NO06G01670, NO06G01670 (gene) Nannochloropsis oceanica

Overview
NameNO06G01670
Unique NameNO06G01670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2208
Alignment locationchr6:518423..520630 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:518423..520630 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G01670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR057ncniR057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01670.1NO06G01670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01670.1NO06G01670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01670 ID=NO06G01670|Name=NO06G01670|organism=Nannochloropsis oceanica|type=gene|length=2208bp
ATGAAGGTATCAGCAGCAGCAGTGAGAAAGAATGAGCCGCGGTTGAATGA
AATCTTTGCCACGGGCAAGAGACAGTGGGTAGAGCAGGGAAAGGAGCAGC
AGCAGCAGCAGGTGCAGCAGCAACAACAACAACGGCAGCACGACCATGAG
AGGATGGTGGTTGATATGCATGGGGATGGGTCGGAAACTGATTCTGATGG
CGACGAGGACGACATATTGGCCGACCATATCGGCGACGCGTGCAAGAAGC
AGCAGCAGCAGCAGGAGAAGGAGGGGCACAGAGATAGGAAAGGGGGGGGG
GAAGTAGGAGAAGGAAACGGAGAAGGAGGAGGGGGGGCTAAAGGTGTAGT
TGTGGTGGGTCCAATGCTCGCGTTTTTGAAACCGAACGTGGAGGAGGGTG
GAGGAGGGAGTGAAGGGAGAGGGGGAGGAGGAGGAGGAGTAGGAGGAGGG
AACAAGATGAAGTCGGTTAGCGGCAGTAGCAAGAGCAGCTACAGCAGCAG
CTTTTTCAGTAAAGAGGGGGGGCTACCACCATTACTTTTTCAATCAGCGT
CTGAAACGGAGGACGAGGAGGATGAGTTGCAGTGGTATCGTCCTTCTCGA
AGGGTGAGCACCAGCAGCACCAGCACCAGCACCAGCAATAGCACCAGCGC
CAGCGCCAGCAGCAGGAGGGATAGTAGTCAGAGGGTGGTCATGGCGTGGC
AGCATCCATTGTACCGGCCTGAGGATGTCTTGACCCCTAGTGCTGCTGCT
CCTGCTGCGTCGCGGGGCAGCGGGCGATGGAAGAAGAAGGGTGGTAGGGA
GAACGAGGAAAAGCAGGAGGAGGAAGAGCAGGAGACAAGGGGGGGAGCTT
CGTTGTTGGTGTCAGGGGTAGCAGCAGCAGCAGCAGGAGCAGCAGCAGCA
GCAGACGAGGAGGCAGGTGTGACGTGTCAGGAAGAGGATACCGAAGAAGG
GAGGGAAGAGGAGGAGGAAGGAAGGAGGAAATCACGGAACCACCAAATGA
GGCTCTCGGTCAATTCCACCCTTGATATGAAGGCGACACCACTGGCCATC
CATTCATCCCTCCTTCCCTCTCCGACTCTTTCTTCTTCTCCTCCTCCTCC
TCCTCCTCATTTTTCTACTCTTTCCAACTTTCAAGTGCAGTTGGAGGAGG
GTGATGAGGACGACGACGAGGACGACGACGAGGACGACGACGAGGACGAC
GACGAGGACAAGGAGGAGAAGCAGCAACAGAACCCGAATTTGTCCATGAT
GTCTTCCACAAAGGACAGAAGGCAGCAGGAAGAGGAGGGGGTAGAAGAGG
GGGAGGGGGAGGGGGAGGACAAGGACAAGGACAAGGAGGAGGACGAGGAC
GAGGACGAGGACGAGGACGAGGACGAGGACGAGGAGGAAAGCAGTGAAGT
CGAGAACGAGGAACACGGAAGCGGGCGCAGAATTGGGGAATGGGGAGAAG
AGATAGAGGATGATGAAAGTAGCGAGGAGGAAGAAGAGGACGAGGAAGAG
GACAAAGAGGAGAGAGGGAGGAGGAAGAGGTTGCGCAGCGGTGCTTTAGT
GGGCGAGAGCGGCAGCAATAAAAGAAGGGAGAAGAAGAAAAATAGCGTGG
GTCCTGATTTTGTGATTCACGATTTGACTTTAAATGATGAGGACGAGGAG
GACGAGGACGAGGAGGATGACATCAAGGCTTTTTCGGACGATGATGAGAA
TGGTGGTTATGGGATAAAGGGGGGAGGGAATGAACGCGTGAAGCCACACC
GGCTGCGAGGATCTAACGGTTGGATAAAGCCGGACTACCCTGAGGTGCTT
CCTCACTTCCGGTCTATTGACAGGTTGAAGGAGGCAGGGATGGAGATTGT
AGACTTCGACTCGATTGGAGGAGGGGGAGGAAGAGAGGGAGGGAAGGGTG
GTGGAAAAGGGGGAGGAGGAGGTGTAATTGATCGACGATATGAGGAACGG
AGGAGGAGGCGGGAGGCCAAGGCGAAAAAGGAAGCGGCGAGCAAGAAGAG
GAGGAAGGGGGGGAAGAAGGGGCAGAGGGGGGAGGGAGGGTGGCGCGGGC
TTGGCAGGGGAGAAGGAAAGCGGTATAGGAGGGATGAGGTGGGAGAGAGG
GAGGGAGACAGTGAGGGAGGGAGGGAGGGACAGAGCAAGGGACGGAGGGA
AGCAGGGACAGAGGGAGGGATGGACATACAAGAACCAGCCCGTACGAGAG
GCACCTAG
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protein sequence of NO06G01670.1

>NO06G01670.1-protein ID=NO06G01670.1-protein|Name=NO06G01670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=736bp
MKVSAAAVRKNEPRLNEIFATGKRQWVEQGKEQQQQQVQQQQQQRQHDHE
RMVVDMHGDGSETDSDGDEDDILADHIGDACKKQQQQQEKEGHRDRKGGG
EVGEGNGEGGGGAKGVVVVGPMLAFLKPNVEEGGGGSEGRGGGGGGVGGG
NKMKSVSGSSKSSYSSSFFSKEGGLPPLLFQSASETEDEEDELQWYRPSR
RVSTSSTSTSTSNSTSASASSRRDSSQRVVMAWQHPLYRPEDVLTPSAAA
PAASRGSGRWKKKGGRENEEKQEEEEQETRGGASLLVSGVAAAAAGAAAA
ADEEAGVTCQEEDTEEGREEEEEGRRKSRNHQMRLSVNSTLDMKATPLAI
HSSLLPSPTLSSSPPPPPPHFSTLSNFQVQLEEGDEDDDEDDDEDDDEDD
DEDKEEKQQQNPNLSMMSSTKDRRQQEEEGVEEGEGEGEDKDKDKEEDED
EDEDEDEDEDEEESSEVENEEHGSGRRIGEWGEEIEDDESSEEEEEDEEE
DKEERGRRKRLRSGALVGESGSNKRREKKKNSVGPDFVIHDLTLNDEDEE
DEDEEDDIKAFSDDDENGGYGIKGGGNERVKPHRLRGSNGWIKPDYPEVL
PHFRSIDRLKEAGMEIVDFDSIGGGGGREGGKGGGKGGGGGVIDRRYEER
RRRREAKAKKEAASKKRRKGGKKGQRGEGGWRGLGRGEGKRYRRDEVGER
EGDSEGGREGQSKGRREAGTEGGMDIQEPARTRGT*
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Synonyms
Publications