NO06G02490, NO06G02490 (gene) Nannochloropsis oceanica

Overview
NameNO06G02490
Unique NameNO06G02490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length999
Alignment locationchr6:700948..701946 -

Link to JBrowse

Properties
Property NameValue
DescriptionPre-miRNA 5'-monophosphate methyltransferase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:700948..701946 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR024160BIN3_SAM-bd_dom
IPR010675Bin3
Vocabulary: Biological Process
TermDefinition
GO:0032259methylation
Homology
BLAST of NO06G02490 vs. NCBI_GenBank
Match: XP_005855297.1 (putative methyltransferase bcdin3d-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU21062.1 putative methyltransferase bcdin3d-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 245.0 bits (624), Expect = 3.400e-61
Identity = 143/309 (46.28%), Postives = 186/309 (60.19%), Query Frame = 0
Query:   32 RYARALHNGHLRGNFQDYYAFHPVAPRITALLGASGT---PASTLKQDIKGALQHILHCAKQGDS----NEPLLIADWGCNSGDLTAALCRRLRELQPDRRVVGLGLDLDANLITRATSKYSDIEEGVG----VTFAAVDLVSDWSRAEKLMRAFL-------------KEHHTDGIGRQKEAEQKGRVPTRKFDILTIFSTTMWIHLVHGEEALKDFLVHASEWTYCLVVEPQTHKNYKTARRRLKRVGLQPCQHFNAMADSEYPRMLMTCADRGLVREFEGSMNMGKSSDWGRELHIFWKREEGKEE 317
            +Y+ A+  GH  GNF  YY+FHP   R+ ALLG   T    A   +   + AL  IL   K GD+     + LLIADWGCN+G LT  LCRRLR L   R V GLGLD D NLI RA  +  + E+  G    V+FAAVDLV+DW+RAE++MRAFL             +  H+  +      E+  +  T KFD+LTIFSTTMWIHLVHGE AL+ FL  A+EWT+CLV+EPQT K+YK AR+RLKR G  P  +F  +  ++   M+M   D      F  ++N+G SS WGREL ++++ E  +EE
Sbjct:    2 KYSIAVQGGHFNGNFPHYYSFHPFESRVAALLGIPSTCDRLALGKQNKNEAALAGIL---KYGDNKNGGRKRLLIADWGCNTGRLTRELCRRLRNLS-HRPVAGLGLDFDENLINRAKEESVEEEKIEGECGDVSFAAVDLVTDWARAEEIMRAFLDKDGDLGGNDDDSRPRHSRPLESVDGREETRQGRTIKFDLLTIFSTTMWIHLVHGENALETFLRRAAEWTHCLVLEPQTQKSYKAARKRLKRAGFDPAVYFQPVTVADTSAMVMR-EDGKREWGFTKAINLGASSAWGRELFVYYREERHEEE 305          
BLAST of NO06G02490 vs. NCBI_GenBank
Match: EWM26264.1 (putative methyltransferase bcdin3d [Nannochloropsis gaditana])

HSP 1 Score: 242.3 bits (617), Expect = 2.200e-60
Identity = 146/327 (44.65%), Postives = 192/327 (58.72%), Query Frame = 0
Query:    9 APAGALEPSKDNDSKLITSITNSRYARALHNGHLRGNFQDYYAFHPVAPRITALLGASGT---PASTLKQDIKGALQHILHCAKQGDS----NEPLLIADWGCNSGDLTAALCRRLRELQPDRRVVGLGLDLDANLITRATSKYSDIEEGVG----VTFAAVDLVSDWSRAEKLMRAFL-------------KEHHTDGIGRQKEAEQKGRVPTRKFDILTIFSTTMWIHLVHGEEALKDFLVHASEWTYCLVVEPQTHKNYKTARRRLKRVGLQPCQHFNAMADSEYPRMLMTCADRGLVREFEGSMNMGKSSDWGRELHIFWKRE 312
            +P+ A   SK +      S +  +Y+ A+  GH  GNF  YY+FHP   R+ ALLG   T    A   +   + AL  IL   K GD+     + LLIADWGCN+G LT  LCRRLR L   R V GLGLD D NLI RA  +  + E+  G    V+FAAVDLV+DW+RAE++MRAFL             +  H+  +      E+  +  T KFD+LTIFSTTMWIHLVHGE AL+ FL  A+EWT+CLV+EPQT K+YK AR+RLKR G  P  +F  +  ++   M+M   D      F  ++N+G SS WGREL ++++ E
Sbjct:    4 SPSLAHGDSKADTGSERLSSSIPKYSIAVQGGHFNGNFPHYYSFHPFESRVAALLGIPSTCDRLALGKQNKNEAALAGIL---KYGDNKNGGRKRLLIADWGCNTGRLTRELCRRLRNLS-HRPVAGLGLDFDENLINRAKEESVEEEKIEGECGDVSFAAVDLVTDWARAEEIMRAFLDKDGDLGGNDDDSRPRHSRPLESVDGREETRQGRTIKFDLLTIFSTTMWIHLVHGENALETFLRRAAEWTHCLVLEPQTQKSYKAARKRLKRAGFDPAVYFQPVTVADTSAMVMR-EDGKREWGFTKAINLGASSAWGRELFVYYREE 325          
BLAST of NO06G02490 vs. NCBI_GenBank
Match: CEO98771.1 (hypothetical protein PBRA_006885 [Plasmodiophora brassicae])

HSP 1 Score: 121.7 bits (304), Expect = 4.300e-24
Identity = 89/272 (32.72%), Postives = 130/272 (47.79%), Query Frame = 0
Query:   40 GHLRGNFQDYYAFHPVAPRITALLGASGTPASTLKQDIKGALQHILHCAKQGDSNEPLLIADWGCNSGDLTAALCRRLRELQPDRRVVGLGLDLDANLITRATSKYSDIEEGVGVTFAAVDLVSDWSRAEKLMRAFLKEHHTDGIGRQKEAEQKGRVPTRKFDILTIFSTTMWIHLVHGEEALKDFLVHASEWTYCLVVEPQTHKNYKTARRRLKRVGL-QPCQHFNAMADSEYPRMLMTCADRGLVREFEGSMNMGKSSDWGRELHIFWKR 311
            GHL GNF+ YYAFHP A R   L G              GA    L C        P+++AD GCNSGDL+  + R          ++   +DLD +L+ RA   +++      V F A D+ S   RA  ++ AFL++H              GRV   +FD+L +FS TMWIH+  G++AL DFL + +     +VVEPQT K+Y+  R R +R  L QP Q  +     +    L+   D  L        ++   ++WGR +  + +R
Sbjct:    9 GHLFGNFRKYYAFHPPAERTRLLEG-------------NGAYNAFLSCRA-----PPMVLADLGCNSGDLSVEVWRHAGRFVAPCHMI--AVDLDPDLVDRAAEAHANEH----VRFVAADVCSPDCRA--ILDAFLRDH--------------GRV---RFDVLCLFSMTMWIHMTFGDDALVDFLRYCTTIADGIVVEPQTWKSYQACRERCRRRKLPQPAQLASIRLRQD---ALLAAIDAVLTENDAFVGHVVGVTNWGRTITFYARR 234          
BLAST of NO06G02490 vs. NCBI_GenBank
Match: XP_015906366.1 (pre-miRNA 5'-monophosphate methyltransferase-like [Parasteatoda tepidariorum])

HSP 1 Score: 115.9 bits (289), Expect = 2.300e-22
Identity = 92/299 (30.77%), Postives = 147/299 (49.16%), Query Frame = 0
Query:   14 LEPSKDNDSKLITSITNSRYARALHNGHLR-GNFQDYYAFHPVAPRITALLGASGTPASTLKQDIKGALQHILHCAKQGDSNEPLLIADWGCNSGDLTAALCRRLRELQPDRRVVGLGLDLDANLITRATSKYSDIEEGVGVTFAAVDLVSDWSRAEKLMRAFLKEHHTDGIGRQKEAEQKGRVPTRKFDILTIFSTTMWIHLVHGEEALKDFLVHASEWTYCLVVEPQTHKNYKTARRRLKRVGLQ--PCQHFNAMADSEYPRMLMTCADRGLVREFEGSMNMGKSSDWGRELHIFWK 310
            +E + +N+ K+I+S  N         G  R GNF +YY F+ V+ R+ AL        S L  +IK               +EP++  D GCNSGDLT AL   L    P+R++  LG+D+D  LITR        +    +T+  +D++++   A + ++++L+ H        K++E         FDI+T FSTTMWIHL +G++ L  FL   S  +  L++EPQ  K Y++A RR+ R+  +    Q       SE+    ++      ++E  G       + WGR+L+ F K
Sbjct:    1 MESNSNNEVKIISSNCNE-----FEPGAARFGNFINYYTFNSVSKRLQAL-------PSDLPSNIK-------------VDHEPIVCLDIGCNSGDLTVALYSHLATSYPNRQIYMLGIDIDNVLITRCNESN---KNEANITYEQIDIMNE--NALQKLKSYLELH--------KKSE---------FDIVTCFSTTMWIHLNNGDDGLNYFLRIVSNLSKHLLIEPQEWKCYRSAVRRMTRLHREKFDVQLLKIRNISEHLIQFLSTHCDMYLKECLG------ETSWGRKLYFFKK 246          
BLAST of NO06G02490 vs. NCBI_GenBank
Match: KZS21489.1 (putative Protein RNA methyltransferase [Daphnia magna])

HSP 1 Score: 114.0 bits (284), Expect = 8.900e-22
Identity = 74/224 (33.04%), Postives = 110/224 (49.11%), Query Frame = 0
Query:   44 GNFQDYYAFHPVAPRITALLGASGTPASTLKQDIKGALQHILHCAKQGDSNEPLLIADWGCNSGDLTAALCRRLRELQPDRRVVGLGLDLDANLITRATSKYSDIEEGVGVTFAAVDLVSDWSRAEKLMRAFLKEHHTDGIGRQKEAEQKGRVPTRKFDILTIFSTTMWIHLVHGEEALKDFLVHASEWTYCLVVEPQTHKNYKTARRRLKRVGLQPCQHFNAM 268
            GNF +YY F+P   R+    G                        +   S++PLL  D GCN+G+LT  L + L   Q D R+  +G+DLDA L+ RA    S+  E   + F  V++V++    ++L+  +L+ H            + GR   ++FDI   FSTTMW+HL HG+  L+  L   + W   +VVEPQ  K Y+ A RRL+R    P   F+A+
Sbjct:   18 GNFINYYDFNPPQNRLALFEG---------------------KFCEYFSSHQPLLCLDVGCNTGELTKGLYKMLSSGQSDVRM--MGVDLDAQLVQRANEAISNELES-KLQFQTVNVVAEAEERDQLLSRYLETH------------ESGR---KRFDIAFCFSTTMWVHLNHGDAGLESLLACLATWADNVVVEPQPWKCYRNATRRLRRTNRPPFPLFDAL 202          
BLAST of NO06G02490 vs. NCBI_GenBank
Match: XP_009020009.1 (hypothetical protein HELRODRAFT_155848 [Helobdella robusta] >ESO02601.1 hypothetical protein HELRODRAFT_155848 [Helobdella robusta])

HSP 1 Score: 112.8 bits (281), Expect = 2.000e-21
Identity = 80/276 (28.99%), Postives = 137/276 (49.64%), Query Frame = 0
Query:   44 GNFQDYYAFHPVAPRITALLGASGTPASTLKQDIKGALQHILHCAKQGDSNEPLLIADWGCNSGDLTAALCRRLRE---LQPDRRVVG----LGLDLDANLITRATSKYSDIEEGVGVTFAAVDLVSDWSRAEKLMRAFLKEHHTDGIGRQKEAEQKGRVPTRKFDILTIFSTTMWIHLVHGEEALKDFLVHASEWTYCLVVEPQTHKNYKTARRRLKRVGLQPCQHFNAM-----ADSEYPRMLMTCADRGLVREFEGSMNMGKSSDWGRELHIF 308
            GNF +YY+F+P + R+  +      P   L Q      +       +    +  L+ D GCNSG+LT  L  +  E    +P+   +     LG+D+D  LI R+     + E+   ++F   D++S+  R+  ++ +FLKE++                 + +FDI  +FS TMWIHL +G++ LK+FL++  + + C+++EPQT KNYK+A RR+KR   +P +HF ++       +E    L       L+++F         + W R L +F
Sbjct:   10 GNFINYYSFNPPSERLKFI------PKDLLIQVCWENCEARQEYKYEDSGRKVFLLLDVGCNSGELTRNLFNQFSEDPNAKPNSHSLFTMKILGIDIDPVLIERSEECNQNSEK---LSFKMADIMSEKDRS-TVLESFLKENY-----------------SLQFDISFLFSITMWIHLNNGDDGLKNFLLYICQISKCILLEPQTWKNYKSAVRRMKRSKSEPFKHFPSLKWRENVVNEICEFLTESCSMNLIKKF-------GETGWDRSLLLF 251          
BLAST of NO06G02490 vs. NCBI_GenBank
Match: PRD32468.1 (bcdin3d [Nephila clavipes])

HSP 1 Score: 112.1 bits (279), Expect = 3.400e-21
Identity = 78/265 (29.43%), Postives = 128/265 (48.30%), Query Frame = 0
Query:   44 GNFQDYYAFHPVAPRITALLGASGTPASTLKQDIKGALQHILHCAKQGDSNEPLLIADWGCNSGDLTAALCRRL-RELQPDRRVVGLGLDLDANLITRATSKYSDIEEGVGVTFAAVDLVSDWSRAEKLMRAFLKEHHTDGIGRQKEAEQKGRVPTRKFDILTIFSTTMWIHLVHGEEALKDFLVHASEWTYCLVVEPQTHKNYKTARRRLKRVGLQPCQHFNAMADSEYPRMLMTCADRGLVREFEGSMNMGKSSDWGRELHIF 308
            GNF +YY F+ V+ R+ A+                    ++LH  K      P++  D GCNSG+LT  L   L  EL  +     LG+DLD NLITR+     +I+    + +  +D++ D S ++  +++FL+ ++                   KFD++T FSTTMWIHL HG++ L  FL   S+    L++EPQ  K+YK+A RR+ R+  +   +   +   +    L     +   + F+ S+     + WGR + +F
Sbjct:   25 GNFINYYTFNSVSKRLQAI------------------PPNLLHFKK-----SPIVCLDIGCNSGELTTGLYSHLTSELGSNIDAFILGIDLDNNLITRSRESNKNIDH---IIYEKMDIMEDSSVSQ--LQSFLQRYN-----------------KTKFDLITCFSTTMWIHLHHGDDGLNKFLSRISKLATLLLIEPQEWKSYKSAVRRMTRLN-REVFNLEKLKIRDITHHLSQFFPKECYKHFDKSLG---ETSWGRNMFLF 240          
BLAST of NO06G02490 vs. NCBI_GenBank
Match: XP_022112462.1 (pre-miRNA 5'-monophosphate methyltransferase isoform X1 [Pieris rapae])

HSP 1 Score: 109.0 bits (271), Expect = 2.900e-20
Identity = 70/224 (31.25%), Postives = 110/224 (49.11%), Query Frame = 0
Query:   44 GNFQDYYAFHPVAPRITALLGASGTPASTLKQDIKGALQHILHCAKQGDSNEPLLIADWGCNSGDLTAALCRRLRELQPDRRVVGLGLDLDANLITRATSKYSDIEEGVGVTFAAVDLVSDWSRAEKLMRAFLKEHHTDGIGRQKEAEQKGRVPTRKFDILTIFSTTMWIHLVHGEEALKDFLVHASEWTYCLVVEPQTHKNYKTARRRLKRVGLQPCQHFNAM 268
            GNF +YY+FH V  R+             L  D+   LQ          +  P+LI D GCN+G+LT  L R L  L P+  V  L LD+D  LI RA+ +  +I       F + ++++D    +K++  +L++ +                  + FDI   FS TMWIH+ +G++   +FL      + C+++EPQ  K YK A+RR+KR G    + FN++
Sbjct:   23 GNFINYYSFHSVNERL-----------QNLHHDMFPILQ----------NTSPILIMDIGCNTGELTIQLYRYLESLYPNTEVHILALDIDPILIERASREIKNI------IFVSCNIIAD--SGKKIITEYLQKFN-----------------KKSFDITFCFSVTMWIHINNGDDKFIEFLSFLKTSSKCIIIEPQPWKCYKNAQRRMKRAGAGDFELFNSL 200          
BLAST of NO06G02490 vs. NCBI_GenBank
Match: KFM72901.1 (putative methyltransferase BCDIN3D, partial [Stegodyphus mimosarum])

HSP 1 Score: 107.5 bits (267), Expect = 8.400e-20
Identity = 93/290 (32.07%), Postives = 142/290 (48.97%), Query Frame = 0
Query:   30 NSRYARALHNGHLR-GNFQDYYAFHPVAPRITALLGASGTPASTLKQDIKGALQHILHCAKQGDSNEPLLIADWGCNSGDLTAALCRRLRELQPDRRVVGLGLDLDANLITRA--TSKYSDIEEGVGVTFAAVDLVSDWSRAEKLMRAFLKEHHTDGIGRQKEAEQKGRVPTRKFDILTIFSTTMWIHLVHGEEALKDFLVHASEWTYCLVVEPQTHKNYKTARRRLKRVGLQPCQHFNAMADSEYPRMLMTCADRGLVREF-EGSMNM------GKSSDWGRELHIFWK 310
            NS+ +     G  R GNF +YY+F+ V+ R+ A+      P+  L Q     LQ  +H         P++  D GCNSGDLT  L   L       ++  LG+DLD  LITR   +++Y +      VT+  +D++   S A+  + AFL++++                   +FD++T FSTTMWIHL +G+  L +FL   S  T  L++EPQ  K YK A RR+ R+  +      A A  +     +T    G + +F +   NM      G++S WGR L++F K
Sbjct:    6 NSQNSEKFEPGAARFGNFINYYSFNSVSKRLEAI------PSDLLSQ-----LQLNIH---------PVVCLDIGCNSGDLTVGLYSHLTSNIDGTKMHVLGIDLDDVLITRCNESNQYPEF-----VTYQQIDIMDANSTAQ--LTAFLEKYN-----------------RTEFDLITCFSTTMWIHLNYGDSGLNNFLKTVSNITKFLLLEPQEWKCYKAAVRRMTRLNRE------AFAIKKLQVKEIT----GHITKFLQSECNMKFHACFGETS-WGRSLYLFQK 240          
BLAST of NO06G02490 vs. NCBI_GenBank
Match: XP_013759230.1 (BIN3 domain-containing protein 2 [Thecamonas trahens ATCC 50062] >KNC47752.1 BIN3 domain-containing protein 2 [Thecamonas trahens ATCC 50062])

HSP 1 Score: 107.1 bits (266), Expect = 1.100e-19
Identity = 75/238 (31.51%), Postives = 106/238 (44.54%), Query Frame = 0
Query:   40 GHLRGNFQDYY--AFHPVAPRITALLGASGTPASTLKQDIKGALQHILHCAKQGDSNEPLLIADWGCNSGDLTAALCRRLRELQPDRRVVGLGLDLDANLITRA----TSKYSDIEEGVGVTFAAVDLVSDWSRAEKLMRAFLKEHHTDGIGRQKEAEQKGRVPT----RKFDILTIFSTTMWIHLVHGEEALKDFLVHASEWTYCLVVEPQTHKNYKTARRRLKRVGLQPCQHFNAM 268
            GH  GNF  YY   F+P + R+  +  A G                +L     GD   PL + D GCN+GDLT A+  R+ E    R V  +G+D+DA+L+ RA      +  D   G+   F A D+++                  DG+     A + G VPT      FD++  F   MWIH+  G++ L+ FL         LV+E  T  NY+  R RL+R GL P   + AM
Sbjct:   16 GHFFGNFPRYYDAQFNPPSKRLPFVPRAVG----------------VLVAEAAGDGERPLYMLDLGCNAGDLTVAVAERVAE-SSGRAVHAVGIDVDASLVARAETLVAGRNGDAAAGLSFAFLAGDILA------------------DGVEDTLLAARGGEVPTDGASPPFDVVFCFGLVMWIHVNAGDDGLRAFLAKLGSLGATLVLETHTWDNYRKCRSRLRRKGLPPPAAYAAM 218          
The following BLAST results are available for this feature:
BLAST of NO06G02490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855297.13.400e-6146.28putative methyltransferase bcdin3d-like protein, p... [more]
EWM26264.12.200e-6044.65putative methyltransferase bcdin3d [Nannochloropsi... [more]
CEO98771.14.300e-2432.72hypothetical protein PBRA_006885 [Plasmodiophora b... [more]
XP_015906366.12.300e-2230.77pre-miRNA 5'-monophosphate methyltransferase-like ... [more]
KZS21489.18.900e-2233.04putative Protein RNA methyltransferase [Daphnia ma... [more]
XP_009020009.12.000e-2128.99hypothetical protein HELRODRAFT_155848 [Helobdella... [more]
PRD32468.13.400e-2129.43bcdin3d [Nephila clavipes][more]
XP_022112462.12.900e-2031.25pre-miRNA 5'-monophosphate methyltransferase isofo... [more]
KFM72901.18.400e-2032.07putative methyltransferase BCDIN3D, partial [Stego... [more]
XP_013759230.11.100e-1931.51BIN3 domain-containing protein 2 [Thecamonas trahe... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000211NSK000211Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02490.1NO06G02490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597365gene_6567Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100145g8gene4261Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02490.1NO06G02490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02490 ID=NO06G02490|Name=NO06G02490|organism=Nannochloropsis oceanica|type=gene|length=999bp
ATGGCCTCTCCCGCCCAACCACCAGCACCAGCAGGAGCTCTAGAACCGTC
CAAAGACAACGACAGCAAGCTTATAACCTCTATCACCAACTCACGCTACG
CCCGAGCACTGCACAACGGGCATCTAAGAGGCAATTTTCAAGACTACTAT
GCCTTCCATCCTGTCGCGCCGAGAATCACTGCCTTGCTGGGCGCGTCTGG
GACGCCTGCCAGTACACTTAAGCAGGACATCAAGGGGGCATTACAACACA
TACTTCACTGTGCAAAACAGGGGGACAGTAATGAGCCCTTGCTGATCGCA
GATTGGGGGTGTAATTCAGGTGACTTGACGGCAGCCTTGTGCCGACGTCT
CCGTGAGCTTCAACCAGACCGGCGGGTGGTGGGGTTGGGACTGGACTTGG
ATGCGAATCTTATAACGCGGGCCACTAGCAAGTACAGTGACATTGAAGAA
GGGGTAGGTGTGACCTTTGCAGCTGTGGATTTGGTATCGGATTGGTCACG
GGCTGAGAAACTCATGCGGGCGTTCCTGAAGGAGCACCACACAGATGGTA
TCGGCCGCCAGAAAGAAGCAGAGCAAAAAGGACGTGTACCGACAAGAAAG
TTCGATATATTGACCATCTTTTCGACCACCATGTGGATTCATCTTGTCCA
TGGTGAGGAGGCCTTGAAAGACTTTTTGGTGCACGCCTCAGAATGGACAT
ATTGCCTTGTCGTCGAGCCACAGACTCACAAAAATTATAAAACTGCCCGA
AGACGTCTCAAACGGGTGGGACTGCAGCCGTGTCAGCATTTTAACGCTAT
GGCTGATTCGGAATACCCGCGCATGTTAATGACGTGTGCAGACAGAGGGC
TCGTGAGGGAGTTTGAAGGTTCGATGAACATGGGCAAGTCTAGTGATTGG
GGGAGGGAGCTGCACATTTTTTGGAAGAGGGAAGAGGGAAAGGAGGAAAA
TTATGAGGGAGGGGACAAAATGCGAAATAAATTGAGCAAAAAACGATAG
back to top

protein sequence of NO06G02490.1

>NO06G02490.1-protein ID=NO06G02490.1-protein|Name=NO06G02490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bp
MASPAQPPAPAGALEPSKDNDSKLITSITNSRYARALHNGHLRGNFQDYY
AFHPVAPRITALLGASGTPASTLKQDIKGALQHILHCAKQGDSNEPLLIA
DWGCNSGDLTAALCRRLRELQPDRRVVGLGLDLDANLITRATSKYSDIEE
GVGVTFAAVDLVSDWSRAEKLMRAFLKEHHTDGIGRQKEAEQKGRVPTRK
FDILTIFSTTMWIHLVHGEEALKDFLVHASEWTYCLVVEPQTHKNYKTAR
RRLKRVGLQPCQHFNAMADSEYPRMLMTCADRGLVREFEGSMNMGKSSDW
GRELHIFWKREEGKEENYEGGDKMRNKLSKKR*
back to top
Synonyms
Publications