESMEGYLQAGATGFGLGSALYKPGDTASEVAEKAKAF 200
BLAST of NO06G03570 vs. NCBI_GenBank
Match: WP_094830470.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Bordetella genomosp. 1] >OZI67999.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Bordetella genomosp. 1]) HSP 1 Score: 143.7 bits (361), Expect = 1.100e-30 Identity = 89/219 (40.64%), Postives = 119/219 (54.34%), Query Frame = 0 Query: 102 MSPKEAHALVCLDACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLPFALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTA 321 M+ A + + ACPLVA+LRG+ + + L Q G +I +P SP + + PE L LGA TVI PD V AG + I PH+DP ++ RAKA G+L LPG+ TP+EAF AL GA LKLFP++ P ++ + AVL P LL GG+ ++ + A GA+GF LGS L+KPGL E+ RAR FV A Sbjct: 1 MTTSSARLALAMQACPLVAILRGIRPEEAAGIGQALYQAGFRLIEVPLNSPQPFDSI--------AAMRAVLPEDCL----LGAGTVIDPDDVTRVRDAGGAIIVMPHSDPAVIRRAKAEGMLSLPGVATPTEAFAALAAGADALKLFPAEQVGPPVLRAWRAVLRAP--LLPVGGITPHNLAEFAAAGASGFGLGSALYKPGLSADEVGARAREFVAA 205
BLAST of NO06G03570 vs. NCBI_GenBank
Match: WP_094828820.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Bordetella genomosp. 1] >OZI28894.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Bordetella genomosp. 1]) HSP 1 Score: 142.5 bits (358), Expect = 2.400e-30 Identity = 88/219 (40.18%), Postives = 118/219 (53.88%), Query Frame = 0 Query: 102 MSPKEAHALVCLDACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLPFALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTA 321 M+ A + + ACPLVA+LRG+ + + L G +I +P SP + + PE L LGA TVI PD V AG + I PH+DP ++ RAKA G+L LPG+ TP+EAF AL GA LKLFP++ P ++ + AVL P LL GG+ ++ + A GA+GF LGS L+KPGL E+ RAR FV A Sbjct: 1 MTTSSARLALAMQACPLVAILRGIRPEEAAGIGQALYHAGFRLIEVPLNSPQPFDSI--------AAMRAVLPEDCL----LGAGTVIDPDDVTRVRDAGGAIIVMPHSDPAVIRRAKAEGMLSLPGVATPTEAFAALAAGADALKLFPAEQVGPSVLRAWRAVLRAP--LLPVGGITPHNLAEFAAAGASGFGLGSALYKPGLSADEVGARAREFVAA 205
BLAST of NO06G03570 vs. NCBI_GenBank
Match: OYV41111.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Rhodospirillales bacterium 20-64-7]) HSP 1 Score: 139.8 bits (351), Expect = 1.500e-29 Identity = 83/209 (39.71%), Postives = 114/209 (54.55%), Query Frame = 0 Query: 113 LDACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLP-FALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTA 321 LD PL+A+LRGV A ++ + LR+ G ++ +P SP+ E +R Q L P +GA TV +PDQV A AG I PH DPV++ AKA GL+ PGI TP+E F AL GA LKLFP++ P ++ ++ +V P R L GG+ M ++ GA GF LGS L+KPG+ ++ AR FV A Sbjct: 6 LDRLPLIAILRGVRAEEVVPIGRALREAGFAIVEVPLNSPSPCESIRRLC-------------QDLGPDMLIGAGTVTTPDQVAAVAEAGGRIIVMPHGDPVVIRAAKAAGLVCTPGIATPTEGFAALAAGADALKLFPAEMLTPPVLKAMRSVFPAGTRFLPVGGITPDTMEPFVKAGAAGFGLGSALYKPGMAAADVGVHARAFVEA 201
BLAST of NO06G03570 vs. NCBI_GenBank
Match: KKB61448.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Robbsia andropogonis]) HSP 1 Score: 138.3 bits (347), Expect = 4.500e-29 Identity = 82/213 (38.50%), Postives = 119/213 (55.87%), Query Frame = 0 Query: 113 LDACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLPFALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTALRVGQ 326 + AC +VA+LRGV ++ + +L + G +I +P SP L + P++ + +GA TV+SPD V A AG I PH+D ++ A+ GL V PG+ TP+EAF AL GAHVLK+FP++ P +V + AV+P LL GG+ +M +++ GA GF LGS L+KPGL E+ +RA F+TA R Q Sbjct: 14 MQACGMVAILRGVRPDEVVDIGQSLYEAGFRIIEVPLNSPEPLRSI--------TALRQALPDEVM----VGAGTVLSPDDVAKIAQAGGQIIVMPHSDTAVIRAARDAGLAVAPGVATPTEAFAALAAGAHVLKMFPAELLGPAVVKAWRAVIPKSVPLLPVGGITPDNMTSFLEAGAQGFGLGSALYKPGLDAAEVGQRAHRFMTAWRTTQ 214
BLAST of NO06G03570 vs. NCBI_GenBank
Match: WP_055782210.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Sphingomonas sp. Leaf357] >KQS02217.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Sphingomonas sp. Leaf357]) HSP 1 Score: 138.3 bits (347), Expect = 4.500e-29 Identity = 85/208 (40.87%), Postives = 114/208 (54.81%), Query Frame = 0 Query: 114 DACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLPFALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTAL 322 D PLVA+LRG+ ++ V L G T+I +P SP L + +GA TV+S DQV A AG I P+T+P ++A + + GL LPG T +EAF AL+ GAH LK FP++A PG+V ++AAVLPP LV GG+ MP ++A GA GF LGS L++PG ++A AR F TAL Sbjct: 12 DRFPLVAILRGITPDEVEAVGDVLVDGGFTLIEVPLNSPDPLVSIERLARHLEGVA------------MVGAGTVLSTDQVSAVANAGGRMIVSPNTNPEVIAASVSVGLASLPGCWTATEAFAALHAGAHALKFFPAEAMSPGVVKALAAVLPPAVPKLVVGGITPETMPPWVAAGAAGFGLGSALYRPGDTAEQVAIHARAFATAL 207
BLAST of NO06G03570 vs. NCBI_GenBank
Match: WP_082103140.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Robbsia andropogonis]) HSP 1 Score: 138.3 bits (347), Expect = 4.500e-29 Identity = 82/213 (38.50%), Postives = 119/213 (55.87%), Query Frame = 0 Query: 113 LDACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLPFALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTALRVGQ 326 + AC +VA+LRGV ++ + +L + G +I +P SP L + P++ + +GA TV+SPD V A AG I PH+D ++ A+ GL V PG+ TP+EAF AL GAHVLK+FP++ P +V + AV+P LL GG+ +M +++ GA GF LGS L+KPGL E+ +RA F+TA R Q Sbjct: 6 MQACGMVAILRGVRPDEVVDIGQSLYEAGFRIIEVPLNSPEPLRSI--------TALRQALPDEVM----VGAGTVLSPDDVAKIAQAGGQIIVMPHSDTAVIRAARDAGLAVAPGVATPTEAFAALAAGAHVLKMFPAELLGPAVVKAWRAVIPKSVPLLPVGGITPDNMTSFLEAGAQGFGLGSALYKPGLDAAEVGQRAHRFMTAWRTTQ 206
BLAST of NO06G03570 vs. NCBI_GenBank
Match: SDI28600.1 (2-dehydro-3-deoxyphosphogalactonate aldolase [Propionivibrio dicarboxylicus]) HSP 1 Score: 137.9 bits (346), Expect = 5.900e-29 Identity = 85/210 (40.48%), Postives = 115/210 (54.76%), Query Frame = 0 Query: 115 ACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLP--FALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTALR 323 A PL+AVLRG+ + + L EG +I +P SP E + +K LP +GA TV++P+QV A G + PH+D ++ AK GLL +PG+ TP+EAF AL GA LKLFP++ P +V SI VLP L+ GG+ +M YI GA+ F LGS L+KPG++ EL +RAR FV ALR Sbjct: 18 ALPLIAVLRGIRPAEAATLGKVLYDEGFRLIEVPLNSPEPFESIAQI--------------RKALPADAVVGAGTVLAPEQVVSLKACGGDIVFMPHSDLEVVRAAKRGGLLCVPGVATPTEAFAALAAGADALKLFPAEMIVPKIVKSIGVVLPKGTCLVPFGGITPDNMGPYIEAGASAFGLGSALYKPGMRADELGDRARAFVAALR 213 The following BLAST results are available for this feature:
BLAST of NO06G03570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G03570 ID=NO06G03570|Name=NO06G03570|organism=Nannochloropsis oceanica|type=gene|length=1014bpback to top protein sequence of NO06G03570.1 >NO06G03570.1-protein ID=NO06G03570.1-protein|Name=NO06G03570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=338bpback to top Synonyms
Publications
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