NO06G01460, NO06G01460 (gene) Nannochloropsis oceanica

Overview
NameNO06G01460
Unique NameNO06G01460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2679
Alignment locationchr6:463702..466380 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:463702..466380 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO06G01460 vs. NCBI_GenBank
Match: EWM26194.1 (hypothetical protein Naga_100072g8 [Nannochloropsis gaditana])

HSP 1 Score: 613.2 bits (1580), Expect = 9.400e-172
Identity = 354/552 (64.13%), Postives = 427/552 (77.36%), Query Frame = 0 
Query:  131 ENEDDNMILDMDLEHDEEMLQAMRKAIQQQTTAEPQVRRWTLGIGTIGKAMQRQQQHQQLNSMQSSRAGGSLDTAAATAKNMLGAPTLIKQLETVLTDIESLSSSVTASATSPLNGALPLSPKRKVTLFSRKTGEKKRLIEKYKAHLLTLEGERKSLSDKLKKASATGGVALGMLKQEWTTAQLEISRKVRELEKAQDLMGRHEAESTQLRTTVTSLRRQIEELHMNRA-----GPSEQQQQKEGMLSHDGSPAMVSASSTPLICTPTTGTS-------------QEVIAKDGERLAELEIELDLAYGKLEALSMQQNHTKDRSAGLVNRLQGEIREAKAALVARVKKHTEVKERCRQLEEELGASVGQIEAVKHQMELRVGKIEERLKESMREALENERTAKNALFKRQQAEEEMDRLREQYDVLVGQFEAIRSQVELEKMEAKGTVAKYEKELEDVYGKLNAKDEYAGLLCGVRKDMDSEMTDLWTQMDLAEEKRVKLEEAFVTLGNRYRAASARRLFNFMVRQHNNRLRETLIILKKNAKAPPMEADMP 665
            +++ D   L MD EHDEEM++AMR    Q+  A PQV RWT GIGTI K MQRQ QHQQL   Q +    +   AA TAK +LG PTL+KQLE V T+IE +SS+ ++   SP       SP R+ + F  + GEKKRLIEKYKA L  LEGERK  S++++KA  TGGVALGMLK+EWT   ++  RK RELEK Q+L+GRHEAESTQLR TV+ LRRQ+EEL +NRA     G  + +Q++E +LS   SP MVSA+S+P+       TS             +E++  D  RLA+LE+ELDLAYGKLEALS+QQ +++D+S G++ +L+GE++E K AL ARVKKHTE+KERCRQLE ELGASVGQIEAVKHQMELRV K+E+RLKESMREALENERTAKNALFKRQQ EEEM+RLREQ+DVLVGQFEAIRSQVELEK+EA+G V KYEKELE+VYGKLNAKDEYAGLLCGVR+DMDSEMTDLW+Q+D AEEKR K+EEAFV LGN++RAASARRLFNFMV Q   RLRE+LIILKKN+KAP ++AD+P
Sbjct:   47 DSDGDEEALIMDDEHDEEMIEAMRCTALQRKQATPQVSRWTSGIGTIAKDMQRQHQHQQL---QGNLEVSATSVAATTAKILLGPPTLMKQLEAVFTEIEHISSTRSSHTVSPKGKTGLASPLRQSSWFGTRKGEKKRLIEKYKAQLAALEGERKEASEEMRKAIQTGGVALGMLKEEWTRTDIDTLRKARELEKVQELLGRHEAESTQLRITVSGLRRQVEEL-VNRAQSVPRGSQDDEQKEEELLS--DSPLMVSATSSPIQECSVRETSAKTSSPPASSEMGKELVVNDA-RLAQLEMELDLAYGKLEALSLQQCYSQDKSTGVLQQLRGELKETKLALAARVKKHTEMKERCRQLEGELGASVGQIEAVKHQMELRVAKMEDRLKESMREALENERTAKNALFKRQQVEEEMERLREQHDVLVGQFEAIRSQVELEKLEAQGVVTKYEKELEEVYGKLNAKDEYAGLLCGVRQDMDSEMTDLWSQVDAAEEKRAKVEEAFVALGNKFRAASARRLFNFMVAQQRCRLRESLIILKKNSKAPLLQADVP 591
The following BLAST results are available for this feature:
BLAST of NO06G01460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26194.19.400e-17264.13hypothetical protein Naga_100072g8 [Nannochloropsi... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000306NSK000306Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01460.1NO06G01460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100072g8gene4344Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01460.1NO06G01460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01460 ID=NO06G01460|Name=NO06G01460|organism=Nannochloropsis oceanica|type=gene|length=2679bp
AACCACAGGGGGCGCCCCCCTTACATACGCCGCTGAGACTTCAAGGGCAG
AAGTCATTCTTCAAAGCCGGAAGTCCCTCCCAACCAAATGGCCATGCCGG
AGGAGCTTACCAACACAGGTAGCATGAAAGACACAGGGGCTGAGCTAAAC
ATGCTGATGCAGCAGCTGAAAAATAATGTGTTGAAAGACAAGCATACTTT
GACTGGGGCGGGCCGgtacgtgtgtgtgggggcattgtgaggggagggat
gaaagggcggcgaaacccctcctcacacagtgcaagccattggacaatag
gtatacgatatgcggatttcgtctttttatacgaaagaacaccagtaaag
gtcatgtatatggcgaaaatcccccgcctgcctcatttaaagtcgaatga
actataccaaagctcactcgctgccatcctctactcactaactcctcccc
ccttgattccgcatctgccctcgaatttaaatcagACCCGAGGAAGATCT
GGCCAGGAAAATTATTCAGAAGAACGCTCTTGTGATCGGTAAGGACGAAG
AGGGGGAAGACTCCGCCGACGCTGCTTACTTTTCTTCCGAGACAGGCAGT
CAGATGGGGGGATATGATTCTGATTACTCCGAGGTGGACAGCAGCATGCA
CTTCGACAATGGAGAGGAGGGTGAGGGAGCGGAAGTCATTGAAAAGGATC
AAGTGGAGCGCTTGGTCGGGAATGGGAAAGAGGGGGAGAGCGGGATGGAG
AACGAAGACGATAACATGATTTTGGACATGGATCTGGAGCACGACGAGGA
GATGCTGCAAGCTATGCGCAAAGCCATCCAACAGCAAACGACGGCTGAGC
CTCAAGTACGCCGGTGGACACTAGGGATCGGCACAATTGGGAAGGCGATG
CAACGGCAACAGCAGCACCAGCAGCTTAACTCGATGCAAAGCTCGCGTGC
GGGTGGAAGCTTGGACACTGCTGCTGCGACGGCAAAGAACATGCTTGGGG
CCCCTACCCTGATAAAGCAGCTTGAGACGGTCTTGACAGACATTGAGAGC
TTATCCAGTAGTGTTACTGCTTCCGCGACATCTCCGCTAAATGGGGCCCT
CCCTCTGAGCCCGAAGCGGAAAGTGACGTTGTTTAGTCGGAAGACGGGAG
AGAAGAAGCGCTTAATCGAAAAATACAAGGCGCATCTCCTGACGTTAGAA
GGAGAGAGAAAGTCTTTGTCAGATAAGCTAAAAAAAGCATCGGCGACAGG
GGGGGTGGCCCTGGGGATGCTCAAACAAGAGTGGACGACGGCGCAGCTGG
AGATCTCGCGGAAGGTGCGGGAGTTGGAGAAGGCCCAGGATTTAATGGGC
CGACATGAAGCAGAGAGCACCCAGCTCCGGACCACCGTCACGAGCCTCCG
TCGTCAAATCGAAGAATTGCACATGAACCGCGCAGGTCCTTCCGAGCAGC
AGCAGCAGAAGGAGGGAATGTTGTCCCATGACGGATCTCCTGCTATGGTG
TCGGCATCGAGCACCCCTCTAATCTGCACCCCTACCACTGGTACAAGTCA
AGAGGTAATTGCTAAGGATGGGGAAAGGCTAGCAGAACTTGAAATAGAGC
TAGACCTGGCCTATGGGAAGTTGGAAGCATTAAGCATGCAGCAAAACCAT
ACCAAGGACAGAAGCGCTGGGTTGGTAAATCGCCTGCAGGGGGAAATAAG
AGAGGCTAAAGCGGCCTTGGTAGCACGGGTTAAGAAGCACACGGAGGTTA
AGGAGAGATGTCGGCAGCTAGAGGAGGAATTGGGTGCATCCGTGGGACAG
ATCGAGGCGGTAAAGCATCAGATGGAGCTGAGGGTGGGGAAGATAGAGGA
GAGATTGAAAGAGAGTATGAGGGAGGCCTTGGAGAATGAACGGACAGCAA
AAAATGCCTTGTTTAAACGACAACAGGCGGAGGAGGAAATGGACCGTTTG
AGAGAGCAGTACGACGTGCTTGTGGGTCAGTTTGAGGCGATTCGATCGCA
GGTGGAGCTGGAGAAGATGGAGGCAAAAGGGACAGTTGCAAAGTACGAGA
AGGAGCTAGAGGACGTCTACGGGAAGTTGAATGCCAAGGACGAGTATGCA
GGATTATTGTGTGGGGTGAGAAAAGATATGGATTCCGAAATGACGGACTT
GTGGACCCAGATGGACCTGGCAGAGGAGAAGAGGGTGAAATTGGAGGAGG
CATTTGTGACGTTGGGAAATCGGTATCGTGCGGCGTCGGCAAGACGATTA
TTTAATTTCATGGTGAGACAGCATAACAATAGGTTGAGAGAGACGTTAAT
TATTTTGAAGAAAAATGCCAAGGCGCCACCGATGGAGGCAGATATGCCGT
AGGTGGGTAGGAGTGCAAAAAGGGAATAGTGGGGAGAGAGAATGATAAAA
AACGGGGAAAAAATGCTAATATATTTATTTGGGATTGAGATCAAAGTGTA
GAATTAGATATCTCCTTATGATTTGTATCAGATCTTAGAATTGAATCTTT
GACATGAAGAATTAAGGGAAAATAGCAGGACACGTGTCTGGTAGAAAAGG
GGAGAGTGGCCGGCGTATGCGAAGAGCAAGAGGAAAGGGGCTCGTGTGCG
CTTTTGTACAAACATGATTTTACACCTTTAAAAGGAAGGCACATTTAAGC
AAGAAAGAAGGAAGATACAAATGACGCCT
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protein sequence of NO06G01460.1

>NO06G01460.1-protein ID=NO06G01460.1-protein|Name=NO06G01460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=665bp
MAMPEELTNTGSMKDTGAELNMLMQQLKNNVLKDKHTLTGAGRPEEDLAR
KIIQKNALVIGKDEEGEDSADAAYFSSETGSQMGGYDSDYSEVDSSMHFD
NGEEGEGAEVIEKDQVERLVGNGKEGESGMENEDDNMILDMDLEHDEEML
QAMRKAIQQQTTAEPQVRRWTLGIGTIGKAMQRQQQHQQLNSMQSSRAGG
SLDTAAATAKNMLGAPTLIKQLETVLTDIESLSSSVTASATSPLNGALPL
SPKRKVTLFSRKTGEKKRLIEKYKAHLLTLEGERKSLSDKLKKASATGGV
ALGMLKQEWTTAQLEISRKVRELEKAQDLMGRHEAESTQLRTTVTSLRRQ
IEELHMNRAGPSEQQQQKEGMLSHDGSPAMVSASSTPLICTPTTGTSQEV
IAKDGERLAELEIELDLAYGKLEALSMQQNHTKDRSAGLVNRLQGEIREA
KAALVARVKKHTEVKERCRQLEEELGASVGQIEAVKHQMELRVGKIEERL
KESMREALENERTAKNALFKRQQAEEEMDRLREQYDVLVGQFEAIRSQVE
LEKMEAKGTVAKYEKELEDVYGKLNAKDEYAGLLCGVRKDMDSEMTDLWT
QMDLAEEKRVKLEEAFVTLGNRYRAASARRLFNFMVRQHNNRLRETLIIL
KKNAKAPPMEADMP*
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Synonyms
Publications