NO06G03530, NO06G03530 (gene) Nannochloropsis oceanica

Overview
NameNO06G03530
Unique NameNO06G03530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3163
Alignment locationchr6:973613..976775 -

Link to JBrowse

Properties
Property NameValue
DescriptionEndonuclease/exonuclease/phosphatase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:973613..976775 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR005135Endo/exonuclease/phosphatase
Homology
BLAST of NO06G03530 vs. NCBI_GenBank
Match: EWM26348.1 (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 190.7 bits (483), Expect = 7.700e-45
Identity = 102/205 (49.76%), Postives = 131/205 (63.90%), Query Frame = 0
Query:    8 AFSILTWNIYFAPHQWATRMQHILAECERLQPDVLCFQEVLPPFMALLQDEEKPTELMISSNNDENASGGRNSWLARNDYICSTLDPKGVVPYGVLTMVKRKHRPHFQSLDLPSRMGRRLLLTHLESMGRGVEGEEVE-------SKGKLIEEWIIGNVHLESLDSTTLRAEQLRNAGVSLSLKEER-INVVLCGDFNFCSERNY 205
            AFS+LTWN+YFAP QW TRM++IL E  RLQPDV+CFQEV+P F+ LLQ           SN+D        +WL  NDY+ STL+P  + PYGVLT+ KR H+P F+++DLP+RMGRRLLLTHL  +G G   +E         SKG   + W +GNVHLESL+S  LRAEQL     +L   E+R   V+L GDF   ++  +
Sbjct:   16 AFSVLTWNVYFAPFQWETRMKYILDEASRLQPDVICFQEVVPGFLTLLQRPSNSRWSFSDSNSD-------TTWLEHNDYLPSTLNPDALTPYGVLTLAKRVHKPVFETVDLPTRMGRRLLLTHLGCIGEGKAMKEKNESFHAEYSKGH--KGWTVGNVHLESLNSAPLRAEQLTTISQALREAEQRGRRVILGGDFKLSNKTGW 211          
BLAST of NO06G03530 vs. NCBI_GenBank
Match: XP_004356772.1 (endonuclease/exonuclease/phosphatase family protein [Acanthamoeba castellanii str. Neff] >ELR24872.1 endonuclease/exonuclease/phosphatase family protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 132.1 bits (331), Expect = 3.300e-27
Identity = 104/337 (30.86%), Postives = 147/337 (43.62%), Query Frame = 0
Query:    7 TAFSILTWNIYFAPHQWATRMQHILAECERLQPDVLCFQEVLPPFMALLQDEEKPTELMISSNNDENASGGRNSWLARNDYICSTLDPKGVVPYGVLTMVKRKHRPHFQSLDLPSRMGRRLLLTHLESMGRGVEGEEVESKGKLIEEWIIGNVHLESLDSTTLRAEQLRNAGVSLSLKEERINVVLCGDFNFCSERNYDIGDSLQSLENEVLPLALPSFQDLWPSVKKGTKE--EKEGFTFDGTRNTLIRMPRPDPQMRYDRVLWRGTGRKXXXXXXXXXXXXXXXXQAQEKLKGSMAEVAGRGWRPRDIRLVGTDPVKG--GLFLSDHFGLLATFE 340
            T+  + T+N++F  +    R +HIL+    L  DV+C QE    ++  + D E                        +  Y  S ++ +    YGV+ ++ R          LP+ MGRR L+            EE  S         IG VHLESLDS  LRAEQL      L+      +  L GDFNF S+RN+  G  +  LEN+ +    P + D+WP+++    +  E++G+TFD   N   RM R   QMRYDRVLW+                                  AG  WRP+ I L GT P+KG  G++ SDHFGL+   E
Sbjct:   66 TSLRLATYNVFFGQNTMRGRFRHILSMLPELDADVICVQEANMEWIEEMTDNE----------------------YVQQHYFASDVNGRTFNGYGVV-ILSRIPMADLTMWKLPTSMGRRALIATY------TINEETVS---------IGTVHLESLDSAQLRAEQLEKISGILASSP---HAGLMGDFNFDSDRNFRKG--VMPLENDNIAAHYPDYVDVWPTLRPADPKGPEEKGYTFDSEVN---RMIRQFEQMRYDRVLWKS---------------------------------AGGQWRPKRIELFGTAPMKGHIGVWPSDHFGLVTDLE 323          
BLAST of NO06G03530 vs. NCBI_GenBank
Match: XP_008613507.1 (hypothetical protein SDRG_09359 [Saprolegnia diclina VS20] >EQC32821.1 hypothetical protein SDRG_09359 [Saprolegnia diclina VS20])

HSP 1 Score: 132.1 bits (331), Expect = 3.300e-27
Identity = 86/268 (32.09%), Postives = 128/268 (47.76%), Query Frame = 0
Query:    6 PTAFSILTWNIYFAPHQWATRMQHILAECERLQPDVLCFQEVLPPFMALLQDEEKPTELMISSNNDENASGGRNSWLARNDYICSTLDPKGVVPYGVLTMVKRKHRPHFQSLDLPSRMGRRLLLTHLESMGRGVEGEEVESKGKLIEEWIIGNVHLESLDSTTLRAEQLRNAGVSLSLKEERINVVLCGDFNFCSERNYDIG-----DSLQSLENEVLPLALPSFQDLWPSVKKGTKEEKEGFTFDGTRNTLIRMPRPDPQMRYDRVL 269
            PT   ++TWN++F     A R   ++ +   L PDV+C QEV P  ++ ++        ++ +  D +                    P+ V PYG L + +R   P F +  LPS+MGR ++   +E     + G             ++G VHLESL++  +RA QLR    +L+      N VLCGDFNF   + +        D L  LEN+VL +ALP F+D+WP +  G +    G TFDG  N +    R +  MRYDRVL
Sbjct:   71 PTRLRVVTWNMWFDHRDQALRFDALIMQVLALNPDVVCLQEVTPQVLSAIE-----ASALLQATYDHS--------------------PEPVYPYGCLVLARRTLHPAFATTPLPSKMGRSMVTCVVEGHMGALPG-------------VVGTVHLESLNAPAVRAAQLRACAAALA---PHANAVLCGDFNFDDTQAWGDWHRKECDRLTPLENDVLGIALPEFEDVWPLLCPGVR----GATFDGAHNAVCIADRHE-IMRYDRVL 292          
BLAST of NO06G03530 vs. NCBI_GenBank
Match: XP_012211057.1 (hypothetical protein SPRG_16340 [Saprolegnia parasitica CBS 223.65] >KDO18236.1 hypothetical protein SPRG_16340 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 128.6 bits (322), Expect = 3.600e-26
Identity = 92/274 (33.58%), Postives = 131/274 (47.81%), Query Frame = 0
Query:    6 PTAFSILTWNIYFAPHQWATRMQHILAECERLQPDVLCFQEVLPPFMALLQDEEKPTELMISSNNDENASGGRNSWLARNDYICSTLDPKGVVPYGVLTMVKRKHRPHFQSLDLPSRMGRRLLLTHLESMGRGVEGEEVESKGKLIEEWIIGNVHLESLDSTTLRAEQLRN-AGVSLSLKEERINVVLCGDFNFCSERNYD--IGDSLQSLENEVLPLALPSFQDLWPSVKKGTKEEKEGFTFDGTRNTLIRMPRPDPQMRYDRVL-----WRG 272
            PT   ++TWN++F     A R   ++ +   L PDV+C QEV P  ++ ++                       S L ++ Y  S   P+ V PYG L + +R  RP F +  LPS+MGR ++               V+     + + IIG VHLESL++  +R  QLR  A V L       N VLCGDFNF   + +     D ++ LEN+VL + LP F+D WP +  G +    G TFDG  N +    R +  MRYDRVL     W+G
Sbjct:   39 PTRLRLVTWNMWFDDRAQAQRFDALIVDVLALNPDVVCLQEVTPQVLSAIE----------------------ASALLQSTYEHS---PEPVSPYGCLILARRALRPKFANTPLPSKMGRSMVTC------------VVQGHMGTLPDVIIGTVHLESLNAPAMREAQLRACAAVFL----PHANAVLCGDFNFDDTQAWGDWHRDRIRPLENDVLAVTLPDFEDAWPKLCPGVR----GATFDGVHNPVCVADR-NEVMRYDRVLIKRGQWQG 266          
BLAST of NO06G03530 vs. NCBI_GenBank
Match: XP_002670813.1 (predicted protein [Naegleria gruberi] >EFC38069.1 predicted protein [Naegleria gruberi])

HSP 1 Score: 125.9 bits (315), Expect = 2.300e-25
Identity = 115/345 (33.33%), Postives = 158/345 (45.80%), Query Frame = 0
Query:    4 LVPTAFSILTWNIYFAPHQWATRMQHI---LAECERLQPDVLCFQEVLPPFMALLQDEEKPTELMISSNNDENASGGRNSWLARNDYICSTLDPKGVVPYGVLTMVKRKHRPHFQSL--DLPSRMGRRLLLTHLESMGRGVEGEEVESKGKLIEEWIIGNVHLESLDSTTLRAEQLRNAGVSLSLKEERINVVLCGDFNFCSERNYDIGDSLQSLENEVLPLA-LPSFQDLWPSVKKGTKEEKEGFTFDGTRNTLIRMPRPDPQMRYDRVLWRGTGRKXXXXXXXXXXXXXXXXQAQEKLKGSMAEVAGRGWRPRDIRLVGTDPVKGG--LFLSDHFGLLATFEK 341
            L+P   +I+T+N++FAP     RM+ I   L   E L PDV+CFQEV    +  +   E   +    S++              NDY  +T+D     PYGVL M  RK  P  +     LPSRM R  L   L             + GK  E + I  VHLESL ST +R +QL    V    ++   N VLCGDFNF SERNYD  D L  LEN+ L      S+ D+W  +K  + E   G TFD + NT+++  + +  MRYDRV+                                   +  + W+P  + L+GT P++    +FLSDHFG+    EK
Sbjct:   14 LIPKYLNIVTFNVWFAPLMMKERMEGIMQMLMAREEL-PDVMCFQEVTDEALEFIASHELIRKEYYLSDSP-------------NDYY-TTVD-----PYGVL-MAVRKGLPVRRMFYNTLPSRMYRACLSVEL-------------NDGK--ESFCISTVHLESLASTDMRFKQL---DVISEFQQAFDNAVLCGDFNFDSERNYD-EDYLPYLENDYLNNENWKSYTDIWKELKYPSNE--LGKTFDTSVNTMLK-GQKEELMRYDRVM-----------------------------------LKSKSWKPTFVELLGTSPIQTNPDIFLSDHFGICTRIEK 280          
BLAST of NO06G03530 vs. NCBI_GenBank
Match: OQS05301.1 (hypothetical protein THRCLA_02551 [Thraustotheca clavata])

HSP 1 Score: 125.2 bits (313), Expect = 4.000e-25
Identity = 96/333 (28.83%), Postives = 144/333 (43.24%), Query Frame = 0
Query:    6 PTAFSILTWNIYFAPHQWATRMQHILAECERLQPDVLCFQEVLPPFMALLQDEEKPTELMISSNNDENASGGRNSWLARNDYICSTLDPKGVVPYGVLTMVKRKHRPHFQSLDLPSRMGRRLLLTHLESMGRGVEGEEVESKGKLIEEWIIGNVHLESLDSTTLRAEQLRNAGVSLSLKEERINVVLCGDFNFCSERNYDIGDSL--QSLENEVLPLALPSFQDLWPSVKKGTKEEKEGFTFDGTRNTLIRMPRPDPQMRYDRVLWRGTGRKXXXXXXXXXXXXXXXXQAQEKLKGSMAEVAGRG-WRPRDIRLVGTDPVKG-GLFLSDHFGL 335
            P+  SI+TWN++F P   A R Q ++ E     PD++C QEV   F+ +L                       +S L ++++I S   P  + PYG L + ++   P F  + LPSRMGR L+   +     G  G +  +         +G VHLESL+S   RA QL+     L   +   N +LCGDFNF   + +   + +  Q LEN VL   L  + D+W  +       + G TFDG+ N  + +P     MRYDR+L +                                    RG W+   I ++G  P+   G+  SDH+GL
Sbjct:   64 PSRLSIVTWNVWFDPIAQAQRYQALIKEIINQSPDIICLQEVTSNFLEIL----------------------HSSALIQSEFISS---PGPIYPYGCLILARKTLEPEFYDVPLPSRMGRTLVYCEI----LGPNGNDKSA---------VGTVHLESLNSRDTRAAQLKVCSEQL---KPYSNAILCGDFNFDDTQEWGAWERVITQPLENHVLNEILHDYDDVWSYL----HPNERGVTFDGSTNP-VCIPEVKEIMRYDRILLK------------------------------------RGDWKAAAINMLGEQPLDATGIKASDHYGL 314          
BLAST of NO06G03530 vs. NCBI_GenBank
Match: OQR85928.1 (hypothetical protein ACHHYP_11178 [Achlya hypogyna])

HSP 1 Score: 112.8 bits (281), Expect = 2.000e-21
Identity = 98/333 (29.43%), Postives = 140/333 (42.04%), Query Frame = 0
Query:    6 PTAFSILTWNIYFAPHQWATRMQHILAECERLQPDVLCFQEVLPPFMALLQDEEKPTELMISSNNDENASGGRNSWLARNDYICSTLDPKGVVPYGVLTMVKRKHRPHFQSLDLPSRMGRRLLLTHLESMGRGVEGEEVESKGKLIEEWIIGNVHLESLDSTTLRAEQLRNAGVSLSLKEERINVVLCGDFNFCSERNYDI--GDSLQSLENEVLPLALPSFQDLWPSVKKGTKEEKEGFTFDGTRNTLIRMPRPDPQMRYDRVLWRGTGRKXXXXXXXXXXXXXXXXQAQEKLKGSMAEVAGRG-WRPRDIRLVGTDPV-KGGLFLSDHFGL 335
            PT   ++TWN++F     A R + + A+   L  DV+C QEV P F+A ++                      +S L +  Y   T  P  V PYG L + +R   P F  + LPSRM R L++       R + G              +G VHLESL+S  +R EQLR    +L+      N +LCGDFNF   + +      S   LEN+VL   L ++ D+W  +    +    G TFDG  N    +  P   MRYDR++ +                                    RG W P  I L+G  P+   G+ +SDH+GL
Sbjct:   74 PTQLRVVTWNVWFDRLAQAQRYEALFAQVLALAADVVCLQEVTPQFLAAVE----------------------HSVLLQAVY---THSPAPVYPYGCLILARRTLEPAFDHVPLPSRMDRVLIVC------RVIGG-------------AVGTVHLESLNSPIVRDEQLRVCEAALA---PFTNAILCGDFNFDDTQAWGSWHRPSNAPLENDVLATVLHAYVDVWTYL----RPHDRGATFDGGNNPRC-IADPLEVMRYDRIMLK------------------------------------RGAWTPGSIALLGEAPLDPTGMKVSDHYGL 318          
BLAST of NO06G03530 vs. NCBI_GenBank
Match: OLQ02175.1 (hypothetical protein AK812_SmicGene15011 [Symbiodinium microadriaticum])

HSP 1 Score: 107.1 bits (266), Expect = 1.100e-19
Identity = 102/344 (29.65%), Postives = 137/344 (39.83%), Query Frame = 0
Query:   10 SILTWNIYFAPHQWATRMQHILAECERLQPDVLCFQEVLPPFMALLQDEEKPTELMISSNNDENASGGRNSWLARNDYICSTLDPKGVVPYGVLTMVKRKHRPHFQSLDLPSRMGRRLLLTHLESMGRGVEGEEVESKGKLIEEWIIGNVHLESLDSTTLRAEQLRNAGVSLSLKEERINVVLCGDFNFCSERNYDIGDSLQSLENEVLPLALPSFQDLWPSVKKGTKEEKEGFTFDGTRNTLIRMPRPDPQMRYDRVL-----WRGTGRKXXXXXXXXXXXXXXXXQAQEKLKGSMAEVAGRGWRPR-DIRL------VGTDPVKGGLFLSDHFGLLATFEKE 342
            ++LT N++F       R + +L     L P + CFQEV+P     L++                       W   +    ST D   V PYGV+  V+      F+   LP+ M R LLL  +  +                    +G VHLESL +  +R EQLR      S+     NV+L GDFNF SERN+      + LEN  L L L  F DLWP+++ G    + G TFD   N  I       QMRYDRV+     W  T  +                +     +    +    G R   D  L        T    G LFLSDHFGLL T + +
Sbjct:    4 TVLTLNLWFDLKLQEARTRALLEVIRSLSPSLCCFQEVVPQVARQLRE-------------------ALPGWQCSD----STPDNATVQPYGVMAFVQPGISAEFELHPLPTAMSRSLLLVRVPGL-------------------TVGTVHLESLANPRMREEQLRQCA---SILAPCSNVMLVGDFNFDSERNFKAPH--EPLENAALGL-LQDFIDLWPTLRPG----EPGKTFDSRLNPYI---GEYEQMRYDRVMVKLEAWTATQIRLVGDEPLNHLVKLTPMEEDWLQRPPTPKRPQPGCRKSIDFELDVTPTAEETSSSSGRLFLSDHFGLLTTLQSK 292          
BLAST of NO06G03530 vs. NCBI_GenBank
Match: CUG87878.1 (endonuclease/exonuclease/phosphatase, putative [Bodo saltans])

HSP 1 Score: 92.8 bits (229), Expect = 2.200e-15
Identity = 80/266 (30.08%), Postives = 114/266 (42.86%), Query Frame = 0
Query:    8 AFSILTWNIYFAPHQWATRMQHILAECERLQPDVLCFQEVLPPFMALLQDEEKPTELMISSNNDENASGGRNSWLARNDYICSTLDPKGVVPYGVLTMVKRKHRPHFQSLDLPSRMGRRLLLTHLESMGRGVEGEEVESKGKLIEEWIIGNVHLESLDSTTLRAEQLRNAGVSLSLKEERINVVLCGDFNFCSERNYDIGDSLQSLENEVLPLALPSFQDLWPSVKKGTKEEK-----EGFTFDGTRNTLIRMPRPDPQMRYDRVL 269
            A  +LT+N++F       R   I        PDV+C QEV     ++L +E    E   S   +E +                         Y    +V +++  HF ++  PS MGR LL      +GR      V       E+ I+   H ESL S  LR +QL  A  +L+    R   +LCGDFNFCS +N+  G    +LEN VL   LP   D+WP +      E       G+TFD  +N  I     + +MRYDR++
Sbjct:   48 AVKLLTYNVWFDETFLRARTHQIARLLRAAAPDVVCLQEVTAESYSILLNELDGYE--FSPLYEERS-------------------------YFATMIVAKRYASHFHTVRTPSEMGRFLL------VGR------VRLSQASSEDLIVVTSHFESLSSRPLRRKQLSIAAETLNNFPGR--WILCGDFNFCSYQNFR-GRQPNNLENTVLAEVLPPHNDVWPLLHPAPTVETPDQGWRGYTFDSAKNLNIAQ---EEKMRYDRIV 268          
BLAST of NO06G03530 vs. NCBI_GenBank
Match: XP_005784956.1 (hypothetical protein EMIHUDRAFT_230880 [Emiliania huxleyi CCMP1516] >EOD32527.1 hypothetical protein EMIHUDRAFT_230880 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 91.7 bits (226), Expect = 4.900e-15
Identity = 83/297 (27.95%), Postives = 119/297 (40.07%), Query Frame = 0
Query:   11 ILTWNIYFAPHQWATRMQHILAECERLQPDVLCFQEVLPPFMALLQDEEKPTELMISSNNDENASGGRNSWLARNDYICSTLDPKGVVPYGVLTMVKRKHRPHFQSLDLP-SRMGRRLLLTHLESMGRGVEGEEVESKGKLIEEWIIGNVHLESLDSTTLRAEQLRNAGVSLSLKEERINVVLCGDFNFCSERNYDIGDSL-----------------------------------QSLENEVLPLALPSFQDLWPSVKKGTKEEKEGFTFDGTRNTLIRMPRPDPQMRYDRVLWRG 272
            ++TWN++F P +   RM  + +E     PDV+C QEV+P   A +                      R     R  Y  S  D   V  YG L + + +  P F  +    SRMGR LL+  L            +          +   HLESL++  LRA+QLR A  +L+  +   +  L GDFNF S +N+  GD L                                     LEN VL L +  + D WP++    +  + G TFDG  N    +   + +MRYDRV+ RG
Sbjct:   85 VVTWNVWFGPVEAQARMAALFSEALGTTPDVICLQEVVPDLAASI----------------------RGCSALRRAYAISAND---VGSYGCLILARHELSPRFTEVPYQCSRMGRSLLVAEL--------SPPADPAPPAACRVAVATTHLESLNNARLRAKQLRIARDTLASYD---SAALVGDFNFDSSQNF--GDWLPRGDRRTMPPRPERESSDSDSEPRPPWAPPSALRRAELENGVLDLVMGDYIDAWPAL----RPHEAGHTFDGGSNP--HVADVEERMRYDRVMVRG 337          
The following BLAST results are available for this feature:
BLAST of NO06G03530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26348.17.700e-4549.76Endonuclease/exonuclease/phosphatase [Nannochlorop... [more]
XP_004356772.13.300e-2730.86endonuclease/exonuclease/phosphatase family protei... [more]
XP_008613507.13.300e-2732.09hypothetical protein SDRG_09359 [Saprolegnia dicli... [more]
XP_012211057.13.600e-2633.58hypothetical protein SPRG_16340 [Saprolegnia paras... [more]
XP_002670813.12.300e-2533.33predicted protein [Naegleria gruberi] >EFC38069.1 ... [more]
OQS05301.14.000e-2528.83hypothetical protein THRCLA_02551 [Thraustotheca c... [more]
OQR85928.12.000e-2129.43hypothetical protein ACHHYP_11178 [Achlya hypogyna... [more]
OLQ02175.11.100e-1929.65hypothetical protein AK812_SmicGene15011 [Symbiodi... [more]
CUG87878.12.200e-1530.08endonuclease/exonuclease/phosphatase, putative [Bo... [more]
XP_005784956.14.900e-1527.95hypothetical protein EMIHUDRAFT_230880 [Emiliania ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR029ncniR029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03530.1NO06G03530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632084gene_6680Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100268g8gene4180Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03530.1NO06G03530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03530 ID=NO06G03530|Name=NO06G03530|organism=Nannochloropsis oceanica|type=gene|length=3163bp
AGGCACTGGGAGGCGTGACACAACTATCAATAGCCCGTGGACCATCCGTG
ACCGCCGCAGCGGCAATCACCACAGTATAGCGCAGGAGCGAGAAAATTAG
TTGAGGTTCCCACACATGGCCGGTCTCGTTCCAACCGCCTTTTCGATCTT
GACTTGGAACATTTACTTTGCGCCGCATCAATGGGCAACGCGGATGCAAC
ATATTTTAGCCGAGTGTGAGCGATTACAGCCGGACGTGCTGTGCTTTCAA
GAGGTTTTGCCACCCTTTATGGCTTTGTTGCAGGACGAAGAAAAGCCGAC
GGAGTTGATGATCAGCTCCAATAACGACGAAAACGCCAGCGGTGGCCGCA
ACAGCTGGCTGGCACGGAATGACTACATATGTTCAACCCTTGATCCTAAA
GGGGTTGTACCTTACGGCGTGTTGACGATGGTCAAACGCAAGCATCGCCC
CCACTTCCAGAGCCTGGATTTACCAAGCCGCATGGGAAGAAGACTGCTCT
TGACCCACCTTGAAAGTATGGGGCGGGGAGTCGAGGGAGAAGAAGTCGAA
AGTAAAGGAAAACTAATTGAAGAGTGGATCATAGGTAATGTTCACTTGGA
GTCCTTGGATTCCACGACGCTGCGGGCGGAGCAGTTGAGAAATGCCGGTG
TGAGCCTGAGCTTGAAGGAGGAGAGGATAAATGTAGTCCTGTGCGGGGAC
TTTAAgtaagtggggttggtgtgtatttcactcgacaagtcgaaggtggg
tgtgtatatttcattctggtatcaaacaatggaagatgcattctcaggca
ccgacatgccctttcgcctcccccctcctcccgtcctccacttcctttcc
cccgcccagTTTCTGCTCGGAACGCAATTACGACATTGGCGACTCCTTAC
AGAGTCTTGAGAACGAAGTTCTCCCGTTGGCACTACCCTCTTTCCAAGAC
CTATGGCCCTCGGTGAAAAAAGGGACCAAAGAGGAGAAAGAAGGCTTCAC
ATTCGACGGGACGAGAAACACACTCATTCGCATGCCACGACCAGACCCGC
AAATGCGGTACGACAGGGTGTTGTGGAGGGGAACTGGACGGAAAGAGCAG
CAGCAGCAGCAGCAGCAGCAGAAGCTCCAGAAATTCCAGAATCAGGCGCA
AGAGAAATTGAAAGGCTCGATGGCGGAAGTGGCAGGGAGGGGGTGGAGGC
CACGCGATATACGTTTGGTGGGAACTGATCCGGTGAAGGGAGGTCTGTTC
CTCTCCGACCATTTTGGGCTGCTTGCCACGTTTGAAAAAGAGCAATGATG
CCCATATAGAACAGAGGAGAATCTGGAAATATAAGGTGTACACAGCGCAA
AGTAAGTCGAGCACATAGACGTAAAAAAACAATGATTGATGCTGCTGTTT
TTAATTTGCGCATTCATTTTTTCGATAATCTATGCGTGTGGTTGTGGCTG
TGGCGATATTGACGAAGAGGGCGAGGAAAAGGAAGAGGGCGGCGATTGAG
GAATTGTTGTCATCGGTTTTGTGGAAGACAGCAAAGTAGACGGTATTCCT
GGTACTGTAGATTGCTGCTGCTGCCGCTGTTGCTCCTCCTCAACCTTTTC
TCGGAGTGTAGGCTGTGTGAAGAATGCGGAGCTCCACGGACCCACTTCAT
CAACAGGCCGACTTTTAAGGACTGTAATGATGTTACGAGAATGACAATTA
ACATGTATCGAACAGTAACAAATGTGGTTTTTAAACGAAAGGAAAGAGGT
ATGGGAAAACTTATGAGATCATGTACAAAAGTTGCTTTCGCACCCGCTGA
CGTTTCAGGAGGAGGGAGGAGCGTACACTTGCCACAGGTGCTTTGTCATA
ATTGTTCTCTTCGAGCAATTGGAGTGAGTGGAGGTGTGTCCCTCCAGAGC
ACGAGACTTCTACACTAATCTACCGGCATAAACGTACCTTCTGACATATA
AAGTCTCATGATGCTTTTCACCTCGGGATGCCGTCTCATGTAGTCCTCGT
TCTCTGTCCGAAGTTGCGCACGATTTTTAGTTGGATGTACGTCCATGATG
GCGGGGGAGGGAATTGTGGCGTTACTGCTGTTGCTGCTGCTGGGGGTAGT
GGTTGTCGTATCCGTAAAGCAGGATGGGGCAGGCAGTTGGGCTTGGGCTG
GTTGTCCTGCGTCGTTTTGCCGGGTGGTAGAGCCATTCCTGCTGATGCTG
GTGGCCCTAAGTGTGCTCTCACTCATGGCCTGTGTGTACGTATGATTGTC
GAGGCGTTGAGTGAGTAGATTGTAAGTGCGATCGGGGAGAGAGAGGGGGG
AAAGGCAGTACTTCATGAGTGGGGCTTCGCCTATAAGTTGTGAAGCCTGC
TCTGAGTCGGCCTGGAGGAGTCTGTCCCTGAGAGGCTGTTGTGGGCACGT
GCACCGTGCACCTGGAAAACACGTGTAAATCTGTGCATGTGCATACACGG
TGCATATGCGCACGCAAACGCACAAGCGTGGGAAGAGAAAGACCGCGGTT
GGGGGGGGGATGCAGGTGTGAAAGTGGCTGGTAAAAAGGGCTGCGTTGGC
ACGTATTGAATTGGCTCAGAGAAGGCTTCTTCAGGCGTACGACATTCACT
CAGTGCGCAAATCGATAGACTCACTACCCAAATACCAGGAAAGAAACCTG
GACCTAAGCCGGACTTGGTTCTTTATGGCATCCTCGGTGAGGGCTTATTA
TGGCGTGTTTTAAGGAGCAAACCATCCCTGTACCATGCACTCCCACGTGC
AGGGCGCTCAGGACTTACAAGGTTGAATCATCTCGGGGTTGTACGGCCAT
GACACATCTATGCCTGTCCTCGATCATAGGTAGTAGATTGTAGAAGTAAT
ATCTCAACGTATGTCAAAGTTTCAGTTATTCCACTTCGACCTACCCTCTT
TCTAATTTGTGAGAGAAACGGCTTTCAGATCTATCGAGAGTTATTTCGAT
TGATTTTGTCCATGGCCAACGACAAGACCAGTCCGTTTTCACCGTGCTTC
GACCTTGGTTGGCTACACGCGTGATTAACTCTTATTGATCTGCAAGACCA
TAGCTATCCACAAACTCACTTCCCCTTCCCTGAGAGATTCAAAAACAAGT
CTCACGGGTCGTGAGTGGACAGAAATCAAATACTAAACAAACAAACAAAC
AACAAAATCTGTG
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protein sequence of NO06G03530.1

>NO06G03530.1-protein ID=NO06G03530.1-protein|Name=NO06G03530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=343bp
MAGLVPTAFSILTWNIYFAPHQWATRMQHILAECERLQPDVLCFQEVLPP
FMALLQDEEKPTELMISSNNDENASGGRNSWLARNDYICSTLDPKGVVPY
GVLTMVKRKHRPHFQSLDLPSRMGRRLLLTHLESMGRGVEGEEVESKGKL
IEEWIIGNVHLESLDSTTLRAEQLRNAGVSLSLKEERINVVLCGDFNFCS
ERNYDIGDSLQSLENEVLPLALPSFQDLWPSVKKGTKEEKEGFTFDGTRN
TLIRMPRPDPQMRYDRVLWRGTGRKEQQQQQQQQKLQKFQNQAQEKLKGS
MAEVAGRGWRPRDIRLVGTDPVKGGLFLSDHFGLLATFEKEQ*
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Synonyms
Publications