NO06G02060, NO06G02060 (gene) Nannochloropsis oceanica

Overview
NameNO06G02060
Unique NameNO06G02060
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1536
Alignment locationchr6:604719..606254 +

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Properties
Property NameValue
DescriptionProteasome alpha5 isoform a
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:604719..606254 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
GO:0016020membrane
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029055Ntn_hydrolases_N
IPR001353Proteasome_sua/b
Homology
BLAST of NO06G02060 vs. NCBI_GenBank
Match: EWM26245.1 (proteasome alpha5 isoform a [Nannochloropsis gaditana])

HSP 1 Score: 417.5 bits (1072), Expect = 4.400e-113
Identity = 208/317 (65.62%), Postives = 248/317 (78.23%), Query Frame = 0
Query:   10 TGPPCCVFLLVALLTICLISPLPTVHAAVEGASTGGRRVVEVYHPFPFTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVVGPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKD---------GVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPS 318
            T PPC +  +V L    L++ +  VHAA+E  + GGRR+VEVYHPFP+TPEGLIRQLTHAQQAVNKGSL++AL AKDGVVL+G RR+LSPL+VGPTPKIG++ QH+AYVMAGLVPDGRY+VRRGR L+Q+HWF YGEEVGLP LLM+LSKV+TSAHYR P EG  G  KG   +SFFEEIR +PSVDPIGDAEAE++KEGLPAR+FGVGFLFAGP     AP  ++ +  G         D           YPPW VYEMGPSGLFVRWSARAIGE G++AEALLE+RYRP ++LE C+RLA+ +CD+V+  SS S
Sbjct:   49 TNPPCLLLAIVVL----LLNFVCAVHAALESGNNGGRRLVEVYHPFPYTPEGLIRQLTHAQQAVNKGSLAMALVAKDGVVLVGSRRNLSPLLVGPTPKIGQMDQHIAYVMAGLVPDGRYVVRRGRLLSQQHWFVYGEEVGLPGLLMDLSKVLTSAHYRLPPEGPLGEKKG---ASFFEEIRPKPSVDPIGDAEAELKKEGLPARYFGVGFLFAGPLTASRAPTPVDEMNGGDNPASSADVDTTRPTEEASSTYPPWAVYEMGPSGLFVRWSARAIGERGDRAEALLESRYRPGLTLEECQRLAIHICDSVMEDSSSS 358          
BLAST of NO06G02060 vs. NCBI_GenBank
Match: XP_014767927.1 (PREDICTED: proteasome subunit alpha type-5-like [Octopus bimaculoides] >KOF94795.1 hypothetical protein OCBIM_22000646mg [Octopus bimaculoides])

HSP 1 Score: 110.2 bits (274), Expect = 1.500e-20
Identity = 80/296 (27.03%), Postives = 130/296 (43.92%), Query Frame = 0
Query:   57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVVGPT-PKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLK 352
            F+PEG + Q+ +A +A+  GS +I +   DG+VL  E+R   PL+V  +  K+  +  H+   M+GLV D R ++ R R  AQ HWF Y E++ + ++   +S +  +                                   GD +A+    G  +R FGV  LFAG  ++ + P L                         + M PSG F+++ A+AIG G E A+  L+  Y   MSL+  ++ A+++   V+     S                N+EMA +TR+ N + F K
Sbjct:   15 FSPEGRLFQVEYAIEAIKLGSTAIGIQTNDGIVLAVEKRVTCPLIVASSIEKVLEIDSHIGCAMSGLVADSRTMIDRARVEAQNHWFTYNEKMSVESVTQAVSNLALA----------------------------------FGDDDAD---PGAMSRPFGVALLFAG--IDEKGPQL-------------------------FHMDPSGTFIQYDAKAIGSGSEGAQQALQDVYHKSMSLDNARKEALKILQQVMEEKLDST---------------NVEMATVTREKNFQMFSK 231          
BLAST of NO06G02060 vs. NCBI_GenBank
Match: KXJ11829.1 (Proteasome subunit alpha type-5 [Exaiptasia pallida])

HSP 1 Score: 104.4 bits (259), Expect = 8.200e-19
Identity = 76/307 (24.76%), Postives = 130/307 (42.35%), Query Frame = 0
Query:   57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLV-VGPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQLR 363
            F+PEG + Q+ +A +A+  GS +I +   +GVVL  E+R  SPL+      KI  + +H+   M+GL+ D R ++ + R  AQ HWF Y E + L ++   +S +                                      GD +A   +EG  +R FGV  LF G  ++ + P+L                         + + PSG F+ + A+AIG G E A+  LE  Y   M+L    + A+ +   V+                ++    N+E+A +T D + R   K   +  +++++
Sbjct:   15 FSPEGRLFQVEYAIEAIKLGSTAIGIRTSEGVVLAVEKRITSPLMEPSSVEKIVEVDRHIGCAMSGLIADSRTMIDKARVEAQNHWFTYNESISLESITQAVSNLALE----------------------------------FGDDDA---REGAMSRPFGVALLFGG--IDDKGPSL-------------------------FHLDPSGTFIEYDAKAIGSGSEGAQHALEEAYHKSMTLSEASKSALTILKQVM---------------EEKLNATNVELATVTADNHFRMHTKEELEALVQEIK 242          
BLAST of NO06G02060 vs. NCBI_GenBank
Match: XP_020904721.1 (proteasome subunit alpha type-5-like [Exaiptasia pallida])

HSP 1 Score: 104.4 bits (259), Expect = 8.200e-19
Identity = 76/307 (24.76%), Postives = 130/307 (42.35%), Query Frame = 0
Query:   57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLV-VGPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQLR 363
            F+PEG + Q+ +A +A+  GS +I +   +GVVL  E+R  SPL+      KI  + +H+   M+GL+ D R ++ + R  AQ HWF Y E + L ++   +S +                                      GD +A   +EG  +R FGV  LF G  ++ + P+L                         + + PSG F+ + A+AIG G E A+  LE  Y   M+L    + A+ +   V+                ++    N+E+A +T D + R   K   +  +++++
Sbjct:   85 FSPEGRLFQVEYAIEAIKLGSTAIGIRTSEGVVLAVEKRITSPLMEPSSVEKIVEVDRHIGCAMSGLIADSRTMIDKARVEAQNHWFTYNESISLESITQAVSNLALE----------------------------------FGDDDA---REGAMSRPFGVALLFGG--IDDKGPSL-------------------------FHLDPSGTFIEYDAKAIGSGSEGAQHALEEAYHKSMTLSEASKSALTILKQVM---------------EEKLNATNVELATVTADNHFRMHTKEELEALVQEIK 312          
BLAST of NO06G02060 vs. NCBI_GenBank
Match: XP_022784486.1 (proteasome subunit alpha type-5-like [Stylophora pistillata] >PFX29337.1 Proteasome subunit alpha type-5 [Stylophora pistillata])

HSP 1 Score: 104.4 bits (259), Expect = 8.200e-19
Identity = 85/309 (27.51%), Postives = 133/309 (43.04%), Query Frame = 0
Query:   57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVVGPT--PKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSL-EACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQLR 363
            F+PEG + Q+ +A +A+  GS +I +   +GVVL  E+R  SPL + PT   KI  +  H+   M+GL+ D R +V + R  AQ HWF Y E++ + ++   +S +                                      GD +A   +EG  +R FGV  LF G  V+ + P L                         Y + PSG F ++ A+AIG G E A+  LE  Y   M+L EACK  A+ +   V+                ++    N+E+   T D N R F K   +  +++++
Sbjct:   15 FSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRITSPL-MEPTSVEKIVEIDSHIGCAMSGLIADSRTMVDKARVEAQNHWFTYNEKMSVESVTQAVSNLALE----------------------------------FGDDDA---REGAMSRPFGVALLFGG--VDAKGPQL-------------------------YHLDPSGTFFQYDAKAIGSGSEGAQQALEEVYHKSMTLREACKS-ALTILKQVM---------------EEKLNATNVELGTSTPDKNFRMFTKEEIETLVQEIK 242          
BLAST of NO06G02060 vs. NCBI_GenBank
Match: XP_001747531.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ87611.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 104.0 bits (258), Expect = 1.100e-18
Identity = 83/312 (26.60%), Postives = 131/312 (41.99%), Query Frame = 0
Query:   57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLV-VGPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQLRGRVSE 368
            F+PEG I Q+ +A +A+  GS +I +  K+GV++  E+R  SPL+      KI  +  H+A  M+GL  D R L+ R R  AQ +WF Y E + + ++   +  +                                         E E  + G  +R FGV  LFAG +                 EG + R        V+Y   PSG F+R+ A+AIG G + A++ L+ +Y   MS    + LA+     V+                +  T +N+E+A +  D   +PF    S EE+  +  R+ E
Sbjct:   15 FSPEGRIFQVEYAIEAIKLGSTAIGIQTKEGVIIAVEKRITSPLMDPSSIEKIVEIDSHIACAMSGLTADARTLIERARVEAQNYWFTYNEPMSVESVTQAVCNLAMQF------------------------------------GEGEDAESGSMSRPFGVALLFAGVDT----------------EGTDKRP-------VLYHADPSGTFIRFDAKAIGSGSQGAQSTLQEKYDATMSFADAETLALSTLKQVM---------------EEVITSKNVEVAAVKAD---KPF-HLYSKEEVEAILQRLEE 248          
BLAST of NO06G02060 vs. NCBI_GenBank
Match: XP_011447862.1 (PREDICTED: proteasome subunit alpha type-5-like [Crassostrea gigas])

HSP 1 Score: 103.2 bits (256), Expect = 1.800e-18
Identity = 81/307 (26.38%), Postives = 132/307 (43.00%), Query Frame = 0
Query:   57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLV-VGPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSL-EACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQL 362
            F+PEG + Q+ +A +A+  GS +I +   +GVVL  E+R  SPL+      K+  +  H+A  M+GL+ D R L+ R R  AQ HWF Y  ++ + ++   +S +                                      GD +A+    G  +R FGV  LFAG  ++ + P L                         Y M PSG F+++ A+AIG G E A+  L+  Y   M+L EACK  A+ +   V+     S+               N+EM  +T++     F K+  ++ ++ +
Sbjct:   15 FSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRVTSPLIEASSIEKVFEVDDHIACAMSGLIADSRTLIDRARVEAQNHWFTYNAKMSVESVTQAVSNLALQ----------------------------------FGDDDAD---PGAMSRPFGVALLFAG--IDNKGPQL-------------------------YHMDPSGTFIQYDAKAIGSGSEGAQQALQDTYHKSMTLKEACKS-ALTILKQVMEEKLNSS---------------NVEMGTVTKEKKYHMFSKQELEDVIKDI 241          
BLAST of NO06G02060 vs. NCBI_GenBank
Match: KRZ09209.1 (Proteasome subunit alpha type-5, partial [Trichinella zimbabwensis] >KRZ74198.1 Proteasome subunit alpha type-5, partial [Trichinella papuae])

HSP 1 Score: 103.2 bits (256), Expect = 1.800e-18
Identity = 80/306 (26.14%), Postives = 133/306 (43.46%), Query Frame = 0
Query:   57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVV-GPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQL 362
            F+PEG + Q+ +A +A+  GS +I +  +DGV+L+ E+R  S L++     KI ++  H+    +GL+ D R LV R R  A  +WF YG+++ +  +   ++ +                                      GD +AE       +R FGV  LFAG +                R G ++           Y M PSG F++  A+AIG G E A+  L+ +Y  +MSL   K+LA+ +   V+                ++ T  N+E+A +T+D       + LS +E+  L
Sbjct:   17 FSPEGRLFQVEYAIEAIKLGSTAIGILTRDGVLLVCEKRITSTLMIPSSVEKIMKIDNHIGCTTSGLIGDTRTLVDRARVEAANYWFYYGDKITVEGVTQAVANLALE----------------------------------FGDDDAEAAM----SRPFGVAVLFAGYD----------------RYGPQL-----------YNMDPSGTFIQCQAKAIGSGCESAQQALQEKYEANMSLLEAKKLAISILKQVM---------------EEKITSTNIEIATVTKDSG----FEILSKDEVENL 238          
BLAST of NO06G02060 vs. NCBI_GenBank
Match: XP_005538150.1 (20S core proteasome subunit alpha 5 [Cyanidioschyzon merolae strain 10D] >BAM82114.1 20S core proteasome subunit alpha 5 [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 102.8 bits (255), Expect = 2.400e-18
Identity = 85/294 (28.91%), Postives = 122/294 (41.50%), Query Frame = 0
Query:   57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVVGPT-PKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPF 350
            F+PEG + Q+ +A +A+  GS ++ +   DGVVL  E+R  SPL+   +  KI  +  H+   M+GL  D R LV+  R  AQ H F Y E        M +  V  +    A R G++G                                  + +R FGV  L AG   +   PAL                         Y   PSG + RW A+AIG GGE A+ +LE RYR D+SL   + +A+QV   V+                ++   +N+EMA +  DG    F
Sbjct:   15 FSPEGRLFQVEYALEAIKLGSTAVGIQCADGVVLAVEKRVTSPLIEPRSIEKIVEIDTHICATMSGLTADARTLVQHARTEAQNHRFNYEEP-------MPVESVAQAVCDLALRFGESG--------YXXXXXXXXXXXXXXXXXXXXXNNAPVMSRPFGVALLLAG--CDERGPAL-------------------------YTTDPSGTYTRWLAKAIGAGGESAQVVLEERYRRDLSLAEAEAIALQVLRQVM---------------EEKLGAKNIEMARVVPDGKSGRF 251          
BLAST of NO06G02060 vs. NCBI_GenBank
Match: KRY49967.1 (Proteasome subunit alpha type-5 [Trichinella britovi])

HSP 1 Score: 102.8 bits (255), Expect = 2.400e-18
Identity = 82/305 (26.89%), Postives = 134/305 (43.93%), Query Frame = 0
Query:   57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVV-GPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQ 361
            F+PEG + Q+ +A +A+  GS +I ++ ++GV+L+ E+R  S L+V     KI ++  H+    +GL+ D R LV R R  A  +WF YG+++ +  +   ++ +                                      GD +AE       +R FGV  LFAG    C+            R G ++           Y M PSG F++  A+AIG G E A+  L+ +Y  +MSL   K+LA+ +   V+                ++ T  N+E+A +T+D     F     DE+L Q
Sbjct:   37 FSPEGRLFQVEYAIEAIKLGSTAIGISTREGVLLVCEKRITSTLMVPSSVEKIMKIDNHIGCTTSGLIGDTRTLVDRARVEAANYWFYYGDKITVEGVTQAVANLALE----------------------------------FGDDDAEAAM----SRPFGVAVLFAG----CD------------RYGPQL-----------YNMDPSGTFIQCQAKAIGSGCESAQQALQEKYDANMSLLEAKKLAISILKQVM---------------EEKITSTNIEIATVTQDSG---FAILSKDEQLFQ 258          
The following BLAST results are available for this feature:
BLAST of NO06G02060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26245.14.400e-11365.62proteasome alpha5 isoform a [Nannochloropsis gadit... [more]
XP_014767927.11.500e-2027.03PREDICTED: proteasome subunit alpha type-5-like [O... [more]
KXJ11829.18.200e-1924.76Proteasome subunit alpha type-5 [Exaiptasia pallid... [more]
XP_020904721.18.200e-1924.76proteasome subunit alpha type-5-like [Exaiptasia p... [more]
XP_022784486.18.200e-1927.51proteasome subunit alpha type-5-like [Stylophora p... [more]
XP_001747531.11.100e-1826.60hypothetical protein [Monosiga brevicollis MX1] >E... [more]
XP_011447862.11.800e-1826.38PREDICTED: proteasome subunit alpha type-5-like [C... [more]
KRZ09209.11.800e-1826.14Proteasome subunit alpha type-5, partial [Trichine... [more]
XP_005538150.12.400e-1828.9120S core proteasome subunit alpha 5 [Cyanidioschyz... [more]
KRY49967.12.400e-1826.89Proteasome subunit alpha type-5 [Trichinella brito... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000255NSK000255Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02060.1NO06G02060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597227gene_6517Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100025g30gene4302Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02060.1NO06G02060.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02060 ID=NO06G02060|Name=NO06G02060|organism=Nannochloropsis oceanica|type=gene|length=1536bp
AGGAAGAGCCAGACGACGGTAAAGGCAAGGACAAGGGGCCGAGGGCAAGC
CAAGGCCTCCTTGTCAACCTCGACCTCCCCGCTTTTCTACCCCTCGGATG
GTGATGCGGGGTTGTAGTCCGCCAACTGGGCCACCATGCTGTGTCTTCCT
TCTCGTCGCCCTCCTCACCATTTGCCTAATCTCTCCTCTCCCCACCGTCC
ACGCTGCCGTCGAAGGGGCGAGCACAGGCGGTCGTCGAGTTGTGGAAGTC
TACCACCCTTTCCCCTTCACGCCCGAAGGCCTCATCCGCCAGCTGACCCA
TGCCCAGCAAGCCGTCAACAAAGGTAGCCTCTCCATTGCTTTGGCAGCGA
AAGACGGTGTCGTCCTTATTGGGGAACGCCGGGATTTATCTCCACTCGTC
GTGGGTCCCACGCCTAAGATTGGGAGATTAGCTCAGCATGTGGCATACGT
AATGGCAGGCCTCGTGCCGGATGGCCGTTATCTGGTGCGACGTGGACGGG
CCTTGGCGCAAAAACACTGGTTTGAATACGGAGAGGAAGTGGGATTACCT
GCTTTGTTAATGGAGCTGAGCAAAGTCGTGACTTCGGCACATTATCGAGC
CCCGCGCGAGGGGAAGACTGGAGGCAACAAGGGAGAGAAGAGTAGTAGTT
TTTTTGAGGAAATTCGGTCGAGGCCATCTGTGGACCCCATAGGGGATGCT
GAAGCCGAGGTTCGGAAGGAGGGACTGCCTGCGAGACATTTCGGGGTTGG
GTTTTTGTTTGCGGGGCCGGAGGTCGAGTGTGAGGCGCCGGCGCTGTTAG
AGCCTCTTGTTGAAGGAGGGAGGGAGGGCGAGGAAATGAGGAAGGACGGG
GTCTACCCACCATGGGTGGTATATGAAATGGGACCTTCGGGGCTATTCGT
CCGGTGGTCGGCCAGGGCGATTGGGGAGGGAGGGGAACAGGCGGAGGCTT
TGTTGGAAGCGAGATATCGACCGGATATGAGCTTAGAGGCGTGTAAACGG
CTTGCGGTTCAAGTGTGTGACACGGTGTTGGCCGCCTCCTCTCCCTCTGC
TCCGCTTCCTTCCTCCTTCACGGCGAGGCAGGAGGAGACAATAGAGAATT
TGGAGATGGCGTGTTTAACGAGGGATGGAAATGGCCGGCCTTTCTTGAAA
CGGTTGTCAGATGAGGAGCTGAGGCAGTTACGGGGAAGGGTCAGTGAGAC
GATGGGGTTGGTGGAAGCCACCACCACCACCACATCCTCCTCCTCTTAAT
TATCCTCTATATACTCCTCCACCTTCTCGTCCTACTCCTTCCCCCCTCAC
CATCTGGTTGATGATTCACCATGTAAATAGTCTTCGAGATGCAGGGATAA
AGGTAGCACTGACAAATGCCTTGAGAAGCATCCGTTAAATACAAATTACC
ATCAATATAAATGCAAAATTAAGATGAACGAGCCAGTAAAATTCATTCTG
ACCCACACCCGCCCAGCCTCTAAAATGTCACCGCGGAAGATAAAGTAATG
GTGAAGAAATGAAACAGAAGCACATCACTCGTGACT
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protein sequence of NO06G02060.1

>NO06G02060.1-protein ID=NO06G02060.1-protein|Name=NO06G02060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=384bp
MVMRGCSPPTGPPCCVFLLVALLTICLISPLPTVHAAVEGASTGGRRVVE
VYHPFPFTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPL
VVGPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGL
PALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGD
AEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKD
GVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACK
RLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFL
KRLSDEELRQLRGRVSETMGLVEATTTTTSSSS*
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