NO06G02540, NO06G02540 (gene) Nannochloropsis oceanica

Overview
NameNO06G02540
Unique NameNO06G02540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1650
Alignment locationchr6:714614..716263 +

Link to JBrowse

Properties
Property NameValue
DescriptionTyrosine aminotransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:714614..716263 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR015424PyrdxlP-dep_Trfase
IPR004839Aminotransferase_I/II
Homology
BLAST of NO06G02540 vs. NCBI_GenBank
Match: EWM26261.1 (tyrosine aminotransferase [Nannochloropsis gaditana])

HSP 1 Score: 623.2 bits (1606), Expect = 7.500e-175
Identity = 334/576 (57.99%), Postives = 395/576 (68.58%), Query Frame = 0
Query:    1 MPPLGD---VKACQASESMARTVAPRITPSSKTSTRVFAEAKSAEEPFPLSPIRGHARSLGGFPXXXXXXXXXXXXTTSIPTTTESPLLP-------WRLKSSRQAARISNPVRNIVDHLKPNPAHPLPCLNFALGDPTAYASQGHLLCPDALVDTVIRHAREGLHNGYTCSAGALDARQALARAFSYEGEGAKRLTADDVIIASGGSGALEIAMAALLNEGDAVLIPRPGFALYRVIAQSLGAVTLPYDLLPEKNWAIDMVALEATIVEYN-----------------------------SSSRGI---IKAILINNPSNPCGNIFSLPNLLALLDVARRYCLPIISDEIYGQVCFPGEAFHPLGTLTRDVPVLTIGGLAKQYAVPGWRVGWVLIQDPLGLLEVVEEGGKEEGNEGGGVSVRQGLKNLTQLILGANTLAQSVIPTLFPSTPSHSLETFHANYVHLLAENARFVQEMLLPVVRKERGREGGPIVGVSLPNRPQGTLYMLLKVDARAFGDLDDDVAFCAALLQEENLVLLPGQCFGVPGYVRLVLTPPQPMLAEGLRRLRDFCGRHA 535
            MPPLG+    KACQA   +     P I    KTS+R F E+KSA+EP  L    G        P              +IP    +  LP       W L SSR+A+R SNP+RNIVDHLKP+P HP P LNFALGDPTAYA++GHL CPD L++ V +H  EGLHNGY CSAG L+ARQALA A+SY G   K LTA+DVIIASGGSGALEI + ALL+EGDAVLIPRPGFALY+V+A+SLGA  +PYDL+PE NWAID+ AL+A I  YN                             S+SR +   IKAIL+NNPSNPCGN+ S  NLL LLDVARR+ LPI++DEIYG++ FPGE FHPLG LT DVPVLT+GG+AKQ+AVPGWRVGW+L+ DPLG L+   E    +  +    S+R+GLKNLTQL+LGANTLAQS IP LF S     LE F+ANYV +L +NA F++  LLPV     G+EG  I GV+L N PQG LY+LLK+    F DL DDVAFCAALL+EENLVLLPGQCFG+PGYVRLVLTPP+P+L EGL RLR FC RHA
Sbjct:    1 MPPLGENARAKACQAPPCLRHPQKPIIPSGCKTSSRAFTESKSADEPTGLQAPAGSIPGAIPPPFASPDFGLHKASIVAIPPQHIASKLPFPYLAPRWELASSRRASRTSNPLRNIVDHLKPDPEHPSPVLNFALGDPTAYATEGHLRCPDVLIEAVAKHVEEGLHNGYACSAGTLEARQALAAAYSYPGR--KLLTAEDVIIASGGSGALEIVLTALLDEGDAVLIPRPGFALYQVLARSLGAEAVPYDLVPEDNWAIDLAALDAAIAGYNNRQTVGNGGGAGLQGDVRGMPGSMRSDGPSTSRTLPARIKAILVNNPSNPCGNVLSKENLLGLLDVARRHSLPIVADEIYGRLVFPGEFFHPLGALTTDVPVLTVGGMAKQFAVPGWRVGWLLLHDPLGALDGPGEEETCDPPQQRRASLRRGLKNLTQLVLGANTLAQSTIPLLFSSKLGPRLEAFYANYVSILVDNANFIKATLLPVAEGREGKEG--IWGVTLSNFPQGALYLLLKLSLDKFIDLPDDVAFCAALLKEENLVLLPGQCFGIPGYVRLVLTPPRPVLVEGLDRLRTFCFRHA 572          
BLAST of NO06G02540 vs. NCBI_GenBank
Match: KOO25386.1 (tyrosine aminotransferase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 347.4 bits (890), Expect = 7.900e-92
Identity = 200/462 (43.29%), Postives = 272/462 (58.87%), Query Frame = 0
Query:   88 WRLKSSRQAARISNPVRNIVDHL---KPNPAHPLPCLNFALGDPTAYASQGHLLCPDALVDTVIRHAREGLHNGYTCSAGALDARQALARAFSYEGEGAKRLTADDVIIASGGSGALEIAMAALLNEGDAVLIPRPGFALYRVIAQSLGAVTLPYDLLPEKNWAIDMVALEATIVEYNSSSRGIIKAILINNPSNPCGNIFSLPNLLALLDVARRYCLPIISDEIYGQVCFPGEAFHPLGTLTRDVPVLTIGGLAKQYAVPGWRVGWVLIQDPLGLLEVVEEGGKEEGNEGGGVSVRQGLKNLTQLILGANTLAQSVIPTLFPSTP----SHSLETFHANYVHLLAENARFVQEMLLPVVRKERGREGGPIVGVSLPNRPQGTLYMLLKVDARAFGDLDDDVAFCAALLQEENLVLLPGQCFGVPGYVRLVLTPPQPMLAEGLRRLRDFCGRHACAEGIPGG 543
            W +  S +A R SNP+R I++ +   K +P    P +  +LGDPTA+   G+L  P+ L +T+I   REG  NGY  S+G   AR A+A+ FS      K    +DVIIASG SGALEIA+  +L+EGD +L+PRPGF LY+V+A+S GA    YDLLPEK W  D+  LEA I           KA++INNPSNPCG++F   +L  LLD+ARR+ LPII+DEIYG++ F G  FHPL  L+ DVP++++GGLAKQ+ VPGWRVGW+L+ DP+G L                 +VR+G   LTQLI GANTL Q  IP +    P    + SL    A+Y+  L ++A F  E L  +    RG +         P  PQG +Y++++ D        +D  F   LL EE + +LPG CFGV  + R+V + P+  LA+   R+  FC RHA +  + GG
Sbjct:   66 WHVPMSIKAQRTSNPIRKIMEKITSQKRDPIPGKPVIPLSLGDPTAF---GNLQAPEVLNETMIALIREGKFNGYGASSGLDAARAAVAKRFSTSTCVYK---PEDVIIASGCSGALEIAINGMLDEGDNLLVPRPGFPLYQVLAESQGASVREYDLLPEKGWQADLEQLEALI-------DARTKALVINNPSNPCGSVFPREHLEGLLDIARRHTLPIIADEIYGEMTFEGHPFHPLAALSEDVPIVSVGGLAKQFLVPGWRVGWILLHDPVGALG----------------AVREGFGRLTQLISGANTLVQGAIPRVLCPKPGSAEAASLAAADAHYMRTLQDSAAFTYERLARI----RGLQ---------PVAPQGAMYVMVQYDPTVLPAFANDAEFVERLLSEEAVFVLPGACFGVEHFFRVVFSGPRSALADAFDRIEAFCNRHAVS--VDGG 483          
BLAST of NO06G02540 vs. NCBI_GenBank
Match: OQR80464.1 (tyrosine aminotransferase [Thraustotheca clavata])

HSP 1 Score: 337.8 bits (865), Expect = 6.300e-89
Identity = 192/455 (42.20%), Postives = 261/455 (57.36%), Query Frame = 0
Query:   85 LLPW-RLKSSRQAARISNPVRNIVDHLKPNPAHPLPCLNFALGDPTAYASQGHLLCPDALVDTVIRHAREGLHNGYTCSAGALDARQALARAFSYEGEGAKRLTADDVIIASGGSGALEIAMAALLNEGDAVLIPRPGFALYRVIAQSLGAVTLPYDLLPEKNWAIDMVALEATIVEYNSSSRGIIKAILINNPSNPCGNIFSLPNLLALLDVARRYCLPIISDEIYGQVCFPGEAFHPLGTLTRDVPVLTIGGLAKQYAVPGWRVGWVLIQDPLGLLEVVEEGGKEEGNEGGGVSVRQGLKNLTQLILGANTLAQSVIPTLFP----STPSHSLETFHANYVHLLAENARFVQEMLLPVVRKERGREGGPIVGVSLPNRPQGTLYMLLKVDARAFGDLDDDVAFCAALLQEENLVLLPGQCFGVPGYVRLVLTPPQPMLAEGLRRLRDFCGRHA 535
            L PW R+  S  A   SNP+R IVD++K         +  +LGDPT +   G+L CPD L +T++++ R   HNGY  SAG   AR A+A+   Y       LT DD+IIASGGSGAL+IA+  LLN GD +L+P+P FALY+VI  +    T  YDLLPE+NW  D+V + + I +         +AIL+NNPSNPCG+++S  +L A+L VA  Y +PII+DEIYG + +    F+P+ +LT  VPV++  GLAK +AVPGWRVGW+ + D   +L                  +R     L+ LILGAN+L QS IP +      S    SL  F   Y  +L  NA+F  E L    RK RG +    V V     PQG +Y++  +D     D+ DD+ F   LL EE++++LPGQCFGV  Y R+V + PQ  L E   R+  FC RH+
Sbjct:   14 LKPWTRMNPSELANNTSNPIRKIVDNIKMPSNANKEIIRLSLGDPTVF---GNLNCPDVLTETIVKNVRSIKHNGYIHSAGTEVARDAIAKC--YGNPVTHPLTRDDIIIASGGSGALDIAITGLLNPGDNLLLPKPAFALYQVICDAHKIETRYYDLLPERNWEADLVQMASLIDDRT-------RAILVNNPSNPCGSVYSKEHLKAILQVAENYRIPIIADEIYGDMTYGDSVFYPMASLTTTVPVISCSGLAKLFAVPGWRVGWIAVHDRNNIL----------------ADIRAAYFKLSTLILGANSLVQSAIPAILTPVKGSAEEKSLAAFKKQYYSILDANAQFTLEKL----RKIRGLK----VVV-----PQGAMYVMCGIDTSILRDVKDDLDFTQKLLDEESVLVLPGQCFGVDNYFRVVFSAPQEKLGEAYDRIASFCQRHS 427          
BLAST of NO06G02540 vs. NCBI_GenBank
Match: XP_008864478.1 (tyrosine aminotransferase [Aphanomyces invadans] >ETW06403.1 tyrosine aminotransferase [Aphanomyces invadans])

HSP 1 Score: 337.0 bits (863), Expect = 1.100e-88
Identity = 189/447 (42.28%), Postives = 261/447 (58.39%), Query Frame = 0
Query:   93 SRQAARISNPVRNIVDHLKPNPAHPL-PCLNFALGDPTAYASQGHLLCPDALVDTVIRHAREGLHNGYTCSAGALDARQALARAFSYEGEGAKRLTADDVIIASGGSGALEIAMAALLNEGDAVLIPRPGFALYRVIAQSLGAVTLPYDLLPEKNWAIDMVALEATIVEYNSSSRGIIKAILINNPSNPCGNIFSLPNLLALLDVARRYCLPIISDEIYGQVCFPGEAFHPLGTLTRDVPVLTIGGLAKQYAVPGWRVGWVLIQDPLGLLEVVEEGGKEEGNEGGGVSVRQGLKNLTQLILGANTLAQSVIPTLFPSTPSH----SLETFHANYVHLLAENARFVQEMLLPVVRKERGREGGPIVGVSLPNRPQGTLYMLLKVDARAFGDLDDDVAFCAALLQEENLVLLPGQCFGVPGYVRLVLTPPQPMLAEGLRRLRDFCGRHA 535
            S  A   SNP+R IVD++K  P +P+ P +  +LGDPT +   G+L CPD L D ++R+A+   HNGY  SAG   AR A+A  +   G     LT DD+IIASGGSGAL+IA+  + N GD +LIPRP F+LY+VIA +       YDLLPEKNW  D+V + + I      SR   +AILINNPSNPCG++FS  +L A+L VA  + +PII+DEIYG + + G  F P+ +LT+ VPV+++ GLAKQ+ VPGWRVGW+ + D   +L+                 +R     L+ ++LGAN+L QS IP +    P      SL  F  +Y   L  NA+F  + L  +          P + V +   PQG +Y++  +D     D+ DD  F   LL EE + +LPGQCF +P + R+V + PQ  LAE   R+R FC RH+
Sbjct:   16 SEFANATSNPIRKIVDNIK-LPQNPVKPIIRLSLGDPTVF---GNLSCPDVLTDAIVRNAKSHNHNGYIHSAGTEAARAAIATRY---GSADAPLTKDDIIIASGGSGALDIAITGMCNPGDNILIPRPAFSLYQVIADAHNIQVRYYDLLPEKNWEADLVGMASQI-----DSR--TQAILINNPSNPCGSVFSKEHLQAILTVAESHRVPIIADEIYGDMTYGGTTFFPIASLTKTVPVVSVSGLAKQFCVPGWRVGWIAVHDRNNILQ----------------DIRTAYFKLSTIVLGANSLVQSAIPDILTPAPGSADEASLAKFKRDYYSTLESNAQFTLDSLKTI----------PGLHVVV---PQGAMYVMCGIDTALLADIADDFDFTQKLLLEEGVFVLPGQCFNIPNFFRVVFSAPQDKLAEAYDRIRVFCQRHS 419          
BLAST of NO06G02540 vs. NCBI_GenBank
Match: XP_005780581.1 (hypothetical protein EMIHUDRAFT_424157 [Emiliania huxleyi CCMP1516] >EOD28152.1 hypothetical protein EMIHUDRAFT_424157 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 335.5 bits (859), Expect = 3.100e-88
Identity = 186/453 (41.06%), Postives = 266/453 (58.72%), Query Frame = 0
Query:   88 WRLKSSRQAARISNPVRNIVDHL---KPNPAHPLPCLNFALGDPTAYASQGHLLCPDALVDTVIRHAREGLHNGYTCSAGALDARQALARAFSYEGEGAKRLTADDVIIASGGSGALEIAMAALLNEGDAVLIPRPGFALYRVIAQSLGAVTLPYDLLPEKNWAIDMVALEATIVEYNSSSRGIIKAILINNPSNPCGNIFSLPNLLALLDVARRYCLPIISDEIYGQVCFPGEAFHPLGTLTRDVPVLTIGGLAKQYAVPGWRVGWVLIQDPLGLLEVVEEGGKEEGNEGGGVSVRQGLKNLTQLILGANTLAQSVIPTLF----PSTPSHSLETFHANYVHLLAENARFVQEMLLPVVRKERGREGGPIVGVSLPNRPQGTLYMLLKVDARAFGDLDDDVAFCAALLQEENLVLLPGQCFGVPGYVRLVLTPPQPMLAEGLRRLRDFCGRH 534
            W +  S +A R +NP+R I++ +   K  P    P +  +LGDPTA+   G+L  P+ L +T++   R   HNGY  SAGA DAR A+A+ FS      K   A D+I+ASG SGALEIA+  +++EGD +L+P+PGF LY+V+A+S GA    YDLLP + W  D+  LE+ +           KA+++NNPSNPCG++F   +LL  +D+A R+ LPII+DEIYG++ F G AFHPL  L   VPV+T+GGLAKQ+ VPGWRVGW+++ DP+  L+                 +R+G   LTQLI+GA+TL Q  +P +      S  + SL     +Y+  L +NARF  E L       +G     +VG++ P  PQG +Y+++  D      +  D  F   LL EE + +LPG CFG P + R+V + P+  LA+   R+  FC RH
Sbjct:   32 WHVAMSVKAQRTANPIRAIMEKITSQKREPIEGKPMIPLSLGDPTAF---GNLQAPEVLSETMVSLVRGAKHNGYGNSAGAEDARAAVAKRFSTPHCIYK---ASDIIVASGCSGALEIAINGIVDEGDNLLVPKPGFPLYQVLAESQGASVKEYDLLPSQGWQADLAQLESLV-------DARTKALIVNNPSNPCGSVFPKEHLLGFIDIAARHKLPIIADEIYGEMAFEGVAFHPLAELAPHVPVITVGGLAKQFLVPGWRVGWLMLHDPVHALD----------------DLREGFNRLTQLIVGASTLVQGAVPRVLCPEAGSADAASLAASDQHYMTTLQDNARFTYERL-------KG-----VVGLT-PVEPQGAMYVMVHYDPAVLPGIRTDAEFVERLLAEEAVFVLPGACFGAPHFFRIVFSGPREKLADAFDRMEAFCMRH 442          
BLAST of NO06G02540 vs. NCBI_GenBank
Match: CEP19568.1 (hypothetical protein [Parasitella parasitica])

HSP 1 Score: 333.2 bits (853), Expect = 1.500e-87
Identity = 183/446 (41.03%), Postives = 259/446 (58.07%), Query Frame = 0
Query:   88 WRLKSSRQAARISNPVRNIVDHLKPNPAHPLPCLNFALGDPTAYASQGHLLCPDALVDTVIRHAREGLHNGYTCSAGALDARQALARAFSYEGEGAKRLTADDVIIASGGSGALEIAMAALLNEGDAVLIPRPGFALYRVIAQSLGAVTLPYDLLPEKNWAIDMVALEATIVEYNSSSRGIIKAILINNPSNPCGNIFSLPNLLALLDVARRYCLPIISDEIYGQVCFPGEAFHPLGTLTRDVPVLTIGGLAKQYAVPGWRVGWVLIQDPLGLLEVVEEGGKEEGNEGGGVSVRQGLKNLTQLILGANTLAQSVIPTLFPSTPSHSLETFHANYVHLLAENARFVQEMLLPVVRKERGREGGPIVGVSLPNRPQGTLYMLLKVDARAFGDLDDDVAFCAALLQEENLVLLPGQCFGVPGYVRLVLTPPQPMLAEGLRRLRDFCGRH 534
            W +K+SR A + +NP+R IVD LK NP    P ++ ++GDPT +   G+     ++ D V++       NGY  + G L AR A+A+A       A  LTA DVI+A+G SGALE+ +  L NEG  +L+PRPGF+LY  +A +    +  YDL+PE NW  D+V +E+ I E  S       AIL+NNPSNPCG+++S  +L A+L VA +Y +PII+DEIY  + F G  F P+ TLT  VP+L++GGLAK++ VPGWRVGW+LI D   +                   +  GL  L Q+ILG N+L Q+ IP +F  TP    E+F  + +  L +N                 RE   I G+ +P  PQG +YM+++++   F D++ DV F A LL EEN+V LPG+CF  P +VR V+TP    L E  +R+ +FC RH
Sbjct:    8 WSVKASRTANQATNPIRAIVDKLKLNPNATKPLISLSIGDPTIF---GNFNVDPSINDAVVKQLNSFKSNGYPPADGTLAARTAVAQA---NNHSAAPLTAHDVILANGCSGALEMCINVLCNEGQNILLPRPGFSLYASVAATRFVESRYYDLVPENNWEADLVHMESLIDEKTS-------AILVNNPSNPCGSVYSRQHLEAILAVAEKYHVPIIADEIYCDLVFKGNEFFPMATLTTTVPILSVGGLAKKWLVPGWRVGWILIHDRNNIF----------------AEINVGLHQLAQIILGPNSLIQAAIPDIFEKTP----ESFFQDTIKQLEKNVELSM------------REVSKIDGM-VPVNPQGAMYMMVRIEVDKFKDIESDVDFSAKLLDEENVVCLPGECFKYPNFVRFVITPTYDRLEEAYKRIDEFCARH 407          
BLAST of NO06G02540 vs. NCBI_GenBank
Match: XP_009835027.1 (tyrosine aminotransferase [Aphanomyces astaci] >ETV75393.1 tyrosine aminotransferase [Aphanomyces astaci])

HSP 1 Score: 330.5 bits (846), Expect = 1.000e-86
Identity = 186/447 (41.61%), Postives = 258/447 (57.72%), Query Frame = 0
Query:   93 SRQAARISNPVRNIVDHLKPNPAHPL-PCLNFALGDPTAYASQGHLLCPDALVDTVIRHAREGLHNGYTCSAGALDARQALARAFSYEGEGAKRLTADDVIIASGGSGALEIAMAALLNEGDAVLIPRPGFALYRVIAQSLGAVTLPYDLLPEKNWAIDMVALEATIVEYNSSSRGIIKAILINNPSNPCGNIFSLPNLLALLDVARRYCLPIISDEIYGQVCFPGEAFHPLGTLTRDVPVLTIGGLAKQYAVPGWRVGWVLIQDPLGLLEVVEEGGKEEGNEGGGVSVRQGLKNLTQLILGANTLAQSVIPTLFPSTP----SHSLETFHANYVHLLAENARFVQEMLLPVVRKERGREGGPIVGVSLPNRPQGTLYMLLKVDARAFGDLDDDVAFCAALLQEENLVLLPGQCFGVPGYVRLVLTPPQPMLAEGLRRLRDFCGRHA 535
            S  A   SNP+R IVD++K  P +P+ P +  +LGDPT +   G+L CPD L D +IR+ +   HNGY  SAG   AR A+A  +   G     LT DDVIIASGGSGAL++A+  + N GD +LIPRP F+LY+VIA +       YDLLPEKNW  D+V + + I      SR   +AI+INNPSNPCG++FS  +L  +L VA  + +PII+DEIYG + + G  F P+ +LT  VPV+++ GLAKQ+ +PGWRVGW+ + D   +L+                 +R     L+ ++LGAN+L QS IP +    P      SL  F   Y   L  NA+F  + L  +          P + V +   PQG +Y++  +D     D+ DD+ F   LL EE + +LPGQCF +P + R+V + PQ  LAE   R+R FC RH+
Sbjct:   15 SELANTTSNPIRKIVDNIK-MPQNPVKPIIRLSLGDPTVF---GNLSCPDVLTDAIIRNVKSHNHNGYIHSAGTEAARAAIAARY---GSVDAPLTKDDVIIASGGSGALDMAITGICNPGDNILIPRPAFSLYQVIADAHNIHVRYYDLLPEKNWEADLVGMASQI-----DSR--TQAIVINNPSNPCGSVFSKEHLRGILKVAETHRVPIIADEIYGDMTYGGTTFFPIASLTTTVPVVSVSGLAKQFCIPGWRVGWIAVHDRHDILK----------------DIRTAYFKLSTIVLGANSLVQSAIPDILTPAPGSEEEKSLAAFKTKYYSTLEANAQFTLDTLQTI----------PGLHVVV---PQGAMYVMCGIDRTLLADIADDLDFTQKLLLEEGVFVLPGQCFNIPNFFRVVFSAPQDKLAEAYERIRVFCQRHS 418          
BLAST of NO06G02540 vs. NCBI_GenBank
Match: ORY97486.1 (putative tyrosine aminotransferase [Syncephalastrum racemosum])

HSP 1 Score: 330.1 bits (845), Expect = 1.300e-86
Identity = 179/451 (39.69%), Postives = 267/451 (59.20%), Query Frame = 0
Query:   83 SPLLPWRLKSSRQAARISNPVRNIVDHLKPNPAHPLPCLNFALGDPTAYASQGHLLCPDALVDTVIRHAREGLHNGYTCSAGALDARQALARAFSYEGEGAKRLTADDVIIASGGSGALEIAMAALLNEGDAVLIPRPGFALYRVIAQSLGAVTLPYDLLPEKNWAIDMVALEATIVEYNSSSRGIIKAILINNPSNPCGNIFSLPNLLALLDVARRYCLPIISDEIYGQVCFPGEAFHPLGTLTRDVPVLTIGGLAKQYAVPGWRVGWVLIQDPLGLLEVVEEGGKEEGNEGGGVSVRQGLKNLTQLILGANTLAQSVIPTLFPSTPSHSLETFHANYVHLLAENARFVQEMLLPVVRKERGREGGPIVGVSLPNRPQGTLYMLLKVDARAFGDLDDDVAFCAALLQEENLVLLPGQCFGVPGYVRLVLTPPQPMLAEGLRRLRDFCGRH 534
            SP   W +K S+ + R  N +R IVD LK +P+     ++ ++GDPT +   G+     ++ D VI+  +   HNGY  + G   AR A+AR FS   + +  L+ADDV++ +G S ALE+ M+AL + G  +L+PRPGF LY  IA      +  YDLLPE+NW  D+  +E+ I E  +       AIL+NNPSNPCG+++S  +L A+L VA ++ +PII+DEIY  + F G  F+P+ +LT DVP+L +GGLAK++ VPGWR+GWVL+ D                +      VR GL NL+Q++LG N++ Q  +  +  STP    ++F+   +  L  NA+   +++            G I G++ P +P G +YM++ +D   F D+ DDV F   LL+EEN++ LPGQCF +P +VR+V+TPP  ML+E   R+ DFC RH
Sbjct:    2 SPRSDWNVKPSKASQRAHNAIRAIVDTLKVDPSAQKSFISLSIGDPTIF---GNFNVDPSINDAVIKQLQSFKHNGYPPAHGTAAARDAVARKFSVPEKAS--LSADDVLLVNGCSSALELCMSALCDPGQNILLPRPGFPLYASIATVREFESRFYDLLPERNWEADLEQMESLIDENTA-------AILVNNPSNPCGSVYSREHLEAILAVASKHKVPIIADEIYCDLVFKGNTFYPMASLTEDVPILAVGGLAKKWLVPGWRMGWVLVHD---------------RHNAFAAGVRTGLLNLSQVLLGPNSIYQGALEDILHSTP----QSFYDQTIEQLQNNAKIGLDVV------------GNIQGLN-PVKPGGAMYMMVGIDTTQFKDIKDDVEFSQKLLKEENVLCLPGQCFEIPNFVRIVITPPAEMLSEAYERMADFCARH 408          
BLAST of NO06G02540 vs. NCBI_GenBank
Match: CEG70824.1 (Putative Tyrosine aminotransferase [Rhizopus microsporus])

HSP 1 Score: 328.2 bits (840), Expect = 5.000e-86
Identity = 179/446 (40.13%), Postives = 260/446 (58.30%), Query Frame = 0
Query:   88 WRLKSSRQAARISNPVRNIVDHLKPNPAHPLPCLNFALGDPTAYASQGHLLCPDALVDTVIRHAREGLHNGYTCSAGALDARQALARAFSYEGEGAKRLTADDVIIASGGSGALEIAMAALLNEGDAVLIPRPGFALYRVIAQSLGAVTLPYDLLPEKNWAIDMVALEATIVEYNSSSRGIIKAILINNPSNPCGNIFSLPNLLALLDVARRYCLPIISDEIYGQVCFPGEAFHPLGTLTRDVPVLTIGGLAKQYAVPGWRVGWVLIQDPLGLLEVVEEGGKEEGNEGGGVSVRQGLKNLTQLILGANTLAQSVIPTLFPSTPSHSLETFHANYVHLLAENARFVQEMLLPVVRKERGREGGPIVGVSLPNRPQGTLYMLLKVDARAFGDLDDDVAFCAALLQEENLVLLPGQCFGVPGYVRLVLTPPQPMLAEGLRRLRDFCGRH 534
            W +K+SR A +  NP+R IVD LK +P    P ++ ++GDPT +   G+     ++ D VI+       NGY  + G LDAR A+A+A ++       LTA DVI+A+G SGALE+ +  L NEG  +L+PRPGF+LY  +A +       Y+L+PEKNW  D+  LE+ I E  S       AIL+NNPSNPCG+++S  +L A+L VA ++ +PII+DEIY  + F G  F+P+ TLT  VP+L++GGLAK++ VPGWRVGW+LI D  G+   + E                GL  L Q+ILG N+L QS +P +   TP+    +F+ + +  +  N     +++            G I G+  P  PQG +YM++ ++   F D++ DV F A LL EEN+V LPG+CF  P +VR V+TP    L E  +R+  FC +H
Sbjct:    8 WNIKASRTANQAHNPIRAIVDKLKVDPNATKPLISLSIGDPTIF---GNFNVDPSINDAVIKQINSYRANGYPPADGTLDARTAVAKAHTHPN---APLTASDVILANGCSGALEMCVNVLCNEGTNILLPRPGFSLYGTLAATRFVEAKYYNLIPEKNWEADLEHLESLIDEKTS-------AILVNNPSNPCGSVYSREHLEAILKVAEKHHVPIIADEIYCDLVFKGNTFYPMATLTSTVPILSVGGLAKKWLVPGWRVGWILIHDRQGVFREIHE----------------GLHQLAQVILGPNSLIQSALPDILEKTPA----SFYESTIQQIQANVDLSMKII------------GRIDGLK-PVTPQGAMYMMVGIEIEKFKDIESDVDFSAKLLAEENVVCLPGECFKYPNFVRFVITPTIDKLEEAYKRIEAFCDKH 407          
BLAST of NO06G02540 vs. NCBI_GenBank
Match: XP_023469213.1 (tyrosine aminotransferase [Rhizopus microsporus ATCC 52813] >ORE00921.1 tyrosine aminotransferase [Rhizopus microsporus var. microsporus] >PHZ15505.1 tyrosine aminotransferase [Rhizopus microsporus ATCC 52813])

HSP 1 Score: 328.2 bits (840), Expect = 5.000e-86
Identity = 179/446 (40.13%), Postives = 260/446 (58.30%), Query Frame = 0
Query:   88 WRLKSSRQAARISNPVRNIVDHLKPNPAHPLPCLNFALGDPTAYASQGHLLCPDALVDTVIRHAREGLHNGYTCSAGALDARQALARAFSYEGEGAKRLTADDVIIASGGSGALEIAMAALLNEGDAVLIPRPGFALYRVIAQSLGAVTLPYDLLPEKNWAIDMVALEATIVEYNSSSRGIIKAILINNPSNPCGNIFSLPNLLALLDVARRYCLPIISDEIYGQVCFPGEAFHPLGTLTRDVPVLTIGGLAKQYAVPGWRVGWVLIQDPLGLLEVVEEGGKEEGNEGGGVSVRQGLKNLTQLILGANTLAQSVIPTLFPSTPSHSLETFHANYVHLLAENARFVQEMLLPVVRKERGREGGPIVGVSLPNRPQGTLYMLLKVDARAFGDLDDDVAFCAALLQEENLVLLPGQCFGVPGYVRLVLTPPQPMLAEGLRRLRDFCGRH 534
            W +K+SR A +  NP+R IVD LK +P    P ++ ++GDPT +   G+     ++ D VI+       NGY  + G LDAR A+A+A ++       LTA DVI+A+G SGALE+ +  L NEG  +L+PRPGF+LY  +A +       Y+L+PEKNW  D+  LE+ I E  S       AIL+NNPSNPCG+++S  +L A+L VA ++ +PII+DEIY  + F G  F+P+ TLT  VP+L++GGLAK++ VPGWRVGW+LI D  G+   + E                GL  L Q+ILG N+L QS +P +   TP+    +F+ + +  +  N     +++            G I G+  P  PQG +YM++ ++   F D++ DV F A LL EEN+V LPG+CF  P +VR V+TP    L E  +R+  FC +H
Sbjct:    8 WNIKASRTANQAHNPIRAIVDKLKVDPNATKPLISLSIGDPTIF---GNFNVDPSINDAVIKQINSYRANGYPPADGTLDARTAVAKAHTHPN---APLTASDVILANGCSGALEMCVNVLCNEGTNILLPRPGFSLYGTLAATRFVEAKYYNLIPEKNWEADLKHLESLIDEKTS-------AILVNNPSNPCGSVYSREHLEAILKVAEKHHVPIIADEIYCDLVFKGNTFYPMATLTSTVPILSVGGLAKKWLVPGWRVGWILIHDRQGVFREIHE----------------GLHQLAQVILGPNSLIQSALPDILEKTPA----SFYESTIQQIQANVDLSMKII------------GRIDGLK-PVTPQGAMYMMVGIEIEKFKDIESDVDFSAKLLAEENVVCLPGECFKYPNFVRFVITPTIDKLEEAYKRIEAFCDKH 407          
The following BLAST results are available for this feature:
BLAST of NO06G02540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26261.17.500e-17557.99tyrosine aminotransferase [Nannochloropsis gaditan... [more]
KOO25386.17.900e-9243.29tyrosine aminotransferase [Chrysochromulina sp. CC... [more]
OQR80464.16.300e-8942.20tyrosine aminotransferase [Thraustotheca clavata][more]
XP_008864478.11.100e-8842.28tyrosine aminotransferase [Aphanomyces invadans] >... [more]
XP_005780581.13.100e-8841.06hypothetical protein EMIHUDRAFT_424157 [Emiliania ... [more]
CEP19568.11.500e-8741.03hypothetical protein [Parasitella parasitica][more]
XP_009835027.11.000e-8641.61tyrosine aminotransferase [Aphanomyces astaci] >ET... [more]
ORY97486.11.300e-8639.69putative tyrosine aminotransferase [Syncephalastru... [more]
CEG70824.15.000e-8640.13Putative Tyrosine aminotransferase [Rhizopus micro... [more]
XP_023469213.15.000e-8640.13tyrosine aminotransferase [Rhizopus microsporus AT... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000206NSK000206Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02540.1NO06G02540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597379gene_6573Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100145g15gene4256Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02540.1NO06G02540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02540 ID=NO06G02540|Name=NO06G02540|organism=Nannochloropsis oceanica|type=gene|length=1650bp
ATGCCGCCCCTCGGGGATGTCAAGGCCTGCCAAGCATCGGAATCCATGGC
AAGGACCGTCGCACCCCGCATCACGCCAAGCTCTAAGACAAGCACCCGGG
TCTTTGCCGAAGCCAAGAGCGCCGAGGAGCCTTTTCCCCTGTCCCCCATC
CGTGGCCATGCCCGAAGCCTAGGCGGATTCCCGCCCTCCTCGTCCTCCTC
CTCCTCGTCCCCATTCCCCACCACCAGCATCCCCACCACCACTGAGAGTC
CCCTATTACCCTGGCGCTTGAAATCTTCACGACAGGCCGCGCGAATCAGT
AACCCCGTCCGCAACATCGTGGACCATCTGAAGCCCAACCCGGCCCATCC
CTTACCGTGCCTTAATTTTGCCTTGGGAGACCCCACTGCCTACGCTAGTC
AGGGGCACTTGCTTTGCCCTGACGCCTTGGTAGATACTGTGATAAGGCAC
GCACGAGAAGGGCTTCATAACGGGTACACATGCTCGGCGGGCGCGTTGGA
TGCCCGCCAAGCGCTGGCCAGGGCCTTTTCATACGAGGGCGAGGGCGCCA
AGCGGTTGACAGCGGACGACGTGATAATTGCGAGTGGGGGATCGGGGGCT
TTGGAGATTGCGATGGCTGCACTGTTGAATGAAGGGGATGCGGTGCTGAT
CCCTCGGCCGGGTTTTGCTCTGTATCGAGTGATTGCACAGAGTTTGGGAG
CGGTGACGTTGCCCTATGATTTGCTGCCGGAGAAGAATTGGGCCATTGAC
ATGGTGGCGCTCGAGGCCACTATTGTGGAGTATAACAGCAGCAGTAGGGG
CATAATCAAAGCGATTTTGATCAACAACCCATCCAACCCCTGCGGCAACA
TATTTTCCTTGCCGAACCTCCTTGCCCTCCTCGATGTAGCCCGTCGGTAC
TGCCTTCCCATCATCTCCGACGAGATTTACGGGCAAGTGTGTTTTCCCGG
GGAGGCATTTCATCCTCTAGGAACACTTACGCGGGATGTCCCCGTTTTGA
CCATAGGGGGGCTGGCGAAGCAGTATGCGGTTCCCGGATGGAGGGTCGGA
TGGGTGCTGATACAAGACCCGTTGGGTTTGCTGGAAGTGGTGGAGGAGGG
AGGGAAGGAAGAAGGCAATGAGGGAGGGGGGGTCAGTGTAAGGCAGGGCC
TGAAGAACCTGACACAGCTGATTTTGGGAGCCAATACACTGGCTCAATCT
GTCATCCCTACTCTGTTTCCCTCCACCCCCTCCCATTCCCTCGAGACGTT
TCATGCCAATTACGTGCACCTCTTGGCAGAAAATGCCCGCTTCGTCCAGG
AAATGTTGTTGCCTGTGGTTAGAAAAGAGAGAGGGAGGGAGGGCGGACCT
ATTGTCGGGGTATCTTTGCCCAACCGCCCCCAAGGGACCCTGTACATGTT
GTTGAAAGTGGATGCGAGAGCCTTTGGAGACTTGGATGACGATGTGGCTT
TTTGCGCGGCCTTGCTGCAGGAGGAGAATCTTGTTTTGTTGCCGGGTCAG
TGCTTTGGAGTGCCGGGATATGTGAGGTTGGTCTTGACGCCGCCGCAGCC
GATGCTGGCGGAGGGATTGCGCCGGCTGCGTGACTTTTGTGGGCGACATG
CGTGTGCTGAAGGAATTCCGGGAGGGGAAGGGGAGGGTGCGGTGGTGTGA
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protein sequence of NO06G02540.1

>NO06G02540.1-protein ID=NO06G02540.1-protein|Name=NO06G02540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=550bp
MPPLGDVKACQASESMARTVAPRITPSSKTSTRVFAEAKSAEEPFPLSPI
RGHARSLGGFPPSSSSSSSSPFPTTSIPTTTESPLLPWRLKSSRQAARIS
NPVRNIVDHLKPNPAHPLPCLNFALGDPTAYASQGHLLCPDALVDTVIRH
AREGLHNGYTCSAGALDARQALARAFSYEGEGAKRLTADDVIIASGGSGA
LEIAMAALLNEGDAVLIPRPGFALYRVIAQSLGAVTLPYDLLPEKNWAID
MVALEATIVEYNSSSRGIIKAILINNPSNPCGNIFSLPNLLALLDVARRY
CLPIISDEIYGQVCFPGEAFHPLGTLTRDVPVLTIGGLAKQYAVPGWRVG
WVLIQDPLGLLEVVEEGGKEEGNEGGGVSVRQGLKNLTQLILGANTLAQS
VIPTLFPSTPSHSLETFHANYVHLLAENARFVQEMLLPVVRKERGREGGP
IVGVSLPNRPQGTLYMLLKVDARAFGDLDDDVAFCAALLQEENLVLLPGQ
CFGVPGYVRLVLTPPQPMLAEGLRRLRDFCGRHACAEGIPGGEGEGAVV*
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Synonyms
Publications